Merge pull request #629 from PyLops/dev

v2.4.0
PyLops · Dec 11, 2024 · 9964a04 · 9964a04
2 parents 7c58f0f + c37664b
commit 9964a04
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diff --git a/.github/workflows/build.yaml b/.github/workflows/build.yaml
@@ -24,7 +24,8 @@ jobs:
       run: |
         python -m pip install --upgrade pip setuptools
         pip install flake8 pytest
-        if [ -f requirements.txt ]; then pip install -r requirements-dev.txt; fi
+        pip install -r requirements-dev.txt
+        pip install -r requirements-torch.txt
     - name: Install pylops
       run: |
         python -m setuptools_scm

diff --git a/.github/workflows/codacy-coverage-reporter.yaml b/.github/workflows/codacy-coverage-reporter.yaml
@@ -26,7 +26,8 @@ jobs:
       run: |
         python -m pip install --upgrade pip
         pip install flake8 pytest
-        if [ -f requirements.txt ]; then pip install -r requirements-dev.txt; fi
+        pip install -r requirements-dev.txt
+        pip install -r requirements-torch.txt
     - name: Install pylops
       run: |
         pip install .

diff --git a/.gitignore b/.gitignore
@@ -17,6 +17,7 @@ build
 dist
 pylops.egg-info/
 .eggs/
+__pycache__
 
 # setuptools_scm generated  #
 pylops/version.py

diff --git a/.readthedocs.yaml b/.readthedocs.yaml
@@ -19,5 +19,6 @@ sphinx:
 python:
   install:
     - requirements: requirements-doc.txt
+    - requirements: requirements-torch.txt
     - method: pip
       path: .
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,11 +1,18 @@
 Changelog
 =========
 
+# 2.4.0
+* Added `pylops.signalprocessing.FourierRadon2d` and
+  `pylops.signalprocessing.FourierRadon3d` operators
+* Added `pylops.PyTensorOperator` operator
+* Added `pylops.ToCupy` operator
+* Added `pylops.utils.seismicevents.parabolic3d` method
+* Fix bug in `pylops.Restriction` when passing iava as cupy array
+
 # 2.3.1
-* Fixed bug in :py:mod:`pylops.utils.backend` (see [Issue #606](https://github.com/PyLops/pylops/issues/606))
+* Fixed bug in `pylops.utils.backend` (see [Issue #606](https://github.com/PyLops/pylops/issues/606))
 
 # 2.3.0
-
 * Added `pylops.JaxOperator`, `pylops.signalprocessing.DWTND`, and `pylops.signalprocessing.DTCWT` operators.
 * Added `updatesrc` method to `pylops.waveeqprocessing.AcousticWave2D`.
 * Added `verb` to `pylops.signalprocessing.Sliding1D.sliding1d_design`, `pylops.signalprocessing.Sliding2D.sliding2d_design`, `pylops.signalprocessing.Sliding3D.sliding3d_design`, `pylops.signalprocessing.Patch2D.patch2d_design`, and `pylops.signalprocessing.Patch3D.patch3d_design`.
@@ -29,7 +36,6 @@ is now unmantained and merged into `cupy`).
 
 
 # 2.2.0
-
 * Added `pylops.signalprocessing.NonStationaryConvolve3D` operator
 * Added nd-array capabilities to `pylops.basicoperators.Identity` and `pylops.basicoperators.Zero`
 * Added second implementation in `pylops.waveeqprocessing.BlendingContinuous` which is more

diff --git a/Makefile b/Makefile
@@ -21,7 +21,8 @@ install:
 
 dev-install:
 	make pipcheck
-	$(PIP) install -r requirements-dev.txt && $(PIP) install -e .
+	$(PIP) install -r requirements-dev.txt &&\
+	$(PIP) install -r requirements-torch.txt && $(PIP) install -e .
 
 install_conda:
 	conda env create -f environment.yml && conda activate pylops && pip install .

diff --git a/azure-pipelines.yml b/azure-pipelines.yml
@@ -61,6 +61,7 @@ jobs:
   - script: |
       python -m pip install --upgrade pip setuptools wheel django
       pip install -r requirements-dev.txt
+      pip install -r requirements-torch.txt
       pip install .
     displayName: 'Install prerequisites and library'
 
@@ -90,6 +91,7 @@ jobs:
   - script: |
       python -m pip install --upgrade pip setuptools wheel django
       pip install -r requirements-dev.txt
+      pip install -r requirements-torch.txt
       pip install .
     displayName: 'Install prerequisites and library'
 

diff --git a/docs/source/_static/cupy_diagram.png b/docs/source/_static/cupy_diagram.png
diff --git a/docs/source/_static/numpy_cupy_bd_diagram.png b/docs/source/_static/numpy_cupy_bd_diagram.png
diff --git a/docs/source/_static/numpy_cupy_vs_diagram.png b/docs/source/_static/numpy_cupy_vs_diagram.png
diff --git a/docs/source/api/index.rst b/docs/source/api/index.rst
@@ -28,6 +28,7 @@ Templates
     LinearOperator
     FunctionOperator
     MemoizeOperator
+    PyTensorOperator
     TorchOperator
     JaxOperator
 
@@ -62,6 +63,8 @@ Basic operators
     Real
     Imag
     Conj
+    ToCupy
+
 
 Smoothing and derivatives
 ~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -109,6 +112,8 @@ Signal processing
     Seislet
     Radon2D
     Radon3D
+    FourierRadon2D
+    FourierRadon3D
     ChirpRadon2D
     ChirpRadon3D
     Sliding1D

diff --git a/docs/source/api/others.rst b/docs/source/api/others.rst
@@ -118,6 +118,7 @@ Synthetics
     seismicevents.parabolic2d
     seismicevents.hyperbolic2d
     seismicevents.linear3d
+    seismicevents.parabolic3d
     seismicevents.hyperbolic3d
 
 .. currentmodule:: pylops.waveeqprocessing

diff --git a/docs/source/changelog.rst b/docs/source/changelog.rst
@@ -3,7 +3,19 @@
 Changelog
 =========
 
+Version 2.4.0
+-------------
+
+*Released on: 11/12/2024*
+
+* Added :py:class:`pylops.signalprocessing.FourierRadon2d` and 
+  :py:class:`pylops.signalprocessing.FourierRadon3d` operators
+* Added :py:class:`pylops.PyTensorOperator` operator
+* Added :py:class:`pylops.ToCupy` operator
+* Added :py:class:`pylops.utils.seismicevents.parabolic3d` method
+* Fix bug in :py:class:`pylops.Restriction` when passing iava as cupy array
 
+
 Version 2.3.1
 -------------
 
@@ -511,7 +523,7 @@ Version 1.3.0
 * Added :py:func:`pylops.optimization.sparsity.ISTA` and
   :py:func:`pylops.optimization.sparsity.FISTA` sparse solvers
 * Added possibility to broadcast (handle multi-dimensional arrays)
-  to :py:class:`pylops.Diagonal` and :py:func:`pylops..Restriction` operators
+  to :py:class:`pylops.Diagonal` and :py:class:`pylops.Restriction` operators
 * Added :py:class:`pylops.signalprocessing.Interp` operator
 * Added :py:class:`pylops.Spread` operator
 * Added :py:class:`pylops.signalprocessing.Radon2D` operator

diff --git a/docs/source/conf.py b/docs/source/conf.py
@@ -1,8 +1,10 @@
 # -*- coding: utf-8 -*-
-import sys
-import os
 import datetime
+import os
+import sys
+
 from sphinx_gallery.sorting import ExampleTitleSortKey
+
 from pylops import __version__
 
 # Sphinx needs to be able to import the package to use autodoc and get the version number
@@ -37,6 +39,8 @@
     "matplotlib": ("https://matplotlib.org/", None),
     "pyfftw": ("https://pyfftw.readthedocs.io/en/latest/", None),
     "spgl1": ("https://spgl1.readthedocs.io/en/latest/", None),
+    "pymc": ("https://www.pymc.io/", None),
+    "arviz": ("https://python.arviz.org/en/latest/", None),
 }
 
 # Generate autodoc stubs with summaries from code
@@ -103,9 +107,7 @@
 # These enable substitutions using |variable| in the rst files
 rst_epilog = """
 .. |year| replace:: {year}
-""".format(
-    year=year
-)
+""".format(year=year)
 html_static_path = ["_static"]
 html_last_updated_fmt = "%b %d, %Y"
 html_title = "PyLops"
@@ -122,15 +124,16 @@
 # Theme config
 html_theme = "pydata_sphinx_theme"
 html_theme_options = {
-    "logo_only": True,
-    "display_version": True,
+    "github_url": "https://github.com/PyLops/pylops",
+    # "logo_only": True,
+    # "display_version": True,
     "logo": {
         "image_light": "pylops_b.png",
         "image_dark": "pylops.png",
     }
 }
 html_css_files = [
-    'css/custom.css',
+    "css/custom.css",
 ]
 
 html_context = {