FunSec-v4

Fixed some issues and improved performance.

FunSec-v3

Added various options for SignalP 4.1 and improved the script FunSec.sh

FunSec-v2.2

Added the argument of the -p option.

FunSec-v2.1

Added the parallel function to the option -f.

FunSec-v2.0

Improved the script and add the function to use GNU Parallel.

FunSec-v1.0

This script was designed to automate the prediction of fungi secreted proteins from a single or a batch of FASTA files using a complex pipeline that uses programs for the prediction of signal peptides, trans-membrane regions, subcellular localization and endoplasmic reticulum targeting motif. It can also be used for the prediction of complete fungi secretomes when given their proteomes.