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HiFi-human-WGS-WDL v2.1.0 and v3 alpha #73

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  • update to TRGT v1.4.1
  • update to pbmm2 v1.16.99
  • add Sawfish v0.12.7

williamrowell and others added 9 commits August 23, 2024 13:12
sha256:c17eb8128b7ad4475b112ded81905b984c5630a1cbd4383c7bb08c523214a997
sha256:9d4988117ab424edea5585ccf716f3f27c6392144bba4fa1d94a118e48e98fad
sha256:db7d78f8e5b6e607cfdcf25c21cb244dfddf5a41a5cdfd1302ab7c7646a2abe1

- new discover option `--disable-path-canonicalization` required for WDL
- new joint-option `--report-supporting-reads` produces input for svtopo
0.12.7_build1: digest: sha256:fcd5d091908322ddeb2c86b7217b7cfdef9a103944adb3e87c76d495eb3fea5b
1.4.1_build1: digest: sha256:109134f94756b190f2ba8dad3ed9f1ce4b9048247f6fafc7a7c35daab07a91be
sha256:b58eef0645dd9adca850c9b4811f289ddcd57f630596d9f524701bc787467f30

Releases fixes behavior where `SA` tags were not stripped from aligned input.
@williamrowell williamrowell self-assigned this Jan 10, 2025
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