docs: simplify default tool configurations and update documentation

[mrT23]

PR Type

Documentation, Enhancement

---

Description

• Simplified default tool configurations by removing specific parameter overrides, making them more maintainable and consistent across different platforms
• Enhanced documentation clarity for GitHub app automatic tools:
  • Updated configuration file references
  • Added clear examples for customizing automated runs
  • Improved explanation of PR commands and their behavior
• Standardized tool execution commands across GitHub, GitLab, and BitBucket platforms
• Removed redundant configuration parameters while maintaining core functionality

---

Changes walkthrough 📝

	Relevant files
Documentation	automations_and_usage.md Improved documentation for GitHub app automatic tools configuration docs/docs/usage-guide/automations_and_usage.md Updated GitHub app configuration section with clearer examples Simplified explanation of automatic tool execution for new PRs Added information about customizing configurations for automated runs Updated configuration file link reference +14/-10
Configuration changes	configuration.toml Simplified default tool configurations in TOML file            pr_agent/settings/configuration.toml Removed specific parameter overrides from default commands Simplified default tool configurations across GitHub, GitLab, and BitBucket Removed num_code_suggestions=0 and suggestions_score_threshold parameters +8/-8

---

💡 PR-Agent usage: Comment /help "your question" on any pull request to receive relevant information

[qodo-merge-pro-for-open-source]

PR Reviewer Guide 🔍

Here are some key observations to aid the review process:

⏱️ Estimated effort to review: 1 🔵⚪⚪⚪⚪

🏅 Score: 95

🧪 No relevant tests

🔒 No security concerns identified

⚡ Recommended focus areas for review Documentation Clarity Verify that the new configuration examples are accurate and match the actual behavior of the tools

[qodo-merge-pro-for-open-source]

PR Code Suggestions ✨

Explore these optional code suggestions:

Category	Suggestion	Score
General	Maintain explicit control over automated code suggestion generation to prevent unexpected behavior Consider keeping the num_code_suggestions parameter in the /review command to prevent potential unwanted code suggestions in automated reviews. Its removal could lead to unexpected behavior. pr_agent/settings/configuration.toml [220-224] pr_commands = [ "/describe --pr_description.final_update_message=false", - "/review", + "/review --pr_reviewer.num_code_suggestions=0", "/improve", ] Apply this suggestion Suggestion importance[1-10]: 8 Why: The suggestion correctly identifies a potential issue where removing the explicit num_code_suggestions=0 parameter could lead to unexpected automated code suggestions in reviews. This is a significant change that affects the default behavior of the review tool across all platforms.	8

• Author self-review: I have reviewed the PR code suggestions, and addressed the relevant ones.