Update CIME to ESMCI cime5.8.7-2 #3126
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Update modules on cori-haswell and cori-knl Test suite: scripts_regression_tests.py on cori Test baseline: Test namelist changes: Test status: roundoff Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
Update modules for centos7-linux, fix py3 error in case_run.py Test suite: scripts_regression_tests.py on centos7-linux and using python 3.6.5, also tested with python 2.7.9 Test baseline: Test namelist changes: Test status: roundoff on centos7-linux Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
…-for-mpi-only-runs Omit OMP_NUM_THREADS in MPI-only runs Test suite: SMS.f19_g16.X Test baseline: mpi-only vs. threaded Test namelist changes: none Test status: [bit for bit] Fixes #3082 User interface changes?: none Update gh-pages html (Y/N)?: N
modified: cime/config/e3sm/allactive/config_pesall.xml
Nuopc build fixes Rework nuopc build to put more logic in Makefile and less in buildexe, i hope this helps make clear what is happening. Test suite: scripts_regression_tests.py nuopc testing Test baseline: Test namelist changes: Test status: bit for bit Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
First fix was not py2 compatible, this one is. Test suite: tested SMS.f09_g16.X by hand on chenne Test baseline: Test namelist changes: Test status: bit for bit Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
Update Spectrum MPI module for PGI, XL and GNU. Update XL version which has compatible parallel-netcdf install. Update parallel-netcdf module.
Setting NetCDF paths from env vars defined in machine file.
Previously, OOM errors were encountered with spectrum-mpi module. That necessitated a flag to use earlier version of romio. With the MPI update, this is no longer needed.
We use a wrapper script for jsrun options on Summit. Moving it to stable location under cli115. Removing csc190 references.
…9-08-07 Jgfouca/branch for acme split 2019 08 07 No general changes Test suite: ./scripts_regression_tests Test baseline: Test namelist changes: Test status: [bit for bit, roundoff, climate changing] Fixes [CIME Github issue #] User interface changes?: Update gh-pages html (Y/N)?: Code review:
overindented line fixed Fix an indentation issue Test suite: by hand Test baseline: Test namelist changes: Test status: bit for bit Fixes this thing which is a comment and not an issue - please don't do this: 773e629?email_source=notifications&email_token=ABOXUGDSWZK3VQ45ULFFEZ3QDMYYDA5CNFSM4IKEFL6KYY3PNVWWK3TUL52HS4DFVVBW63LNNF2EG33NNVSW45FKMNXW23LFNZ2F62LEZYBBAH5S#commitcomment-34611122 User interface changes?: Update gh-pages html (Y/N)?: Code review:
…vement improve the config_compilers.xml schema Fix indentation problem in compilers.py and make sure that the ~/.cime/config_compilers.xml file is also checked Test suite: scripts_regression_tests.py Test baseline: Test namelist changes: Test status: bit for bit Fixes #3175 User interface changes?: Update gh-pages html (Y/N)?: Code review:
update ncpl and cpl_seq_option for mom6 Updates ATM_NCPL, OCN_NCPL, ROF_NCPL, and CPL_SEQ_OPTION for MOM6. Test suite: aux_mom Test baseline: /glade/scratch/altuntas/cesm.tests/cheyenne/aux_mom/190808 Test namelist changes: no changes (except mom6 cases) Test status: : bit for bit (except mom6 cases) User interface changes?: N Update gh-pages html (Y/N)?: N Code review:
…branch-for-to-acme-2019-08-14 * commit '1c663d0e30234ff85ec5c205dfbd101dcf62d639': (3218 commits) update ncpl and cpl_seq_option for mom6 overindented line fixed improve the config_compilers.xml schema async interface not working Squashed 'src/externals/pio2/' changes from 6f0afaa48..20457f902 Specify recursive doubling for MPI_Allreduce on Compy make sure output_root path is abspath Update CIME to ESMCI cime5.8.7 (#3092) Add number of nodes to srun on Anvil Use correct mask for ne16pg3 resolution Add env var setting for PERL as a work-around while NERSC completes SW maint. Add back in the module load of git. When Cori first came back online, this module was missing. Updated module versions for Cori (KNL and haswell) after Cori maint. clean up moving ERS tests to eam_theta Update Livermore Computing machine file entries. Add default S, M, and L pecounts for oEC60to30v3 G-cases on compy Point to new mapping files for r05 <-> f10 mapping Disable compiler checks that happen upon cmake launch Fix some test fails ...
jgfouca
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Aug 15, 2019
Update CIME to ESMCI cime5.8.7-2 Squash merge of jgfouca/branch-for-to-acme-2019-08-14 Features: * Update to latest NCAR PIO2 version * improve the config_compilers.xml schema to catch case errors Bug fixes: * make sure output_root path is abspath * make sure ~/.cime/config_compilers.xml file is also checked against schema * fix indentation bug in get_timing [BFB]
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Squash merged to next. |
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@sarats , it fixes this bug: |
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@jgfouca , what caused this bug? Any idea? |
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@worleyph , no idea off the top of my head. ^ may reveal the answer. |
jgfouca
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Aug 16, 2019
preview_run: Fix case where mpirun cmd uses env vars The mpirun cmd was being retrieved before the full environment was being loaded, leading to unresolved env vars appearing in the command. [BFB] * origin/jgfouca/cime/fix_prev_run_env_vars: preview_run: Fix case where mpirun cmd uses env vars Update CIME to ESMCI cime5.8.7-2 (PR #3126)
jgfouca
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Aug 16, 2019
preview_run: Fix case where mpirun cmd uses env vars The mpirun cmd was being retrieved before the full environment was being loaded, leading to unresolved env vars appearing in the command. [BFB] * origin/jgfouca/cime/fix_prev_run_env_vars: preview_run: Fix case where mpirun cmd uses env vars Update CIME to ESMCI cime5.8.7-2 (PR #3126)
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@worleyph Looks like bug was introduced in ESMCI/cime@773e629 |
rljacob
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Apr 12, 2021
Update CIME to ESMCI cime5.8.7-2 Squash merge of jgfouca/branch-for-to-acme-2019-08-14 Features: * Update to latest NCAR PIO2 version * improve the config_compilers.xml schema to catch case errors Bug fixes: * make sure output_root path is abspath * make sure ~/.cime/config_compilers.xml file is also checked against schema * fix indentation bug in get_timing [BFB]
rljacob
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Apr 21, 2021
Nuopc cmeps removed. Remove the nuopc driver and mediator to a separate repository https://github.com/ESCOMP/CMEPS.git Test suite: scripts_regression_tests.py Test baseline: Test namelist changes: Test status: bit for bit Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
rljacob
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that referenced
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Apr 21, 2021
Update CIME to ESMCI cime5.8.7-2 Squash merge of jgfouca/branch-for-to-acme-2019-08-14 Features: * Update to latest NCAR PIO2 version * improve the config_compilers.xml schema to catch case errors Bug fixes: * make sure output_root path is abspath * make sure ~/.cime/config_compilers.xml file is also checked against schema * fix indentation bug in get_timing [BFB]
rljacob
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that referenced
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May 6, 2021
Nuopc cmeps removed. Remove the nuopc driver and mediator to a separate repository https://github.com/ESCOMP/CMEPS.git Test suite: scripts_regression_tests.py Test baseline: Test namelist changes: Test status: bit for bit Fixes User interface changes?: Update gh-pages html (Y/N)?: Code review:
rljacob
pushed a commit
that referenced
this pull request
May 6, 2021
Update CIME to ESMCI cime5.8.7-2 Squash merge of jgfouca/branch-for-to-acme-2019-08-14 Features: * Update to latest NCAR PIO2 version * improve the config_compilers.xml schema to catch case errors Bug fixes: * make sure output_root path is abspath * make sure ~/.cime/config_compilers.xml file is also checked against schema * fix indentation bug in get_timing [BFB]
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Update CIME to ESMCI cime5.8.7-2
Squash merge of jgfouca/branch-for-to-acme-2019-08-14
Features:
Bug fixes:
[BFB]