Update README.md

debug link to nextflow.config, improve

README.md

@@ -5,10 +5,10 @@ Run CoGAPS followed by SpaceMarkers to find spatially interacting genes in Visiu
 Locally with docker installed (see [samplesheet.csv](samplesheet.csv) for reference):
 
 ```
-nextflow run main.nf --input ./[samplesheet] -w [workdir] -profile docker
+nextflow run main.nf --input [samplesheet] -w [workdir] -profile docker
 ```
 
-Other running options - check out profiles in [nextflow.config](samplesheet.csv).
+Other running options - check out profiles in [nextflow.config](nextflow.config).
 
 >[!TIP]
->Use `--max_memory --max_cpus --max_time` to control the maximum resources to grant on the host.
+>Use `--max_memory --max_cpus --max_time` to control the maximum resources to grant on the host.