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DESCRIPTION
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Package: oncoAnalysis
Type: Package
Title: Compare DNA Sequences and Check if Mutated
Version: 0.1.0
Authors@R: person("Xinyi", "Xu",
email = "tiffanyandjojo.xu@mail.utoronto.ca",
role = c("aut", "cre"))
Maintainer: Xu Xinyi <tiffanyandjojo.xu@mail.utoronto.ca>
Description: Compare the two FASTA DNA files, check if the gene of
interest is mutated.
Determine the type of mutation(if exists).
Plot the number of the type of mutations.
License: MIT + file LICENSE
Depends: R (>= 4.0.0)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.2
Roxygen: list(markdown = TRUE)
Imports:
ggplot2 (>= 3.4.0),
seqinr (>= 1.0-2),
shiny (>= 1.7.3),
shinyalert (>= 3.0.0)
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3