Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

adds updates to handle GEOS-IT and GEOS-R21C system configurations #176

Merged
merged 1 commit into from
May 12, 2022
Merged

adds updates to handle GEOS-IT and GEOS-R21C system configurations #176

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
133 changes: 91 additions & 42 deletions src/Applications/GEOSdas_App/fvsetup
View file
Open in desktop

Large diffs are not rendered by default.

4 changes: 4 additions & 0 deletions src/Applications/GEOSdas_App/gen_lnbcs.pl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,7 @@
"sstdir=s",
"cubed",
"merra2",
"r21c",
"h" );

usage() if $opt_h;
Expand Down Expand Up @@ -80,6 +81,8 @@ sub init {

if ( $opt_merra2 ) {
$pcp_loc = "/discover/nobackup/projects/gmao/share/dao_ops/fvInput/merra_land/precip_CPCUexcludeAfrica-CMAP_corrected_MERRA/GEOSdas-2_1_4";
} elsif ( $opt_r21c ) { # This will updated
$pcp_loc = "/discover/nobackup/projects/gmao/share/dao_ops/fvInput/merra_land/precip_CPCUexcludeAfrica-CMAP_corrected_MERRA/GEOSdas-2_1_4";
} else {
$pcp_loc = "/gpfsm/dnb51/projects/p15/iau/merra_land/precip_CPCU-CMAP_corrected_MERRA/GEOSdas-2_1_4";
}
Expand Down Expand Up @@ -425,6 +428,7 @@ sub usage {
-fvhome location of FVHOME (default: write script locally)
-cubed needed for cubed GCM
-merra2 specify to set related BCs
-r21c specify to set related BCs
-h prints this usage notice

EXAMPLE COMMAND LINE
Expand Down
4 changes: 3 additions & 1 deletion src/Applications/GEOSdas_App/write_FVDAS_Run_Config.pl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@
my ($ARCH, $HOST);
my ($FVHOME, $FVROOT, $RUNDIR);
my ($AOD_OBSCLASS, $BERROR, $DO_ECS_OUT, $DO_REM_SYNC, $EXPID, $FVARCH,
$FVBCS, $GID, $MONTHLY_MEANS, $MKSI_SIDB, $MP_SET_NUMTHREADS, $NCEPINPUT, $NOBACKUP,
$FVBCS, $GID, $MONTHLY_MEANS, $MKSI_SIDB, $MKSI_OZDB, $MP_SET_NUMTHREADS, $NCEPINPUT, $NOBACKUP,
$OBSCLASS, $OBSCLASS_NOAIRS, $OMP_NUM_THREADS, $RUN_QUADS, $PYRADMON,
$VTRACK, $VTXLEVS, $VTXRELOC);
my ($BASEDIR, $FCSTID, $FVDMGET, $G5MODULES, $PLOTS_LOC, $GEOSUTIL, $GTAG);
Expand Down Expand Up @@ -93,6 +93,7 @@ sub init {
$GID = $ENV{"GID"};
$MONTHLY_MEANS = $ENV{"MONTHLY_MEANS"};
$MKSI_SIDB = $ENV{"MKSI_SIDB"};
$MKSI_OZDB = $ENV{"MKSI_OZDB"};
$MP_SET_NUMTHREADS = $ENV{"MP_SET_NUMTHREADS"};
$NCEPINPUT = $ENV{"NCEPINPUT"};
$OBSCLASS = $ENV{"OBSCLASS"};
Expand Down Expand Up @@ -323,6 +324,7 @@ sub writefile {
print RUNCONF "setenv FVDOLMS $FVDOLMS\n" if $FVDOLMS;
print RUNCONF "setenv CASE $CASE\n" if $CASE;
print RUNCONF "setenv MKSI_SIDB $MKSI_SIDB\n" if $MKSI_SIDB;
print RUNCONF "setenv MKSI_OZDB $MKSI_OZDB\n" if $MKSI_OZDB;
print RUNCONF "setenv MP_SET_NUMTHREADS $MP_SET_NUMTHREADS\n" if $MP_SET_NUMTHREADS;
print RUNCONF "setenv OMP_NUM_THREADS $OMP_NUM_THREADS\n" if $OMP_NUM_THREADS;
print RUNCONF "setenv ARCH_QUEUE \"$ARCH_QUEUE\"\n" if $ARCH_QUEUE;
Expand Down
11 changes: 11 additions & 0 deletions src/Applications/NCEP_Etc/NCEP_enkf/scripts/gmao/etc/CMakeLists.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -39,3 +39,14 @@ install (
FILES ${ALLETC}
DESTINATION etc/atmens
)

set (R21C_files
R21C/atmos_enkf.nml.tmpl
R21C/obs1gsi_mean.rc
R21C/obs1gsi_member.rc
)

install (
FILES ${R21C_files}
DESTINATION etc/atmens/R21C
)
142 changes: 142 additions & 0 deletions src/Applications/NCEP_Etc/NCEP_enkf/scripts/gmao/etc/R21C/atmos_enkf.nml.tmpl
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,142 @@
&nam_enkf
datestring=">>>YYYYMMDDHH<<<",datapath="./",
expid=">>>EXPID<<<",
analpertwtnh=0.85,analpertwtsh=0.85,analpertwttr=0.85,
covinflatemax=1.e2,covinflatemin=1,pseudo_rh=.true.,
corrlengthnh=2000,corrlengthsh=2000,corrlengthtr=2000,
lnsigcutoffnh=2.0,lnsigcutoffsh=2.0,lnsigcutofftr=2.0,
lnsigcutoffsatnh=2.0,lnsigcutoffsatsh=2.0,lnsigcutoffsattr=2.0,
lnsigcutoffpsnh=2.0,lnsigcutoffpssh=2.0,lnsigcutoffpstr=2.0,
obtimelnh=1.e30,obtimelsh=1.e30,obtimeltr=1.e30,
saterrfact=1.0,numiter=1,
sprd_tol=1.e30,paoverpb_thresh=0.990,iassim_order=0,
nlevs=>>>ENS_NLEVS<<<,nanals=>>>NMEM<<<,
nsfcvars=2,
! ntrac=3,
nvars=9,
stats_usedob_only=.true.,
deterministic=.true.,sortinc=.true.,lupd_satbiasc=.false.,
readin_localization=.true.,
nlats=>>>ENS_NLATS<<<,nlons=>>>ENS_NLONS<<<,
! nhr_anal(1)=3,
! nhr_anal(2)=4,
! nhr_anal(3)=5,
! nhr_anal(4)=6,
! nhr_anal(5)=7,
! nhr_anal(6)=8,
! nhr_anal(7)=9,
@RADBC newpc4pred=.true.,adp_anglebc=.true.,angord=4,
@RADBC use_edges=.false.,emiss_bc=.true.,
!
! forward EFSO
fso_flag = .false.,
fso_cycling = .true.,
/
&satobs_enkf
sattypes_rad(1) = 'amsua_n15', dsis(1) = 'amsua_n15',
sattypes_rad(2) = 'amsub_n15', dsis(2) = 'amsub_n15',
sattypes_rad(3) = 'hirs3_n16', dsis(3) = 'hirs3_n16',
sattypes_rad(4) = 'amsua_n16', dsis(4) = 'amsua_n16',
sattypes_rad(5) = 'amsub_n16', dsis(5) = 'amsub_n16',
sattypes_rad(6) = 'hirs3_n17', dsis(6) = 'hirs3_n17',
sattypes_rad(7) = 'amsua_n17', dsis(7) = 'amsua_n17',
sattypes_rad(8) = 'amsub_n17', dsis(8) = 'amsub_n17',
sattypes_rad(9) = 'hirs4_n18', dsis(9) = 'hirs4_n18',
sattypes_rad(10)= 'amsua_n18', dsis(10)= 'amsua_n18',
! sattypes_rad(11)= 'amsub_n18', dsis(11)= 'amsub_n18',
sattypes_rad(12)= 'mhs_n18', dsis(12)= 'mhs_n18',
sattypes_rad(13)= 'hirs4_n19', dsis(13)= 'hirs4_n19',
sattypes_rad(14)= 'amsua_n19', dsis(14)= 'amsua_n19',
! sattypes_rad(15)= 'amsub_n19', dsis(15)= 'amsub_n19',
sattypes_rad(16)= 'mhs_n19', dsis(16)= 'mhs_n19',
sattypes_rad(17)= 'hirs4_metop-a', dsis(17)= 'hirs4_metop-a',
sattypes_rad(18)= 'amsua_metop-a', dsis(18)= 'amsua_metop-a',
sattypes_rad(19)= 'amsua_metop-b', dsis(19)= 'amsua_metop-b',
sattypes_rad(20)= 'iasi_metop-a', dsis(20)= 'iasi_metop-a',
sattypes_rad(21)= 'airs_aqua', dsis(21)= 'airs_aqua',
sattypes_rad(22)= 'amsua_aqua', dsis(22)= 'amsua_aqua',
! sattypes_rad(15)= 'goes_img_g11', dsis(15)= 'imgr_g11',
! sattypes_rad(16)= 'goes_img_g12', dsis(16)= 'imgr_g12',
! sattypes_rad(17)= 'goes_img_g13', dsis(17)= 'imgr_g13',
! sattypes_rad(18)= 'goes_img_g14', dsis(18)= 'imgr_g14',
! sattypes_rad(19)= 'goes_img_g15', dsis(19)= 'imgr_g15',
sattypes_rad(23)= 'amsre_aqua', dsis(23)= 'amsre_aqua',
! sattypes_rad(24)= 'ssmis_f16', dsis(24)= 'ssmis_f16',
sattypes_rad(25)= 'ssmis_f17', dsis(25)= 'ssmis_f17',
sattypes_rad(26)= 'ssmis_f18', dsis(26)= 'ssmis_f18',
! sattypes_rad(27)= 'ssmis_f19', dsis(27)= 'ssmis_f19',
! sattypes_rad(28)= 'ssmis_f20', dsis(28)= 'ssmis_f20',
! sattypes_rad(29)= 'sndrd1_g11', dsis(29)= 'sndrD1_g11',
! sattypes_rad(30)= 'sndrd2_g11', dsis(30)= 'sndrD2_g11',
! sattypes_rad(31)= 'sndrd3_g11', dsis(31)= 'sndrD3_g11',
! sattypes_rad(32)= 'sndrd4_g11', dsis(32)= 'sndrD4_g11',
! sattypes_rad(33)= 'sndrd1_g12', dsis(33)= 'sndrD1_g12',
! sattypes_rad(34)= 'sndrd2_g12', dsis(34)= 'sndrD2_g12',
! sattypes_rad(35)= 'sndrd3_g12', dsis(35)= 'sndrD3_g12',
! sattypes_rad(36)= 'sndrd4_g12', dsis(36)= 'sndrD4_g12',
! sattypes_rad(37)= 'sndrd1_g13', dsis(37)= 'sndrD1_g13',
! sattypes_rad(38)= 'sndrd2_g13', dsis(38)= 'sndrD2_g13',
! sattypes_rad(39)= 'sndrd3_g13', dsis(39)= 'sndrD3_g13',
! sattypes_rad(40)= 'sndrd4_g13', dsis(40)= 'sndrD4_g13',
! sattypes_rad(41)= 'sndrd1_g14', dsis(41)= 'sndrD1_g14',
! sattypes_rad(42)= 'sndrd2_g14', dsis(42)= 'sndrD2_g14',
! sattypes_rad(43)= 'sndrd3_g14', dsis(43)= 'sndrD3_g14',
! sattypes_rad(44)= 'sndrd4_g14', dsis(44)= 'sndrD4_g14',
! sattypes_rad(45)= 'sndrd1_g15', dsis(45)= 'sndrD1_g15',
! sattypes_rad(46)= 'sndrd2_g15', dsis(46)= 'sndrD2_g15',
! sattypes_rad(47)= 'sndrd3_g15', dsis(47)= 'sndrD3_g15',
! sattypes_rad(48)= 'sndrd4_g15', dsis(48)= 'sndrD4_g15',
sattypes_rad(49)= 'mhs_metop-a', dsis(49)= 'mhs_metop-a',
sattypes_rad(50)= 'atms_npp', dsis(50)= 'atms_npp',
sattypes_rad(51)= 'cris_npp', dsis(51)= 'cris_npp',
! sattypes_rad(52)= 'seviri_m08', dsis(52)= 'seviri_m08',
! sattypes_rad(53)= 'seviri_m09', dsis(53)= 'seviri_m09',
! sattypes_rad(54)= 'seviri_m10', dsis(54)= 'seviri_m10',
sattypes_rad(55)= 'mhs_metop-b', dsis(55)= 'mhs_metop-b',
sattypes_rad(56)= 'iasi_metop-b', dsis(56)= 'iasi_metop-b',
sattypes_rad(57)= 'avhrr_n18', dsis(57)= 'avhrr3_n18',
sattypes_rad(58)= 'avhrr_n19', dsis(58)= 'avhrr3_n19',
sattypes_rad(59)= 'avhrr_metop-a', dsis(59)= 'avhrr3_metop-a',
sattypes_rad(60)= 'avhrr_metop-b', dsis(60)= 'avhrr3_metop-b',
sattypes_rad(61)= 'gmi_gpm', dsis(61)= 'gmi_gpm',
sattypes_rad(62)= 'amsua_metop-c', dsis(62)= 'amsua_metop-c',
sattypes_rad(63)= 'mhs_metop-c', dsis(63)= 'mhs_metop-c',
sattypes_rad(64)= 'cris-fsr_n20', dsis(64)= 'cris-fsr_n20',
sattypes_rad(65)= 'cris-fsr_npp', dsis(65)= 'cris-fsr_npp',
sattypes_rad(66)= 'iasi_metop-c', dsis(66)= 'iasi_metop-c',
sattypes_rad(67)= 'msu_n11', dsis(67)= 'msu_n11',
sattypes_rad(68)= 'msu_n12', dsis(68)= 'msu_n12',
sattypes_rad(69)= 'msu_n14', dsis(69)= 'msu_n14',
sattypes_rad(70)= 'ssmi_f13', dsis(70)= 'ssmi_f13',
sattypes_rad(71)= 'ssmi_f14', dsis(71)= 'ssmi_f14',
sattypes_rad(72)= 'ssmi_f15', dsis(72)= 'ssmi_f15',
sattypes_rad(73)= 'tmi_trmm', dsis(73)= 'tmi_trmm',
sattypes_rad(74)= 'avhrr_n15', dsis(74)= 'avhrr3_n15',
sattypes_rad(75)= 'avhrr_n16', dsis(75)= 'avhrr3_n16',
sattypes_rad(76)= 'avhrr_n17', dsis(76)= 'avhrr3_n17',
sattypes_rad(77)= 'atms_n20', dsis(77)= 'atms_n20',
sattypes_rad(78)= 'amsr2_gcom-w1', dsis(78)= 'amsr2_gcom-w1',
/
&ozobs_enkf
sattypes_oz(1) = 'sbuv8_n11',
sattypes_oz(2) = 'sbuv8_n14',
sattypes_oz(3) = 'sbuv8_n16',
sattypes_oz(4) = 'sbuv8_n17',
sattypes_oz(5) = 'sbuv8_n18',
sattypes_oz(6) = 'sbuv8_n19',
sattypes_oz(7) = 'mls55_aura',
!sattypes_oz(8) = 'omi_aura',
!sattypes_oz(9) = 'gome_metop-a',
!sattypes_oz(10) = 'gome_metop-b',
!sattypes_oz(11) = 'o3lev_aura',
/

spectral_truncation: 96

eps_for_log_transform_aod: -1.0

fso_ana_increment_test: no

analysis_type4fso: null

verification_type4fso: null
Loading