Skip to content

Commit

Permalink
dockerfile updates
Browse files Browse the repository at this point in the history
  • Loading branch information
bgpalmer committed Mar 10, 2023
1 parent f0605e4 commit b66ecf5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion Dockerfile
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
FROM rocker/r-ubuntu:22.04
RUN apt-get update && apt-get install -y --no-install-recommends build-essential python3-pip libssl-dev libbz2-dev libsdl1.2-dev liblzma-dev libcurl4-openssl-dev zlib1g-dev libxml2-dev trf bwa bcftools samtools default-jre && rm -rf /var/lib/apt/lists/*
RUN apt-get update && apt-get install -y --no-install-recommends build-essential python3-pip libssl-dev libbz2-dev libsdl1.2-dev liblzma-dev libcurl4-openssl-dev zlib1g-dev libxml2-dev trf bwa bcftools samtools default-jre pandoc && rm -rf /var/lib/apt/lists/*
RUN pip install cutadapt==4.1

RUN mkdir -p /usr/local/lib/R/etc/ /usr/lib/R/etc/
Expand Down

0 comments on commit b66ecf5

Please sign in to comment.