Version 2.36, Build 70; February 23, 2007

 - Added option to include 3+ fragmentation ions in the GetFragmentationMasses() function

FileIOFunctions.bas

@@ -1613,6 +1613,8 @@ On Error GoTo ParseFragModelSettingErrorHandler
     Case "FRAGMODELPHOSPHATELOSS": frmFragmentationModelling.chkPhosphateLoss = lngSettingInFile
     Case "FRAGMODELDOUBLECHARGE": frmFragmentationModelling.chkDoubleCharge = lngSettingInFile
     Case "FRAGMODELDOUBLECHARGETHRESHOLD": frmFragmentationModelling.cboDoubleCharge.ListIndex = lngSettingInFile
+    Case "FRAGMODELTRIPLECHARGE": frmFragmentationModelling.chkTripleCharge = lngSettingInFile
+    Case "FRAGMODELTRIPLECHARGETHRESHOLD": frmFragmentationModelling.cboTripleCharge.ListIndex = lngSettingInFile
     Case "FRAGMODELPRECURSORIONREMOVE": frmFragmentationModelling.chkRemovePrecursorIon = lngSettingInFile
     Case "FRAGMODELPRECURSORIONMASS": frmFragmentationModelling.txtPrecursorIonMass = strSettingInFile
     Case "FRAGMODELPRECURSORIONMASSWINDOW": frmFragmentationModelling.txtPrecursorMassWindow = strSettingInFile
@@ -2148,6 +2150,8 @@ On Error GoTo SaveSequenceInfoErrorHandler
         Print #SeqFileNum, "FragModelPhosphateLoss=" & CheckBoxToIntegerString(.chkPhosphateLoss)
         Print #SeqFileNum, "FragModelDoubleCharge=" & CheckBoxToIntegerString(.chkDoubleCharge)
         Print #SeqFileNum, "FragModelDoubleChargeThreshold=" & .cboDoubleCharge.ListIndex
+        Print #SeqFileNum, "FragModelTripleCharge=" & CheckBoxToIntegerString(.chkTripleCharge)
+        Print #SeqFileNum, "FragModelTripleChargeThreshold=" & .cboTripleCharge.ListIndex
         Print #SeqFileNum, "FragModelPrecursorIonRemove=" & CheckBoxToIntegerString(.chkRemovePrecursorIon)
         Print #SeqFileNum, "FragModelPrecursorIonMass=" & .txtPrecursorIonMass
         Print #SeqFileNum, "FragModelPrecursorIonMassWindow=" & .txtPrecursorMassWindow

MWTWIN.BAS

@@ -29,8 +29,8 @@ Option Explicit
 '   version 6.35
 
 ' *** Be sure to update version in Project | Properties also ***
-Public Const PROGRAM_VERSION = "6.42"
-Public Const PROGRAM_DATE = "November 5, 2006"
+Public Const PROGRAM_VERSION = "6.43"
+Public Const PROGRAM_DATE = "February 23, 2007"
 ' ***
 
 '
@@ -2841,7 +2841,9 @@ On Error GoTo SetDefaultValuesAndFormulasErrorHandler
         SetCheckBox .chkAmmoniaLoss, False
         SetCheckBox .chkPhosphateLoss, False
         SetCheckBox .chkDoubleCharge, False
+        SetCheckBox .chkTripleCharge, False
         .cboDoubleCharge.ListIndex = 8
+        .cboTripleCharge.ListIndex = 9
         SetCheckBox .chkRemovePrecursorIon, True
         .txtPrecursorIonMass = "300"
         .txtPrecursorMassWindow = "2"

MWT_ELEM.bak

@@ -1,4 +1,4 @@
-;       Elements File for MWTWIN program (v6.41)
+;       Elements File for MWTWIN program (v6.43)
 ;
 ; Comments may be added by preceding with a semicolon
 ; The heading [ELEMENTWEIGHTTYPE] 1 signifies that Average Elemental Weights are