script for dataset preprocessing

[dlopez-bioinfo]

Create a preprocessing script to format datasets with necessary metadata for GRN analysis and generative AI models with downstream metrics.

• input:
  • id or URL to download the datasets
• output:
  • preprocessed dataset (common format)
  • Common formatted dataset with metadata.

[dlopez-bioinfo]

metadata format is under definition

[marinaEM]

Contribution Guidelines

1. Initial Setup

   • Clone the repository: git clone <repository_url>

2. Update Local Content

   • Ensure you’re up to date with the development branch:

     git checkout devel
     git pull origin devel

3. Create a New Branch

   • Create a descriptive branch for your work:

     git checkout -b <branch_name>

4. Commit & Push Changes

   • Stage and commit your changes with clear messages:

     git add <file_name>
     git commit -m "Brief description of changes"

   • Push to GitHub:

     git push origin <branch_name>

5. Create a Pull Request

   • Target the devel branch for merging.
   • Follow the PR template, review, and submit.

6. Final Merge & Update

   • Once approved, merge your PR and delete your branch if desired.
   • Update your local repository:

     git checkout devel
     git pull origin devel

By following these steps, you contribute effectively and collaboratively.