Code

Faster name selections#2755

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richardjgowers merged 18 commits intodevelopMDAnalysis/mdanalysis:developfrom faster_name_selectionsMDAnalysis/mdanalysis:faster_name_selectionsCopy head branch name to clipboardAug 25, 2020

+369-73

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Commits on Jul 26, 2020

• modified AtomNames topologyattr to include lookup table index

  richardjgowers

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  7af1162

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• cheeky little optimisation

  richardjgowers

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  b45d165

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• rework atom name selection to use lookup tables

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• Update topologyattrs.py

  richardjgowers

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• fixed test supplying integer as atom name

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• Update test_topologyattrs.py

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• use dict-lookup string attrs EVERYWHERERE

  richardjgowers

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• removed some code duplication

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  richardjgowers

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• improved nucleic/backbone selections

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• Added explicit tests for Resnames topologyattr

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• use fnmatchcase to be case sensitive

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Commits on Aug 4, 2020

• Merge branch 'develop' into faster_name_selections

  richardjgowers

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Commits on Aug 7, 2020

• Merge branch 'develop' into faster_name_selections

  orbeckst

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Commits on Aug 16, 2020

• Update package/MDAnalysis/core/selection.py

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• Merge branch 'develop' into faster_name_selections

  orbeckst

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Commits on Aug 19, 2020

• apply suggestions from code review

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  IAlibay

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Commits on Aug 25, 2020

• Merge branch 'develop' into faster_name_selections

  orbeckst

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  7493155

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• added test for setting multiple segids at once

  richardjgowers

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  ee64c32

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