Chore: adding umap to latest docker image

docker/cfchip_toolkit/latest

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+v0.5.0

docker/cfchip_toolkit/v0.5.0/Dockerfile

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+# Dockerfile for cfChIP Toolkit
+# https://www.nature.com/articles/s41587-020-00775-6
+# Uses Ubuntu Focal (20.04 LTS) as base image
+# https://github.com/OpenOmics/chrom-seek/commit/48c3903261fe1c5979b2f6b62beb03cbd62c7468
+FROM skchronicles/cfchip_toolkit:v0.4.0
+LABEL maintainer="Skyler Kuhn <kuhnsa@nih.gov>" \
+    base_image="skchronicles/cfchip_toolkit:v0.3.0" \
+    version="v0.5.0"   \
+    software="chrom-seek_cfchip_toolkit" \
+    about.summary="An awesome set of Epigenetic Pipeline" \
+    about.home="https://github.com/OpenOmics/chrom-seek" \
+    about.documentation="https://openomics.github.io/chrom-seek/" \
+    about.tags="cell-free ChIP-seq"
+
+############# OVERVIEW ##################
+# Adds the following packages:
+#  • R/4.X
+#    - umap              (CRAN)
+
+
+############### INSTALL #################
+# Extra packages for differential bind
+# analysis in the cfChIP pipeline 
+WORKDIR /opt2
+RUN Rscript -e 'install.packages(c("umap"), repos="http://cran.r-project.org")'
+
+
+################ POST ###################
+# Add Dockerfile and export env variables
+RUN mv /opt2/Dockerfile /opt2/cfchip_toolkit-v0.5.0.dockerfile
+ADD Dockerfile /opt2/Dockerfile
+RUN chmod -R a+rX /opt2 
+ENV PATH="/opt2:$PATH"
+WORKDIR /data2

docker/cfchip_toolkit/v0.5.0/README.md

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+## Steps for Building Docker Images
+
+Directly below are instructions for building a base image for the `cfchip_toolkit` using the provided Dockerfile:
+
+```bash
+# See listing of images on computer
+docker image ls
+
+# Build from Dockerfile
+docker build --no-cache -f Dockerfile --tag=cfchip_toolkit:v0.5.0 .
+
+# Testing, take a peek inside
+docker run -ti cfchip_toolkit:v0.5.0 /bin/bash
+
+# Updating Tag  before pushing to DockerHub
+docker tag cfchip_toolkit:v0.5.0 skchronicles/cfchip_toolkit:v0.5.0
+docker tag cfchip_toolkit:v0.5.0 skchronicles/cfchip_toolkit         # latest
+
+# Check out new tag(s)
+docker image ls
+
+# Push new tagged image to DockerHub
+docker push skchronicles/cfchip_toolkit:v0.5.0
+docker push skchronicles/cfchip_toolkit:latest
+```
+
+### Other Recommended Steps
+
+Scan your image for known vulnerabilities:
+
+```bash
+docker scan cfchip_toolkit:v0.5.0
+```
+
+> **Please Note**: Any references to `skchronicles` should be replaced your username if you would also like to push the image to a non-org account.