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news.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no" />
<meta name="description" content="Yuki KATO" />
<meta name="author" content="Yuki KATO" />
<title>Yuki KATO, Ph.D.</title>
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<h1>News</h1>
<span class="subheading">All</span>
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<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">The website has been overhauled.</h3>
<p class="post-meta">
Posted on 2025-01-01
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">My research profile has been reported in <a href="https://www.ccb.osaka-u.ac.jp/en/wpccb_handle/wp-content/uploads/2024/03/KatoYuki2024EN.pdf">[Research Profiles 2024]</a> released by Co-Creation Bureau, The University of Osaka.</h3>
<p class="post-meta">
Posted on 2024-04-01
</p>
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<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">A graduate student in my group gave an oral presentation on his study at <a href="https://www.ipsj.or.jp/kenkyukai/event/mps147bio77.html">[IPSJ SIGBIO77]</a> (in Japanese).</h3>
<p class="post-meta">
Posted on 2024-03-07
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Our single-cell comparative analysis tool CAPITAL has been summarized in a <a href="https://ifremed.otri.osaka-u.ac.jp/member/mp4/Movie_Yuki_Kato.mp4">[video abstract]</a>.</h3>
<p class="post-meta">
Posted on 2023-05-25
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">The tool <a href="https://github.com/ykat0/capital">[CAPITAL]</a> for aligning pseudotime trajectory trees has been updated.</h3>
<p class="post-meta">
Posted on 2023-03-22
</p>
</div>
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<hr class="my-4" />
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<h3 class="post-title">I gave a talk in a <a href="https://gakumon.celas.osaka-u.ac.jp/news/report/20230314/">[Symposium on "A Door to Academia"]</a>, The University of Osaka.</h3>
<p class="post-meta">
Posted on 2023-03-14
</p>
</div>
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<hr class="my-4" />
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<h3 class="post-title">My class "A Door to Academia (Algorithmic Problem Solving with Puzzles)" has been reported in the website of <a href="https://gakumon.celas.osaka-u.ac.jp/class/sciences/post-13/">[A Door to Academia]</a>, The University of Osaka (in Japanese).</h3>
<p class="post-meta">
Posted on 2022-12-12
</p>
</div>
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<hr class="my-4" />
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<h3 class="post-title">Our recent work on single-cell comparative analysis has been reported in websites of The University of Osaka <a href="https://resou.osaka-u.ac.jp/ja/research/2022/20221014_2">[ResOU]</a> and <a href="https://www.med.osaka-u.ac.jp/eng/activities/results/2022year/kato2022-10-17">[Graduate School of Medicine]</a>.</h3>
<p class="post-meta">
Posted on 2022-10-21
</p>
</div>
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<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">I gave a talk in <a href="http://www.ifrec.osaka-u.ac.jp/symposium/ngs_expo/index.html">[NGS EXPO 2022]</a>.</h3>
<p class="post-meta">
Posted on 2022-10-19
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">Our recent work on single-cell comparative analysis has been published in <a href="https://www.nature.com/articles/s41467-022-33681-3">[Nature Communications]</a>.</h3>
<p class="post-meta">
Posted on 2022-10-14
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<h3 class="post-title">I have been promoted to Associate Professor, <a href="https://www.med.osaka-u.ac.jp/eng/">[Graduate School of Medicine]</a>, The University of Osaka.</h3>
<p class="post-meta">
Posted on 2022-04-01
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">My profile has been shown in a Japanese <a href="https://ifremed.otri.osaka-u.ac.jp/profile2022/index.html?page=16#page=17">[digital book]</a> published by Integrated Frontier Research for Medical Science Division (iFremed), Institute for Open and Transdisciplinary Research Initiatives (OTRI), The University of Osaka.</h3>
<p class="post-meta">
Posted on 2022-03-24
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">Our recent work on RNA structure prediction collaborated with Keio University has been reported in <a href="https://www.nikkei.com/article/DGXLRSP619040_W1A001C2000000/">[NIKKEI]</a>, <a href="https://bio.nikkeibp.co.jp/atcl/release/21/10/06/11695/">[Nikkei Biotechnology & Business]</a>, and <a href="https://www.nikkan.co.jp/articles/view/00614965">[Nikkan]</a>.</h3>
<p class="post-meta">
Posted on 2021-10-14
</p>
</div>
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<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">Our recent work on RNA structure prediction has been reported in the website of <a href="https://resou.osaka-u.ac.jp/ja/research/2021/20211006_2">[The University of Osaka]</a>.</h3>
<p class="post-meta">
Posted on 2021-10-06
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">The web server <a href="https://ws.sato-lab.org/rtips/ipknot++/">[IPknot++]</a> for fast and accurate prediction of RNA secondary structures for long sequences has been released.</h3>
<p class="post-meta">
Posted on 2021-08-11
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
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<div class="post-preview">
<h3 class="post-title">I have also been with <a href="https://ifremed.otri.osaka-u.ac.jp/">[Integrated Frontier Research for Medical Science Division (iFremed)]</a>, Institute for Open and Transdisciplinary Research Initiatives (OTRI), The University of Osaka.</h3>
<p class="post-meta">
Posted on 2020-09-01
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Our recent work on single-cell pseudotime analysis has been reported in the website of <a href="http://www.hpc.cmc.osaka-u.ac.jp/en/hpsc-news/vol08/">[Cybermedia Center]</a>, The University of Osaka, and <a href="https://www.youtube.com/watch?v=yN1fkg2tjzA">[YouTube]</a> in Japanese.</h3>
<p class="post-meta">
Posted on 2020-06-08
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">My class "A Door to Academia (Algorithmic Problem Solving with Puzzles)" has been reported in the website of <a href="https://www.tlsc.osaka-u.ac.jp/onlinelecture_class/2020/06/class27.html">[Department of Teaching & Learning Support]</a>, The University of Osaka (in Japanese).</h3>
<p class="post-meta">
Posted on 2020-05-21
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Our recent work on genomic variant detection has been published in <a href="https://doi.org/10.1093/bioinformatics/btaa059">[Bioinformatics]</a>.</h3>
<p class="post-meta">
Posted on 2020-05-08
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">An undergraduate student in my group was awarded <a href="https://www.med.osaka-u.ac.jp/wp-content/uploads/2024/05/R5YamamuraPrizeWinner-List2023.pdf">[the 2019 University of Osaka Yamamura Award]</a>.</h3>
<p class="post-meta">
Posted on 2020-03-25
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">An undergraduate student in my group gave an oral presentation on his study at <a href="https://www.ipsj.or.jp/kenkyukai/event/bio61.html">[IPSJ SIGBIO61]</a> (in Japanese).</h3>
<p class="post-meta">
Posted on 2020-03-12
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">The tool <a href="https://github.com/ykat0/bivartect">[Bivartect]</a> for detecting genomic structural variations has been updated.</h3>
<p class="post-meta">
Posted on 2019-10-01
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Undergraduate students in my group gave oral presentations on their studies at <a href="https://www.ipsj.or.jp/kenkyukai/event/bio53.html">[IPSJ SIGBIO53]</a> (in Japanese).</h3>
<p class="post-meta">
Posted on 2018-03-10
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Our recent work on genomic screen for structured RNAs has been published in <a href="https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-017-4309-y">[BMC Genomics]</a>.</h3>
<p class="post-meta">
Posted on 2017-12-03
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">The tool <a href="https://github.com/ykat0/dotcoder">[DotcodeR]</a> for RNA structural similarity search in genomic sequences is now available.</h3>
<p class="post-meta">
Posted on 2017-11-16
</p>
</div>
<!-- Divider-->
<hr class="my-4" />
<!-- Post preview-->
<div class="post-preview">
<h3 class="post-title">Our recent work on RNA-RNA interaction prediction has been published in <a href="https://doi.org/10.1093/bioinformatics/btw603">[Bioinformatics]</a>.</h3>
<p class="post-meta">
Posted on 2017-01-25
</p>
</div>
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<hr class="my-4" />
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<h3 class="post-title">I have moved to Graduate School of Medicine, The University of Osaka, Japan.</h3>
<p class="post-meta">
Posted on 2016-04-01
</p>
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