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phylonest

Functions to estimate biodiversity at different (hierarchical) scales.

The code is based on the Appendix S6 from Pavoine et al. (2016).

Installation

devtools::install_github("vmikk/phylonest")

Method citation

Pavoine, S., Marcon, E. and Ricotta, C. (2016), ‘Equivalent numbers’ for species, phylogenetic or functional diversity in a nested hierarchy of multiple scales. Methods Ecol Evol, 7: 1152–1163. doi:10.1111/2041-210X.12591