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Virtual Gram staining of label-free bacteria using CGANs

DOI

This repository contains the test code and trained checkpoints of Virtual Gram staining of label-free bacteria using darkfield microscopy and deep learning.

A Conditional GAN was trained to perform virtual Gram staining of label-free bacteria.

Input images
Output images
Target images

How to start

  • Download test data and checkpoints from this link or this Zenodo link
  • Move test_data and ckpts folders into the repository folder.
  • Run test_npy.py file in your CPU or GPU.

Requirements

  • Tensorflow 2.10
  • Python 3.9.17

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