Update PEP8 & Remove licence

Rendrick27 · May 15, 2024 · 7247221 · 7247221
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commit 7247221
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Showing 25 changed files with 36 additions and 10,570 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -1,4 +1,3 @@
-# Use snakemake as base image
 FROM snakemake/snakemake:v8.11.4
 
 # Install requirements via conda
@@ -7,10 +6,9 @@ RUN mamba install conda-forge::biopython
 RUN mamba install -c bioconda -c conda-forge modeltest-ng=0.1.7
 RUN mamba install -c bioconda -c conda-forge raxml-ng=1.2.0
 
-# Install python packages to create the final phylo trees
+# Install python packages
 RUN pip install --force-reinstall -v "toyplot==1.0.3"
 RUN pip install --force-reinstall -v "toytree==2.0.1"
 
 WORKDIR /phylo_flow
-COPY . /phylo_flow
-
+COPY . /phylo_flow
diff --git a/LICENSE b/LICENSE
diff --git a/done/Trim/18S_rRNA.fasta b/done/Trim/18S_rRNA.fasta
diff --git a/done/Trim/28S_rRNA.fasta b/done/Trim/28S_rRNA.fasta
diff --git a/done/Trim/COI.fasta b/done/Trim/COI.fasta
diff --git a/done/Trim/ITS–2.fasta b/done/Trim/ITS–2.fasta
diff --git a/done/fasta/18S_rRNA.fasta b/done/fasta/18S_rRNA.fasta
diff --git a/done/fasta/28S_rRNA.fasta b/done/fasta/28S_rRNA.fasta
diff --git a/done/fasta/COI.fasta b/done/fasta/COI.fasta
diff --git a/done/fasta/ITS–2.fasta b/done/fasta/ITS–2.fasta