Update CDEPS component; update documentation FAQ about setting resour… #15
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…ces and turning off output; update FAQ documentation (was 1608); update drag suite intent mods (was 1612) (#1597) * update cdeps * use fv3atm from PR 1612 * Changed UGWP diagnostic variable declaration intents from out to inout * Docs/faqupdate (#8) Co-authored-by: Denise Worthen <denise.worthen@noaa.gov> Co-authored-by: jkbk2004 <jong.kim@noaa.gov> Co-authored-by: Brian Curtis <brian.curtis@noaa.gov>
* MOM6 writes restarts in YYYYMMDD.HHMMSS.MOM*nc format * the final restart is timestamped * make changes in scripts to remove 'suffix-hours' strings * remove STORE_CORIOLIS from MOM_input templates * add timestamp in the end forecast restart filenames for GFS * FV3atm restart filename format
* Update FV3 * Merge pull request #67 from dustinswales/accumulated_cleanup * Updated physics * Reverting DISKNM/gaea to original * add new BL_DATE
* Faster Compile option turned on for a compile and test per project * added sample tests from each project to be tested with faster compile * HAFS app to be compiled with 64bit
…ble usage of shared pio (#1645) * Gaea system: change in hpc-stack location, miniconda3 (EPIC-managed) * move DISABLE_FMA to one if at the end * only disable fma on wcoss if FASTER=ON * Update CMakeModules to develop; remove STATIC requirement from PIO find. Co-authored-by: Natalie Perlin <Natalie.Perlin@noaa.gov> Co-authored-by: ulmononian <cameron_book@alumni.brown.edu>
* update WW3
* fix clock initialization for a restart in WW3 * update WW3 submodule * update to develop WW3
* aqm init_concentrations=false * ATMAQ tests are 32BIT
* use the latest postxconfig-NT-fv3lam.txt to run ifi * rename postxconfig-NT-fv3lam-ifi.txt to postxconfig-NT-fv3lam-new.txt since it is, in fact, the new postxconfig-NT-fv3lam.txt * add lightning threat indexes to rrfs 13km tests * pass w to model & fixes to ccpp/physics changes * FV3: turn off lightning_threat by default since it allocates wgrs and passes w * do not output ltg*_max variables since they're all zeroes anyway because the 13km run cannot make enough graupel * FV3: missing `active = (lightning_threat_indices_enabled)` for wgrd * enable ltg*_max variables in diag_table_hrrr * alternative POSTAPP for C96 versions of regional configurations * rap & hrrr variants use POSTAPP=fv3lam_global * new tests for ifi on acorn * fix out-of-bounds access in upp calslr_roebbr * fix another out-of-bounds access and move a message to stdout
* "merge RRFS-SD to the community repository" * "include the MYNN-EDMF update PR #1636" * add new control_p8_mynn test to exercise the FV3_GFS_v17_p8_mynn suite * change some variables to environment-controlled in cpld_control.nml.IN; add satmedmf=T for export_cpl() in default_vars.sh; add satmedmf=T for tests that use cpld_control.nml.IN, but not export_cpl * add new smoke_dir_fdb_coef to rrfs test namelist Co-authored-by: joeolson42 <Joseph.B.Olson@noaa.gov> Co-authored-by: Haiqin.Li <Haiqin.Li@noaa.gov> Co-authored-by: Grant Firl <grant.firl@noaa.gov>
… update #1673 (#1633) * Add 4 new quilting restart tests * Remove tests/qr.conf * Fix fv3_conf/regional_run.IN script to correctly copy restart files from dependent directory * Clean up Thompson table files (#38) * update control_qr_p8 control_restart_qr_p8 * Disable cpld_control_ciceC_p8 and cpld_control_c192_p8/cpld_restart_c192_p8 on Gaea * Update FV3 and WW3 Co-authored-by: Dusan Jovic <Dusan.Jovic@noaa.gov> Co-authored-by: Jessica Meixner <Jessica.Meixner@noaa.gov>
* reverting the bug fix for ktherm=2 allows all cpld tests to pass and the single datm test using ktherm=2 (datm_cdeps_gfs) to also pass all other datm tests which use ktherm=1 fail * confirm cice testb16d7fd is b4b for all datm/cpld tests * update CICE and CICE gitmodule * fix alignments in rt.conf, rt_gnu.conf
* bug fix from @tanyasmirnova for rrfs crashes during restart * new regression test rrfs_conus13km_hrrr_warm_restart_mismatch * Update CMEPS with ufsdev_ruclsm * point to top of ufsdev_ruclsm for FV3 and FV3/ccpp/physics * FV3: incorrect character lengths in two calls Co-authored-by: samuel.trahan <Samuel.Trahan@noaa.gov> Co-authored-by: Ratko Vasic <ratko.vasic@noaa.gov> Co-authored-by: joeolson42 <Joseph.B.Olson@noaa.gov> Co-authored-by: tanya Smirnova <tanya.smirnova@noaa.gov>
…KMPI (#1681) * Remove DEBUG_LINKMPI logic
…astic perturbations) needed for GFS/GEFS prototypes (#1677) * Bugfix for convection (prog closure) and gravity wave drag (for stochastic perturbations) needed for GFS/GEFS prototypes Co-authored-by: Michael Toy <michael.toy@noaa.gov>
* orginal version is atmwm (m=multi); atmw = cmeps/mesh cap * input_nml for control_p8 and atmwave p8 test are different only in cplwav and cplwav2atm logicals
* fix the fdiag for GEFS EP4 * update fv3 with atm.logf file
* Rename global fv3 inline post itag and control files. * Set read merra2 as default; add SDEN in gfs control file. * Update cpld_control_run.IN for changing post_itag name.
… develop (#1669) * Updates to new unified convection, cleaning etc --------- Co-authored-by: Jessica Meixner <Jessica.Meixner@noaa.gov>
* "update to run RRFS with GF"
…ines. Update WW3 (#1702) * Use nccmp to compare netcdf files * Use nccmp only on NOAA R&D systems * Do not skip checking fv_core.res.nc when GNU compiler is used * Update ufs_common.lua * Update ufs_hera modulefiles * Cleanup compile.sh. Remove unnecessary FIXME for gnu compiler * Update WW3
setup RT for flake * add fv3-conf for flake * add clm lake to FV3 * bug fixes, clm lake restart, and clm lake suite * flake_control_run.IN => lake_control_run.IN
* Update FV3 to a new version: Dycore semi-implicit solver update
* Update default_vars.sh to add noaacloud * Update detect_machine.sh to add noaacloud * Update module-setup.sh to add noaacloud env variables * Add noaacloud and env variable to rt.sh * Update module-setup.sh * Create ufs_noaacloud.intel.lua * Create ufs_common_spack.lua * Create compile_slurm.IN_noaacloud * Create fv3_slurm.IN_noaacloud * Update rt_utils.sh * Adding Requesting if statement to default_vars adding -B option back to nccmp
* This PR is created due to the ccpp-physics update for HR2 * PBL, Convection and Microphysics Update for HR2
…r baseline on gaea (#1749) * New baseline, develop-20230510 created * gaea hpc stack update and gaea9 phase out
* cpld pdlib, cpld control pass against created baselines * remove "wise" from wave domain name * update WW3, modify rtwaves for testing * set dnats to 0 in pdlib tests * remove scotch from ufs_common and add scotch module only for hera,cheyenne and orion
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…ces and turning off output; update FAQ documentation (was 1608); update drag suite intent mods (was 1612) (ufs-community#1597)
update cdeps
use fv3atm from PR 1612
Changed UGWP diagnostic variable declaration intents from out to inout
Docs/faqupdate (Lnd nuopc fms -> merge_upstream2lnd_nuopc #8)
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Input data additions/changes
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