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Only export species independent parameters to spatial structure #2589

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msevestre opened this issue Apr 5, 2023 · 4 comments
Closed

Only export species independent parameters to spatial structure #2589

msevestre opened this issue Apr 5, 2023 · 4 comments
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@Yuri05

OneTimeSetUp: PKSim.Core.Services.CannotCreateSimulationException : Transport 'GallbladderEmptying' with path 'simulation|Neighborhoods|Gallbladder_Lumen_duo|C1|GallbladderEmptying' references an entity with path 'simulation|Organism|Gallbladder|Gallbladder ejection fraction' that cannot be found
Transport 'GallbladderEmptying' with path 'simulation|Neighborhoods|Gallbladder_Lumen_duo|C1|GallbladderEmptying' references an entity with path 'simulation|Organism|Gallbladder|Gallbladder ejection half-time' that cannot be found
Multiple Errors were found for 'GallbladderEmptying'
Transport 'PassiveDiffusionPlsToSaliva' with path 'simulation|Neighborhoods|Saliva_slv_Saliva_slv|C1|PassiveDiffusionPlsToSaliva' references an entity with path 'simulation|Organism|Saliva|SalivaGland|..|Saliva flow rate' that cannot be found

what could be the problem?

@msevestre msevestre self-assigned this Apr 5, 2023
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hum I think this is running before we create dynamic parameters in core

@msevestre msevestre mentioned this issue Apr 5, 2023
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@Yuri05
A bit stuck here

Multiple Warnings were found for 'Fraction of oral drug mass absorbed into mucosa segment'
Parameter 'GFR (specific)' with path 'simulation|Organism|Kidney|GFR (specific)' references an entity with path 'simulation|Organism|Kidney|GFRmat' that cannot be found
Parameter 'GFR (specific)' with path 'simulation|Organism|Kidney|GFR (specific)' references an entity with path 'simulation|Organism|Kidney|Hill coefficient for GFR' that cannot be found
Parameter 'GFR (specific)' with path 'simulation|Organism|Kidney|GFR (specific)' references an entity with path 'simulation|Organism|Kidney|TM50 for GFR' that cannot be found
Multiple Errors were found for 'GFR (specific)'
Parameter 'Renal aging scaling factor' with path 'simulation|Organism|Kidney|Renal aging scaling factor' references an entity with path 'simulation|Organism|Kidney|Age of aging onset' that cannot be found
Parameter 'Renal aging scaling factor' with path 'simulation|Organism|Kidney|Renal aging scaling factor' references an entity with path 'simulation|Organism|Kidney|Aging half-time' that cannot be found
Parameter 'Renal aging scaling factor' with path 'simulation|Organism|Kidney|Renal aging scaling factor' references an entity with path 'simulation|Organism|Kidney|Hill coefficient for aging GFR' that cannot be found
Parameter 'Renal aging scaling factor' with path 'simulation|Organism|Kidney|Renal aging scaling factor' references an entity with path 'simulation|Organism|Kidney|Maximal decreasing rate factor' that cannot be found
Multiple Errors were found for 'Renal aging scaling factor'

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ok this is because the indiviudal does not exposes DistrbiutedParameter

msevestre added a commit that referenced this issue Apr 6, 2023
@msevestre
Fixes #2589 only export species indepednent parameters to spatial str…
98b96f4 
…ucture
msevestre added a commit that referenced this issue Apr 6, 2023
@msevestre
Fixes #2589 only export species indepednent parameters to spatial str… (
7edb919 
#2591)

* Fixes #2589 only export species indepednent parameters to spatial structure

* Update to real DLLs

* Fixes typo
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