Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

EOS/Titan: starting a job with ./case.submit doen't work #1302

Closed
kaizhangpnl opened this issue Mar 9, 2017 · 1 comment
Closed

EOS/Titan: starting a job with ./case.submit doen't work #1302

kaizhangpnl opened this issue Mar 9, 2017 · 1 comment

Comments

@kaizhangpnl
Copy link
Contributor

kaizhangpnl commented Mar 9, 2017

I am using the master checked out today. The model was compiled well, but when I ran the model (./case.submit) , I got a single line error message:

"ERROR: Python 2, minor version 7+ is required, you have 2.6"

I already loaded "python/2.7.9". I also put "module load python/2.7.9" in my csh and bash shell environment. The python version shown in "env_mach_specific.xml", "env_mach_specific.sh", and "software_environment.txt" looks correct too.


./env_mach_specific.xml: <init_path lang="python">$MODULESHOME/init/python.py</init_path>
./env_mach_specific.xml: <cmd_path lang="python">$MODULESHOME/bin/modulecmd python</cmd_path>
./env_mach_specific.xml: python/2.7.9
./case.run:#!/usr/bin/env python
./case.st_archive:#!/usr/bin/env python
./case.lt_archive:#!/usr/bin/env python
./.env_mach_specific.sh:module load python/2.7.9./.env_mach_specific.csh:module load python/2.7.9./software_environment.txt: 25) python/2.7.9./software_environment.txt:MANPATH=/sw/xc30/cmake/2.8.11.2/sles11.2_gnu4.3.4/share/man:/opt/cray/parallel-netcdf/1.6.1/man:/opt/cray/netcdf/4.3.3.1/share/man:/opt/cray/papi/5.5.0.2/man:/opt/intel/compilers_and_libraries_2016.1.150/linux/mpi/man:/opt/intel/compilers_and_libraries_2016.1.150/linux/man/en_US:/opt/intel/documentation_2016/en/debugger//gdb-ia/man/:/opt/intel/documentation_2016/en/debugger//gdb-mic/man/:/opt/intel/documentation_2016/en/debugger//gdb-igfx/man/:/sw/xc30/python/2.7.9/sles11.3_gnu4.8.2/share/man:/lustre/atlas/sw/xk7/python/2.7.9/sles11.3_gnu4.8.2/share/man:/sw/xc30/environment-modules/3.2.10.3/sles11.3_gnu4.9.0/share/man:/sw/sources/hpss/man:/sw/xc30/man:/sw/xc30/hsi/5.0.2.p1/sles11.5/man:/sw/xc30/lustredu/1.4/sles11.3_gnu4.8.2/man:/opt/cray/atp/2.0.5/man:/opt/cray/alps/5.2.4-2.0502.9774.31.11.ari/man:/opt/cray/pmi/5.0.11/man:/opt/intel/documentation_2017/en/debugger/gdb-igfx/man:/opt/cray/mpt/7.5.2/gni/man/mpich:/opt/cray/craype/2.5.9/man:/opt/cray/eslogin/eswrap/1.3.3-1.020200.1278.0/man:/opt/modules/3.2.10.5/share/man:/opt/cray/share/man:/usr/share/man:/usr/share/man:/usr/local/man:/usr/man:/opt/cray/share/man:/cm/local/apps/environment-modules/current/share/man:/opt/cray/man./software_environment.txt:_LMFILES_001=intel/5.2.82:/sw/xc30/modulefiles/lustredu/1.4:/sw/xc30/modulefiles/xalt/0.7.5:/sw/xc30/modulefiles/module_msg/0.1:/sw/xc30/modulefiles/modulator/1.2.0:/sw/xc30/modulefiles/hsi/5.0.2.p1:/sw/xc30/modulefiles/DefApps:/opt/cray/modulefiles/cray-netcdf/4.3.3.1:/sw/xc30/modulefiles/python/2.7.9

@kaizhangpnl
Copy link
Contributor Author

I modified case.submit to manually change the python library path. It solved the problem for now.

agsalin pushed a commit that referenced this issue Apr 13, 2017
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant