Code

Jinyuntang/lnd/betr#367

Code

Closed

jinyuntang wants to merge 233 commits intomasterE3SM-Project/E3SM:masterfrom jinyuntang/lnd/betrE3SM-Project/E3SM:jinyuntang/lnd/betrCopy head branch name to clipboard

+24,572-1,076

Commits

Commits on Feb 10, 2015

• add betr files

  jinyuntang

  committed
  46409f5

  Copy full SHA for 46409f5

• add bgc_century direcotry

  jinyuntang

  committed
  abfc5c8

  Copy full SHA for abfc5c8

• finished betr code integration and prepare for debug

  jinyuntang

  committed
  9e37d1c

  Copy full SHA for 9e37d1c

• add additional changes to enable betr

  jinyuntang

  committed
  6b42a55

  Copy full SHA for 6b42a55

Commits on Feb 11, 2015

• add interface for betr bgc above/below ground coupling

  jinyuntang

  committed
  35bf04c

  Copy full SHA for 35bf04c

• add math utils for betr

  jinyuntang

  committed
  7ae0e98

  Copy full SHA for 7ae0e98

• remove o18 case for betr

  jinyuntang

  committed
  412f344

  Copy full SHA for 412f344

• betr compiling test passed

  jinyuntang

  committed
  b3246bd

  Copy full SHA for b3246bd

• conitunuing the betr online bgc

  jinyuntang

  committed
  b2748ec

  Copy full SHA for b2748ec

• compiling test passed for betr bgc

  jinyuntang

  committed
  2f628ca

  Copy full SHA for 2f628ca

Commits on Feb 12, 2015

• additional modification to enable betr century bgc

  jinyuntang

  committed
  7d8bf63

  Copy full SHA for 7d8bf63

• additional betr bgc interface modification

  jinyuntang

  committed
  66acf9c

  Copy full SHA for 66acf9c

Commits on Feb 13, 2015

• additional coupling for betr bgc

  jinyuntang

  committed
  5596893

  Copy full SHA for 5596893

• nitrogen storage pool added for the on-line betr bgc

  jinyuntang

  committed
  0afd9e6

  Copy full SHA for 0afd9e6

Commits on Feb 14, 2015

• addition preparation for on-line betr bgc

  jinyuntang

  committed
  bd5f697

  Copy full SHA for bd5f697

Commits on Feb 15, 2015

• additional modification to enable betr bgc

  jinyuntang

  committed
  c30e657

  Copy full SHA for c30e657

Commits on Feb 16, 2015

• continuing update of betr bgc

  jinyuntang

  committed
  390ab14

  Copy full SHA for 390ab14

• betr bgc update

  jinyuntang

  committed
  295aa04

  Copy full SHA for 295aa04

• update for betr bgc

  jinyuntang

  committed
  28f431a

  Copy full SHA for 28f431a

• betr bgc debug

  jinyuntang

  committed
  d7a59b5

  Copy full SHA for d7a59b5

Commits on Feb 19, 2015

• additional update of betrbgc

  jinyuntang

  committed
  4115788

  Copy full SHA for 4115788

Commits on Feb 20, 2015

• additional update to betr bgc

  jinyuntang

  committed
  7eebeeb

  Copy full SHA for 7eebeeb

Commits on Feb 21, 2015

• update betrbgc

  jinyuntang

  committed
  bcb988a

  Copy full SHA for bcb988a

Commits on Feb 22, 2015

• update betr_bgc

  jinyuntang

  committed
  333d72b

  Copy full SHA for 333d72b

• betr debug

  jinyuntang

  committed
  3f60c28

  Copy full SHA for 3f60c28

• update env_mach_specific.edison

  jinyuntang

  committed
  302df8c

  Copy full SHA for 302df8c

Commits on Feb 23, 2015

• added aerechyma conductance calculation

  jinyuntang

  committed
  52d7eef

  Copy full SHA for 52d7eef

• aere_cond debug

  jinyuntang

  committed
  68151f6

  Copy full SHA for 68151f6

• add restart file for tracercoeff_type

  jinyuntang

  committed
  fa62f75

  Copy full SHA for fa62f75

• tracercoeff restart debug

  jinyuntang

  committed
  81f23c1

  Copy full SHA for 81f23c1

Commits on Feb 24, 2015

• implemented aerechyma transport in the new century bgc

  jinyuntang

  committed
  8ceb1d9

  Copy full SHA for 8ceb1d9

• debug aerenchyma transport and remove unsed file

  jinyuntang

  committed
  f2459dd

  Copy full SHA for f2459dd

• modify the reaction form for centurybgc

  jinyuntang

  committed
  d371a9f

  Copy full SHA for d371a9f

• additional update of betr bgc

  jinyuntang

  committed
  52f48f7

  Copy full SHA for 52f48f7

• debug mock betr run

  jinyuntang

  committed
  449ba77

  Copy full SHA for 449ba77

Commits on Feb 25, 2015

• mock betr debug

  jinyuntang

  committed
  95b278c

  Copy full SHA for 95b278c

• add setup for solid phase diffusive transport

  jinyuntang

  committed
  298d800

  Copy full SHA for 298d800

• mockrun test passed

  jinyuntang

  committed
  21129fe

  Copy full SHA for 21129fe

• add cn snychronizer for betr bgc

  jinyuntang

  committed
  ae56fea

  Copy full SHA for ae56fea

• debug cold initializer for betr bgc

  jinyuntang

  committed
  f026ecc

  Copy full SHA for f026ecc

• betrbgc flux tracking

  jinyuntang

  committed
  cdafece

  Copy full SHA for cdafece

• start debugging betr bgc

  jinyuntang

  committed
  6296c87

  Copy full SHA for 6296c87

Commits on Feb 26, 2015

• betr cent debug

  jinyuntang

  committed
  00a5de7

  Copy full SHA for 00a5de7

• betr bgc debug

  jinyuntang

  committed
  11a9e95

  Copy full SHA for 11a9e95

• revise betr cent initializer

  jinyuntang

  committed
  4f9c626

  Copy full SHA for 4f9c626

• betr cent debug

  jinyuntang

  committed
  7d20920

  Copy full SHA for 7d20920

• add cent bgc screening

  jinyuntang

  committed
  ece8c0b

  Copy full SHA for ece8c0b

• betr bgc debug

  jinyuntang

  committed
  ebc430c

  Copy full SHA for ebc430c

Commits on Feb 27, 2015

• betr bgc debug

  jinyuntang

  committed
  f311535

  Copy full SHA for f311535

• betr cent debug

  jinyuntang

  committed
  5e5a7c5

  Copy full SHA for 5e5a7c5

• betr bgc update

  jinyuntang

  committed
  7271c3a

  Copy full SHA for 7271c3a

• betr bgc reaction setup update

  jinyuntang

  committed
  b9e2765

  Copy full SHA for b9e2765

• betr debug

  jinyuntang

  committed
  91e7503

  Copy full SHA for 91e7503

Commits on Feb 28, 2015

• betrbgc debug

  jinyuntang

  committed
  5fed63c

  Copy full SHA for 5fed63c

• cn balance fix for betr bgc

  jinyuntang

  committed
  48d0af5

  Copy full SHA for 48d0af5

• betrbgc mass bal debug

  jinyuntang

  committed
  4176497

  Copy full SHA for 4176497

Commits on Mar 1, 2015

• betr bgc update

  jinyuntang

  committed
  41fd00e

  Copy full SHA for 41fd00e

• betr bgc update

  jinyuntang

  committed
  c44b7f6

  Copy full SHA for c44b7f6

Commits on Mar 2, 2015

• betr update

  jinyuntang

  committed
  8a44593

  Copy full SHA for 8a44593

• update a small value screener for mbbks ode

  jinyuntang

  committed
  1eba639

  Copy full SHA for 1eba639

• betr bgc debug

  jinyuntang

  committed
  c580819

  Copy full SHA for c580819

• betr debug

  jinyuntang

  committed
  ec94bb6

  Copy full SHA for ec94bb6

Commits on Mar 3, 2015

• betr mass bal debug

  jinyuntang

  committed
  b8fc2d4

  Copy full SHA for b8fc2d4

• add aboveground cmass diag var

  jinyuntang

  committed
  baa0ead

  Copy full SHA for baa0ead

• add abg c diagnostic

  jinyuntang

  committed
  db50ae1

  Copy full SHA for db50ae1

• nitrogen budget debug

  jinyuntang

  committed
  8999245

  Copy full SHA for 8999245

• n budget debug

  jinyuntang

  committed
  bf63600

  Copy full SHA for bf63600

• fix the conflict

  Show description for 7be8749
  jinyuntang

  committed
  7be8749

  Copy full SHA for 7be8749

Commits on Mar 4, 2015

• n balance fix for betr bgc

  jinyuntang

  committed
  e638e4d

  Copy full SHA for e638e4d

• nflux fix for betr bgc

  jinyuntang

  committed
  e888792

  Copy full SHA for e888792

Commits on Mar 8, 2015

• N bal debug

  jinyuntang

  committed
  200c8b6

  Copy full SHA for 200c8b6

• N bal debug

  jinyuntang

  committed
  bf5635c

  Copy full SHA for bf5635c

• betr bal

  jinyuntang

  committed
  cbba309

  Copy full SHA for cbba309

Commits on Mar 9, 2015

• n bal debug

  jinyuntang

  committed
  d58716b

  Copy full SHA for d58716b

• bgc n bal

  jinyuntang

  committed
  6151415

  Copy full SHA for 6151415

Commits on Mar 11, 2015

• betr n bal debug

  jinyuntang

  committed
  dcc4b5d

  Copy full SHA for dcc4b5d

• add nflux diagnostic variables

  jinyuntang

  committed
  68fc12c

  Copy full SHA for 68fc12c

• betr n bal debug

  jinyuntang

  committed
  ac3e0a1

  Copy full SHA for ac3e0a1

• n bal debug

  jinyuntang

  committed
  745d08e

  Copy full SHA for 745d08e

• n bal bug fixed apparently

  jinyuntang

  committed
  55868c2

  Copy full SHA for 55868c2

• a neg tracer bug needs fixing

  jinyuntang

  committed
  346eedf

  Copy full SHA for 346eedf

Commits on Mar 12, 2015

• prepare to fixe the high solbulibility problem

  jinyuntang

  committed
  86c3408

  Copy full SHA for 86c3408

• add fixes for the highly soluable tracers

  jinyuntang

  committed
  65dadf3

  Copy full SHA for 65dadf3

Commits on Mar 13, 2015

• I believe the n bal bug is finallyed fixed

  jinyuntang

  committed
  ea8aa6c

  Copy full SHA for ea8aa6c

Commits on Mar 14, 2015

• n bal problem fixed

  jinyuntang

  committed
  b4b6671

  Copy full SHA for b4b6671

Commits on Mar 16, 2015

• prepare for betr bgc spinup test

  jinyuntang

  committed
  4d076d3

  Copy full SHA for 4d076d3

• prepare spinup test for betr_cent

  jinyuntang

  committed
  58c553e

  Copy full SHA for 58c553e

• betr_cent debug

  jinyuntang

  committed
  d5e8af5

  Copy full SHA for d5e8af5

• betr spinup test 1st round pass

  jinyuntang

  committed
  460698d

  Copy full SHA for 460698d

Commits on Mar 19, 2015

• modify the solid phase diffusivity setup to be implementation specific

  jinyuntang

  committed
  4178ad1

  Copy full SHA for 4178ad1

Commits on Mar 20, 2015

• ready to do betr_cent spinup

  jinyuntang

  committed
  84547f9

  Copy full SHA for 84547f9

Commits on Mar 23, 2015

• bug fix for the advective error check

  jinyuntang

  committed
  a1407e7

  Copy full SHA for a1407e7

Commits on Mar 25, 2015

• reset the minimum timestep allowed by the advection scheme

  jinyuntang

  committed
  ca9c65d

  Copy full SHA for ca9c65d

• modified the adaptive time step for advection

  jinyuntang

  committed
  84c328a

  Copy full SHA for 84c328a

• bug fix for aqueous advection

  jinyuntang

  committed
  be156a4

  Copy full SHA for be156a4

• revise the negative tracer treatment in advection

  jinyuntang

  committed
  12f2b42

  Copy full SHA for 12f2b42

Commits on Mar 26, 2015

• revise to turn off movement for some non-important tracers

  jinyuntang

  committed
  936c75e

  Copy full SHA for 936c75e

• tracer movement reset

  jinyuntang

  committed
  b1b9993

  Copy full SHA for b1b9993

• Merge branch 'jinyuntang/lnd/betr' of github.com:jinyuntang/ACME into jinyuntang/lnd/betr

  Show description for 8455230
  jinyuntang

  committed
  8455230

  Copy full SHA for 8455230

• additional revising to accelerate bgc_century spinup

  jinyuntang

  committed
  a6ed907

  Copy full SHA for a6ed907

• bgc century debug

  jinyuntang

  committed
  1b12cff

  Copy full SHA for 1b12cff

• betr centbgc revision

  jinyuntang

  committed
  448bb7f

  Copy full SHA for 448bb7f

Commits on Mar 27, 2015

• apply negative draiange fixer to tracer drainage calculation

  jinyuntang

  committed
  d1db75e

  Copy full SHA for d1db75e

• change ode solver in betr cent to accerlate simulation

  jinyuntang

  committed
  f966610

  Copy full SHA for f966610

• use blas subroutine in betr

  jinyuntang

  committed
  e08422c

  Copy full SHA for e08422c

• bug fix for daxpy use

  jinyuntang

  committed
  b11aaa6

  Copy full SHA for b11aaa6

• additional use of blas in betr

  jinyuntang

  committed
  63c6b5d

  Copy full SHA for 63c6b5d

• typo fix in betr

  jinyuntang

  committed
  83ad338

  Copy full SHA for 83ad338

• changed loop orders to speedup betr bgc

  jinyuntang

  committed
  ccb913e

  Copy full SHA for ccb913e

• some typo fix after loop reordering

  jinyuntang

  committed
  91af67f

  Copy full SHA for 91af67f

• now apply the source sink term to diffusion calculation to save computing time

  jinyuntang

  committed
  f3c90fd

  Copy full SHA for f3c90fd

Commits on Mar 28, 2015

• solid phase diffus debug

  jinyuntang

  committed
  b0aef5b

  Copy full SHA for b0aef5b

• solid diffus debug

  jinyuntang

  committed
  31b0fe3

  Copy full SHA for 31b0fe3

• solid betr cent debug

  jinyuntang

  committed
  64504d7

  Copy full SHA for 64504d7

• fix the intialization bug in betr cent

  jinyuntang

  committed
  e45e66e

  Copy full SHA for e45e66e

Commits on Mar 29, 2015

• start fixing the negative tracer bug

  jinyuntang

  committed
  a9118cb

  Copy full SHA for a9118cb

• betr cent debug

  jinyuntang

  committed
  0f9bd6d

  Copy full SHA for 0f9bd6d

• betr cent bug fixed

  jinyuntang

  committed
  680f2f0

  Copy full SHA for 680f2f0

Commits on Apr 1, 2015

• remove nitrogen demand dependence on storage pool

  jinyuntang

  committed
  ead77d0

  Copy full SHA for ead77d0

• add output of decomp scalars

  jinyuntang

  committed
  a5a1739

  Copy full SHA for a5a1739

Commits on Apr 2, 2015

• add fine root carbon dependent nitrogen uptake profile

  jinyuntang

  committed
  bff251a

  Copy full SHA for bff251a

Commits on Apr 9, 2015

• bug fix for betr_cent

  jinyuntang

  committed
  c9f99af

  Copy full SHA for c9f99af

• add coefficients to setup relative competitiveness of no3 and nh4 for decomposition and plant uptake

  jinyuntang

  committed
  0324559

  Copy full SHA for 0324559

• prepare to introduce nh4 and no3 competing factors between different

  Show description for bebca1d
  jinyuntang

  committed
  bebca1d

  Copy full SHA for bebca1d

• bug fix for nitrification in betr cent

  jinyuntang

  committed
  1113b74

  Copy full SHA for 1113b74

• remove some debug info

  jinyuntang

  committed
  ad2efaa

  Copy full SHA for ad2efaa

• some typo fix

  jinyuntang

  committed
  4f52ac0

  Copy full SHA for 4f52ac0

• Merge branch 'jinyuntang/lnd/betr' of https://github.com/jinyuntang/ACME into jinyuntang/lnd/betr

  Show description for e79f70e
  jinyuntang

  committed
  e79f70e

  Copy full SHA for e79f70e

Commits on Apr 10, 2015

• remove obsolete files

  jinyuntang

  committed
  7033158

  Copy full SHA for 7033158

Commits on Apr 11, 2015

• mirror test

  jinyuntang

  committed
  965b0b4

  Copy full SHA for 965b0b4

• test .gitignore

  jinyuntang

  committed
  9ec6ed3

  Copy full SHA for 9ec6ed3

Commits on Apr 19, 2015

• add priority access to fixed nitrogen for plant to fix the spinup problem

  jinyuntang

  committed
  422508e

  Copy full SHA for 422508e

Commits on Apr 20, 2015

• bug fix for the modified plant nitrogen competition

  jinyuntang

  committed
  c93824d

  Copy full SHA for c93824d

Commits on Apr 21, 2015

• add ode_rk2 to trajectory updating in transportmod

  jinyuntang

  committed
  97583dd

  Copy full SHA for 97583dd

• tuning the nitrogen competition of the model

  jinyuntang

  committed
  5481853

  Copy full SHA for 5481853

• bug fix for betr_cent bgc

  jinyuntang

  committed
  07dbd45

  Copy full SHA for 07dbd45

Commits on Apr 22, 2015

• use the ode_ebbks1 for betr_cent

  jinyuntang

  committed
  175f538

  Copy full SHA for 175f538

Commits on Apr 24, 2015

• modify the competitive factor for nh4 in N competition

  jinyuntang

  committed
  1342f48

  Copy full SHA for 1342f48

• bug fix in nitrogen competition

  jinyuntang

  committed
  35dba4b

  Copy full SHA for 35dba4b

Commits on May 1, 2015

• some minor update of the math modules

  jinyuntang

  committed
  4cdc297

  Copy full SHA for 4cdc297

Commits on May 5, 2015

• bug fixes after adding new algebraic root solvers

  jinyuntang

  committed
  9a359e8

  Copy full SHA for 9a359e8

Commits on May 10, 2015

• added the group interface for tracer setup and also updated the nh4 priority

  jinyuntang

  committed
  d917a80

  Copy full SHA for d917a80

• typo fix for calling calc_cascade_matrix

  jinyuntang

  committed
  65e969c

  Copy full SHA for 65e969c

• some bug fix after new betr interface update

  jinyuntang

  committed
  76e6484

  Copy full SHA for 76e6484

• typo fix

  jinyuntang

  committed
  59ab03d

  Copy full SHA for 59ab03d

• bug fix after betr interface update

  jinyuntang

  committed
  06b0a68

  Copy full SHA for 06b0a68

• bug fix after betr interface update

  jinyuntang

  committed
  eff671c

  Copy full SHA for eff671c

• bug fix for betr_cent bgc

  jinyuntang

  committed
  9f86cfe

  Copy full SHA for 9f86cfe

Commits on May 11, 2015

• some bug fix after interface update

  jinyuntang

  committed
  99d4578

  Copy full SHA for 99d4578

Commits on May 12, 2015

• bug fix for mock run after betr interface update

  jinyuntang

  committed
  c0d9548

  Copy full SHA for c0d9548

• minor bug fix after betr interface udpate

  jinyuntang

  committed
  d5f5569

  Copy full SHA for d5f5569

• bug fix in r-maxtrix tridiag solver

  jinyuntang

  committed
  30d3cd0

  Copy full SHA for 30d3cd0

• mock run test passed after betr interface update

  jinyuntang

  committed
  ebd8ef4

  Copy full SHA for ebd8ef4

• debugging betr cent after interface update

  jinyuntang

  committed
  45472e5

  Copy full SHA for 45472e5

Commits on May 13, 2015

• bug fix for betr cent after interface update

  jinyuntang

  committed
  2c02a9b

  Copy full SHA for 2c02a9b

• bug fix for intel compiler on lawrencium

  jinyuntang

  committed
  0de81f4

  Copy full SHA for 0de81f4

• mass balance debug for betr cent

  jinyuntang

  committed
  2fed370

  Copy full SHA for 2fed370

• Merge branch 'jinyuntang/lnd/betr' of github.com:jinyuntang/ACME into jinyuntang/lnd/betr

  jinyuntang

  committed
  6b776e8

  Copy full SHA for 6b776e8

• add a fix for solid phase transport which may trigger a CN mass balance error due to rundoff accmulation

  jinyuntang

  committed
  6913e3e

  Copy full SHA for 6913e3e

Commits on May 14, 2015

• fixed bugs after betr interface update, now it's running

  jinyuntang

  committed
  35bd333

  Copy full SHA for 35bd333

• add option to do n leaching in betr while using clm4.5 bgc

  jinyuntang

  committed
  d7a4b6e

  Copy full SHA for d7a4b6e

• add minn leaching option for betr

  jinyuntang

  committed
  2195f91

  Copy full SHA for 2195f91

Commits on May 15, 2015

• bug fix after add bgc_sminn

  jinyuntang

  committed
  a4b147e

  Copy full SHA for a4b147e

• fixed mass bal bug for betr_sminn

  jinyuntang

  committed
  78c8f98

  Copy full SHA for 78c8f98

• betr_sminn finally works smoothly

  jinyuntang

  committed
  b5f4678

  Copy full SHA for b5f4678

Commits on May 16, 2015

• bug fix for betr cent in calculating nitrogen preference

  jinyuntang

  committed
  d8fc221

  Copy full SHA for d8fc221

Commits on May 17, 2015

• implemented the clm4.5 nutrient downregulation scheme

  jinyuntang

  committed
  8863f08

  Copy full SHA for 8863f08

Commits on May 18, 2015

• code is running after implmenting new nutrient limitation scheme

  jinyuntang

  committed
  d57cb5c

  Copy full SHA for d57cb5c

• reorganized betr directory

  jinyuntang

  committed
  e8e06ce

  Copy full SHA for e8e06ce

• added another two nutrient limitation algorithms

  jinyuntang

  committed
  8547673

  Copy full SHA for 8547673

• added new betr code directory

  jinyuntang

  committed
  dee1f73

  Copy full SHA for dee1f73

• bug fix for alternative bgc options

  jinyuntang

  committed
  210720c

  Copy full SHA for 210720c

• bug fix and add annotations for n-limit implementation

  jinyuntang

  committed
  dcec943

  Copy full SHA for dcec943

Commits on May 21, 2015

• add code to start uncertainty assessment of C-N coupling

  jinyuntang

  committed
  31f485e

  Copy full SHA for 31f485e

• bug fix after initializing the c-n uncertainty assessment

  jinyuntang

  committed
  b86c592

  Copy full SHA for b86c592

• reordered the external om pool input after decomposition

  jinyuntang

  committed
  7fe31e6

  Copy full SHA for 7fe31e6

• bug fix after code reordering in bgc_cent

  jinyuntang

  committed
  985fb33

  Copy full SHA for 985fb33

Commits on May 22, 2015

• add the carbon only mode for betr cent

  jinyuntang

  committed
  6bd769b

  Copy full SHA for 6bd769b

• Merge branch 'jinyuntang/lnd/betr' of github.com:jinyuntang/ACME into jinyuntang/lnd/betr

  jinyuntang

  committed
  f64f7cb

  Copy full SHA for f64f7cb

• bug fix after adding the carbon only mode for betr_bgc

  jinyuntang

  committed
  6e83444

  Copy full SHA for 6e83444

• bug fix after enabling carbon only mode

  jinyuntang

  committed
  754bbbf

  Copy full SHA for 754bbbf

• some typo fixes

  jinyuntang

  committed
  7a60f57

  Copy full SHA for 7a60f57

• Merge branch 'jinyuntang/lnd/betr' of github.com:jinyuntang/ACME into jinyuntang/lnd/betr

  jinyuntang

  committed
  136d0e6

  Copy full SHA for 136d0e6

Commits on May 27, 2015

• carbon only mode now works for BGCReactionsCenturyCLMType

  jinyuntang

  committed
  89fe2b3

  Copy full SHA for 89fe2b3

• Merge branch 'jinyuntang/lnd/betr' of github.com:jinyuntang/ACME into jinyuntang/lnd/betr

  jinyuntang

  committed
  43d612a

  Copy full SHA for 43d612a

Commits on May 28, 2015

• add carbon only mode to BGCReactionsCenturyType

  jinyuntang

  committed
  6a01024

  Copy full SHA for 6a01024

Commits on May 29, 2015

• bug fix for betr_cent

  Show description for 346da91
  jinyuntang

  committed
  346da91

  Copy full SHA for 346da91

• bug fix for betr transport

  Show description for c984573
  jinyuntang

  committed
  c984573

  Copy full SHA for c984573

Commits on May 30, 2015

• add ET based N fixation algorithm

  jinyuntang

  committed
  b4a4045

  Copy full SHA for b4a4045

Commits on Jun 25, 2015

• bug fix for BGCReactionsCenturyCLMType.F90

  jinyuntang

  committed
  f12e4e2

  Copy full SHA for f12e4e2

• bug fix for BGCReactionsCenturyType.F90

  jinyuntang

  committed
  c5560c4

  Copy full SHA for c5560c4

• turn off carbon_only mode

  jinyuntang

  committed
  bb2021a

  Copy full SHA for bb2021a

Commits on Jun 26, 2015

• remove obsolete comments

  jinyuntang

  committed
  d64b310

  Copy full SHA for d64b310

• add et based nfix

  jinyuntang

  committed
  97a2743

  Copy full SHA for 97a2743

• bug fix for undefined tracer

  jinyuntang

  committed
  beadc88

  Copy full SHA for beadc88

Commits on Jul 1, 2015

• remove obsolete types and upgrade BGCReactionsCenturyType.F90

  jinyuntang

  committed
  afada45

  Copy full SHA for afada45

• reset default minN priority for competitors

  jinyuntang

  committed
  be81573

  Copy full SHA for be81573

Commits on Jul 14, 2015

• prepare for full reaction based substrate limitation

  jinyuntang

  committed
  f4d8a6a

  Copy full SHA for f4d8a6a

• remove obsolete files

  jinyuntang

  committed
  7052e03

  Copy full SHA for 7052e03

• implementing ECA for nitrogen competition

  jinyuntang

  committed
  1041bcc

  Copy full SHA for 1041bcc

Commits on Jul 19, 2015

• bug fix for ECA preimplementation

  jinyuntang

  committed
  b06bf0d

  Copy full SHA for b06bf0d

Commits on Jul 20, 2015

• bug fix for negative tracer

  jinyuntang

  committed
  626c2e4

  Copy full SHA for 626c2e4

Commits on Jul 21, 2015

• create new CLM3 type for intermediate N mobilizer-immobilizer coupling

  jinyuntang

  committed
  9963d1e

  Copy full SHA for 9963d1e

• add clm3 type

  jinyuntang

  committed
  332b488

  Copy full SHA for 332b488

Commits on Jul 24, 2015

• clm3 implementation finished

  jinyuntang

  committed
  4acf520

  Copy full SHA for 4acf520

• comment out some debugging code in bgc_cent

  jinyuntang

  committed
  3ac90fa

  Copy full SHA for 3ac90fa

Commits on Jul 28, 2015

• ECA update

  jinyuntang

  committed
  9119950

  Copy full SHA for 9119950

Commits on Jul 30, 2015

• debug ECA enabled bgc

  jinyuntang

  committed
  be8a501

  Copy full SHA for be8a501

Commits on Jul 31, 2015

• avoid roundoff deadlock in one_box_bgc for ECA bgc

  jinyuntang

  committed
  f8513b4

  Copy full SHA for f8513b4

Commits on Aug 3, 2015

• ECA running

  jinyuntang

  committed
  19a89fe

  Copy full SHA for 19a89fe

• add type clmo

  jinyun1tang

  committed
  dab93ac

  Copy full SHA for dab93ac

Commits on Aug 4, 2015

• bug fix for clmo and all reaction based bgc

  jinyuntang

  committed
  d6b60f3

  Copy full SHA for d6b60f3

Commits on Oct 3, 2015

• add a smoother to avoid excessive velocity spike in advective tracer transport

  jinyuntang

  committed
  3c9e6a8

  Copy full SHA for 3c9e6a8

Commits on Oct 10, 2015

• prepare to add tagged h2o tracers

  jinyun1tang

  committed
  5656685

  Copy full SHA for 5656685

Commits on Oct 14, 2015

• Removes few unwanted files

  Show description for 9cfd62b
  

  Gautam Bisht

  committed
  9cfd62b

  Copy full SHA for 9cfd62b

• Removes commented out debugging lines from BeTR code

  

  Gautam Bisht

  committed
  f1a30f0

  Copy full SHA for f1a30f0

• Fixes a compiler error in BeTR code

  Show description for 11ced6f
  

  Gautam Bisht

  committed
  11ced6f

  Copy full SHA for 11ced6f

• Corrects indenting of ALM source code

  

  Gautam Bisht

  committed
  bb2bb6d

  Copy full SHA for bb2bb6d

• remove obsolete comments and codes, add subrtouine heads

  jinyun1tang

  committed
  d70ee08

  Copy full SHA for d70ee08

• Merge branch 'bishtgautam/lnd/betr' of https://github.com/ACME-Climate/ACME into bishtgautam/lnd/betr

  jinyun1tang

  committed
  09d5282

  Copy full SHA for 09d5282

Commits on Oct 15, 2015

• fix two typos from the cleanup, now it compiles without any problem.

  jinyun1tang

  committed
  489b336

  Copy full SHA for 489b336

• add indenting line breaks to code in betr

  jinyun1tang

  committed
  77d2def

  Copy full SHA for 77d2def

• typo bug fix

  jinyuntang

  committed
  0328367

  Copy full SHA for 0328367

• resolve conflict after indenting

  jinyuntang

  committed
  b1168b4

  Copy full SHA for b1168b4

• further indenting and resolving a conflict in DOEMod.F90

  jinyun1tang

  committed
  3fe7ca7

  Copy full SHA for 3fe7ca7

• further indenting

  jinyun1tang

  committed
  d49b587

  Copy full SHA for d49b587

• Fixes indenting for BeTR source-code

  

  Gautam Bisht

  committed
  5ddd12e

  Copy full SHA for 5ddd12e

• Merge branch 'bishtgautam/lnd/betr' of github.com:ACME-Climate/ACME into bishtgautam/lnd/betr

  Show description for 864dbfb
  

  Gautam Bisht

  committed
  864dbfb

  Copy full SHA for 864dbfb

• Merge branch 'bishtgautam/lnd/betr' into jinyuntang/lnd/betr

  

  Gautam Bisht

  committed
  ce09894

  Copy full SHA for ce09894

Commits on Oct 16, 2015

• revert some bug fixers to soil hydrology from the introduction of BeTR. Now these fixes are protected

  jinyuntang

  committed
  1bc6a01

  Copy full SHA for 1bc6a01

• Merge branch 'bishtgautam/lnd/betr' of https://github.com/ACME-Climate/ACME into jinyuntang/lnd/betr

  jinyun1tang

  committed
  07bcb6b

  Copy full SHA for 07bcb6b

• revert the compiler setup in env_mach_specific.edison

  jinyun1tang

  committed
  be0d6ed

  Copy full SHA for be0d6ed

Commits on Oct 28, 2015

• Reverts machine file for Edison

  Show description for ac3840f
  

  Gautam Bisht

  committed
  ac3840f

  Copy full SHA for ac3840f