Release V0.2.0 · PNNL-Comp-Mass-Spec/MSnSet.utils

What's Changed

Update peptide_significance_map and plot_peptide_position by @TylerSagendorf in #29
Major updates to PeCorA functions by @TylerSagendorf in #31
Rename pecora_msnset to brain_msnset by @TylerSagendorf in #32
Update ComBat_NA.R by @CamiloPosso in #33
Dev.parallel fix by @Ben-Drucker in #35
backtick names() issue fix by @vladpetyuk in #39
added turbo.colors new color scheme by @vladpetyuk in #42
addressing issue #43 by @vladpetyuk in #44
Update PeCorA Code by @TylerSagendorf in #45
Update function error handling by @TylerSagendorf in #52
Fix R CMD check core limit error on Mac by @TylerSagendorf in #55
Added a check to correct_batch_effect_NA by @CamiloPosso in #53
fix rownames compatibility between exprs and fData by @vladpetyuk in #57
adding confidence interval to AUC plot by @vladpetyuk in #59
ggplot version of plotAUC (checked out from ben-reproducibility) by @Ben-Drucker in #61
init ptm_significance_map by @skelly001 in #63
Update column names by @skelly001 in #51
Reproducibility by @Ben-Drucker in #37
fix seed argument and enable CI toggle by @skelly001 in #66
remove "Random Model" from legend by @skelly001 in #68
New plotting function, vignette, and clean up (dev.Ben branch) by @Ben-Drucker in #72
Develop damon by @vladpetyuk in #75
Added more algorithms to rrollup by @Ben-Drucker in #76
added number of PTMs sites into the feature name in multisite type of… by @vladpetyuk in #79
filtering out of multisites with not all sites localized by @vladpetyuk in #80

Full Changelog: v0.1.0...V0.2.0