Merge pull request #44 from AlexsLemonade/update-methods

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Merge pull request #44 from AlexsLemonade/update-methods

add-lancet-vardict-ngscheck-links-clin-harm

citations.tsv

@@ -3,13 +3,15 @@ arxiv:1303.3997	arxiv:1303.3997	arxiv:1303.3997	gmH6YDca
 doi:10.1002/ijc.32258	doi:10.1002/ijc.32258	doi:10.1002/ijc.32258	BLNV1DbL
 doi:10.1038/nbt.3519	doi:10.1038/nbt.3519	doi:10.1038/nbt.3519	12KZMHMQl
 doi:10/gdwrp4	doi:10/gdwrp4	doi:10.1038/s41592-018-0051-x	REfkDUtE
+doi:10.1038/s42003-018-0023-9	doi:10.1038/s42003-018-0023-9	doi:10.1038/s42003-018-0023-9	V6KdWVYi
 doi:10/c6bcps	doi:10/c6bcps	doi:10.1093/bioinformatics/btq635	1F3i4BvCt
 doi:10/ckt4vz	doi:10/ckt4vz	doi:10.1093/bioinformatics/btr670	ZQ0L3o1q
 doi:10/f4h523	doi:10/f4h523	doi:10.1093/bioinformatics/bts635	tTu8Ds9Z
 doi:10/f6kft3	doi:10/f6kft3	doi:10.1093/bioinformatics/btu314	IzUbOv92
 doi:10/gfzsfw	doi:10/gfzsfw	doi:10.1093/bioinformatics/btv098	PcJwlZj3
 doi:10/gf3ggb	doi:10/gf3ggb	doi:10.1093/bioinformatics/btv710	kTn1PIj5
 doi:10.1093/nar/gkw1083	doi:10.1093/nar/gkw1083	doi:10.1093/nar/gkw1083	FLBuvqQe
+doi:10.1093/nar/gkw227	doi:10.1093/nar/gkw227	doi:10.1093/nar/gkw227	trQRR8fs
 doi:10.1101/120295	doi:10.1101/120295	doi:10.1101/120295	rqYlIiAi
 doi:10.1101/656587	doi:10.1101/656587	doi:10.1101/656587	v08ocfr0
 doi:10/cwg8n5	doi:10/cwg8n5	doi:10.1186/1471-2105-12-323	Dh2n1EV3
@@ -19,8 +21,11 @@ doi:10.1371/journal.pcbi.1004873	doi:10.1371/journal.pcbi.1004873	doi:10.1371/jo
 pmid:19505943	pmid:19505943	pmid:19505943	hNfNHk9L
 url:http://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/	url:http://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/	url:http://hgdownload.soe.ucsc.edu/goldenPath/hg38/bigZips/	1AWRgvxVu
 url:https://cbttc.org	url:https://cbttc.org	url:https://cbttc.org	ME49zC7J
+url:https://github.com/AstraZeneca-NGS/VarDictJava	url:https://github.com/AstraZeneca-NGS/VarDictJava	url:https://github.com/AstraZeneca-NGS/VarDictJava	1GMHnwH5p
 url:https://github.com/broadinstitute/gatk/blob/4.1.1.0/scripts/mutect2_wdl/mutect2.wdl	url:https://github.com/broadinstitute/gatk/blob/4.1.1.0/scripts/mutect2_wdl/mutect2.wdl	url:https://github.com/broadinstitute/gatk/blob/4.1.1.0/scripts/mutect2_wdl/mutect2.wdl	E5aTvXmQ
 url:https://github.com/mskcc/vcf2maf	url:https://github.com/mskcc/vcf2maf	url:https://github.com/mskcc/vcf2maf	11Fn5jqUI
+url:https://github.com/nygenome/lancet	url:https://github.com/nygenome/lancet	url:https://github.com/nygenome/lancet	dYF6AyBo
+url:https://github.com/parklab/NGSCheckMate	url:https://github.com/parklab/NGSCheckMate	url:https://github.com/parklab/NGSCheckMate	16tUBMk59
 url:https://kidsfirstdrc.org	url:https://kidsfirstdrc.org	url:https://kidsfirstdrc.org	JkpD6jMa
 url:https://software.broadinstitute.org/gatk/	url:https://software.broadinstitute.org/gatk/	url:https://software.broadinstitute.org/gatk/	RsmkaFIb
 url:https://software.broadinstitute.org/gatk/best-practices/workflow?id	url:https://software.broadinstitute.org/gatk/best-practices/workflow?id	url:https://software.broadinstitute.org/gatk/best-practices/workflow?id	EHMzG34o