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V22 chordoma subtyping (7/N) #1440

Merged
merged 22 commits into from
Jun 6, 2022
Merged

V22 chordoma subtyping (7/N) #1440

merged 22 commits into from
Jun 6, 2022

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jharenza
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Purpose/implementation Section

What scientific question is your analysis addressing?

v22 chordoma subtyping

What was your approach?

What GitHub issue does your pull request address?

#1426

Directions for reviewers. Tell potential reviewers what kind of feedback you are soliciting.

Which areas should receive a particularly close look?

NA, no changes

Is there anything that you want to discuss further?

Is the analysis in a mature enough form that the resulting figure(s) and/or table(s) are ready for review?

Results

What types of results are included (e.g., table, figure)?

What is your summary of the results?

Reproducibility Checklist

  • The dependencies required to run the code in this pull request have been added to the project Dockerfile.
  • This analysis has been added to continuous integration.

Documentation Checklist

  • This analysis module has a README and it is up to date.
  • This analysis is recorded in the table in analyses/README.md and the entry is up to date.
  • The analytical code is documented and contains comments.

@jharenza jharenza changed the base branch from master to v22-emb May 26, 2022 20:32
@jharenza jharenza changed the title V22 chordoma subtyping V22 chordoma subtyping (7/N) May 26, 2022
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@jaclyn-taroni jaclyn-taroni left a comment

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👍🏻 we might expect changes in analyses/molecular-subtyping-chordoma/chordoma-subset/chordoma-only_cn_autosomes.tsv.gz because consensus_seg_annotated_cn_autosomes.tsv.gz is getting updated in v22 (#1412 (comment)) and there no change in the overall results of the module

@jharenza jharenza merged commit d51f501 into v22-emb Jun 6, 2022
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2 participants