diff --git a/.appveyor.yml b/.appveyor.yml index 77817b746b..140600b77f 100644 --- a/.appveyor.yml +++ b/.appveyor.yml @@ -80,7 +80,6 @@ install: - cmd: if "%TARGET_ARCH%" == "x86" if "%CONDA_PY%" == "27" conda.exe install --quiet --name root mayavi weave - cmd: if "%TARGET_ARCH%" == "x86" if "%FIPY_SOLVERS%" == "pysparse" conda.exe install --quiet --name root pysparse - - cmd: pip install future - cmd: pip install scikit-fmm # Skip .NET project specific build phase. diff --git a/.circleci/config.yml b/.circleci/config.yml index 89677ac53b..6b1233ec92 100644 --- a/.circleci/config.yml +++ b/.circleci/config.yml @@ -38,7 +38,7 @@ commands: command: | conda create -v --quiet --prefix << parameters.condaenv >> --show-channel-urls --channel conda-forge << parameters.packages >> "gmsh<4.0" source activate ~/project/<< parameters.condaenv >> - pip install future + conda remove --quiet --channel conda-forge --force fipy pip install scikit-fmm test_fipy: @@ -63,7 +63,8 @@ commands: - checkout - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -138,22 +139,32 @@ commands: # localize changes to cache name to these two commands save_conda_cache: + parameters: + condaenv: + type: string + default: "test-environment-27" + steps: - save_cache: paths: - /opt/conda - /root/.cache/pip - key: v7-dependencies-{{ arch }} + key: v12-dependencies-{{ arch }}-<< parameters.condaenv >> restore_conda_cache: description: "Restore cache holding conda and pip" + parameters: + condaenv: + type: string + default: "test-environment-27" + steps: - restore_cache: keys: - - v7-dependencies-{{ arch }} + - v12-dependencies-{{ arch }}-<< parameters.condaenv >> # fallback to using the latest cache if no exact match is found - - v7-dependencies- + - v12-dependencies- install_dependencies: steps: @@ -189,7 +200,8 @@ commands: steps: # Download and cache dependencies - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - install_dependencies @@ -199,7 +211,8 @@ commands: - remove_extracted_conda_packages - - save_conda_cache + - save_conda_cache: + condaenv: << parameters.condaenv >> - persist_to_workspace: root: ~/project @@ -251,7 +264,7 @@ jobs: environment: FIPY_SOLVERS: scipy - test-27-trilinos: + test-27-trilinos-serial: <<: *defaults2 steps: @@ -260,7 +273,7 @@ jobs: environment: FIPY_SOLVERS: trilinos - test-27-parallel: + test-27-trilinos-parallel: <<: *defaults2 steps: @@ -271,6 +284,26 @@ jobs: FIPY_SOLVERS: trilinos OMP_NUM_THREADS: 1 + test-27-petsc-serial: + <<: *defaults2 + + steps: + - test_fipy: + condaenv: test-environment-27 + environment: + FIPY_SOLVERS: petsc + + test-27-petsc-parallel: + <<: *defaults2 + + steps: + - test_fipy: + mpirun: "mpirun -np 2" + condaenv: test-environment-27 + environment: + FIPY_SOLVERS: petsc + OMP_NUM_THREADS: 1 + test-36-scipy: <<: *defaults3 @@ -280,13 +313,39 @@ jobs: environment: FIPY_SOLVERS: scipy + test-36-petsc-serial: + <<: *defaults3 + + steps: + - test_fipy: + condaenv: test-environment-36 + environment: + FIPY_SOLVERS: petsc + + test-36-petsc-parallel: + <<: *defaults3 + + steps: + - test_fipy: + mpirun: "mpirun -np 2" + condaenv: test-environment-36 + environment: + FIPY_SOLVERS: petsc + OMP_NUM_THREADS: 1 + pylint: <<: *defaults2 + parameters: + condaenv: + type: string + default: "test-environment-27" + steps: - checkout - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -294,17 +353,23 @@ jobs: - run: name: Lint command: | - source activate ~/project/test-environment-27 + source activate ~/project/<< parameters.condaenv >> pip install pylint pylint setup.py flake8: <<: *defaults2 + parameters: + condaenv: + type: string + default: "test-environment-27" + steps: - checkout - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -312,17 +377,23 @@ jobs: - run: name: Lint command: | - source activate ~/project/test-environment-27 + source activate ~/project/<< parameters.condaenv >> pip install flake8 flake8 setup.py black: <<: *defaults3 + parameters: + condaenv: + type: string + default: "test-environment-36" + steps: - checkout - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -330,17 +401,23 @@ jobs: - run: name: Lint command: | - source activate ~/project/test-environment-36 + source activate ~/project/<< parameters.condaenv >> conda install --channel conda-forge black black --target-version py27 --fast --diff --check setup.py pyspelling: <<: *defaults3 + parameters: + condaenv: + type: string + default: "test-environment-36" + steps: - checkout - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -348,7 +425,7 @@ jobs: - run: name: Spell Check command: | - source activate ~/project/test-environment-36 + source activate ~/project/<< parameters.condaenv >> conda install --channel conda-forge hunspell pip install pyspelling wget -O en_US.aff https://cgit.freedesktop.org/libreoffice/dictionaries/plain/en/en_US.aff?id=a4473e06b56bfe35187e302754f6baaa8d75e54f @@ -358,6 +435,11 @@ jobs: build-27-docs: <<: *defaults2 + parameters: + condaenv: + type: string + default: "test-environment-27" + steps: - checkout @@ -365,7 +447,8 @@ jobs: name: fetch tags command: git fetch origin --tags - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -373,21 +456,26 @@ jobs: - run: name: install sphinx command: | - source activate ~/project/test-environment-27 + source activate ~/project/<< parameters.condaenv >> conda install --channel conda-forge sphinx future pip install 'sphinxcontrib-bibtex<=0.4.2' pip install numpydoc conda install --channel conda-forge matplotlib pandas imagemagick - build_html_docs: - condaenv: test-environment-27 + condaenv: << parameters.condaenv >> - build_pdf_docs: - condaenv: test-environment-27 + condaenv: << parameters.condaenv >> build-36-docs: <<: *defaults3 + parameters: + condaenv: + type: string + default: "test-environment-36" + steps: - checkout @@ -395,7 +483,8 @@ jobs: name: fetch tags command: git fetch origin --tags - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -403,26 +492,40 @@ jobs: - run: name: install sphinx command: | - source activate ~/project/test-environment-36 + source activate ~/project/<< parameters.condaenv >> conda install --channel conda-forge sphinx future pip install sphinxcontrib-bibtex pip install numpydoc conda install --channel conda-forge matplotlib pandas imagemagick - build_html_docs: - condaenv: test-environment-36 + condaenv: << parameters.condaenv >> build-binaries: <<: *defaults3 + parameters: + condaenv: + type: string + default: "test-environment-36" + steps: + - run: + name: Install libGL + command: | + apt-get --yes update + apt-get --yes install libglu1-mesa + apt-get --yes install libgl1-mesa-glx + apt-get --yes install libxrender1 + - checkout - run: name: fetch tags command: git fetch origin --tags - - restore_conda_cache + - restore_conda_cache: + condaenv: << parameters.condaenv >> - attach_workspace: at: ~/project @@ -430,7 +533,7 @@ jobs: - run: name: build and test tarball command: | - source activate ~/project/test-environment-36 + source activate ~/project/<< parameters.condaenv >> python setup.py bdist_egg python setup.py release --unix FIPY_VERSION=`python setup.py --version` @@ -478,18 +581,30 @@ workflows: # - test-27-inline: # requires: # - conda2_env - - test-27-scipy: +# - test-27-scipy: +# requires: +# - conda2_env + - test-27-trilinos-serial: + requires: + - conda2_env + - test-27-trilinos-parallel: requires: - conda2_env - - test-27-trilinos: + - test-27-petsc-serial: requires: - conda2_env - - test-27-parallel: + - test-27-petsc-parallel: requires: - conda2_env - test-36-scipy: requires: - conda3_env + - test-36-petsc-serial: + requires: + - conda3_env + - test-36-petsc-parallel: + requires: + - conda3_env - build-binaries: requires: - conda3_env @@ -499,7 +614,10 @@ workflows: - black - pyspelling - test-27-pysparse - - test-27-scipy - - test-27-trilinos - - test-27-parallel + - test-27-trilinos-serial + - test-27-trilinos-parallel + - test-27-petsc-serial + - test-27-petsc-parallel - test-36-scipy + - test-36-petsc-serial + - test-36-petsc-parallel diff --git a/.en-custom.txt b/.en-custom.txt index ee4182f33e..bde291a2fe 100644 --- a/.en-custom.txt +++ b/.en-custom.txt @@ -59,9 +59,12 @@ conda CondaForge conda-forge conjunctionality +cpu +cpus Crank-Nicolson Croft's crystallographically +CSR css CTCMS CVs @@ -107,6 +110,7 @@ Fick's fipy FiPy FiPy's +FIXME FV FVM Gauss-Seidel @@ -183,15 +187,17 @@ Malengier Materialia matforge matplotlib -Mazur +maxima mayavi mayavi2 +Mazur Merks mesh-element--by--mesh-element metallization micrographs Microstructology microstructure +minima MinMod misorientation MML @@ -227,6 +233,7 @@ overbar overpotential O'Beirne parallelization +parallelize Patankar PBICGSTAB PCG @@ -236,6 +243,7 @@ pdf Péclet PEG-SPS-Cl Peric +PETSc photovoltaics PID PNG @@ -345,6 +353,7 @@ YZ Zhitenev 1D 2D +2x4 2.x 3D 3x2x1 diff --git a/.travis.yml b/.travis.yml index ec01b49b19..630cf50c4a 100644 --- a/.travis.yml +++ b/.travis.yml @@ -8,10 +8,14 @@ os: env: - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=pysparse # - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=pysparse FIPY_INLINE=1 - - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=scipy +# - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=scipy - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=trilinos - TRAVIS_PYTHON_VERSION=2.7 MPIRUN="mpirun -np 2" FIPY_SOLVERS=trilinos + - TRAVIS_PYTHON_VERSION=2.7 MPIRUN= FIPY_SOLVERS=petsc + - TRAVIS_PYTHON_VERSION=2.7 MPIRUN="mpirun -np 2" FIPY_SOLVERS=petsc - TRAVIS_PYTHON_VERSION=3.6 MPIRUN= FIPY_SOLVERS=scipy + - TRAVIS_PYTHON_VERSION=3.6 MPIRUN= FIPY_SOLVERS=petsc + - TRAVIS_PYTHON_VERSION=3.6 MPIRUN="mpirun -np 2" FIPY_SOLVERS=petsc cache: apt branches: except: @@ -43,9 +47,9 @@ before_install: - conda update -q conda - conda create --quiet --name test-environment --show-channel-urls --channel conda-forge python=$TRAVIS_PYTHON_VERSION fipy "gmsh<4.0"; - source activate test-environment + - conda remove --quiet --channel conda-forge --force fipy # Useful for debugging any issues with conda - conda info -a - - pip install future - pip install scikit-fmm install: - python setup.py install diff --git a/CHANGELOG.rst b/CHANGELOG.rst index c3a4193832..18283aa67e 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -11,6 +11,10 @@ Change Log Version |release| ----------------- +----------- +Version 3.3 +----------- + This release brings support for Python 2 and Python 3 from the same source, without any translation. Thanks to `@pya `_ and `@woodscn `_ for getting things started. @@ -574,7 +578,7 @@ The significant changes since version 2.1 are: - Most :class:`~fipy.meshes.mesh.Mesh`\es can be partitioned by :ref:`MeshingWithGmsh`. - :ref:`PYAMG` and :ref:`SCIPY` have been added to the :ref:`SOLVERS`. -- FiPy is capable of :ref:`RunningUnderPython3`. +- FiPy is capable of running under :term:`Python 3`. - "getter" and "setter" methods have been pervasively changed to Python properties. - The test suite now runs much faster. diff --git a/INSTALLATION.rst b/INSTALLATION.rst index 4d1cca793c..d097df748e 100644 --- a/INSTALLATION.rst +++ b/INSTALLATION.rst @@ -223,8 +223,7 @@ If necessary, you can download_ and install it for your platform .. note:: - :term:`FiPy` requires at least version 2.7.x of :term:`Python`. See - the specialized instructions if you plan on :ref:`RunningUnderPython3`. + :term:`FiPy` requires at least version 2.7.x of :term:`Python`. .. _download: http://www.python.org/download/ diff --git a/binder/environment.yml b/binder/environment.yml index e35c388cd8..e5ec4411b1 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -3,15 +3,13 @@ channels: - conda-forge - defaults dependencies: - - python =2.7 + - python >=3.6 - numpy - scipy - - gmsh <4.0 - - pysparse - - pytrilinos + - gmsh - mpi4py + - petsc4py - matplotlib - mayavi - - weave - pip: - "--editable=../" diff --git a/documentation/SOLVERS.rst b/documentation/SOLVERS.rst index 7cbec08041..b72deb0f0c 100644 --- a/documentation/SOLVERS.rst +++ b/documentation/SOLVERS.rst @@ -47,6 +47,29 @@ solver suite for generic solvers is :ref:`PYSPARSE` followed by .. _Python 3.x: http://docs.python.org/py3k/ +.. _PETSC: + +----- +PETSc +----- + +https://www.mcs.anl.gov/petsc + +:term:`PETSc` (the Portable, Extensible Toolkit for Scientific Computation) +is a suite of data structures and routines for the scalable (parallel) +solution of scientific applications modeled by partial differential +equations. It employs the :term:`MPI` standard for all message-passing +communication (see :ref:`PARALLEL` for more details). + +.. attention:: :term:`PETSc` requires the :term:`petsc4py` and :term:`mpi4py` + interfaces. + +.. note:: :term:`FiPy` does not implement any precoditioner objects for + :term:`PETSc`. Simply pass one of the `PCType strings`_ in the + `precon=` argument when declaring the solver. + +.. _PCType strings: https://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/PC/PCType.html + .. _PYSPARSE: -------- @@ -132,54 +155,39 @@ solutions to some difficult problems that :term:`Pysparse` and for most problems, and is **not** recommended for a basic install of :term:`FiPy`. -:term:`Trilinos` requires `cmake `_, :term:`NumPy`, -and `swig `_. The following are the minimal steps to -build and install :term:`Trilinos` (with :term:`PyTrilinos`) for -:term:`FiPy`:: - - $ cd trilinos-X.Y/ - $ SOURCE_DIR=`pwd` - $ mkdir BUILD_DIR - $ cd BUILD_DIR - $ cmake \ - > -D CMAKE_BUILD_TYPE:STRING=RELEASE \ - > -D Trilinos_ENABLE_PyTrilinos:BOOL=ON \ - > -D BUILD_SHARED_LIBS:BOOL=ON \ - > -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=ON \ - > -D TPL_ENABLE_MPI:BOOL=ON \ - > -D Trilinos_ENABLE_TESTS:BOOL=ON \ - > -D DART_TESTING_TIMEOUT:STRING=600 \ - > ${SOURCE_DIR} - $ make - $ make install - -Depending on your platform, other options may be helpful or necessary; -see the :term:`Trilinos` user guide available from -http://trilinos.sandia.gov/documentation.html, or -http://trilinos.sandia.gov/packages/pytrilinos/faq.html for more -in-depth documentation. - -.. note:: +.. attention:: - Trilinos can be installed in a non-standard location by adding the - :samp:`-D CMAKE_INSTALL_PREFIX:PATH=${{INSTALL_DIR}}` and - :samp:`-D PyTrilinos_INSTALL_PREFIX:PATH=${{INSTALL_DIR}}` flags - to the configure step. If :term:`Trilinos` is installed in a - non-standard location, the path to the :term:`PyTrilinos` - site-packages directory should be added to the :envvar:`PYTHONPATH` - environment variable; this should be of the form - :file:`${{INSTALL_DIR}}/lib/${{PYTHON_VERSION}}/site-packages/`. Also, - the path to the :term:`Trilinos` ``lib`` directory should be added to - the :envvar:`LD_LIBRARY_PATH` (on Linux) or :envvar:`DYLD_LIBRARY_PATH` - (on Mac OS X) environment variable; this should be of the form - :file:`${{INSTALL_DIR}}/lib``. + :term:`Trilinos` *must* be compiled with :term:`MPI` support for + :ref:`PARALLEL`. -.. _MPI4PY: +.. tip:: -mpi4py -====== + :term:`Trilinos` parallel efficiency is greatly improved by also + installing :term:`Pysparse`. If :term:`Pysparse` is not installed, be + sure to use the ``--no-pysparse`` flag. -http://mpi4py.scipy.org/ +.. note:: -For :ref:`PARALLEL`, :term:`FiPy` requires ``mpi4py``, in addition to -:term:`Trilinos`. + :term:`Trilinos` solvers frequently give intermediate output that + :term:`FiPy` cannot suppress. The most commonly encountered + messages are + + ``Gen_Prolongator warning : Max eigen <= 0.0`` + which is not significant to :term:`FiPy`. + + ``Aztec status AZ_loss: loss of precision`` + which indicates that there was some difficulty in solving the + problem to the requested tolerance due to precision limitations, + but usually does not prevent the solver from finding an adequate + solution. + + ``Aztec status AZ_ill_cond: GMRES hessenberg ill-conditioned`` + which indicates that GMRES is having trouble with the problem, and + may indicate that trying a different solver or preconditioner may + give more accurate results if GMRES fails. + + ``Aztec status AZ_breakdown: numerical breakdown`` + which usually indicates serious problems solving the equation which + forced the solver to stop before reaching an adequate solution. + Different solvers, different preconditioners, or a less restrictive + tolerance may help. diff --git a/documentation/USAGE.rst b/documentation/USAGE.rst index 0e4b95be20..d131a89ca1 100644 --- a/documentation/USAGE.rst +++ b/documentation/USAGE.rst @@ -248,7 +248,7 @@ package. Solving in Parallel ------------------- -:term:`FiPy` can use :term:`Trilinos` to solve equations in +:term:`FiPy` can use :ref:`PETSC` or :ref:`TRILINOS` to solve equations in parallel. Most mesh classes in :mod:`fipy.meshes` can solve in parallel. This includes all "``...Grid...``" and "``...Gmsh...``" class meshes. Currently, the only remaining serial-only meshes are @@ -257,40 +257,85 @@ class meshes. Currently, the only remaining serial-only meshes are .. attention:: - :term:`Trilinos` *must* be compiled with MPI_ support. - -.. attention:: - - :term:`FiPy` requires :ref:`MPI4PY` to work in parallel. See the - :ref:`MPI4PY` installation guide. + :term:`FiPy` requires :term:`mpi4py` to work in parallel. .. tip:: - You are strongly advised to force the use of only one OpenMP_ thread:: + You are strongly advised to force the use of only one :term:`OpenMP` + thread with :ref:`Trilinos`:: $ export OMP_NUM_THREADS=1 See :ref:`THREADS_VS_RANKS` for more information. -.. tip:: +.. note:: - Parallel efficiency is greatly improved by installing - :term:`Pysparse` in addition to :term:`Trilinos`. If - :term:`Pysparse` is not installed be sure to use the - ``--no-pysparse`` flag when running in parallel. + `Trilinos 12.12 has support for Python 3`_, but + `PyTrilinos on conda-forge`_ presently only provides 12.10, which is + limited to Python 2.x. :ref:`PETSC` is available for both :term:`Python + 3` and :term:`Python` 2.7. It should not generally be necessary to change anything in your script. Simply invoke:: + $ mpirun -np {# of processors} python myScript.py --petsc + +or:: + $ mpirun -np {# of processors} python myScript.py --trilinos instead of:: $ python myScript.py -To confirm that :term:`FiPy` and :term:`Trilinos` are properly configured -to solve in parallel, the easiest way to tell is to run one of the -examples, e.g.,:: +The following plot shows the scaling behavior for multiple +processors. We compare solution time vs number of Slurm_ tasks (available +cores) for a `Method of Manufactured Solutions Allen-Cahn problem`_. + +.. plot:: documentation/pyplots/scaling.py + + Scaling behavior of different solver packages + +"Speedup" relative to :ref:`PySparse` (bigger numbers are better) versus +number of tasks (processes) on a log-log plot. The number of threads per +:term:`MPI` rank is indicated by the line style (see legend). +:term:`OpenMP` threads :math:`\times` :term:`MPI` ranks = Slurm_ tasks. + +A few things can be observed in this plot: + +- Both :ref:`PETSc` and :ref:`Trilinos` exhibit power law scaling, but the + power is only about 0.7. At least one source of this poor scaling is + that our "``...Grid...``" meshes parallelize by dividing the mesh into + slabs, which leads to more communication overhead than more compact + partitions. The "``...Gmsh...``" meshes partition more efficiently, but + carry more overhead in other ways. We'll be making efforts to improve + the partitioning of the "``...Grid...``" meshes in a future release. + +- :ref:`PETSc` and :ref:`Trilinos` have fairly comparable performance, but + lag :ref:`PySparse` by a considerable margin. The :ref:`SciPy` solvers + are even worse. Some of this discrepancy may be because the different + packages are not all doing the same thing. Different solver packages + have different default solvers and preconditioners. Moreover, the + meaning of the solution tolerance depends on the normalization the solver + uses and it is not always obvious which of several possibilities a + particular package employs. We will endeavor to normalize the + normalizations in a future release. + +- :ref:`PETSc` with one thread is faster than with two threads until the + number of tasks reaches about 10 and is faster than with four threads + until the number of tasks reaches more than 20. :ref:`Trilinos` with one + thread is faster than with two threads until the number of tasks is more + than 30. We don't fully understand the reasons for this, but there may be + a *modest* benefit, *when using a large number of cpus*, to allow two to + four :term:`OpenMP` threads per :term:`MPI` rank. See + :ref:`THREADS_VS_RANKS` for caveats and more information. + +These results are likely both problem and architecture dependent. You +should develop an understanding of the scaling behavior of your own codes +before doing "production" runs. + +The easiest way to confirm that :term:`FiPy` is properly configured to +solve in parallel is to run one of the examples, e.g.,:: $ mpirun -np 2 examples/diffusion/mesh1D.py @@ -303,29 +348,31 @@ sure, you can run a diagnostic script:: which should print out:: - mpi4py: processor 0 of 3 :: PyTrilinos: processor 0 of 3 :: FiPy: 5 cells on processor 0 of 3 - mpi4py: processor 1 of 3 :: PyTrilinos: processor 1 of 3 :: FiPy: 7 cells on processor 1 of 3 - mpi4py: processor 2 of 3 :: PyTrilinos: processor 2 of 3 :: FiPy: 6 cells on processor 2 of 3 + mpi4py PyTrilinos petsc4py FiPy + processor 0 of 3 :: processor 0 of 3 :: processor 0 of 3 :: 5 cells on processor 0 of 3 + processor 1 of 3 :: processor 1 of 3 :: processor 1 of 3 :: 7 cells on processor 1 of 3 + processor 2 of 3 :: processor 2 of 3 :: processor 2 of 3 :: 6 cells on processor 2 of 3 If there is a problem with your parallel environment, it should be clear that there is either a problem importing one of the required packages or -that there is some problem with the MPI environment. For example:: +that there is some problem with the :term:`MPI` environment. For example:: - mpi4py: processor 2 of 3 :: PyTrilinos: processor 0 of 1 :: FiPy: 10 cells on processor 0 of 1 + mpi4py PyTrilinos petsc4py FiPy + processor 0 of 3 :: processor 0 of 3 :: processor 0 of 3 :: 10 cells on processor 0 of 1 [my.machine.com:69815] WARNING: There were 4 Windows created but not freed. - mpi4py: processor 1 of 3 :: PyTrilinos: processor 0 of 1 :: FiPy: 10 cells on processor 0 of 1 + processor 1 of 3 :: processor 1 of 3 :: processor 1 of 3 :: 10 cells on processor 0 of 1 [my.machine.com:69814] WARNING: There were 4 Windows created but not freed. - mpi4py: processor 0 of 3 :: PyTrilinos: processor 0 of 1 :: FiPy: 10 cells on processor 0 of 1 + processor 2 of 3 :: processor 2 of 3 :: processor 2 of 3 :: 10 cells on processor 0 of 1 [my.machine.com:69813] WARNING: There were 4 Windows created but not freed. -indicates :ref:`MPI4PY` is properly communicating with MPI and is running +indicates :term:`mpi4py` is properly communicating with :term:`MPI` and is running in parallel, but that :ref:`TRILINOS` is not, and is running three separate serial environments. As a result, :term:`FiPy` is limited to three separate serial operations, too. In this instance, the problem is that although -:ref:`TRILINOS` was compiled with MPI enabled, it was compiled against a -different MPI library than is currently available (and which :ref:`MPI4PY` +:ref:`TRILINOS` was compiled with :term:`MPI` enabled, it was compiled against a +different :term:`MPI` library than is currently available (and which :term:`mpi4py` was compiled against). The solution is to rebuild :ref:`TRILINOS` against -the active MPI libraries. +the active :term:`MPI` libraries. When solving in parallel, :term:`FiPy` essentially breaks the problem up into separate sub-domains and solves them (somewhat) independently. @@ -333,47 +380,30 @@ up into separate sub-domains and solves them (somewhat) independently. you need to do something with the entire solution, you can use ``var.``:attr:`~fipy.variables.cellVariable.CellVariable.globalValue`. -.. note:: - - :term:`Trilinos` solvers frequently give intermediate output that - :term:`FiPy` cannot suppress. The most commonly encountered - messages are - - ``Gen_Prolongator warning : Max eigen <= 0.0`` - which is not significant to :term:`FiPy`. - - ``Aztec status AZ_loss: loss of precision`` - which indicates that there was some difficulty in solving the - problem to the requested tolerance due to precision limitations, - but usually does not prevent the solver from finding an adequate - solution. +.. note:: One option for debugging in parallel is:: - ``Aztec status AZ_ill_cond: GMRES hessenberg ill-conditioned`` - which indicates that GMRES is having trouble with the problem, and - may indicate that trying a different solver or preconditioner may - give more accurate results if GMRES fails. + $ mpirun -np {# of processors} xterm -hold -e "python -m ipdb myScript.py" - ``Aztec status AZ_breakdown: numerical breakdown`` - which usually indicates serious problems solving the equation which - forced the solver to stop before reaching an adequate solution. - Different solvers, different preconditioners, or a less restrictive - tolerance may help. +.. _Trilinos 12.12 has support for Python 3 : https://github.com/trilinos/Trilinos/issues/3203 +.. _PyTrilinos on conda-forge: https://anaconda.org/conda-forge/pytrilinos +.. _Slurm: https://slurm.schedmd.com .. _THREADS_VS_RANKS: OpenMP Threads vs. MPI Ranks ============================ -By default, Trilinos spawns as many OpenMP_ threads as there are cores +By default, :ref:`PETSc` and :ref:`Trilinos` spawn as many :term:`OpenMP` threads +as there are cores available. This may very well be an intentional optimization, where -Trilinos is designed to have one MPI_ rank per node of a cluster, so each +they are designed to have one :term:`MPI` rank per node of a cluster, so each of the child threads would help with computation but would not compete for I/O resources during ghost cell exchanges and file I/O. However, Python's `Global Interpreter Lock`_ (GIL) binds all of the child threads to the same core as their parent! So instead of improving performance, each core -suffers a heavy overhead from the managing those idling threads. +suffers a heavy overhead from managing those idling threads. -The solution to this is to force Trilinos to use only one OpenMP_ thread:: +The solution to this is to force these solvers to use only one :term:`OpenMP` thread:: $ export OMP_NUM_THREADS=1 @@ -384,30 +414,33 @@ current session, you may prefer to restrict its use to :term:`FiPy` runs:: The difference can be extreme. We have observed the :term:`FiPy` test suite to run in `just over two minutes`_ when ``OMP_NUM_THREADS=1``, -compared to `over an hour and 23 minutes`_ when OpenMP_ threads are +compared to `over an hour and 23 minutes`_ when :term:`OpenMP` threads are unrestricted. We don't know why, but `other platforms`_ do not suffer the same degree of degradation. -Conceivably, allowing Trilinos unfettered access to OpenMP_ threads with no -MPI_ communication at all could perform as well or better than purely MPI_ +Conceivably, allowing these parallel solvers unfettered access to +:term:`OpenMP` threads with no :term:`MPI` communication at all could perform +as well or better than purely :term:`MPI` parallelization. The plot below demonstrates this is not the case. We -compare solution time vs number of OpenMP_ threads for fixed number of +compare solution time vs number of :term:`OpenMP` threads for fixed number of slots for a `Method of Manufactured Solutions Allen-Cahn problem`_. -OpenMP_ threading always slows down FiPy performance. +:term:`OpenMP` threading always slows down FiPy performance. -.. plot:: documentation/pyplots/threadanalyze.py +.. plot:: documentation/pyplots/cpus_vs_threads.py - OpenMP_ threads :math:`\times` MPI_ cpus = slots. + Effect of having more :term:`OpenMP` threads for each :term:`MPI` rank + +"Speedup" relative to one thread (bigger numbers are better) versus number +of threads for 32 Slurm_ tasks on a log-log plot. :term:`OpenMP` threads +:math:`\times` :term:`MPI` ranks = Slurm_ tasks. See https://www.mail-archive.com/fipy@nist.gov/msg03393.html for further analysis. -It may be possible to configure PyTrilinos to use only one OpenMP_ thread, +It may be possible to configure these packages to use only one :term:`OpenMP` thread, but this is not the configuration of the version available from conda-forge_ -and building Trilinos is |NotFun (TM)|_. +and building Trilinos, at least, is |NotFun (TM)|_. -.. _OpenMP: https://www.openmp.org -.. _MPI: http://www.mpi-forum.org .. _Global Interpreter Lock: https://docs.python.org/2.7/c-api/init.html#thread-state-and-the-global-interpreter-lock .. _just over two minutes: https://circleci.com/gh/guyer/fipy/461 .. _over an hour and 23 minutes: https://circleci.com/gh/guyer/fipy/423 @@ -895,37 +928,36 @@ Nothing different needs to be done when % \subsection{Internal boundary conditions} -.. _RunningUnderPython3: +.. _RunningUnderPython2: ---------------------- -Running under Python 3 +Running under Python 2 ---------------------- Thanks to the future_ package and to the contributions of pya_ and woodscn_, :term:`FiPy` runs under both :term:`Python 3` and :term:`Python` -2.7, without conversion or modification. Because the only supported solver -under :term:`Python 3` is :term:`SciPy`, which is not very fast, there is -admittedly little advantage in doing so at this time. We still use -:term:`FiPy` under :term:`Python` 2.x for our own work. +2.7, without conversion or modification. Because :term:`Python` itself will `drop support for Python 2.7 on January 1, 2020`_ and many of the prerequisites for :term:`FiPy` have `pledged to -drop support for Python 2.7 no later than 2020`_, we will prioritize adding -support for better :term:`Python 3` solvers, probably starting with -petsc4py_. - -The minimal prerequisites are: - - * :term:`NumPy` - * :term:`SciPy` - * :term:`Matplotlib` +drop support for Python 2.7 no later than 2020`_, we have prioritized adding +support for better :term:`Python 3` solvers, starting with +:term:`petsc4py`. + +Because the faster :term:`PySparse` and :term:`Trilinos` solvers are not +available under :term:`Python 3`, we will maintain :term:`Python` 2.x +support as long as practical. Be aware that the conda-forge_ packages that +:term:`FiPy` depends upon are not well-maintained on :term:`Python` 2.x +and our support for that configuration is rapidly becoming impractical, +despite the present performance benefits. Hopefully, we will learn +how to optimize our use of :ref:`PETSc` and/or :ref:`Trilinos` 12.12 will +become available on conda-forge_. .. _future: http://python-future.org .. _pya: https://github.com/pya .. _woodscn: https://github.com/pya .. _drop support for Python 2.7 on January 1, 2020: https://www.python.org/dev/peps/pep-0373/#update .. _pledged to drop support for Python 2.7 no later than 2020: https://python3statement.org -.. _petsc4py: https://petsc4py.readthedocs.io ------ Manual diff --git a/documentation/glossary.rst b/documentation/glossary.rst index 058519a473..b9abaee4d6 100644 --- a/documentation/glossary.rst +++ b/documentation/glossary.rst @@ -74,6 +74,19 @@ Glossary MayaVi The predecessor to :term:`Mayavi`. Yes, it's confusing. + MPI + The Message Passing Interface is a standard that allows the use of + multiple processors. See + http://www.mpi-forum.org + + mpi4py + MPI for Python provides bindings of the Message Passing Interface + (:term:`MPI`) standard for the Python programming language, allowing any + Python program to exploit multiple processors. For :ref:`PARALLEL`, + :term:`FiPy` requires :mod:`mpi4py`, in addition to :term:`PETSc` or + :term:`Trilinos`. See + https://mpi4py.readthedocs.io. + numarray An archaic predecessor to :term:`NumPy`. @@ -85,10 +98,27 @@ Glossary facilities. See http://www.scipy.org/NumPy. + OpenMP + The Open Multi-Processing architecture is a specification for a set + of compiler directives, library routines, and environment variables + that can be used to specify high-level parallelism in Fortran and + C/C++ programs. See + https://www.openmp.org. + pandas "Python Data Analysis Library" provides high-performance data structures for flexible, extensible analysis. See http://pandas.pydata.org. + PETSc + The Portable, Extensible Toolkit for Scientific Computation is a + suite of data structures and routines for the scalable (parallel) + solution of scientific applications modeled by partial differential + equations. See https://www.mcs.anl.gov/petsc and :ref:`PETSC`. + + petsc4py + :term:`Python` wrapper for :term:`PETSc`. See + https://petsc4py.readthedocs.io/. + pip "pip installs python" is a tool for installing and managing Python packages, such as those found in :term:`PyPI`. diff --git a/documentation/pyplots/cpus_vs_threads.py b/documentation/pyplots/cpus_vs_threads.py new file mode 100644 index 0000000000..786a6e761c --- /dev/null +++ b/documentation/pyplots/cpus_vs_threads.py @@ -0,0 +1,40 @@ +from __future__ import unicode_literals +from matplotlib import pyplot as plt +import matplotlib.ticker as ticker +import pandas as pd +import numpy as np + +df = pd.read_csv("threading.csv", comment='#') + +df = df[(df['totaltime'] == 8.0) & (df['nx'] == 400)] + +df = df[df['nthreads'] * df['ncpus'] == df['nslots']] + +fig, ax = plt.subplots(figsize=(10,8)) + +colors = dict(petsc='blue', trilinos='red', pysparse='orange', scipy='green') +markers = dict(petsc='x', trilinos='+', pysparse='^', scipy='v') +linestyles = {1: '-', 2: '--', 4: '-.', 16: ':'} + +for solver, group1 in df.groupby('solver'): + stats = group1.groupby('nthreads') + + av = stats.get_group(1).solvetime.mean() / stats.solvetime.mean() + st = stats.get_group(1).solvetime.mean() / stats.solvetime.std() + + ax.errorbar(av.index, av, yerr=st, + marker=markers[solver], color=colors[solver], linewidth=2, + markersize=12, label=solver) + +plt.xscale('log') +plt.yscale('log') + +for axis in [ax.xaxis, ax.yaxis]: + axis.set_major_formatter(ticker.FuncFormatter(lambda y,pos: ('{{:.{:1d}f}}'.format(int(np.maximum(-np.log10(y),0)))).format(y))) + +plt.legend(loc="upper right", frameon=False, handlelength=5) + +plt.xlabel("# threads") +plt.ylabel(r'"speedup" ($t_1 / t_N$)') + +plt.show() diff --git a/documentation/pyplots/scaling.csv b/documentation/pyplots/scaling.csv new file mode 100644 index 0000000000..a43280377f --- /dev/null +++ b/documentation/pyplots/scaling.csv @@ -0,0 +1,2743 @@ + +# Data extracted from CTCMS.nist.gov:/data/guyer/CHiMaDPhaseFieldVI +# Extracted from sumatra records that were tagged [`__finished__`, `scaling`] +# Data was generated with threadtest.{py,sh} to compare tradeoffs between +# MPI cpus and OpenMP threads using a Method of Manufactured Solutions +# Allen-Can problem based on https://pages.nist.gov/pfhub/benchmarks/benchmark7.ipynb +label,datastore,dependencies,diff,duration,executable,input_data,input_datastore,launch_mode,main_file,outcome,output_data,parameters,platforms,reason,repeats,repository,script_arguments,stdout_stderr,tags,timestamp,user,version,Lx,Ly,checkpoint,dt,input,iterations,kappa_x,ncpus,nproc,nslots,nthreads,nx,preconditioner,script,solver,sumatra_label,sweeps,tolerance,totaltime,dt_exact,eq,eta,kappa_y,numsteps,smt_project,solvetime +0632e8a6a20c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0632e8a6a20c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, 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Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0632e8a6a20c +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-16 13:04:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,scipy,0632e8a6a20c,5.0,,8.0,,,,,,benchmark7,19621.971572875977 +0af2135903a9,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0af2135903a9'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,118.0172290802002,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0af2135903a9.json', u'creation': u'2020-01-03 14:00:25', u'digest': u'd4d40e92e5625a16519d00552654dce6fdd2d613', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10443}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 14:00:21', u'digest': u'8c4193af5dc8030e508aa3d6729019e0f3cea46c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:57:56', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 14:00:22', u'digest': u'094132935bd4d62932bc6e492055a65b095e4f7f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:57:58', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 14:00:24', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0af2135903a9'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0af2135903a9 +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:57:55,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,100.0,,explicitDW7a.py,trilinos,0af2135903a9,5.0,,8.0,,,,,,benchmark7,51.35014200210571 +0b62439a2c42,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0b62439a2c42'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,6778.742866039276,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0b62439a2c42.json', u'creation': u'2020-01-14 11:41:59', u'digest': u'e2319ab2c5a007a02d0a7815bf14a7501be8c77a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6896}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 11:40:16', u'digest': u'70e6253ae3a18ee495a4ba8a025c7f2503407fb7', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317024}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 09:47:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 11:41:55', u'digest': u'037b27cd8724677d42f7f088e7aaeae4984dd1fa', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 09:47:06', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 11:41:56', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0b62439a2c42'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0b62439a2c42 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 09:47:02,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,1000.0,,explicitDW7a.py,petsc,0b62439a2c42,5.0,,8.0,,,,,,benchmark7,6572.97837305069 +0caccf93735b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0caccf93735b'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,141.35882306098938,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0caccf93735b.json', u'creation': u'2020-01-02 14:23:00', u'digest': u'f5de2a0b7a7aa7a13407f7d87e07ddaef1e288cf', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7316}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:53', u'digest': u'315d0fb1fd72b7ab76bc9e444e4abeb31f8d2e99', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:22:56', u'digest': u'c2a10027c09a3ebda3dc2971bad20aa15d0fba47', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:22:59', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0caccf93735b'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0caccf93735b +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,0caccf93735b,5.0,,8.0,,,,,,benchmark7,60.15297985076904 +0d835edcc4b4,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0d835edcc4b4'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,136.7552981376648,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0d835edcc4b4.json', u'creation': u'2020-01-08 13:30:22', u'digest': u'20924d1d4808fb09c02783be73c9feea9e655896', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6717}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 13:30:22', u'digest': u'a648533a5bdc3a8c5cfb3f317dd99255e776b76e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 13:27:43', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 13:30:22', u'digest': u'6815fa532f251279dc1d31fed01e2aa90d3a6556', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 13:27:43', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 13:30:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0d835edcc4b4'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0d835edcc4b4 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-08 13:27:43,Jonathan Guyer ,4e2f7baf12f9dde0fc0b3a5112730c2933d24993,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,0d835edcc4b4,5.0,,8.0,,,,,,benchmark7,78.7482738494873 +0f0a1c16c702,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0f0a1c16c702'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,119.40403890609741,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0f0a1c16c702.json', u'creation': u'2020-01-03 14:00:31', u'digest': u'82144c36770d9c21bdacc34401da17101f228267', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8361}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 14:00:25', u'digest': u'39c8d3b40e94d798487f47c5a052a93c08c744d5', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141111}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:57:58', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 14:00:28', u'digest': u'8f318b5016041f80a56cc682587789605b887c78', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:58:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 14:00:30', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0f0a1c16c702'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0f0a1c16c702 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:57:55,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,100.0,,explicitDW7a.py,trilinos,0f0a1c16c702,5.0,,8.0,,,,,,benchmark7,52.21851110458374 +0f17a829a4c6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0f17a829a4c6'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1580.5377810001373,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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'0f17a829a4c6'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': 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u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0f17a829a4c6 +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:11,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,1000.0,,explicitDW7a.py,trilinos,0f17a829a4c6,5.0,,8.0,,,,,,benchmark7,1451.918813943863 +101c6536e769,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/101c6536e769'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,3144.1154370307922,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.101c6536e769.json', u'creation': u'2020-01-08 22:34:57', u'digest': u'43427a7d0a3a68fd5349a9e0c05d25325bb55ec1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8538}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 22:34:46', u'digest': u'5c1e23fedb347dfe2d4b7ea02f89325f449e6828', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13319114}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 21:42:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 22:34:54', u'digest': u'a518514b20a02bcea05228be0313e3e5aad56f7b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 21:42:12', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 22:34:56', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '101c6536e769'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/101c6536e769 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 21:42:08,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,1000.0,,explicitDW7a.py,trilinos,101c6536e769,5.0,,8.0,,,,,,benchmark7,1610.8904461860657 +1225af580ad6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/1225af580ad6'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', 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u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1951.7268619537354,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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'1225af580ad6'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1225af580ad6 +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,1000.0,,explicitDW7a.py,petsc,1225af580ad6,5.0,,8.0,,,,,,benchmark7,1546.2786939144135 +14ecc45874a9,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/14ecc45874a9'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,144.12228083610535,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.14ecc45874a9.json', u'creation': u'2020-01-07 21:36:02', u'digest': u'6738f5514fb4780a22c9204b58534663316a1c93', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:35:56', u'digest': u'76ee5f5eff645d705e46fbe7b8bf4fc5e710c63e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:33:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:35:59', u'digest': u'a49489edc3b948b9cbe03f88087319e36fa50938', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:33:18', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:36:02', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '14ecc45874a9'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/14ecc45874a9 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:33:14,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,14ecc45874a9,5.0,,8.0,,,,,,benchmark7,54.89430809020996 +194c0e4f93c6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/194c0e4f93c6'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,290.49135184288025,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.194c0e4f93c6.json', u'creation': u'2020-01-02 16:16:40', u'digest': u'53dc6288d4f10b32b87d80279a5a06fc4ad092be', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 16:16:39', u'digest': u'40245d4c46436e52e439d876d637bca41f1bd71d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 16:06:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 16:16:40', u'digest': u'14e1cfce30bba2770a323062f85134eda2cd7f43', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 16:06:39', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 16:16:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '194c0e4f93c6'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/194c0e4f93c6 +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-02 16:06:34,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,194c0e4f93c6,5.0,,8.0,,,,,,benchmark7,94.2445478439331 +198d010855a0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/198d010855a0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,133.36635398864746,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.198d010855a0.json', u'creation': u'2020-01-07 22:16:49', u'digest': u'13ef08356a80e43f33919a38c414071fdf1bb312', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14603}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 22:16:48', u'digest': u'b3518803693552913b29e2a4ae2f7648e0c9e067', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:14:10', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 22:16:49', u'digest': u'97eee81221e6f3f31d6de5ff1de0e80bc9173f94', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:14:10', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 22:16:49', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '198d010855a0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP 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u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/198d010855a0 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:14:09,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,100.0,,explicitDW7a.py,trilinos,198d010855a0,5.0,,8.0,,,,,,benchmark7,52.74078893661499 +1c8b04e0de6a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/1c8b04e0de6a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,122.40307402610779,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.1c8b04e0de6a.json', u'creation': u'2020-01-03 13:54:08', u'digest': u'c5d4909ddfca7ffba78f0fecf9bc445b467df665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6800}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 13:54:03', u'digest': u'b05336231fd6e65bd4740c21b1ffb080957c0366', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141132}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:51:49', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 13:54:04', u'digest': u'45bbe929ee051d31ae2a826e66e3f0c4ce97ec70', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:51:52', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 13:54:06', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '1c8b04e0de6a'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1c8b04e0de6a +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:51:49,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,trilinos,1c8b04e0de6a,5.0,,8.0,,,,,,benchmark7,61.744558811187744 +1c967191ff6b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/1c967191ff6b'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,4643.047045946121,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.1c967191ff6b.json', u'creation': u'2020-01-07 23:58:40', u'digest': u'f8f54a0f0093449c82e8314cedaaed639ec17500', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6801}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 23:58:36', u'digest': u'da7b4698bd18347ee41575dc69e900fbc9ce63fd', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13271059}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:41:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 23:58:37', u'digest': u'bd5b1845382b57c4291a311ce89632637de1a0bd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:41:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 23:58:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '1c967191ff6b'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1c967191ff6b +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:41:04,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,1000.0,,explicitDW7a.py,trilinos,1c967191ff6b,5.0,,8.0,,,,,,benchmark7,4541.460219860077 +1d3a2246fb75,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/1d3a2246fb75'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,119.93419599533081,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.1d3a2246fb75.json', u'creation': u'2020-01-07 21:44:48', u'digest': u'e76dcebe60c749d8f3215c0c34e173cc6a8ec03d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10443}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:44:42', u'digest': u'6587d9d614d8754d3ac50012613541110af09cd4', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:42:29', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:44:46', u'digest': u'acab7ddee6c1b3441d587dc2e9e79c0b2e91073b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:42:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:44:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '1d3a2246fb75'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1d3a2246fb75 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:42:28,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,100.0,,explicitDW7a.py,trilinos,1d3a2246fb75,5.0,,8.0,,,,,,benchmark7,51.7186279296875 +229cb0c12abf,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/229cb0c12abf'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,122.48248291015625,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.229cb0c12abf.json', u'creation': u'2020-01-07 21:20:30', u'digest': u'3ac801bb3fcb6ec1caac7b811979d8932570bcf4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:20:23', u'digest': u'6e5bb087d50d04c1b5a2f79502fea2c0f0af6179', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:18:06', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:20:25', u'digest': u'e621c8ed1f16e17d252ce8b1978e4809c4c9ba9f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:18:08', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:20:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '229cb0c12abf'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/229cb0c12abf +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:18:02,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,229cb0c12abf,5.0,,8.0,,,,,,benchmark7,59.78273797035217 +22e007d052f0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/22e007d052f0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1077.695102930069,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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'22e007d052f0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/22e007d052f0 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 16:36:12,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,1000.0,,explicitDW7a.py,trilinos,22e007d052f0,5.0,,8.0,,,,,,benchmark7,803.8752419948578 +237192a8fbaa,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/237192a8fbaa'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2325.185422897339,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.237192a8fbaa.json', u'creation': u'2020-01-08 18:59:47', u'digest': u'5b075571a5462a4a46ce98ad2009bba6602eda80', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8535}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:59:43', u'digest': u'e99b5ba14e36190e83ad1ecf1e4fbd268e80a6e6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13334461}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:19:28', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:59:46', u'digest': u'6ea5b817af0814b8ca7a0b0d11a96a4d8630f646', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:19:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:59:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '237192a8fbaa'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/237192a8fbaa +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,1000.0,,explicitDW7a.py,petsc,237192a8fbaa,5.0,,8.0,,,,,,benchmark7,1996.392569065094 +25cfa7f112de,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/25cfa7f112de'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', 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u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.25cfa7f112de.json', u'creation': u'2020-01-02 15:23:44', u'digest': u'6285820096c406177f8c74b0ecda82c986cad2b3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14571}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 15:23:34', u'digest': u'473bf6e390c5d837af269173da03ed155a383840', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 15:20:36', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 15:23:40', u'digest': u'2a387a3179fd68c4492a006ad1cae8d01c6cfb2e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:20:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:23:44', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '25cfa7f112de'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/25cfa7f112de +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:20:35,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,100.0,,explicitDW7a.py,trilinos,25cfa7f112de,5.0,,8.0,,,,,,benchmark7,58.244450092315674 +2769195f0d21,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2769195f0d21'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1970.429838180542,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2769195f0d21.json', u'creation': u'2020-01-08 15:09:45', u'digest': u'515f6b983e34d2d648d375d007b4c06aa7edd12f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8538}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 15:09:36', u'digest': u'9ddf001be9099223295cd2d7bc3d6475cf448f23', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13319114}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 14:36:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 15:09:39', u'digest': u'd868bb23b98b79ed9d785eb2811f30b986f06d50', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 14:36:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 15:09:43', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '2769195f0d21'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2769195f0d21 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:31,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,1000.0,,explicitDW7a.py,trilinos,2769195f0d21,5.0,,8.0,,,,,,benchmark7,1861.2004988193512 +29e69363f08c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/29e69363f08c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1719.415817975998,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.29e69363f08c.json', u'creation': u'2020-01-13 15:18:05', u'digest': u'559edd4251683a18509b5f4c2f9434dec7030028', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10799}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 15:17:37', u'digest': u'81bac962e7aa2abc3a1384545bd723c3bd325345', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13332642}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 14:48:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 15:18:01', u'digest': u'4eabd69eae7115278db1594f14fa7b3d0cfd5e14', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 14:48:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 15:18:04', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '29e69363f08c'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/29e69363f08c +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:48:27,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,1000.0,,explicitDW7a.py,petsc,29e69363f08c,5.0,,8.0,,,,,,benchmark7,1554.8746809959412 +2fea4703cba5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2fea4703cba5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,4969.172997951508,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2fea4703cba5.json', u'creation': u'2020-01-13 16:12:06', u'digest': u'eac19dc15c9cac110097e464729661b96532483e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7156}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 16:11:57', u'digest': u'95206ba061951e16cdbc2798a15758bffeb0fd90', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 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u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2fea4703cba5 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:47:36,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,1000.0,,explicitDW7a.py,petsc,2fea4703cba5,5.0,,8.0,,,,,,benchmark7,4839.376903057098 +3491af744979,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3491af744979'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': 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u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': 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u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3491af744979 +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 13:59:15,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,1000.0,,explicitDW7a.py,trilinos,3491af744979,5.0,,8.0,,,,,,benchmark7,1210.7528970241547 +3861c7616be5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3861c7616be5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,7032.360877037048,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.3861c7616be5.json', u'creation': u'2020-01-14 00:20:53', u'digest': u'344ed0242c0eeaba1120e6bf53dcc224e484ceb4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6896}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 00:20:26', u'digest': u'e85331175c385473ab3bcb424687b689095d8c22', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317868}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 22:22:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 00:20:51', u'digest': u'60610cd2ae04e6140af87b66b63b039373ec7800', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 22:22:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 00:20:52', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '3861c7616be5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3861c7616be5 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 22:22:43,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,4.0,4.0,1000.0,,explicitDW7a.py,petsc,3861c7616be5,5.0,,8.0,,,,,,benchmark7,6911.733029127121 +3a5b93f6b025,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3a5b93f6b025'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': 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u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3a5b93f6b025 +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,1000.0,,explicitDW7a.py,petsc,3a5b93f6b025,5.0,,8.0,,,,,,benchmark7,1358.334625005722 +3e8fb823e443,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3e8fb823e443'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1091.0411338806152,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.3e8fb823e443.json', u'creation': u'2020-01-13 22:21:35', u'digest': u'd9afa118e77ee6109d9a1dd71b4d25df19bb4585', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8717}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 22:21:30', u'digest': u'00609093714eab72c32b63fbdd5432cbe83cc81d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13335974}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 22:02:40', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 22:21:33', u'digest': u'fa109356f8e40074cadd459f4f5e55df74f99f19', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 22:02:43', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 22:21:34', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '3e8fb823e443'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3e8fb823e443 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 22:02:36,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,1000.0,,explicitDW7a.py,petsc,3e8fb823e443,5.0,,8.0,,,,,,benchmark7,1009.1863689422607 +3f4357f743d4,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3f4357f743d4'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,7583.956342935562,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.3f4357f743d4.json', u'creation': u'2020-01-13 16:54:57', u'digest': u'296861be00c0df87755837cba97eabf6ed992846', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6896}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 16:54:52', u'digest': u'4516c53a43fbfb3dd2834b4d4ee9908e6cb25b87', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317813}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 14:47:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 16:54:54', u'digest': u'4dabd4b789399dad66b2c86faed9150905d0ddf0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 14:47:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 16:54:56', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '3f4357f743d4'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3f4357f743d4 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:47:30,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,petsc,3f4357f743d4,5.0,,8.0,,,,,,benchmark7,7419.662806987762 +4531b954f6fe,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4531b954f6fe'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2345.313320875168,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4531b954f6fe.json', u'creation': u'2020-01-14 10:28:06', u'digest': u'53634e33c7d0e04960d371420bf701b0f1f5df2f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7676}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 10:28:02', u'digest': u'c2a1ba54501f9927502f0b7a69c9fd3b3550275e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13316618}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 09:47:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 10:28:04', u'digest': u'ca14c1579aba69051b25aafa7c9ae32fafcf3136', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 09:47:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 10:28:05', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4531b954f6fe'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4531b954f6fe +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 09:47:02,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,1000.0,,explicitDW7a.py,petsc,4531b954f6fe,5.0,,8.0,,,,,,benchmark7,2227.0245921611786 +469b5dfa95fa,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/469b5dfa95fa'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,208.25905394554138,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.469b5dfa95fa.json', u'creation': u'2020-01-03 13:55:27', u'digest': u'c96f584783bf14b96c1a5410910f1ac9933718db', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6540}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 13:54:33', u'digest': u'9e8a75f43796089538e4db0543dc0a88185ad41c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:51:43', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 13:55:09', u'digest': u'4c2f16ef283e336b4b73359539d1a378af728263', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:51:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 13:55:26', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '469b5dfa95fa'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/469b5dfa95fa +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:51:43,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,469b5dfa95fa,5.0,,8.0,,,,,,benchmark7,80.82880187034607 +46baa22008d7,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/46baa22008d7'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,144.04868578910828,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.46baa22008d7.json', u'creation': u'2020-01-02 14:23:04', u'digest': u'4dbf583427b9de2caa898d1ec83439489d4572f6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6539}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:59', u'digest': u'87e0955004d9924b58e5cc4d6138e88decd1d187', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:23:01', u'digest': u'a3822a764776418c4fc8d5588f7754b0bc9f9524', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:23:03', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '46baa22008d7'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/46baa22008d7 +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,46baa22008d7,5.0,,8.0,,,,,,benchmark7,77.80644011497498 +475e265c9d94,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/475e265c9d94'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,3366.2312631607056,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.475e265c9d94.json', u'creation': u'2020-01-08 19:16:50', u'digest': u'7bead5fb088d7be1bf94bd787a216a8ec053105e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7495}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:16:46', u'digest': u'a202d3c5aac8143f91e5731060cdb0081f25578c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13318791}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:19:14', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:16:47', u'digest': u'aa75573dc5f5f77337115b75777eb79e4d9ed1a4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:19:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:16:48', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '475e265c9d94'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/475e265c9d94 +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,1000.0,,explicitDW7a.py,petsc,475e265c9d94,5.0,,8.0,,,,,,benchmark7,2919.4857239723206 +47c93a82250a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/47c93a82250a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', 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4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/49385e1651c2 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:05:10,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,1000.0,,explicitDW7a.py,trilinos,49385e1651c2,5.0,,8.0,,,,,,benchmark7,979.0107519626617 +4d05771aaeb5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4d05771aaeb5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,261.7480049133301,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4d05771aaeb5.json', u'creation': u'2020-01-07 21:37:51', u'digest': u'b17c7b4fce0f0c37646b6ab490c34dadd3ea7ed5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6800}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:36:49', u'digest': u'1270dd0a40475d6b238c945d46f79ba20a16f792', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141132}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:33:05', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:37:20', u'digest': u'21797ea88e67d78a7743fdaea9e68e1a1c0305ee', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:33:07', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:37:49', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4d05771aaeb5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4d05771aaeb5 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:33:03,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,trilinos,4d05771aaeb5,5.0,,8.0,,,,,,benchmark7,62.61760997772217 +5062a22edcad,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5062a22edcad'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', 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(2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5062a22edcad +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:24:43,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,100.0,,explicitDW7a.py,trilinos,5062a22edcad,5.0,,8.0,,,,,,benchmark7,57.052051067352295 +53d3c8573bfb,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/53d3c8573bfb'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,133.84978413581848,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.53d3c8573bfb.json', u'creation': u'2020-01-03 11:08:30', u'digest': u'a1d12813bfaf48baa6a6fb08985edf19fdc048b7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6792}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 11:08:06', u'digest': u'996a4a78129d1eda6b0745cf02da225e27da1d9f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 11:06:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 11:08:27', u'digest': u'4ff81623fe6e9104219eb1e9909965503b84cfe6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 11:06:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 11:08:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '53d3c8573bfb'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/53d3c8573bfb +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 11:06:11,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,53d3c8573bfb,5.0,,8.0,,,,,,benchmark7,88.27434492111206 +5446b3f75199,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5446b3f75199'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5446b3f75199 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r041', u'scaling']",2020-01-03 14:02:16,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,100.0,,explicitDW7a.py,trilinos,5446b3f75199,5.0,,8.0,,,,,,benchmark7,116.22506904602051 +58fd3f64ccf8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/58fd3f64ccf8'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,4949.391638040543,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.58fd3f64ccf8.json', u'creation': u'2020-01-08 19:43:31', u'digest': u'86585478eee85a916477fc24ba713b7eff13815e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6975}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:42:52', u'digest': u'b8b978af509b1678de3ed2d0bf0aeb569288dc41', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13319470}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:19:29', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:43:01', u'digest': u'275c6ce3ed354d782e8b55ca3570573d44f9d10e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:19:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:43:24', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '58fd3f64ccf8'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/58fd3f64ccf8 +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,1000.0,,explicitDW7a.py,petsc,58fd3f64ccf8,5.0,,8.0,,,,,,benchmark7,4564.994960069656 +5ab3f00ce4ba,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5ab3f00ce4ba'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1574.9579710960388,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5ab3f00ce4ba.json', u'creation': u'2020-01-08 15:02:47', u'digest': u'b6c7c067d30370c64094aa9eda6bdbe76aab415d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10621}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 15:02:40', u'digest': u'7937f76edced09629690dc2b2139650c603074be', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13323148}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 14:36:18', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 15:02:42', u'digest': u'7cc9b08d58bf4c3a179294e56396b1132f808f4e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 14:36:20', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 15:02:46', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5ab3f00ce4ba'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5ab3f00ce4ba +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:17,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,1000.0,,explicitDW7a.py,trilinos,5ab3f00ce4ba,5.0,,8.0,,,,,,benchmark7,1451.4276859760284 +5ca291421e8f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5ca291421e8f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5ca291421e8f +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 09:47:02,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,1000.0,,explicitDW7a.py,petsc,5ca291421e8f,5.0,,8.0,,,,,,benchmark7,3986.5439760684967 +5fa880c63958,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5fa880c63958'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', 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u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 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u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': 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u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5fa880c63958 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 17:00:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,1000.0,,explicitDW7a.py,petsc,5fa880c63958,5.0,,8.0,,,,,,benchmark7,1285.100587129593 +5fc3edeb9652,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5fc3edeb9652'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,5329.523869037628,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5fc3edeb9652.json', u'creation': u'2020-01-08 23:15:59', u'digest': u'50a1970fe5d9b4ddbae754bf56ead1aa4a9759fd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6978}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 23:15:33', u'digest': u'1e7dcc97b377a24f2b46c68134b40df9407e37fc', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13271348}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 21:42:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 23:15:58', u'digest': u'fa1654a37ffb73258a973b52f93441a02e66c47d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 21:42:19', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 23:15:59', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5fc3edeb9652'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5fc3edeb9652 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 21:42:15,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,1000.0,,explicitDW7a.py,trilinos,5fc3edeb9652,5.0,,8.0,,,,,,benchmark7,4101.6055381298065 +601ffbd19c0d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/601ffbd19c0d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,130.8851158618927,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.601ffbd19c0d.json', u'creation': u'2020-01-02 14:22:51', u'digest': u'ce24c12d7cb1af88ac448d969f1545b172e1939e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14571}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:45', u'digest': u'669de555fe6255334d32f0b217ef7e472c2c6913', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:22:48', u'digest': u'27d52484726077afc3cfafa519d060c70b5ce654', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:22:50', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '601ffbd19c0d'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/601ffbd19c0d +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,100.0,,explicitDW7a.py,trilinos,601ffbd19c0d,5.0,,8.0,,,,,,benchmark7,57.85895395278931 +610f77f74801,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/610f77f74801'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1299.6603329181671,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.610f77f74801.json', u'creation': u'2020-01-14 16:13:20', u'digest': u'96010f73f78aca2c34b10b85609ec7dbbe609a08', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14959}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 16:13:19', u'digest': u'f71f0285448ab3e233d643edeaad230d1e391b77', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13335336}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 15:46:19', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 16:13:20', u'digest': u'0a364126f40f17c42e1b0150c19a95a31b6a6e67', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 15:46:21', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 16:13:20', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '610f77f74801'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/610f77f74801 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 15:46:19,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,1000.0,,explicitDW7a.py,petsc,610f77f74801,5.0,,8.0,,,,,,benchmark7,779.4439301490784 +635689eba994,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/635689eba994'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2491.170346021652,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.635689eba994.json', u'creation': u'2020-01-08 22:24:03', u'digest': u'6a18e528ecf78256407eeae0d093feb7b2cd0173', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14781}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 22:23:26', u'digest': u'fcc0a09a0490924b3608841083b283323baaf66e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13324511}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 21:42:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 22:23:51', u'digest': u'd2fa566beaefedd7f64ae8b01b0158a102ec6067', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 21:42:12', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 22:24:01', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '635689eba994'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/635689eba994 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 21:42:08,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,1000.0,,explicitDW7a.py,trilinos,635689eba994,5.0,,8.0,,,,,,benchmark7,958.3082761764526 +69639ae356e3,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/69639ae356e3'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,117.62093091011047,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.69639ae356e3.json', u'creation': u'2020-01-03 14:00:04', u'digest': u'855a48c0e13cb4c36688cb9b484bcb7ed5bec9fb', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 14:00:01', u'digest': u'138046ff7d1ad350d6160763b03ef8c826dc5e06', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:54:08', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 14:00:02', u'digest': u'750ceefd38f6a8e14e6ee6a6dc510cb0fb38ccf2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:54:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 14:00:04', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '69639ae356e3'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/69639ae356e3 +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:54:07,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,69639ae356e3,5.0,,8.0,,,,,,benchmark7,58.01080799102783 +6abbbfc6cf43,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/6abbbfc6cf43'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', 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u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/6abbbfc6cf43 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:26:47,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,1000.0,,explicitDW7a.py,trilinos,6abbbfc6cf43,5.0,,8.0,,,,,,benchmark7,653.3137581348419 +6de542446317,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/6de542446317'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2579.5463650226593,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.6de542446317.json', u'creation': u'2020-01-08 22:25:22', u'digest': u'c7f8541c22b8950ee0e7d6e76db134356158de88', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10621}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 22:25:06', u'digest': u'32123f7fec1ae4eba9716a4c7da7dc5876bd15e5', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13323148}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 21:42:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 22:25:21', u'digest': u'b6b724220e693956256f9be8e7f69ed660f691a5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 21:42:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 22:25:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '6de542446317'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/6de542446317 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 21:42:08,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,1000.0,,explicitDW7a.py,trilinos,6de542446317,5.0,,8.0,,,,,,benchmark7,1088.3945531845093 +7b1051d06d7c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7b1051d06d7c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,174.68668222427368,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.7b1051d06d7c.json', u'creation': u'2020-01-07 21:21:23', u'digest': u'837b6c7e92d79e77b83972fdc987e85839f2bd71', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10443}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:21:18', u'digest': u'5609aff83faf83bbc40e5731ee666ff21f0c5573', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:18:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:21:19', u'digest': u'ff821fa745a0bc06cf70b2894fce97b6812f5338', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:18:05', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:21:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '7b1051d06d7c'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/7b1051d06d7c +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:17:39,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,100.0,,explicitDW7a.py,trilinos,7b1051d06d7c,5.0,,8.0,,,,,,benchmark7,50.44903087615967 +7c3b0a3d2b0b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7c3b0a3d2b0b'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1847.5186851024628,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.7c3b0a3d2b0b.json', u'creation': u'2020-01-07 23:11:35', u'digest': u'f29c4178cc5c46527c6f4dbfd86e4c036370288e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8362}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 23:11:30', u'digest': u'562a81e7467395bac0e17c93116fbb70b9c5dac0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13319491}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:40:39', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 23:11:30', u'digest': u'f8dc4ea1899bcd6d72f8fdeb12ab3a0d227fdec5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:40:39', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 23:11:33', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '7c3b0a3d2b0b'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/7c3b0a3d2b0b +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:40:38,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,1000.0,,explicitDW7a.py,trilinos,7c3b0a3d2b0b,5.0,,8.0,,,,,,benchmark7,1763.3594288825989 +7cadb5d68465,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7cadb5d68465'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,224.66810202598572,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.7cadb5d68465.json', u'creation': u'2020-01-07 21:40:01', u'digest': u'19a0a0d2f6912098abb03e29a4f441a6b28c6902', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6540}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:32:50', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:39:58', u'digest': u'f3b10cfb80c02040377731405349ff19e0f136dd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 29}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:32:54', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': 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u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:32:48,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,7cadb5d68465,5.0,,8.0,,,,,,benchmark7, +812eff7cc2dd,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/812eff7cc2dd'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': 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None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:17:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:19:52', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '812eff7cc2dd'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/812eff7cc2dd +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:17:41,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,812eff7cc2dd,5.0,,8.0,,,,,,benchmark7,43.92716097831726 +840430c12f77,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/840430c12f77'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,171.1409649848938,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.840430c12f77.json', u'creation': u'2020-01-02 15:23:42', u'digest': u'7c9bb9869fcbb2b60a6613a492fef8901c67b378', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8352}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 15:23:16', u'digest': u'98a80fb4eb26b0e9604ef09e53d4e19aecb784b3', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 15:20:25', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 15:23:35', u'digest': u'415d2201f804f4cd6e2c908eb19b17a61c274ddd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:20:27', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:23:42', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '840430c12f77'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/840430c12f77 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:20:23,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,100.0,,explicitDW7a.py,trilinos,840430c12f77,5.0,,8.0,,,,,,benchmark7,58.85739803314209 +8586edffc6ea,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8586edffc6ea'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,112.5375349521637,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8586edffc6ea.json', u'creation': u'2020-01-07 21:40:57', u'digest': u'6e42e2f5d22921d9d559ca5ba5e9764170cb4ed1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8361}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:40:51', u'digest': u'3948e2f1c5d3641e81405a1c1dff58aa52982072', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141111}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:38:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:40:52', u'digest': u'dff3cb92fbef27d8e5a951abb380e5b460f6ab0a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:38:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:40:55', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8586edffc6ea'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8586edffc6ea +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:38:46,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,100.0,,explicitDW7a.py,trilinos,8586edffc6ea,5.0,,8.0,,,,,,benchmark7,49.226633071899414 +8afdecc72682,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8afdecc72682'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,123.25496196746826,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8afdecc72682.json', u'creation': u'2020-01-02 15:22:36', u'digest': u'e64308212eaa31ef1ecf4735a9c9dbaa017a6561', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6798}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 15:22:19', u'digest': u'e2a8071079eaa067509ec994aa4cc9adf7060801', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 15:20:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 15:22:22', u'digest': u'd623f7d9989790d07f0bc057165f85b0461f5033', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:20:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:22:33', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8afdecc72682'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8afdecc72682 +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:20:08,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,8afdecc72682,5.0,,8.0,,,,,,benchmark7,71.19610786437988 +8f02a2bcc6a8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8f02a2bcc6a8'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,7325.6339230537415,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8f02a2bcc6a8.json', u'creation': u'2020-01-08 20:22:53', u'digest': u'a9f028fecf46e8b0b3a730960d1c64f569219607', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6715}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:22:48', u'digest': u'03e5f534c5ec7a02c61f9cca9bd49bbc79c798b8', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317813}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:19:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:22:50', u'digest': u'5afac4578da1d687934e578f035c78cb713195ac', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:19:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:22:52', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8f02a2bcc6a8'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8f02a2bcc6a8 +","[u'_finished_', u'mprof', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:12,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,petsc,8f02a2bcc6a8,5.0,,8.0,,,,,,benchmark7,6946.392326116562 +8f76367282fa,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8f76367282fa'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,169.97672414779663,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8f76367282fa.json', u'creation': u'2020-01-02 15:23:42', u'digest': u'9880340d542d479287f57588622fc00ae38d1e93', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10427}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 15:22:54', u'digest': u'607f5707efb0e40e25b56ded0fd94e726bb3be1c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141223}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 15:20:29', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 15:23:35', u'digest': u'35c57e5e240f751805dc7458b221ffb0672dbf5f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:20:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:23:41', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8f76367282fa'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8f76367282fa +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:20:28,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,100.0,,explicitDW7a.py,trilinos,8f76367282fa,5.0,,8.0,,,,,,benchmark7,55.55976486206055 +8fdd375df3da,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8fdd375df3da'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,7729.689961910248,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8fdd375df3da.json', u'creation': u'2020-01-08 00:50:30', u'digest': u'5c10f3a40f170169f9e29552bb5a8ec046665119', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6541}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 00:50:30', u'digest': u'b8ea9b5f0b5e961e0e30358c7df30b44b1548c8c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13315357}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:41:20', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 00:50:30', u'digest': u'8fed19296ecc8c04ee3864ab7add6a0e172e06f6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:41:21', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 00:50:30', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8fdd375df3da'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8fdd375df3da +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:41:18,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,1000.0,,explicitDW7a.py,trilinos,8fdd375df3da,5.0,,8.0,,,,,,benchmark7,7634.012614965439 +92e52b044e84,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/92e52b044e84'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,71.09751391410828,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.92e52b044e84.json', u'creation': u'2020-01-03 10:57:59', u'digest': u'78d72e6b5c26a9694b6ea39b8e1e38f000b9d955', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7304}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 10:57:51', u'digest': u'd009c965d536c7ae76e37cd2b840ed6ea122b210', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 10:56:34', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 10:57:55', u'digest': u'81b16a8507ee0be629584bf6f782d88ca740f774', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 10:56:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 10:57:57', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '92e52b044e84'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/92e52b044e84 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 10:56:34,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,92e52b044e84,5.0,,8.0,,,,,,benchmark7,29.08304500579834 +93e187f91055,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/93e187f91055'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': 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32\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '93e187f91055'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 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u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/93e187f91055 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:48:27,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,1000.0,,explicitDW7a.py,petsc,93e187f91055,5.0,,8.0,,,,,,benchmark7,1240.6480150222778 +948e072b412a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/948e072b412a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,56.45360589027405,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.948e072b412a.json', u'creation': u'2020-01-03 11:13:12', u'digest': u'cfbeef98e605bf54f8de34a099c910757e05a3c2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7304}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 11:13:10', u'digest': u'39cbf325690ed2378545494629514856ae1a1d20', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 11:12:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 11:13:10', u'digest': u'5d2949e0513c239cf63ff545feab20c32444decc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 11:12:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 11:13:11', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '948e072b412a'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/948e072b412a +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 11:12:02,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,948e072b412a,5.0,,8.0,,,,,,benchmark7,29.843616008758545 +94a65481724f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/94a65481724f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,4209.604280948639,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.94a65481724f.json', u'creation': u'2020-01-13 23:33:29', u'digest': u'82c4984cf5bef080a666f55f1b2893458eb0624b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7156}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 23:33:25', u'digest': u'829d3336d3a07d22693aa47dd08357a75e4f2005', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13318257}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 22:22:34', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 23:33:26', u'digest': u'4da8d364211824ee7765b817acb1a94a534ae249', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 22:22:34', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 23:33:28', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '94a65481724f'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/94a65481724f +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 22:22:33,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,8.0,4.0,1000.0,,explicitDW7a.py,petsc,94a65481724f,5.0,,8.0,,,,,,benchmark7,4080.891228914261 +96c222f841bb,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/96c222f841bb'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,865.921327829361,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.96c222f841bb.json', u'creation': u'2020-01-14 16:51:40', u'digest': u'cdffc36dbb6ff07ff8adbc0996f4cb887df286fe', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10799}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 16:51:37', u'digest': u'cda705cfcedeedecfa895c8d251bae9c52d6399e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13332592}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 16:34:53', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 16:51:40', u'digest': u'cfdca13ea2a9bb6a7a459e7d97e3872d2f42cf5f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 16:34:53', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 16:51:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '96c222f841bb'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/96c222f841bb +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 16:34:52,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,64.0,4.0,1000.0,,explicitDW7a.py,petsc,96c222f841bb,5.0,,8.0,,,,,,benchmark7,761.2434449195862 +97b19dd01bf2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/97b19dd01bf2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,115.38825607299805,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.97b19dd01bf2.json', u'creation': u'2020-01-07 21:41:06', u'digest': u'2e0725980fa149e600bca0ad66a53989212a541b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8361}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:40:58', u'digest': u'c9616d26200d315950d77299c1d73c78466b9410', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141111}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:38:50', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:41:01', u'digest': u'90908859dbe1a464accce61cbd63be6dd21a212e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:38:50', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:41:04', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '97b19dd01bf2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/97b19dd01bf2 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:38:49,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,100.0,,explicitDW7a.py,trilinos,97b19dd01bf2,5.0,,8.0,,,,,,benchmark7,50.42024493217468 +99c274e6a981,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/99c274e6a981'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,98.9950680732727,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.99c274e6a981.json', u'creation': u'2020-01-08 13:38:59', u'digest': u'62b37989c553b7eed33623e13b040b1f6330ec89', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7497}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 13:38:58', u'digest': u'19ba7fc686413471a24c5fc55cddc7cffbd6513c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 13:37:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 13:38:59', u'digest': u'825916296db12bdea023c98c869d23c11451124a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 13:37:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 13:38:59', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '99c274e6a981'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/99c274e6a981 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 13:36:57,Jonathan Guyer ,4e2f7baf12f9dde0fc0b3a5112730c2933d24993,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,99c274e6a981,5.0,,8.0,,,,,,benchmark7,48.418659925460815 +9a01c58fda62,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/9a01c58fda62'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,130.27742981910706,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.9a01c58fda62.json', u'creation': u'2020-01-02 14:22:49', u'digest': u'0653884e3f19b71fa059a7c0492bebe2280c3480', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10427}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:44', u'digest': u'3ffa48e6252be895f5a8d6858cc8a16d899ea02a', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141223}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:22:46', u'digest': u'9ced79dfaf41d3ff4f8d3f9c898898d39a29da87', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:22:49', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '9a01c58fda62'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/9a01c58fda62 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,100.0,,explicitDW7a.py,trilinos,9a01c58fda62,5.0,,8.0,,,,,,benchmark7,58.41224384307861 +9a6ac7eb1de5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/9a6ac7eb1de5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,172.54375004768372,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.9a6ac7eb1de5.json', u'creation': u'2020-01-02 15:23:44', u'digest': u'93b01926fb85fbfc180fb11b6194ca22a77487e0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7316}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 15:23:34', u'digest': u'12360a35c27b2a2032dacead3990350c6f1f376d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 15:20:25', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 15:23:40', u'digest': u'21e64df189cfd67f7a4558602908f9e9b4218b37', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 15:20:27', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 15:23:43', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '9a6ac7eb1de5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/9a6ac7eb1de5 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r001', u'scaling']",2020-01-02 15:20:23,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,9a6ac7eb1de5,5.0,,8.0,,,,,,benchmark7,61.46771502494812 +a5ab1fa2487d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a5ab1fa2487d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,191.58337712287903,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', 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u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a5ab1fa2487d +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:11:15,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,100.0,,explicitDW7a.py,trilinos,a5ab1fa2487d,5.0,,8.0,,,,,,benchmark7,57.5860869884491 +a717a28c9474,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a717a28c9474'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a717a28c9474 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 21:00:48,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,1000.0,,explicitDW7a.py,petsc,a717a28c9474,5.0,,8.0,,,,,,benchmark7,1112.5710830688477 +ab29c44ae7ec,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ab29c44ae7ec'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,77.76155710220337,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ab29c44ae7ec.json', u'creation': u'2020-01-02 16:47:14', u'digest': u'759d45c4dd3caf16e0efbb7df87b849d845ea279', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7304}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 16:47:00', u'digest': u'50b396732abc96549d7bed652e771521901741d6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 16:44:57', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 16:47:02', u'digest': u'96b5f696a21aa3b2cc177ca650d9ca083661b79c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 16:45:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 16:47:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ab29c44ae7ec'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ab29c44ae7ec +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-02 16:44:56,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,ab29c44ae7ec,5.0,,8.0,,,,,,benchmark7,29.0496928691864 +abd4dea118f2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/abd4dea118f2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,151.4697780609131,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.abd4dea118f2.json', u'creation': u'2020-01-07 21:35:55', u'digest': u'5b26d2ab1074f739730c354d88edd874fc363759', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6800}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:35:44', u'digest': u'230074b5723d5f101bff8dc20e73beb091664ec4', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141132}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:33:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:35:47', u'digest': u'4b079a941047dfc46c8863e753dca2e67f23ab30', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:33:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:35:53', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'abd4dea118f2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/abd4dea118f2 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:33:00,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,trilinos,abd4dea118f2,5.0,,8.0,,,,,,benchmark7,65.11845898628235 +ada01d307016,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ada01d307016'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,119.34780406951904,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ada01d307016.json', u'creation': u'2020-01-02 16:20:08', u'digest': u'919a8a0ff507edea3c0f7e3e2170632f7aef53da', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6792}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 16:20:04', u'digest': u'02a0eafb75e09c30228e3a622c20fa0ac38c2afc', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 16:18:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 16:20:06', u'digest': u'7201bde7e7f9bacf8067d89b385f6fb89063e814', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 16:18:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 16:20:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ada01d307016'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ada01d307016 +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-02 16:17:59,Jonathan Guyer ,335eba0d5a70fad7828b72407d85229218b50979,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,ada01d307016,5.0,,8.0,,,,,,benchmark7,91.53249192237854 +b14b0ab20d5a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b14b0ab20d5a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,114.71426510810852,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b14b0ab20d5a.json', u'creation': u'2020-01-03 10:35:40', u'digest': u'468332f77e086dcbe1e57b7c9777023a76bc8599', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 10:35:39', u'digest': u'e4cf769b0f01b75ac800c8381840cfe094cd2a3a', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 10:33:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 10:35:39', u'digest': u'c928cc862e9f74758b382af423b93fb6c1730494', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 10:33:38', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 10:35:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b14b0ab20d5a'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b14b0ab20d5a +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 10:33:37,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,b14b0ab20d5a,5.0,,8.0,,,,,,benchmark7,92.44001507759094 +b1d990033949,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b1d990033949'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2172.2611508369446,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b1d990033949.json', u'creation': u'2020-01-13 15:25:36', u'digest': u'620828aa2b262750860d62f7b7344135909fd87a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8716}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 15:25:05', u'digest': u'1dcf72499b04b6d6c6f67d39d2a0ac93f56a7a54', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13334461}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 14:48:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 15:25:32', u'digest': u'f3f497294b2af86a1fff9043780762f7c655f91c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 14:48:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 15:25:36', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b1d990033949'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b1d990033949 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:48:27,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,1000.0,,explicitDW7a.py,petsc,b1d990033949,5.0,,8.0,,,,,,benchmark7,1996.4240310192108 +b223523af847,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b223523af847'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1178.7755069732666,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b223523af847.json', u'creation': u'2020-01-07 23:00:14', u'digest': u'6e3cd3a911c926bedb2ec20b06d596a666a84132', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10444}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 23:00:13', u'digest': u'806426ab353b72baea520446f3491c7c0a97330d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13324140}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:40:27', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 23:00:14', u'digest': u'669d958bc9fecb64aaceda9b323b386a4d1aa4c5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:40:27', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 23:00:14', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b223523af847'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b223523af847 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:40:26,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,1000.0,,explicitDW7a.py,trilinos,b223523af847,5.0,,8.0,,,,,,benchmark7,1098.5262649059296 +b601aa5d0084,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b601aa5d0084'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1908.7725911140442,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b601aa5d0084.json', u'creation': u'2020-01-16 13:37:31', u'digest': u'736684432b6dc86002c108840a55f90bce0e68b5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6899}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-16 13:36:26', u'digest': u'2cf3fb69a02b9d6261a8019308547eb1eed77d30', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317436}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-16 13:04:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-16 13:37:26', u'digest': u'f88a5d05d4d70e8a4c6262a95be0fd2218e92508', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-16 13:04:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-16 13:37:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': pysparse\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b601aa5d0084'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b601aa5d0084 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-16 13:04:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,pysparse,b601aa5d0084,5.0,,8.0,,,,,,benchmark7,1733.358880996704 +ba25b36140d9,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ba25b36140d9'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,125.08132100105286,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ba25b36140d9.json', u'creation': u'2020-01-07 21:20:32', u'digest': u'aade9d9540d739a22ecc7d2b1adae84831156cb8', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8361}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:20:28', u'digest': u'c8d400efd1833e442762bbaecc95b4e1f98f3da6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141111}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:18:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:20:31', u'digest': u'2b49331bdf3bcdab7869c2369a5698d14cad7ddd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:18:07', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:20:32', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ba25b36140d9'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ba25b36140d9 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:17:48,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,100.0,,explicitDW7a.py,trilinos,ba25b36140d9,5.0,,8.0,,,,,,benchmark7,62.37922501564026 +ba52a5d4f60e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ba52a5d4f60e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,151.57767796516418,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ba52a5d4f60e.json', u'creation': u'2020-01-07 21:21:38', u'digest': u'927b006d96414749d8fb2650bc7f9712852ea85b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6800}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:21:31', u'digest': u'233b0f904bbf8686f936db75882f1b2646034393', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141132}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:18:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:21:33', u'digest': u'1606a717f72efdd909f592de34043896cf4237bc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:18:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:21:36', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ba52a5d4f60e'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ba52a5d4f60e +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:18:11,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,trilinos,ba52a5d4f60e,5.0,,8.0,,,,,,benchmark7,65.51749587059021 +c39bebc0d2ec,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c39bebc0d2ec'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,125.6754469871521,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c39bebc0d2ec.json', u'creation': u'2020-01-07 21:48:36', u'digest': u'fe8c768a41a5c758f3d7138ef9151b9d357778d2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14603}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:48:35', u'digest': u'33029e792c360cedecd382109d6798f945fc26c8', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:46:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:48:36', u'digest': u'd87c7b4501be8948199ecb629b0aacdfa1f8cf0c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:46:17', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:48:36', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c39bebc0d2ec'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c39bebc0d2ec +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:46:14,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,100.0,,explicitDW7a.py,trilinos,c39bebc0d2ec,5.0,,8.0,,,,,,benchmark7,63.49364900588989 +c5906af6f8ee,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c5906af6f8ee'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2166.119624853134,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c5906af6f8ee.json', u'creation': u'2020-01-14 17:31:16', u'digest': u'631431575efdb01bde5f178820e88c30e9ca7241', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7678}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 17:31:05', u'digest': u'041b48903fd604966e3998083f629a06fcbda285', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317194}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 16:54:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 17:31:08', u'digest': u'd2d09c4ef7b1992e6e7b0e65f8c569036a25907b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 16:54:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 17:31:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 16\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c5906af6f8ee'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c5906af6f8ee +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 16:54:44,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,64.0,16.0,1000.0,,explicitDW7a.py,petsc,c5906af6f8ee,5.0,,8.0,,,,,,benchmark7,2016.224317073822 +c6db08018687,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c6db08018687'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,107.79266810417175,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c6db08018687.json', u'creation': u'2020-01-03 13:54:03', u'digest': u'de9e15df230c59ed8d5abf60941acde0a4d326c3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 13:53:56', u'digest': u'4d7eb418f6b686331f81c819bee4b79f88745c91', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:52:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 13:53:58', u'digest': u'0fd2ba08d6067873198f591597bd582a96e0c137', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:52:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 13:54:01', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c6db08018687'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c6db08018687 +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:52:04,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,c6db08018687,5.0,,8.0,,,,,,benchmark7,51.97508502006531 +cb457cdfb77e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/cb457cdfb77e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,118.56237387657166,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.cb457cdfb77e.json', u'creation': u'2020-01-03 11:04:39', u'digest': u'884653e218c18167ed0344941a3ccf87c4fa1592', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 11:04:38', u'digest': u'cdb476eb912a54b51ebff7dbcff5e08956709e5f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 11:02:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 11:04:39', u'digest': u'951777a0dfca7ccb3b973bcd2482f587b0f14c6f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 11:02:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 11:04:39', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'cb457cdfb77e'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cb457cdfb77e +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 11:02:35,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,cb457cdfb77e,5.0,,8.0,,,,,,benchmark7,94.14365911483765 +cb6b0ab67ef1,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/cb6b0ab67ef1'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,3917.505350112915,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.cb6b0ab67ef1.json', u'creation': u'2020-01-08 22:47:53', u'digest': u'914be5bbaed7f7e8c3c3a0cbb7978b2617739fd2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7498}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 22:47:52', u'digest': u'6ec5b14640ef07b15442aa03b9fd5921ecb667a6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13293769}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 21:42:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 22:47:53', u'digest': u'0fbc3e5f81d682fff3088efaa8d81c8ded0cd4e7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 21:42:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 22:47:53', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'cb6b0ab67ef1'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cb6b0ab67ef1 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 21:42:08,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,1000.0,,explicitDW7a.py,trilinos,cb6b0ab67ef1,5.0,,8.0,,,,,,benchmark7,2476.8258650302887 +cc2e7ec57a19,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/cc2e7ec57a19'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,240.65271520614624,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.cc2e7ec57a19.json', u'creation': u'2020-01-07 21:37:17', u'digest': u'85c2c5bb2608eb8ffd4c67ada4c94a83fc9caa32', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6540}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:35:35', u'digest': u'd93528ef362c337459078b6f49a159c37106724e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:32:52', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:36:49', u'digest': u'9dabe260937244a79dfa02d18800545537e14e6e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:32:55', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:37:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'cc2e7ec57a19'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cc2e7ec57a19 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:32:51,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,cc2e7ec57a19,5.0,,8.0,,,,,,benchmark7,82.1222870349884 +d1f99cecfb43,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d1f99cecfb43'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,150.34649014472961,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d1f99cecfb43.json', u'creation': u'2020-01-07 21:36:05', u'digest': u'12c6744f2e781c4ced50b3d663ca36deefb51e8b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:36:01', u'digest': u'85efc0b2a64de4f8f2d379737e510d9cc46009cb', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:33:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:36:02', u'digest': u'e23f1f90ce606eca35ee3bdb3aa28cfadd3bb06d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:33:18', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:36:03', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd1f99cecfb43'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d1f99cecfb43 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:33:15,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,d1f99cecfb43,5.0,,8.0,,,,,,benchmark7,54.98037314414978 +d4d9f115fd9c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d4d9f115fd9c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2866.711128950119,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d4d9f115fd9c.json', u'creation': u'2020-01-07 23:28:44', u'digest': u'f8b648ad2a5dc978c12e4e754b723a86e52e9971', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7321}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 23:28:41', u'digest': u'b442337aab988fe122e79c7c70996bae10a10c36', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13294033}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 22:40:49', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 23:28:41', u'digest': u'968f6a4865bcd369b813868775adce004e88d779', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 22:40:49', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 23:28:43', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd4d9f115fd9c'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d4d9f115fd9c +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 22:40:48,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,1000.0,,explicitDW7a.py,trilinos,d4d9f115fd9c,5.0,,8.0,,,,,,benchmark7,2782.6140999794006 +d53ef6aabd29,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d53ef6aabd29'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,150.74492406845093,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d53ef6aabd29.json', u'creation': u'2020-01-03 10:47:43', u'digest': u'65e0064ebcf25c845578f4afed8d1dbe3d4d0113', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6792}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 10:47:36', u'digest': u'5cd5e568b84c16480d2712869d771344d11ffbd6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 10:44:58', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 10:47:39', u'digest': u'ec3212839891fc534c083a3824d79d468fd79dc6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 10:45:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 10:47:42', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd53ef6aabd29'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'129.6.153.46', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 3.16.74-1 (2019-09-24)', u'release': u'3.16.0-10-amd64', u'network_name': u'benson', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d53ef6aabd29 +","[u'_finished_', u'benson', u'master', u'scaling']",2020-01-03 10:44:57,Jonathan Guyer ,72ad75afdd5c433e3d89a3f5a63e577d7e8fd769,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,d53ef6aabd29,5.0,,8.0,,,,,,benchmark7,98.63544297218323 +d61061f7b2e2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d61061f7b2e2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,3015.778657913208,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d61061f7b2e2.json', u'creation': u'2020-01-13 15:39:39', u'digest': u'efb73291f974508e7cff7e3dadb91b3a6167247d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7676}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 15:39:36', u'digest': u'5d04ca187e7bda8c76c630e6e2d1f89d779b81e0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13318791}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 14:48:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 15:39:38', u'digest': u'89a93bddb68bc3c6c75210d5e332cf97758beb51', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 14:48:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 15:39:39', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd61061f7b2e2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d61061f7b2e2 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:48:27,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,1000.0,,explicitDW7a.py,petsc,d61061f7b2e2,5.0,,8.0,,,,,,benchmark7,2876.842308998108 +d9f7501d0c87,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d9f7501d0c87'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,122.62131905555725,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d9f7501d0c87.json', u'creation': u'2020-01-03 13:54:03', u'digest': u'b9952f2922581d281592ed2ee7ed355f7bdb35d7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7320}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-03 13:53:56', u'digest': u'4d7eb418f6b686331f81c819bee4b79f88745c91', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141073}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-03 13:51:27', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-03 13:53:59', u'digest': u'83946c124475021fc881f8e8023b841b0233a471', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-03 13:51:28', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-03 13:54:02', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 0\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd9f7501d0c87'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.41', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r041', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d9f7501d0c87 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r041', u'scaling']",2020-01-03 13:51:27,Jonathan Guyer ,6f50b32f5311d6efc1db0f1ba01a7f17a75130cc,1.0,0.5,1.e0,0.01,,,0.0004,0.0,1.0,1.0,2.0,100.0,,explicitDW7a.py,trilinos,d9f7501d0c87,5.0,,8.0,,,,,,benchmark7,51.98317813873291 +dcaa4234a6ea,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/dcaa4234a6ea'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1421.7174789905548,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.dcaa4234a6ea.json', u'creation': u'2020-01-14 10:12:41', u'digest': u'a58d5272673f8ffec5220211cf0081554cbe033e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8717}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 10:12:35', u'digest': u'996ce72d8e59908eda8375da0514922852a0a457', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13334369}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 09:47:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 10:12:39', u'digest': u'688a6bb58ea5e1584853fc94a51abf5a91869ebc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 09:47:06', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 10:12:41', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'dcaa4234a6ea'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/dcaa4234a6ea +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 09:47:02,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,1000.0,,explicitDW7a.py,petsc,dcaa4234a6ea,5.0,,8.0,,,,,,benchmark7,1314.3096189498901 +e36bee269820,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e36bee269820'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,8244.105864048004,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e36bee269820.json', u'creation': u'2020-01-08 16:54:30', u'digest': u'1ee7dee48d863a20c405c4581f099accc33f81d0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6718}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 16:54:24', u'digest': u'dd1ce015744eed3d4dfc1e334832c38e5b66bcec', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13316338}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 14:36:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 16:54:27', u'digest': u'd1fb709a325d1c0dc85f598c0488f56d54d2ead7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 14:36:55', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 16:54:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e36bee269820'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e36bee269820 +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:50,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,trilinos,e36bee269820,5.0,,8.0,,,,,,benchmark7,8045.972098112106 +e52313ae6f63,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e52313ae6f63'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2485.3730590343475,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e52313ae6f63.json', u'creation': u'2020-01-13 23:04:44', u'digest': u'26580b04315781052a8cc46e79961e271961782a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7677}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 23:04:33', u'digest': u'c1f1d57f091f12bc34de1f20d5fde4a2cf2bb879', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13317812}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 22:22:28', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 23:04:41', u'digest': u'0a648c7462254554d376a098e38e255c1a797c2c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 22:22:29', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 23:04:44', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e52313ae6f63'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e52313ae6f63 +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 22:22:26,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,16.0,4.0,1000.0,,explicitDW7a.py,petsc,e52313ae6f63,5.0,,8.0,,,,,,benchmark7,2381.376494884491 +e661bc820774,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e661bc820774'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1022.495954990387,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e661bc820774.json', u'creation': u'2020-01-14 12:05:56', u'digest': u'e597193669ea716dd5f0db92de8708db65edb83f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10799}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-14 12:05:55', u'digest': u'971c97a00d32a3b617784f8fadef8a9e45e22f4d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13332533}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-14 11:45:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-14 12:05:56', u'digest': u'0cf955f52003fbd1ce3f7c4f1e4a0da8d2a870af', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-14 11:45:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-14 12:05:56', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e661bc820774'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e661bc820774 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-14 11:45:46,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,1000.0,,explicitDW7a.py,petsc,e661bc820774,5.0,,8.0,,,,,,benchmark7,718.0059621334076 +ee85faf19ea0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ee85faf19ea0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,129.64964413642883,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ee85faf19ea0.json', u'creation': u'2020-01-07 21:45:01', u'digest': u'31ee8ede7b8cb184edf96030f63961a01debe2d6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10443}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:44:52', u'digest': u'af98a98e55e2bc099d712e344bc465a2e9f1b6f1', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141240}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:42:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:45:00', u'digest': u'cacef3f5e47092065b65056854a930d554c4ec50', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:42:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:45:01', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ee85faf19ea0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ee85faf19ea0 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:42:30,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,100.0,,explicitDW7a.py,trilinos,ee85faf19ea0,5.0,,8.0,,,,,,benchmark7,60.58194398880005 +f123f45f3093,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f123f45f3093'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,2857.383502960205,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f123f45f3093.json', u'creation': u'2020-01-08 15:24:43', u'digest': u'6b6880b28aa7c94329106252a5d68d2ddef6066a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7498}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 15:24:05', u'digest': u'4281dd9eeae7d6ecbf930b817d931338ea76250b', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13293769}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 14:36:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 15:24:40', u'digest': u'b617de4033e6b7c6f33fda6ad3e645c6f8309ad9', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 14:36:49', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 15:24:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f123f45f3093'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f123f45f3093 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:46,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,1000.0,,explicitDW7a.py,trilinos,f123f45f3093,5.0,,8.0,,,,,,benchmark7,2720.434578180313 +f199dd308431,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f199dd308431'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,177.03945803642273,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f199dd308431.json', u'creation': u'2020-01-07 21:21:50', u'digest': u'1a6500b07afde1ee3cbfa17b7c9f34bd4e218686', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6540}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-07 21:21:46', u'digest': u'e93fba0e1659bb67f96870521d016a29032b44d6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141207}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-07 21:18:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-07 21:21:48', u'digest': u'e927a9fd15890257c60305c27f90412a36b04363', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-07 21:18:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-07 21:21:50', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f199dd308431'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f199dd308431 +","[u'_finished_', u'master', u'r049', u'scaling']",2020-01-07 21:18:17,Jonathan Guyer ,de7c1d31bb5b2813643289bb5806423b531cb939,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,f199dd308431,5.0,,8.0,,,,,,benchmark7,84.46828198432922 +f25232f1ba1d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f25232f1ba1d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,220.16279411315918,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f25232f1ba1d.json', u'creation': u'2020-01-13 14:40:43', u'digest': u'def693e0cdc137d38a392a3eb46eaa983ece3a54', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6897}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 14:40:31', u'digest': u'31b25bed57c82def6c3bb4c8c48525dd60bd0998', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13040262}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 14:36:17', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 14:40:38', u'digest': u'8ccb5a5917cf04adb027c78366a0c04e25fa2bb3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 14:36:20', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 14:40:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f25232f1ba1d'\nsweeps: 5\ntotaltime: 0.08\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f25232f1ba1d +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 14:36:16,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,1000.0,,explicitDW7a.py,petsc,f25232f1ba1d,5.0,,0.08,,,,,,benchmark7,59.04329705238342 +f41bc322992c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f41bc322992c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,138.67624402046204,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f41bc322992c.json', u'creation': u'2020-01-02 14:22:59', u'digest': u'1bca5f403afc2693b0c1862106a86a664f61319a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6798}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:52', u'digest': u'e5ebfb78eb6f40477bd4b4228aebb137b51f0c67', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:22:53', u'digest': u'1dc28eb344a5b1fe8f80a7591e46c91e6cc4c8a3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:22:57', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f41bc322992c'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f41bc322992c +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,f41bc322992c,5.0,,8.0,,,,,,benchmark7,67.32666492462158 +f60f679f6d6e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f60f679f6d6e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1613.4509479999542,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f60f679f6d6e.json', u'creation': u'2020-01-13 22:50:25', u'digest': u'f36450a4ec429505421ba20eda36c84e4a14ddba', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8716}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-13 22:50:22', u'digest': u'3c7d22f17a881ad3f9cf1e3cd6ae844e2484c66a', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13335974}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-13 22:23:24', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-13 22:50:24', u'digest': u'fd30e867555a8718c28a47448a4aa9c2821ea9f2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-13 22:23:26', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-13 22:50:25', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 0\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 4\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f60f679f6d6e'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 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u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f60f679f6d6e +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-13 22:23:23,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,0.0,1.0,2.0,4.0,1000.0,,explicitDW7a.py,petsc,f60f679f6d6e,5.0,,8.0,,,,,,benchmark7,1457.133022069931 +fb978eda8bc0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/fb978eda8bc0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.fb978eda8bc0.json', u'creation': u'2020-01-02 14:22:56', u'digest': u'3636036d93e9849f9df9a40d05f0c787299abb7a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8352}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-02 14:22:49', u'digest': u'a75a05c3b772a27c29956a51eb503b2648be03a6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-02 14:20:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-02 14:22:52', u'digest': u'2959b928d0269bdd467e82ac079a1ff5084c3d78', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-02 14:20:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-02 14:22:54', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'fb978eda8bc0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/fb978eda8bc0 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'scaling', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-02 14:20:13,Jonathan Guyer ,f8fa361b0ec96a0e88ef55a5105e911c486ed71b,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,100.0,,explicitDW7a.py,trilinos,fb978eda8bc0,5.0,,8.0,,,,,,benchmark7,59.202173948287964 +fcb80b5b4a7f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/fcb80b5b4a7f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,4592.4386649131775,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.fcb80b5b4a7f.json', u'creation': u'2020-01-08 15:53:38', u'digest': u'5bc06509f729493f9f9ebb7436798d6e6efb47c8', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6978}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 15:53:21', u'digest': u'4e6d2495f9154df68bc55fb874bc9a4148b3d7e0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13271348}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 14:36:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 15:53:38', u'digest': u'4a5a346d648c7a269e4a57dcf2cea6aee10a881a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 14:36:53', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 15:53:38', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'fcb80b5b4a7f'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/fcb80b5b4a7f +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 14:36:49,Jonathan Guyer ,148e8112fe03784b4c39e53b38db7c8b7e457484,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,1000.0,,explicitDW7a.py,trilinos,fcb80b5b4a7f,5.0,,8.0,,,,,,benchmark7,4452.270643949509 +fcf2c20e7578,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/fcf2c20e7578'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1076.8423218727112,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.fcf2c20e7578.json', u'creation': u'2020-01-08 16:54:29', u'digest': u'fab069b98cc46cee394f71d88ae1dbe80952c6de', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10621}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 16:54:24', u'digest': u'5fad72b5779320af17b3d0d9889a1f5047e35a4a', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 13323148}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 16:36:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 16:54:26', u'digest': u'15a931c5d85a1652f67cfae010be2e1c9ff02012', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 16:36:10', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 16:54:28', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 1000\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'fcf2c20e7578'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/fcf2c20e7578 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'master', u'mprof', u'r049', u'scaling']",2020-01-08 16:36:07,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,1000.0,,explicitDW7a.py,trilinos,fcf2c20e7578,5.0,,8.0,,,,,,benchmark7,921.127249956131 diff --git a/documentation/pyplots/scaling.py b/documentation/pyplots/scaling.py new file mode 100644 index 0000000000..9402d19264 --- /dev/null +++ b/documentation/pyplots/scaling.py @@ -0,0 +1,39 @@ +from __future__ import unicode_literals +from matplotlib import pyplot as plt +import matplotlib.ticker as ticker +import pandas as pd +import numpy as np + +df = pd.read_csv("scaling.csv", comment='#') + +df = df[(df['totaltime'] == 8.0) & (df['nx'] == 1000)] +df = df[df['nthreads'] * df['ncpus'] == df['nslots']] + +baseline = df[df['solver'] == "pysparse"].iloc[0].solvetime +df['speedup'] = baseline / df['solvetime'] + +fig, ax = plt.subplots(figsize=(10,8)) + +colors = dict(petsc='blue', trilinos='red', pysparse='orange', scipy='green') +markers = dict(petsc='x', trilinos='+', pysparse='^', scipy='v') +linestyles = {1: '-', 2: '--', 4: '-.', 16: ':'} + +for solver, group1 in df.groupby('solver'): + for nthreads, group2 in group1.groupby('nthreads'): + stats = group2.groupby('nslots') + ax.errorbar(stats.mean().speedup.index, stats.mean().speedup, yerr=stats.std().speedup, + marker=markers[solver], color=colors[solver], linestyle=linestyles[nthreads], linewidth=2, + markersize=12, label="{} - {:.0f} thread(s)".format(solver, nthreads)) + +plt.xscale('log') +plt.yscale('log') + +for axis in [ax.xaxis, ax.yaxis]: + axis.set_major_formatter(ticker.FuncFormatter(lambda y,pos: ('{{:.{:1d}f}}'.format(int(np.maximum(-np.log10(y),0)))).format(y))) + +plt.legend(loc="lower right", frameon=False, handlelength=5) + +plt.xlabel("# tasks") +plt.ylabel(r"speedup ($t_{\mathrm{PySparse}} / t_N$)") + +plt.show() diff --git a/documentation/pyplots/threadanalyze.csv b/documentation/pyplots/threadanalyze.csv deleted file mode 100644 index 063285490a..0000000000 --- a/documentation/pyplots/threadanalyze.csv +++ /dev/null @@ -1,74 +0,0 @@ -# Data extracted from CTCMS.nist.gov:/data/guyer/CHiMaDPhaseFieldVI -# Extracted from sumatra records that were tagged [`__finished__`, `threads`] -# Data was generated with threadtest.{py,sh} to compare tradeoffs between -# MPI cpus and OpenMP threads using a Method of Manufactured Solutions -# Allen-Can problem based on https://pages.nist.gov/pfhub/benchmarks/benchmark7.ipynb -label,datastore,dependencies,diff,duration,executable,input_data,input_datastore,launch_mode,main_file,outcome,output_data,parameters,platforms,reason,repeats,repository,script_arguments,stdout_stderr,tags,timestamp,user,version,Lx,Ly,checkpoint,dt,input,iterations,kappa_x,ncpus,nproc,nslots,nthreads,nx,preconditioner,script,solver,sumatra_label,sweeps,tolerance,totaltime,dt_exact,eq,eta,kappa_y,numsteps,solvetime -eb405e77fd58,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/eb405e77fd58'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,64.9848129749,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda2/envs/fipy/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.91922c0d-ee14-4443-afee-5d3bd9d6d47e.json', u'creation': u'2018-02-26 09:16:45', u'digest': u'c793100a33e9f9280d2da8057090f6835bb8f619', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 75}}, {u'path': u'Sumatra.c103075afbc8.json', u'creation': u'2018-02-26 09:16:45', u'digest': u'dd48d1534897f9d3c783694b332df045a560f0a7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 13410}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-26 09:16:43', u'digest': u'8b1d6f99007ef5033b5dee9c6b449da0e9359ff8', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110717}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 4\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr [\n !!python/unicode 'c103075afbc8']\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c103075afbc8 -","[u'_finished_', u'benchmark7a', u'threads']",2018-02-26 09:15:47,Jonathan Guyer ,873842924e88d08afc244316a77d9ff25f790845,1.0,0.5,,0.01,,,0.0004,4.0,,16.0,4.0,400.0,,,,c103075afbc8,,,0.8,,,,,,25.8317019939 -8f9de00a645f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8f9de00a645f'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,66.9076938629,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda2/envs/fipy/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.3ae49156-2794-4553-99bd-0a95a2b81982.json', u'creation': u'2018-02-27 10:50:32', u'digest': u'611a9497c996e4cc53977511b8542bef9d5253de', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 75}}, {u'path': u'Sumatra.8f9de00a645f.json', u'creation': u'2018-02-27 10:50:32', u'digest': u'6f23145c6d2dc13f74730fefefe610af4c8b27f0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 15538}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-27 10:50:31', u'digest': u'a6ef32840da624da74f7d71d4fddd0f1a128950e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110322}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr [\n !!python/unicode '8f9de00a645f']\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8f9de00a645f -","[u'_finished_', u'benchmark7a', u'threads']",2018-02-27 10:49:31,Jonathan Guyer ,4aa3861c78179cea41f0bb2ef30bb3738acf67aa,1.0,0.5,,0.01,,,0.0004,4.0,,8.0,1.0,400.0,,,,8f9de00a645f,,,0.8,,,,,,25.0136749744 -c1dbeb30ef8f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c1dbeb30ef8f'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,77.8369159698,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda2/envs/fipy/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.63e95ad0-b74d-4653-840a-31ee69bd39b4.json', u'creation': u'2018-02-27 10:57:14', u'digest': u'682f0427bb0a958722ee66befde528d9fd126958', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 76}}, {u'path': u'Sumatra.c1dbeb30ef8f.json', u'creation': u'2018-02-27 10:57:15', u'digest': u'b607f2e92ae18fc995a10fca5eb726a33e20d080', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 15538}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-27 10:57:10', u'digest': u'bf5f107abe7f172262cd1de209a7262393b8325c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110322}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr [\n !!python/unicode 'c1dbeb30ef8f']\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c1dbeb30ef8f -","[u'_finished_', u'benchmark7a', u'threads']",2018-02-27 10:55:50,Jonathan Guyer ,4aa3861c78179cea41f0bb2ef30bb3738acf67aa,1.0,0.5,,0.01,,,0.0004,4.0,,8.0,1.0,400.0,,,,c1dbeb30ef8f,,,0.8,,,,,,23.870251894 -7b06c69e6644,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7b06c69e6644'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,304.737293005,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda2/envs/fipy/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.1df13a7d-f52d-4a6e-88f8-88ea13cf7de0.json', u'creation': u'2018-02-27 14:13:58', u'digest': u'48538fd9b4430cbee9c2f13a108b9662ef3bcbdf', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 75}}, {u'path': u'Sumatra.cc81b8470df6.json', u'creation': u'2018-02-27 14:13:58', u'digest': u'd95e7918bb27827ef840d5b0044f0f9a1ff33425', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 13410}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-27 14:13:57', u'digest': u'597a8d6cd731bef0f76c257440702f794816e0e3', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2097249}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.001\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr [\n !!python/unicode 'cc81b8470df6']\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cc81b8470df6 -","[u'_finished_', u'benchmark7a', u'threads']",2018-02-27 14:07:08,Jonathan Guyer ,c0a64b6a200f29eb7ab6d4b1c0e89813949c9fce,1.0,0.5,,0.001,,,0.0004,4.0,,8.0,1.0,400.0,,,,cc81b8470df6,,,0.8,,,,,,251.000786066 diff --git a/documentation/pyplots/threadanalyze.py b/documentation/pyplots/threadanalyze.py deleted file mode 100644 index a9a9e82c38..0000000000 --- a/documentation/pyplots/threadanalyze.py +++ /dev/null @@ -1,24 +0,0 @@ -from __future__ import unicode_literals -from matplotlib import pyplot as plt -import pandas as pd - -df = pd.read_csv("threadanalyze.csv", comment='#') - -df = df[df['nthreads'] * df['ncpus'] == df['nslots']] - -slots16 = df[df['nslots'] == 16] -slots32 = df[df['nslots'] == 32] - -av = slots16.groupby('nthreads').mean() -sd = slots16.groupby('nthreads').std() - -# plt.plot(slots16['nthreads'], slots16['solvetime'], linestyle="", marker="+", color='blue', label="16 slots") -plt.errorbar(av['solvetime'].index, av['solvetime'].values, yerr=sd['solvetime'].values, linestyle="", marker="o", color='blue', label="16 slots") -plt.plot(slots32['nthreads'], slots32['solvetime'], linestyle="", marker="+", color='red', label="32 slots") - -plt.legend(loc="upper right") - -plt.xlabel("# threads") -plt.ylabel("time / s") - -plt.show() diff --git a/documentation/pyplots/threading.csv b/documentation/pyplots/threading.csv new file mode 100644 index 0000000000..40000c2b26 --- /dev/null +++ b/documentation/pyplots/threading.csv @@ -0,0 +1,2803 @@ + +# Data extracted from CTCMS.nist.gov:/data/guyer/CHiMaDPhaseFieldVI +# Extracted from sumatra records that were tagged [`__finished__`, `threading`] +# Data was generated with threadtest.{py,sh} to compare tradeoffs between +# MPI cpus and OpenMP threads using a Method of Manufactured Solutions +# Allen-Can problem based on https://pages.nist.gov/pfhub/benchmarks/benchmark7.ipynb +label,datastore,dependencies,diff,duration,executable,input_data,input_datastore,launch_mode,main_file,outcome,output_data,parameters,platforms,reason,repeats,repository,script_arguments,stdout_stderr,tags,timestamp,user,version,Lx,Ly,checkpoint,dt,input,iterations,kappa_x,ncpus,nproc,nslots,nthreads,nx,preconditioner,script,solver,sumatra_label,sweeps,tolerance,totaltime,dt_exact,eq,eta,kappa_y,numsteps,smt_project,solvetime +0044907501e4,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0044907501e4'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': 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u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,82.56094980239868,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0044907501e4.json', u'creation': u'2019-12-30 17:50:26', u'digest': u'e983367f4209d90946373837e3cf857f768bf805', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6795}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:21', u'digest': u'648daad2ea9a9b9ab9697545fd148f6211626d7d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141113}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:25', u'digest': u'b6e545957d41b7c802e92e16a6091730a4c1a311', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:26', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0044907501e4'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0044907501e4 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,petsc,0044907501e4,5.0,,8.0,,,,,,benchmark7,43.32176494598389 +00f6ef161074,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/00f6ef161074'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', 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u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.cde7bae5-d064-486b-92a0-bb6b074c1c9f.json', u'creation': u'2018-02-25 09:50:04', u'digest': u'318bc4d705dc0a97642cd48687db6f12270b51dc', u'metadata': {u'mimetype': u'application/json', u'size': 75, u'encoding': None}}, {u'path': u'Sumatra.00f6ef161074.json', u'creation': u'2018-02-25 09:50:04', u'digest': u'0d0f63e78306a2ad5019169ec2eff8c2a36dbcf9', u'metadata': {u'mimetype': u'application/json', u'size': 12688, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-25 09:50:03', u'digest': u'e485218401b9b691d44c9f8fa97ab397f9abe0dc', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2108201, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 16\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '00f6ef161074'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/00f6ef161074 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 09:48:47,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,1.0,,16.0,16.0,400.0,,,,00f6ef161074,,,0.8,,,,,,benchmark7,39.50047206878662 +031854b0c1b7,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/031854b0c1b7'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,95.4601948261261,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.031854b0c1b7.json', u'creation': u'2019-12-30 17:48:30', u'digest': u'17c564507355e6518575864ac474655dda9a8125', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6798}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:48:25', u'digest': u'eccbd541d20949288a27081cd70758516480d715', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:48:27', u'digest': u'f2bd27d1aad9908c8a7a4f19a24ee25cea43a850', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:48:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '031854b0c1b7'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/031854b0c1b7 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,8.0,4.0,100.0,,explicitDW7a.py,trilinos,031854b0c1b7,5.0,,8.0,,,,,,benchmark7,47.91150116920471 +04b72369f74d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/04b72369f74d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,194.08599591255188,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/04d67db62c77 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 09:55:16,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,16.0,,32.0,2.0,400.0,,,,04d67db62c77,,,0.8,,,,,,benchmark7,15.85088300704956 +054e4203c6e2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/054e4203c6e2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,234.99928617477417,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.054e4203c6e2.json', u'creation': u'2019-12-30 17:34:13', u'digest': u'ee0089fa05a6dc17fe6a75cd3d97090c9ec4b3a6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8353}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:33:04', u'digest': u'9a91c7d9cac25ac04be0209e49e42891e74b5ef6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:31:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:33:51', u'digest': u'cb16a58a0a8c1ec36f9d28958cadfd66b492f443', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:31:03', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:34:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '054e4203c6e2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/054e4203c6e2 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:31:00,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,100.0,,explicitDW7a.py,trilinos,054e4203c6e2,5.0,,8.0,,,,,,benchmark7,29.732311010360718 +0550ee609581,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0550ee609581'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,66.82438397407532,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0550ee609581.json', u'creation': u'2020-01-08 19:31:08', u'digest': u'f6a60507d70714d9a791ea09785867d2b715612d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7491}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:30:44', u'digest': u'3e3c50e465aa24f375ec4036d22b0cbd215692a2', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110540}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:26:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:30:54', u'digest': u'ad1008b0666e33e198f4086ef6ae1268fdffba16', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:26:37', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:30:54', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0550ee609581'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0550ee609581 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:26:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,petsc,0550ee609581,5.0,,0.8,,,,,,benchmark7,13.836315870285034 +06df2982a3ff,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/06df2982a3ff'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,691.5198810100555,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.06df2982a3ff.json', u'creation': u'2020-01-11 23:27:13', u'digest': u'9e3a0b8f125ba7f1e177aa71f84db8df9c9d85aa', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7160}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:27:12', u'digest': u'18f7e55d235e3efa6771d726ce92ca1f72a96b95', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2148138}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:14:25', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:27:13', u'digest': u'980730e59b760bc8ba46334b4d1fcb53abc74c2d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:14:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:27:13', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '06df2982a3ff'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/06df2982a3ff +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:14:23,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,trilinos,06df2982a3ff,5.0,,8.0,,,,,,benchmark7,605.0138740539551 +081f81551ae3,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/081f81551ae3'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1071.2732980251312,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.081f81551ae3.json', u'creation': u'2020-01-08 17:37:49', u'digest': u'ac473fe177041e40ff5bf6cd5c1a0a139fa5df96', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10601}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 17:37:48', u'digest': u'17f64a9b374a9b53849e26e7e41d9281e9e48ed0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110793}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 17:18:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 17:37:49', u'digest': u'968832a34e9f265500a63e745efd5e699fc7aea3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 17:18:54', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 17:37:49', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '081f81551ae3'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/081f81551ae3 +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:18:49,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,petsc,081f81551ae3,5.0,,0.8,,,,,,benchmark7,14.009788036346436 +0a595146ae75,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0a595146ae75'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', 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u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0a595146ae75 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 09:57:02,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,8.0,,32.0,4.0,400.0,,,,0a595146ae75,,,0.8,,,,,,benchmark7,20.36813187599182 +0f0ea2da2a8e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/0f0ea2da2a8e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,87.8252420425415,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.0f0ea2da2a8e.json', u'creation': u'2019-12-30 17:50:25', u'digest': u'f145988b9977e27029a93faec0d4c41d525c4db6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6798}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:19', u'digest': u'66be724f37bb38ef2b127cfb2440a1084bfa1c5b', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:21', u'digest': u'bcfd841e06e32d58085095f86a8b6a82ecd1654b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '0f0ea2da2a8e'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/0f0ea2da2a8e +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,trilinos,0f0ea2da2a8e,5.0,,8.0,,,,,,benchmark7,49.35628008842468 +10994e9966db,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/10994e9966db'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,200.61909317970276,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 17:43:38', u'digest': u'036e01c0a8e00313e4dfc3eed01b2adc5b0a543e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 17:40:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 17:43:41', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '10994e9966db'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/10994e9966db +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:40:09,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,petsc,10994e9966db,5.0,,0.8,,,,,,benchmark7,9.853040933609009 +138042d0a138,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/138042d0a138'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': 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None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': 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{u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,74.86352610588074,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.cb462577-0202-4389-b456-11073d632674.json', u'creation': u'2018-02-25 09:51:57', u'digest': u'c980bce3ec1e0a0af726d770be7444bc7d603d06', u'metadata': {u'mimetype': u'application/json', u'size': 76, u'encoding': None}}, {u'path': u'Sumatra.138042d0a138.json', u'creation': u'2018-02-25 09:51:57', u'digest': u'ce262c842c55cdea3c98253efbc34414631a9b52', u'metadata': {u'mimetype': u'application/json', u'size': 13410, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-25 09:51:56', u'digest': u'77b0c370c5b97dc31dd00015b7e2be37a1f9aa31', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110717, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 4\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '138042d0a138'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/138042d0a138 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 09:50:47,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,4.0,,16.0,4.0,400.0,,,,138042d0a138,,,0.8,,,,,,benchmark7,30.062147855758667 +146e1b4493b5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/146e1b4493b5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,90.13976788520813,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.146e1b4493b5.json', u'creation': u'2019-12-30 17:50:26', u'digest': u'0faeb38f6c1330491bf30c00e60b02be92d4cfb0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7316}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:20', u'digest': u'3bde98a0e77d18abb23d49fb9bb3e062a1130f16', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:22', u'digest': u'3219c50155570bae6d34abf160665446ab0c5e62', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:25', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '146e1b4493b5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/146e1b4493b5 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,trilinos,146e1b4493b5,5.0,,8.0,,,,,,benchmark7,47.60377812385559 +15a5e85d89bb,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/15a5e85d89bb'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', 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32\n!!python/unicode 'nthreads': 1\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '15a5e85d89bb'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': 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u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/15a5e85d89bb +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 22:52:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,15a5e85d89bb,5.0,,8.0,,,,,,benchmark7,133.88993096351624 +163dd1af670b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/163dd1af670b'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', 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{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1fd660ceeeb2 +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:49:24,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,1fd660ceeeb2,5.0,,0.8,,,,,,benchmark7,34.77798008918762 +1fed6fdfb121,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/1fed6fdfb121'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,170.75479412078857,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.1fed6fdfb121.json', u'creation': u'2020-01-08 18:03:28', u'digest': u'6870ea47085a6917f13cbf939cb39c58d75220a3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8530}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:03:05', u'digest': u'0bd29527c9b5b291236798eb31159f916c54acd5', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110287}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:00:21', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:03:26', u'digest': u'e203433e91a8a9aede0488c4fd3cea4b61a1afac', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:00:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:03:27', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '1fed6fdfb121'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/1fed6fdfb121 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:00:20,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,1fed6fdfb121,5.0,,0.8,,,,,,benchmark7,21.747786045074463 +2150367655cd,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2150367655cd'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'550cc1ae915c57f3a2187c92389eaa5c8fb22091', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': 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32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '219edd625516'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/219edd625516 +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:04:47,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,trilinos,219edd625516,5.0,,0.8,,,,,,benchmark7,26.516901969909668 +22e95c344147,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/22e95c344147'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,95.44795393943787,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.22e95c344147.json', u'creation': u'2019-12-30 17:51:01', u'digest': u'884eac373e7e8a6502529d7537f45fcd97b3fe59', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6539}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:56', u'digest': u'695819be179a2cd644abdbef60f7a21d3d64dd57', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:49:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:57', u'digest': u'd7fc88155e553ea48d241a61a783eac5621c5d1f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:49:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:51:01', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '22e95c344147'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/22e95c344147 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,trilinos,22e95c344147,5.0,,8.0,,,,,,benchmark7,52.79037404060364 +252bc7f7a4af,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/252bc7f7a4af'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,88.92700719833374,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.252bc7f7a4af.json', u'creation': u'2019-12-30 17:50:25', u'digest': u'7956d7b27d7dec8e705d1b269c5830499964a399', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6539}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:19', u'digest': u'9c5f01768d912532788608faebc4288554ed202b', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:21', u'digest': u'ef9ebaeba80e403143748738af7dad7daabf8742', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:42', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '252bc7f7a4af'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/252bc7f7a4af +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,4.0,4.0,100.0,,explicitDW7a.py,trilinos,252bc7f7a4af,5.0,,8.0,,,,,,benchmark7,53.04701113700867 +2601641bec02,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2601641bec02'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,73.03671789169312,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2601641bec02.json', u'creation': u'2019-12-30 17:46:02', u'digest': u'2a8d4bef00cb196eee56c4e5396cc481ad05723a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8353}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:46:02', u'digest': u'ece7f5f5299ff9dc52bd0cc62168f56f6b0cf5de', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:44:17', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:46:02', u'digest': u'1b99233c5609a1bf2fda7c3e69f188e4049543cf', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:44:18', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:46:02', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '2601641bec02'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2601641bec02 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:44:15,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,16.0,2.0,100.0,,explicitDW7a.py,trilinos,2601641bec02,5.0,,8.0,,,,,,benchmark7,39.55389904975891 +27658f76bb4c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/27658f76bb4c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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'27658f76bb4c'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': 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u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/27658f76bb4c +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:02:41,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,27658f76bb4c,5.0,,0.8,,,,,,benchmark7,7.967358827590942 +27a5c61ce355,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/27a5c61ce355'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,76.28262996673584,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.27a5c61ce355.json', u'creation': u'2020-01-08 19:57:20', u'digest': u'8090123cb8b0b980cbabcdccd4db95f550973224', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8527}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:57:15', u'digest': u'339dd55dd780adac9f5a77f64fccd0ef66d42ff9', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110059}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:55:54', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:57:17', u'digest': u'0ed2bbc87a3ce60818772eae0216b86897d01b78', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:55:56', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:57:20', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '27a5c61ce355'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/27a5c61ce355 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:55:52,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,petsc,27a5c61ce355,5.0,,0.8,,,,,,benchmark7,9.581300020217896 +2977cea142bd,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2977cea142bd'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,79.31044793128967,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2977cea142bd.json', u'creation': u'2020-01-08 18:34:56', u'digest': u'8655b2117e2e3d9bf257d91b4a1337b0ae3b3f20', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6974}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:34:46', u'digest': u'7468dee19cd91cbbe60b6f152d3c806d4578cda8', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108042}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:33:20', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:34:52', u'digest': u'77f9243a94dbc05463ee6fb52f65c9309ea72ada', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:33:22', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:34:55', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '2977cea142bd'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2977cea142bd +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:33:19,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,petsc,2977cea142bd,5.0,,0.8,,,,,,benchmark7,25.190656185150146 +2de4d4b84354,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2de4d4b84354'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,77.26252102851868,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2de4d4b84354.json', u'creation': u'2020-01-08 20:02:39', u'digest': u'e47270ab3509918919773b8e55ac358ac4d03a4b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6974}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:02:38', u'digest': u'225bb89c1f3e0a97c55a504821f6b075aa27c080', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108042}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:00:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:02:38', u'digest': u'18f0999030321792cfc9601e81c047cc70d1ea5d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 59}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:00:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:02:39', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '2de4d4b84354'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2de4d4b84354 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:00:45,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,petsc,2de4d4b84354,5.0,,0.8,,,,,,benchmark7,25.689208984375 +2e57658f0831,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/2e57658f0831'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,75.69778299331665,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.2e57658f0831.json', u'creation': u'2019-12-30 17:47:44', u'digest': u'342353919f33779aa667d443365e22a800c4c8bc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8352}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:47:44', u'digest': u'e1c57a08958f68665b6254c7c984d13e8955ab1e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:47:44', u'digest': u'0611d2b700f55bac15d60347bc3cb1aea83027d6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:47:44', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '2e57658f0831'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/2e57658f0831 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:11,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,100.0,,explicitDW7a.py,trilinos,2e57658f0831,5.0,,8.0,,,,,,benchmark7,46.6368670463562 +32143248c7a6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/32143248c7a6'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,206.66897106170654,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.32143248c7a6.json', u'creation': u'2019-12-30 17:43:15', u'digest': u'5c3b607e7d5c1a048ff92de74788de30b81fbbd8', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6541}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:42:39', u'digest': u'784632aa2a116bbe61d39d160716730216367a19', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:39:26', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:42:54', u'digest': u'7cc9b82fec5c1aa59e84629b90bbce525cf6f2fd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:39:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:43:09', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '32143248c7a6'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/32143248c7a6 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:39:25,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,100.0,,explicitDW7a.py,trilinos,32143248c7a6,5.0,,8.0,,,,,,benchmark7,94.02001690864563 +3288cd86c55d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3288cd86c55d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,151.21439695358276,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.3288cd86c55d.json', u'creation': u'2020-01-08 18:44:17', u'digest': u'd5fe24f8de8a8d9b64d6d8092fb8175042567eb4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8530}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:44:07', u'digest': u'852e9e801ba6461c59e2c3dd646c1d3b4cb31bf9', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110287}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:41:42', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:44:16', u'digest': u'f809eb5c0c9f352c7504e78354abe91a598a311b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:41:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:44:17', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '3288cd86c55d'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3288cd86c55d +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:41:41,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,3288cd86c55d,5.0,,0.8,,,,,,benchmark7,14.589296102523804 +35bf98e057a7,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/35bf98e057a7'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,111.51130294799805,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.35bf98e057a7.json', u'creation': u'2020-01-08 19:40:45', u'digest': u'944ecacadff9cc778febe4e211a61e507eec6dc6', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7494}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:40:39', u'digest': u'130e74046b4e7ba6ac8fe100e44840d49055125d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110406}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:38:38', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:40:43', u'digest': u'a9e3e5e8529fb68e095b414928746b6221940f71', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:38:40', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:40:45', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '35bf98e057a7'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/35bf98e057a7 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:38:36,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,35bf98e057a7,5.0,,0.8,,,,,,benchmark7,15.452471017837524 +394291dd5e65,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/394291dd5e65'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,607.2728490829468,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.394291dd5e65.json', u'creation': u'2020-01-11 23:59:08', u'digest': u'14914b6e2150bcb7ddb5f0220dcb195fa8c27cbd', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7157}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:59:07', u'digest': u'ec13352a6d627fb87fe8e6c2c3077dfe4ba8df96', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2152681}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:48:22', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:59:08', u'digest': u'3e42a7febc6029272514187660d7c59ed9f67ce3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:48:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:59:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '394291dd5e65'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/394291dd5e65 +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:48:22,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,petsc,394291dd5e65,5.0,,8.0,,,,,,benchmark7,514.2404839992523 +3ba128967385,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3ba128967385'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', 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u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, 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u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3ba128967385 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 09:48:47,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,16.0,,16.0,1.0,400.0,,,,3ba128967385,,,0.8,,,,,,benchmark7,16.90142297744751 +3e21bd1b6d27,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/3e21bd1b6d27'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,106.46363592147827,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.3e21bd1b6d27.json', u'creation': u'2020-01-08 18:05:19', u'digest': u'caa401d05a1420f274d03b2c44989da2c3cdc675', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7494}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:05:13', u'digest': u'1932175b71960326184b2294121ec13ec39d283f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110406}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:00:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:05:16', u'digest': u'4e5b3c1c304469d1ed48bc902ca792f66fea6dae', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:00:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:05:18', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '3e21bd1b6d27'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/3e21bd1b6d27 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:00:47,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,3e21bd1b6d27,5.0,,0.8,,,,,,benchmark7,16.53514790534973 +40cd88b1093e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/40cd88b1093e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': 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Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/40cd88b1093e +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. 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u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/439a0454fd49 +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:33:08,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,439a0454fd49,5.0,,0.8,,,,,,benchmark7,14.124489068984985 +495b3723e47d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/495b3723e47d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,193.3841199874878,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.495b3723e47d.json', u'creation': u'2020-01-08 20:10:40', u'digest': u'bfbf515921ac391f5097c969e77de5fe2458ca93', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8530}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:10:08', u'digest': u'620ee650b8a143662a5cc7470f4795003817dd1b', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110287}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:07:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:10:38', u'digest': u'efc6e9bd1db77360f25d5be7a60fb1dc53edf2bc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:07:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:10:40', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '495b3723e47d'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/495b3723e47d +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:07:16,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,495b3723e47d,5.0,,0.8,,,,,,benchmark7,12.002294063568115 +4bdfa2fba4d8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4bdfa2fba4d8'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,80.73479199409485,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4bdfa2fba4d8.json', u'creation': u'2020-01-08 17:43:08', u'digest': u'32b76a699f09335160e3aa26b9a36cc1b51e87eb', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7491}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 17:42:58', u'digest': u'87846922b5c34c37a0a306b681bed134edabe985', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110540}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 17:41:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 17:43:08', u'digest': u'56a43eb3db0a005a461a0f7b9e98dca9f55d9465', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 17:41:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 17:43:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4bdfa2fba4d8'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4bdfa2fba4d8 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:41:12,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,petsc,4bdfa2fba4d8,5.0,,0.8,,,,,,benchmark7,15.746682167053223 +4d9dcc6d34d4,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4d9dcc6d34d4'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, 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u'eta.tar.gz', u'creation': u'2020-01-08 17:45:36', u'digest': u'b400f72d2c7b4db86d62da6700eb016d63908298', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108042}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 17:43:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 17:46:10', u'digest': u'992c850929dfa132064ffa79d201542f8da90c96', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 17:43:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 17:46:13', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4e6159027e0f'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4e6159027e0f +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:43:31,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,petsc,4e6159027e0f,5.0,,0.8,,,,,,benchmark7,24.514525890350342 +4eb8e7731fd2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4eb8e7731fd2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,114.13873600959778,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4eb8e7731fd2.json', u'creation': u'2019-12-30 17:50:57', u'digest': u'eb25118fed2eeb6cf715e47ecc857224f154effc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:40', u'digest': u'ce642488bb2b6175105d919466f62468ac7d8343', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141160}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:44', u'digest': u'a4978853e03fa603ebef3ed1790d5dfe44c7fd88', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:53', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': scipy\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4eb8e7731fd2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4eb8e7731fd2 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,scipy,4eb8e7731fd2,5.0,,8.0,,,,,,benchmark7,50.32379221916199 +4f50b4a87bcc,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4f50b4a87bcc'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,86.44426107406616,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4f50b4a87bcc.json', u'creation': u'2020-01-08 18:07:10', u'digest': u'ff98d951ca075104255905255fcb4e20d2189879', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6718}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:06:56', u'digest': u'2053d74d7b425aaeacb0cd9913a02ff25826c181', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107166}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:05:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:07:09', u'digest': u'eeea1e51e6e62a812f82a3d8271a4702a8465343', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:05:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:07:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4f50b4a87bcc'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4f50b4a87bcc +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:05:33,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,trilinos,4f50b4a87bcc,5.0,,0.8,,,,,,benchmark7,46.67885494232178 +4ff155be284a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/4ff155be284a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,105.76350498199463,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.4ff155be284a.json', u'creation': u'2019-12-30 17:25:52', u'digest': u'53ab9ecb2533f57e5f5c63987f68dcb66ff86d8a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6800}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:25:30', u'digest': u'0f4bde5e7e6102c215a777b92ed3937fb9cadfff', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:23:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:25:32', u'digest': u'83d2d9eabecbb56bfc5c0aebe8473998563e046e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:23:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:25:48', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 32\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '4ff155be284a'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/4ff155be284a +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:23:44,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,64.0,32.0,100.0,,explicitDW7a.py,trilinos,4ff155be284a,5.0,,8.0,,,,,,benchmark7,54.02123498916626 +51559f574c89,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/51559f574c89'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,450.211128950119,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.51559f574c89.json', u'creation': u'2020-01-11 23:06:46', u'digest': u'9024f853d9ffdc6c3c4f6883e220d6ee8e091aca', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8719}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:06:20', u'digest': u'4acd9d46df35a4031fab24b6dacf97dea368c900', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2154027}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:00:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:06:29', u'digest': u'636d1131315595d239e69bcbf7005c34d5fc9729', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:00:24', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:06:41', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '51559f574c89'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/51559f574c89 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:00:21,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,51559f574c89,5.0,,8.0,,,,,,benchmark7,222.70396304130554 +53b0466344b3,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/53b0466344b3'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,354.3548059463501,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.53b0466344b3.json', u'creation': u'2020-01-11 23:33:48', u'digest': u'0b63eec872c90748a7c761ff5db795fce6908a94', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10798}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:33:43', u'digest': u'3d9f84fd2abcb33f702e036a34719525a64e9e59', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2155619}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:27:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:33:45', u'digest': u'd10484d5905f6d102952c97ddfca8ed119d38cf4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:27:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:33:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '53b0466344b3'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/53b0466344b3 +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:27:41,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,petsc,53b0466344b3,5.0,,8.0,,,,,,benchmark7,184.44640016555786 +56b49c87bd97,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/56b49c87bd97'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', 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u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.82a07885-2802-4d25-9ca4-0e44091d7b54.json', u'creation': u'2018-02-26 09:14:51', u'digest': u'6d41321bb274782f44861c7d9cdf5bb09143631a', u'metadata': {u'mimetype': u'application/json', u'size': 75, u'encoding': None}}, {u'path': u'Sumatra.56b49c87bd97.json', u'creation': u'2018-02-26 09:14:51', u'digest': u'ebf1304806a9443dc4e4fd631215168cbe419c77', u'metadata': {u'mimetype': u'application/json', u'size': 13410, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-26 09:14:50', u'digest': u'b812ebd6864b066caa33ce7d545daf4390465268', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110322, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '56b49c87bd97'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/56b49c87bd97 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-26 09:12:11,Jonathan Guyer ,873842924e88d08afc244316a77d9ff25f790845,1.0,0.5,,0.01,,,0.0004,4.0,,16.0,1.0,400.0,,,,56b49c87bd97,,,0.8,,,,,,benchmark7,28.87758994102478 +5956ec91c1f0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5956ec91c1f0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,96.93319892883301,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5956ec91c1f0.json', u'creation': u'2019-12-30 17:48:05', u'digest': u'1a4c1a7def0d1aa3f62663c272fd60c5602b9145', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6541}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:48:00', u'digest': u'749bc9f6cb81d2e8f688cd301aa2e24b336d302d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:48:02', u'digest': u'a0b427f224eb45710ea57a6ba2857804e912de75', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:15', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:48:03', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 16\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5956ec91c1f0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5956ec91c1f0 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:11,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,16.0,16.0,100.0,,explicitDW7a.py,trilinos,5956ec91c1f0,5.0,,8.0,,,,,,benchmark7,64.40597605705261 +5b0a839b6dd0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5b0a839b6dd0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,82.91326594352722,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5b0a839b6dd0.json', u'creation': u'2019-12-30 17:50:19', u'digest': u'f1041f6ad3eecc41289e538e61e7ec297c905fc0', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7313}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:12', u'digest': u'3d08525d041e1a664e0a458d85778123b2d272e9', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141064}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:15', u'digest': u'e7d5d4bcc3ea33e08ab3654f07ffb46ad7aa5e2f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:17', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5b0a839b6dd0'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5b0a839b6dd0 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,4.0,1.0,100.0,,explicitDW7a.py,petsc,5b0a839b6dd0,5.0,,8.0,,,,,,benchmark7,44.98906993865967 +5cfd4b74c68c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5cfd4b74c68c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,131.53659796714783,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5cfd4b74c68c.json', u'creation': u'2020-01-08 20:47:03', u'digest': u'647ef2ab9bff0ec7fbf96c9c1c71cdcdd558ff0f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7494}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:46:55', u'digest': u'6a99a2c26a43a59279eeb85b4537ac01549f5b5c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110406}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:44:40', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:46:58', u'digest': u'91f84fde2acd2d111b448ade9bb6b5b84a32cbf5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:44:42', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:47:00', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5cfd4b74c68c'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5cfd4b74c68c +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:44:39,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,5cfd4b74c68c,5.0,,0.8,,,,,,benchmark7,20.32764983177185 +5d7ac5984009,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5d7ac5984009'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,429.9511208534241,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.5d7ac5984009.json', u'creation': u'2020-01-11 23:55:45', u'digest': u'81af72b404ffb39ec466421612c86570aaeda9f4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7676}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:55:42', u'digest': u'a5817588e9f46087ab5d9cddefd689f16f3178cf', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2154334}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:45:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:55:43', u'digest': u'5cc9c6e91177ed9135cc5d49c74ce5ea92049264', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:45:36', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:55:44', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '5d7ac5984009'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5d7ac5984009 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:45:21,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,petsc,5d7ac5984009,5.0,,8.0,,,,,,benchmark7,331.5138900279999 +5ed69c19b0ea,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5ed69c19b0ea'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5ed69c19b0ea +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,2.0,1.0,100.0,,explicitDW7a.py,trilinos,5ed69c19b0ea,5.0,,8.0,,,,,,benchmark7,45.812642097473145 +5efda66d7d1f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/5efda66d7d1f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/5efda66d7d1f +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:37:33,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,5efda66d7d1f,5.0,,0.8,,,,,,benchmark7,9.959954977035522 +61c431b384a1,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/61c431b384a1'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.61c431b384a1.json', u'creation': u'2019-12-30 17:50:21', u'digest': u'7461b0e6e2a1d218b40670b28c8a1c5604d43770', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6795}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:17', u'digest': u'3292beba756f1622c8846beffa6580b9b785553e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141113}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:19', u'digest': u'9b8e53ec65d74eb4d718e2e7a00fcc9ccf9efd3d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:20', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '61c431b384a1'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', 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Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/61c431b384a1 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,4.0,2.0,100.0,,explicitDW7a.py,petsc,61c431b384a1,5.0,,8.0,,,,,,benchmark7,47.46807909011841 +61d0b890f50b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/61d0b890f50b'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', 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SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': 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u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/638f14242897 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:44:15,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,16.0,1.0,100.0,,explicitDW7a.py,trilinos,638f14242897,5.0,,8.0,,,,,,benchmark7,37.77466320991516 +63ff75f079e7,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/63ff75f079e7'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': 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0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:21', u'digest': u'0bbfa550402df25c4839637f04a2823e0364e8f5', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:42', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 4\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '659bc6b8d8b7'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/659bc6b8d8b7 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,4.0,4.0,100.0,,explicitDW7a.py,petsc,659bc6b8d8b7,5.0,,8.0,,,,,,benchmark7,52.9029598236084 +693d0ba9cd31,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/693d0ba9cd31'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,141.2782678604126,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.693d0ba9cd31.json', u'creation': u'2020-01-08 18:19:28', u'digest': u'238610c711c094c4e710954f0a535e41fafa0ff3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10601}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:19:10', u'digest': u'7057e86817b447c6d868994779f8d87a57a92791', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110793}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:15:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:19:12', u'digest': u'19688f9f58745dc227ef3a36de1e9801be9e001c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:15:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:19:15', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '693d0ba9cd31'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/693d0ba9cd31 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:15:42,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,petsc,693d0ba9cd31,5.0,,0.8,,,,,,benchmark7,48.41524386405945 +698c3b6dfa55,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/698c3b6dfa55'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,83.10050010681152,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.45cd25bc-0d21-46c6-9fa1-a14acae06c6f.json', u'creation': u'2018-02-26 09:14:53', u'digest': u'11b4a7103cafe4f4998c4f83bb7a614ad5a7234d', u'metadata': {u'mimetype': u'application/json', u'size': 75, u'encoding': None}}, {u'path': u'Sumatra.698c3b6dfa55.json', u'creation': u'2018-02-26 09:14:53', u'digest': u'870ee7499b6a22db56b06fddbf30b562752ecd28', u'metadata': {u'mimetype': u'application/json', u'size': 13410, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-26 09:14:51', u'digest': u'211b7c57745e05b434746d153d8736d42bfdabcf', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110415, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 3\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '698c3b6dfa55'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/698c3b6dfa55 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-26 09:12:11,Jonathan Guyer ,873842924e88d08afc244316a77d9ff25f790845,1.0,0.5,,0.01,,,0.0004,4.0,,16.0,3.0,400.0,,,,698c3b6dfa55,,,0.8,,,,,,benchmark7,30.28952693939209 +69e434c387b2,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/69e434c387b2'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,117.39489388465881,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.69e434c387b2.json', u'creation': u'2019-12-30 17:29:52', u'digest': u'21bf37ea47accbc98f2939ce2d6a3b5484bc752b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6541}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:29:44', u'digest': u'3d49e200fcca389577a08b6a98378fd3f25abeca', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:26:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:29:48', u'digest': u'c4a821453d58ef9b4b5c5b22767956ab8cffc9c1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:26:47', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:29:52', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 64\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '69e434c387b2'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/69e434c387b2 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:26:47,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,64.0,64.0,100.0,,explicitDW7a.py,trilinos,69e434c387b2,5.0,,8.0,,,,,,benchmark7,71.54347705841064 +6c2a4c5b4f75,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/6c2a4c5b4f75'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': 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u'size': 2154181}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:14:24', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:23:56', u'digest': u'43b02156c0f62bbe96d539eaed890bea127ed7fc', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:14:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:23:58', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '6c2a4c5b4f75'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/6c2a4c5b4f75 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:14:23,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,petsc,6c2a4c5b4f75,5.0,,8.0,,,,,,benchmark7,146.38664293289185 +7230bd0506c5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7230bd0506c5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,377.34548902511597,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.7230bd0506c5.json', u'creation': u'2019-12-30 17:15:24', u'digest': u'924789275ee852937a14aec955c39b6ab1300165', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8353}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:13:25', u'digest': u'c0a23b6c1e9b78e9985c1386a873a9cd8e95a019', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141196}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:08:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:14:47', u'digest': u'46214ec1bf1b0000ed61530f203c1a2992b86baf', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:08:46', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:15:23', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 8\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '7230bd0506c5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/7230bd0506c5 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:08:42,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,64.0,8.0,100.0,,explicitDW7a.py,trilinos,7230bd0506c5,5.0,,8.0,,,,,,benchmark7,34.07248401641846 +725d0af030ee,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/725d0af030ee'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,154.4354329109192,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 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u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', 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u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/725d0af030ee +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:49:58,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,petsc,725d0af030ee,5.0,,0.8,,,,,,benchmark7,9.244536876678467 +7b06c69e6644,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7b06c69e6644'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,82.29277801513672,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.94b29ff4-f99f-4bb7-9fc8-51e0b8f6482c.json', u'creation': u'2018-02-27 11:00:16', u'digest': u'0b4d0c27503565ef5034c1ba21dc1058f1d350c8', u'metadata': {u'mimetype': u'application/json', u'size': 76, u'encoding': None}}, {u'path': u'Sumatra.7b06c69e6644.json', u'creation': u'2018-02-27 11:00:16', u'digest': u'9284d731149befa13d0dbc258d366eb07509eb79', u'metadata': {u'mimetype': u'application/json', u'size': 15538, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-27 11:00:11', u'digest': u'cebd1b93abaa91dfd724f54343b47e4479e97ddf', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110322, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '7b06c69e6644'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/7b06c69e6644 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-27 10:58:49,Jonathan Guyer ,4aa3861c78179cea41f0bb2ef30bb3738acf67aa,1.0,0.5,,0.01,,,0.0004,4.0,,8.0,1.0,400.0,,,,7b06c69e6644,,,0.8,,,,,,benchmark7,24.106518983840942 +7c22c983bb67,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/7c22c983bb67'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,106.8478012084961,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.7c22c983bb67.json', u'creation': u'2020-01-08 19:32:42', u'digest': u'94273440b4f4b55d249d0f6f9c0bbc129b384a0e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6974}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:32:36', u'digest': u'23aeab5cad53f4f3d37c2c18d350fa09f3edf2e0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108042}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:30:40', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:32:39', u'digest': u'11001c458388aa3f774229aca373e10822cc4dea', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:30:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:32:42', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '7c22c983bb67'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/7c22c983bb67 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:30:40,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,petsc,7c22c983bb67,5.0,,0.8,,,,,,benchmark7,23.890751123428345 +833b95bdff8c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/833b95bdff8c'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', 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u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jupyter_core'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'6.0.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tornado'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/nbformat'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'3.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jsonschema'}, {u'name': u'attr', u'module': u'python', u'source': u'attribute', u'version': u'19.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/attr'}, {u'name': u'pyrsistent', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pyrsistent'}, {u'name': u'importlib_metadata', u'module': u'python', u'source': u'attribute', u'version': u'1.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/importlib_metadata'}, {u'name': u'more_itertools', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/more_itertools'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/nbconvert'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jinja2'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/markupsafe'}, {u'name': u'defusedxml', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/defusedxml'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jupyter_client'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'18.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/zmq'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.8.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/dateutil'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'5.1.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/ipykernel'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'2.0.10', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/prompt_toolkit'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/wcwidth'}, {u'name': u'jedi', u'module': u'python', u'source': u'attribute', u'version': u'0.15.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jedi'}, {u'name': u'parso', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/parso'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'3.1.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/matplotlib'}, {u'name': u'PyQt5', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/PyQt5'}, {u'name': u'backcall', u'module': u'python', u'source': u'attribute', u'version': u'0.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/backcall'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tvtk'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'5.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/traits'}, {u'name': u'traitsui', u'module': u'python', u'source': u'attribute', u'version': u'6.1.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/traitsui'}, {u'name': u'pyface', u'module': u'python', u'source': u'attribute', u'version': u'6.1.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pyface'}, {u'name': u'apptools', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/apptools'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mpi4py'}, {u'name': u'skfmm', u'module': u'python', u'source': u'attribute', u'version': u'2019.1.30', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/skfmm'}, {u'name': u'past', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/past'}, {u'name': u'petsc4py', u'module': u'python', u'source': u'attribute', u'version': u'3.12.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/petsc4py'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.7.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mayavi'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'104823bf610aa9f015882b7ff0df747ea3ce6502', u'diff': u'diff --git a/sumatra/commands.py b/sumatra/commands.py\nindex 4fcac70..de0899b 100644\n--- a/sumatra/commands.py\n+++ b/sumatra/commands.py\n@@ -251,6 +251,7 @@ def configure(argv):\n parser.add_argument(\'-L\', \'--launch_mode\', choices=[\'serial\', \'distributed\', \'slurm-mpi\'], help=""how computations should be launched."")\n parser.add_argument(\'-o\', \'--launch_mode_options\', help=""extra options for the given launch mode, to be given in quotes with a leading space, e.g. \' --foo=3\'"")\n parser.add_argument(\'-P\', \'--pfi_path\', help=""the path to the pfi.py script provided with Sumatra, which should be installed on every node and is used to obtain platform information."")\n+ parser.add_argument(\'-X\', \'--mpirun\', help=""the path to the mpirun or mpiexec executable."")\n parser.add_argument(\'-p\', \'--plain\', dest=\'plain\', action=\'store_true\', help=""pass arguments to the \'run\' command straight through to the program. Otherwise arguments of the form name=value can be used to overwrite default parameter values."")\n parser.add_argument(\'--no-plain\', dest=\'plain\', action=\'store_false\', help=""arguments to the \'run\' command of the form name=value will overwrite default parameter values. This is the opposite of the --plain option."")\n parser.add_argument(\'-s\', \'--store\', help=""Change the record store to the specified path, URL or URI (must be specified). {0}"".format(store_arg_help))\ndiff --git a/sumatra/launch.py b/sumatra/launch.py\nindex af048f8..b862847 100644\n--- a/sumatra/launch.py\n+++ b/sumatra/launch.py\n@@ -277,7 +277,7 @@ class DistributedLaunchMode(LaunchMode):\n maxprocs=self.n)\n platform_information = []\n for rank in range(self.n):\n- platform_information.append(PlatformInformation(**comm.recv(source=rank, tag=rank).values()[0]))\n+ platform_information.append(PlatformInformation(**list(comm.recv(source=rank, tag=rank).values())[0]))\n comm.Disconnect()\n return platform_information\n get_platform_information.__doc__ = LaunchMode.get_platform_information.__doc__ + """"""\ndiff --git a/sumatra/recordstore/datreant_store.py b/sumatra/recordstore/datreant_store.py\nindex 52f4f7b..a8c954d 100644\n--- a/sumatra/recordstore/datreant_store.py\n+++ b/sumatra/recordstore/datreant_store.py\n@@ -11,13 +11,13 @@ import os\n import shutil\n from datetime import datetime\n \n-import datreant.core as dtr\n+import datreant as dtr\n from sumatra.recordstore.base import RecordStore\n from sumatra.formatting import record2dict\n from sumatra.recordstore import serialization\n from ..core import component\n \n-__all__ = [\'DatreantRecordStore\']\n+# __all__ = [\'DatreantRecordStore\']\n \n JSON_PATTERN = ""Sumatra.{}.json""\n DTR_PROTOCOL = ""datreant://""\n@@ -42,7 +42,7 @@ class DatreantRecordStore(RecordStore):\n if datreant_name.startswith(DTR_PROTOCOL):\n datreant_name = datreant_name[len(DTR_PROTOCOL):]\n self._datreant_name = datreant_name\n- self.datreant = dtr.Group(self._datreant_name)\n+ self.datreant = dtr.Treant(self._datreant_name)\n \n def __str__(self):\n return ""Record store using the datreant package (database file=%s)"" % self._datreant_name\n@@ -54,89 +54,89 @@ class DatreantRecordStore(RecordStore):\n self.__init__(**state)\n \n def list_projects(self):\n- return self.datreant.members.names\n+ records = dtr.discover(self.datreant)\n+ projects = list(set(records.categories[\'smt_project\']))\n+ projects.remove(None)\n+\n+ return projects\n \n def has_project(self, project_name):\n- return project_name in self.datreant.members.names\n- \n+ return len(self._records(project_name)) > 0\n+\n def _records(self, project_name):\n- return self.datreant.members[project_name][0].members\n+ records = dtr.discover(self.datreant)\n+ mask = [c == project_name for c in records.categories[\'smt_project\']]\n+ return records[mask]\n \n def save(self, project_name, record):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- else:\n- records = dtr.Group(os.path.join(self._datreant_name,\n- project_name))\n- self.datreant.members.add(records)\n- records = records.members\n-\n- dtrpath = record.datastore.root\n- if not dtrpath.endswith(record.label):\n- # On initialization, record.datastore.root is same\n- # as project.data_store.root.\n- # Afterwards, Record.run() appends record.label to\n- # record.datastore.root\n- dtrpath = os.path.join(dtrpath, record.label)\n- treant = dtr.Treant(treant=dtrpath)\n+ treant = dtr.Treant(treant=self.datreant[record.label])\n+ treant.categories[\'smt_project\'] = project_name\n \n treant.tags = record.tags\n \n jsonpath = treant[JSON_PATTERN.format(record.label)].make().abspath\n with open(jsonpath, \'w\') as f:\n f.write(serialization.encode_record(record))\n- \n- records.add(treant)\n \n def _treants2records(self, treants):\n jsons = treants.glob(JSON_PATTERN.format(""*""))\n return jsons.map(lambda leaf: serialization.decode_record(leaf.read()))\n \n def get(self, project_name, label):\n- return self._treants2records(self._records(project_name)[label])[0]\n+ treant = self.datreant[label]\n+ if treant.exists:\n+ treant = dtr.Treant(treant)\n+ if (not treant.exists\n+ or treant.categories[\'smt_project\'] != project_name):\n+ errstr = ""Record {} is not in project {}"".format(label,\n+ project_name)\n+ raise IndexError(errstr)\n+ return self._treants2records(treant)[0]\n \n def list(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- if tags is not None:\n- # we need a tuple for ""or"" semantics in datreant\n- if not isinstance(tags, tuple):\n- if isinstance(tags, list):\n- tags = tuple(tags)\n- else:\n- tags = (tags,)\n-\n- if len(tags) > 0:\n- # `smt list` passes an empty list to mean all tags\n- # but datreant takes that to mean nothing matches\n- records = records[records.tags[tags]]\n- records = self._treants2records(records)\n- else:\n- records = []\n+ records = self._records(project_name)\n+ if tags is not None:\n+ # we need a tuple for ""or"" semantics in datreant\n+ if not isinstance(tags, tuple):\n+ if isinstance(tags, list):\n+ tags = tuple(tags)\n+ else:\n+ tags = (tags,)\n+\n+ if len(tags) > 0:\n+ # `smt list` passes an empty list to mean all tags\n+ # but datreant takes that to mean nothing matches\n+ records = records[records.tags[tags]]\n+ records = self._treants2records(records)\n+ \n return records\n \n def labels(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- if tags:\n- if not isinstance(tags, (tuple, list)):\n- tags = (tags,)\n- lbls = records[records.tags[tuple(tags)]].names\n- else:\n- lbls = records.names\n+ records = self._records(project_name)\n+ if tags:\n+ if not isinstance(tags, (tuple, list)):\n+ tags = (tags,)\n+ lbls = records[records.tags[tuple(tags)]].names\n else:\n- lbls = []\n+ lbls = records.names\n+\n return lbls\n \n def delete(self, project_name, label):\n- records = self._records(project_name)\n- if label in records.names:\n- self._records(project_name).remove(label)\n- else:\n+ record = self.datreant[label]\n+ if not record.exists:\n # datreant doesn\'t care, but sumatra wants an error\n # for a non-existent label\n raise KeyError\n \n+ record = dtr.Treant(record)\n+ if record.categories[\'smt_project\'] != project_name:\n+ # This will never fail, as we only put one project in the\n+ # Data/ directory, but fail if the project_name is wrong\n+ raise KeyError\n+\n+ shutil.rmtree(record._treantdir)\n+\n def delete_by_tag(self, project_name, tag):\n records = self._records(project_name)\n for_deletion = records[records.tags[tag]].names\n@@ -153,16 +153,6 @@ class DatreantRecordStore(RecordStore):\n most_recent = record.label\n return most_recent\n \n- def clear(self):\n- for project in self.datreant.members:\n- for record in project.members:\n- record._backend.delete()\n- project.members.remove(record)\n- project._backend.delete()\n- self.datreant.members.remove(project)\n- self.datreant._backend.delete()\n- self.datreant = None\n-\n @classmethod\n def accepts_uri(cls, uri):\n return uri.startswith(DTR_PROTOCOL)\n@@ -171,7 +161,6 @@ class DatreantRecordStore(RecordStore):\n """"""\n Copy the database file\n """"""\n- print self._datreant_name\n shutil.copytree(self._datreant_name, self._datreant_name + "".backup"")\n \n def remove(self):', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.19', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/django'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2019.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pytz'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/parameters'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tagging'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.15.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/httplib2'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2019.11.28', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/certifi'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/sympy'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mpmath'}, {u'name': u'gmpy2', u'module': u'python', u'source': u'attribute', u'version': u'2.1.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/gmpy2'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/fastcache'}]",,135.1771605014801,"{u'path': u'/data/guyer/miniconda3/envs/petsc37/bin/python', u'version': u'3.7.6', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.85746094f93b.json', u'creation': u'2019-12-30 14:13:09', u'digest': u'308f66d225e92b475a6a50596f70c85b734b2499', u'metadata': {u'mimetype': u'application/json', u'size': 23233, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 14:13:04', u'digest': u'90b5616fb80900fbeedcc57d75ae2a4e285a48d8', u'metadata': {u'mimetype': u'application/x-tar', u'size': 111916, u'encoding': u'gzip'}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 14:08:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 14:13:05', u'digest': u'db7fe6deaa0c81e785463e25ee44cbd49a8b176f', u'metadata': {u'mimetype': u'application/json', u'size': 61, u'encoding': None}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 14:08:53', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 14:13:09', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'size': 17, u'encoding': None}}]","{u'content': u'Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\nncpus: 1\nnproc: 1\nnslots: 1\nnthreads: 1\nnx: 100\nscript: explicitDW7a.py\nsumatra_label: 85746094f93b\nsweeps: 5\ntotaltime: 8.0\n', u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.93', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'ruth', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/85746094f93b +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 14:08:50,Jonathan Guyer ,deb2da0cb19409a138af3bfaa0e9b41412db703d,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,,85746094f93b,5.0,,8.0,,,,,,benchmark7,85.27743601799011 +86b19f263116,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/86b19f263116'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,97.90167808532715,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.86b19f263116.json', u'creation': u'2019-12-30 17:48:33', u'digest': u'9c710bd85afd0ef9d11faf75656f210de06c381a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6539}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:48:27', u'digest': u'4f384409dc8f438257f41bc22cea1646cc3b6d06', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:48:29', u'digest': u'15f517fbf8b4258e612a315651260e0e31f3741f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:48:32', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 8\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '86b19f263116'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/86b19f263116 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,8.0,8.0,100.0,,explicitDW7a.py,trilinos,86b19f263116,5.0,,8.0,,,,,,benchmark7,60.813827991485596 +87eb38f3bb44,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/87eb38f3bb44'}}","[{u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/yaml'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/datreant'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pathlib2'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/asciitree'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/fuzzywuzzy'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/Levenshtein'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/future'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.17.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/numpy'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/setuptools'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pkg_resources'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.4.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/scipy'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'7.11.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/IPython'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/traitlets'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/ipython_genutils'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/testpath'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pexpect'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/ptyprocess'}, {u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pygments'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'6.0.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/notebook'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jupyter_core'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'6.0.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tornado'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/nbformat'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'3.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jsonschema'}, {u'name': u'attr', u'module': u'python', u'source': u'attribute', u'version': u'19.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/attr'}, {u'name': u'pyrsistent', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pyrsistent'}, {u'name': u'importlib_metadata', u'module': u'python', u'source': u'attribute', u'version': u'1.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/importlib_metadata'}, {u'name': u'more_itertools', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/more_itertools'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/nbconvert'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jinja2'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/markupsafe'}, {u'name': u'defusedxml', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/defusedxml'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jupyter_client'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'18.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/zmq'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.8.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/dateutil'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'5.1.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/ipykernel'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'2.0.10', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/prompt_toolkit'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/wcwidth'}, {u'name': u'jedi', u'module': u'python', u'source': u'attribute', u'version': u'0.15.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/jedi'}, {u'name': u'parso', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/parso'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'3.1.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/matplotlib'}, {u'name': u'PyQt5', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/PyQt5'}, {u'name': u'backcall', u'module': u'python', u'source': u'attribute', u'version': u'0.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/backcall'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tvtk'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'5.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/traits'}, {u'name': u'traitsui', u'module': u'python', u'source': u'attribute', u'version': u'6.1.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/traitsui'}, {u'name': u'pyface', u'module': u'python', u'source': u'attribute', u'version': u'6.1.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/pyface'}, {u'name': u'apptools', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/apptools'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mpi4py'}, {u'name': u'skfmm', u'module': u'python', u'source': u'attribute', u'version': u'2019.1.30', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/skfmm'}, {u'name': u'past', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/past'}, {u'name': u'petsc4py', u'module': u'python', u'source': u'attribute', u'version': u'3.12.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/petsc4py'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.7.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mayavi'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'104823bf610aa9f015882b7ff0df747ea3ce6502', u'diff': u'diff --git a/sumatra/commands.py b/sumatra/commands.py\nindex 4fcac70..de0899b 100644\n--- a/sumatra/commands.py\n+++ b/sumatra/commands.py\n@@ -251,6 +251,7 @@ def configure(argv):\n parser.add_argument(\'-L\', \'--launch_mode\', choices=[\'serial\', \'distributed\', \'slurm-mpi\'], help=""how computations should be launched."")\n parser.add_argument(\'-o\', \'--launch_mode_options\', help=""extra options for the given launch mode, to be given in quotes with a leading space, e.g. \' --foo=3\'"")\n parser.add_argument(\'-P\', \'--pfi_path\', help=""the path to the pfi.py script provided with Sumatra, which should be installed on every node and is used to obtain platform information."")\n+ parser.add_argument(\'-X\', \'--mpirun\', help=""the path to the mpirun or mpiexec executable."")\n parser.add_argument(\'-p\', \'--plain\', dest=\'plain\', action=\'store_true\', help=""pass arguments to the \'run\' command straight through to the program. Otherwise arguments of the form name=value can be used to overwrite default parameter values."")\n parser.add_argument(\'--no-plain\', dest=\'plain\', action=\'store_false\', help=""arguments to the \'run\' command of the form name=value will overwrite default parameter values. This is the opposite of the --plain option."")\n parser.add_argument(\'-s\', \'--store\', help=""Change the record store to the specified path, URL or URI (must be specified). {0}"".format(store_arg_help))\ndiff --git a/sumatra/launch.py b/sumatra/launch.py\nindex af048f8..b862847 100644\n--- a/sumatra/launch.py\n+++ b/sumatra/launch.py\n@@ -277,7 +277,7 @@ class DistributedLaunchMode(LaunchMode):\n maxprocs=self.n)\n platform_information = []\n for rank in range(self.n):\n- platform_information.append(PlatformInformation(**comm.recv(source=rank, tag=rank).values()[0]))\n+ platform_information.append(PlatformInformation(**list(comm.recv(source=rank, tag=rank).values())[0]))\n comm.Disconnect()\n return platform_information\n get_platform_information.__doc__ = LaunchMode.get_platform_information.__doc__ + """"""\ndiff --git a/sumatra/recordstore/datreant_store.py b/sumatra/recordstore/datreant_store.py\nindex 52f4f7b..a8c954d 100644\n--- a/sumatra/recordstore/datreant_store.py\n+++ b/sumatra/recordstore/datreant_store.py\n@@ -11,13 +11,13 @@ import os\n import shutil\n from datetime import datetime\n \n-import datreant.core as dtr\n+import datreant as dtr\n from sumatra.recordstore.base import RecordStore\n from sumatra.formatting import record2dict\n from sumatra.recordstore import serialization\n from ..core import component\n \n-__all__ = [\'DatreantRecordStore\']\n+# __all__ = [\'DatreantRecordStore\']\n \n JSON_PATTERN = ""Sumatra.{}.json""\n DTR_PROTOCOL = ""datreant://""\n@@ -42,7 +42,7 @@ class DatreantRecordStore(RecordStore):\n if datreant_name.startswith(DTR_PROTOCOL):\n datreant_name = datreant_name[len(DTR_PROTOCOL):]\n self._datreant_name = datreant_name\n- self.datreant = dtr.Group(self._datreant_name)\n+ self.datreant = dtr.Treant(self._datreant_name)\n \n def __str__(self):\n return ""Record store using the datreant package (database file=%s)"" % self._datreant_name\n@@ -54,89 +54,89 @@ class DatreantRecordStore(RecordStore):\n self.__init__(**state)\n \n def list_projects(self):\n- return self.datreant.members.names\n+ records = dtr.discover(self.datreant)\n+ projects = list(set(records.categories[\'smt_project\']))\n+ projects.remove(None)\n+\n+ return projects\n \n def has_project(self, project_name):\n- return project_name in self.datreant.members.names\n- \n+ return len(self._records(project_name)) > 0\n+\n def _records(self, project_name):\n- return self.datreant.members[project_name][0].members\n+ records = dtr.discover(self.datreant)\n+ mask = [c == project_name for c in records.categories[\'smt_project\']]\n+ return records[mask]\n \n def save(self, project_name, record):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- else:\n- records = dtr.Group(os.path.join(self._datreant_name,\n- project_name))\n- self.datreant.members.add(records)\n- records = records.members\n-\n- dtrpath = record.datastore.root\n- if not dtrpath.endswith(record.label):\n- # On initialization, record.datastore.root is same\n- # as project.data_store.root.\n- # Afterwards, Record.run() appends record.label to\n- # record.datastore.root\n- dtrpath = os.path.join(dtrpath, record.label)\n- treant = dtr.Treant(treant=dtrpath)\n+ treant = dtr.Treant(treant=self.datreant[record.label])\n+ treant.categories[\'smt_project\'] = project_name\n \n treant.tags = record.tags\n \n jsonpath = treant[JSON_PATTERN.format(record.label)].make().abspath\n with open(jsonpath, \'w\') as f:\n f.write(serialization.encode_record(record))\n- \n- records.add(treant)\n \n def _treants2records(self, treants):\n jsons = treants.glob(JSON_PATTERN.format(""*""))\n return jsons.map(lambda leaf: serialization.decode_record(leaf.read()))\n \n def get(self, project_name, label):\n- return self._treants2records(self._records(project_name)[label])[0]\n+ treant = self.datreant[label]\n+ if treant.exists:\n+ treant = dtr.Treant(treant)\n+ if (not treant.exists\n+ or treant.categories[\'smt_project\'] != project_name):\n+ errstr = ""Record {} is not in project {}"".format(label,\n+ project_name)\n+ raise IndexError(errstr)\n+ return self._treants2records(treant)[0]\n \n def list(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- if tags is not None:\n- # we need a tuple for ""or"" semantics in datreant\n- if not isinstance(tags, tuple):\n- if isinstance(tags, list):\n- tags = tuple(tags)\n- else:\n- tags = (tags,)\n-\n- if len(tags) > 0:\n- # `smt list` passes an empty list to mean all tags\n- # but datreant takes that to mean nothing matches\n- records = records[records.tags[tags]]\n- records = self._treants2records(records)\n- else:\n- records = []\n+ records = self._records(project_name)\n+ if tags is not None:\n+ # we need a tuple for ""or"" semantics in datreant\n+ if not isinstance(tags, tuple):\n+ if isinstance(tags, list):\n+ tags = tuple(tags)\n+ else:\n+ tags = (tags,)\n+\n+ if len(tags) > 0:\n+ # `smt list` passes an empty list to mean all tags\n+ # but datreant takes that to mean nothing matches\n+ records = records[records.tags[tags]]\n+ records = self._treants2records(records)\n+ \n return records\n \n def labels(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- if tags:\n- if not isinstance(tags, (tuple, list)):\n- tags = (tags,)\n- lbls = records[records.tags[tuple(tags)]].names\n- else:\n- lbls = records.names\n+ records = self._records(project_name)\n+ if tags:\n+ if not isinstance(tags, (tuple, list)):\n+ tags = (tags,)\n+ lbls = records[records.tags[tuple(tags)]].names\n else:\n- lbls = []\n+ lbls = records.names\n+\n return lbls\n \n def delete(self, project_name, label):\n- records = self._records(project_name)\n- if label in records.names:\n- self._records(project_name).remove(label)\n- else:\n+ record = self.datreant[label]\n+ if not record.exists:\n # datreant doesn\'t care, but sumatra wants an error\n # for a non-existent label\n raise KeyError\n \n+ record = dtr.Treant(record)\n+ if record.categories[\'smt_project\'] != project_name:\n+ # This will never fail, as we only put one project in the\n+ # Data/ directory, but fail if the project_name is wrong\n+ raise KeyError\n+\n+ shutil.rmtree(record._treantdir)\n+\n def delete_by_tag(self, project_name, tag):\n records = self._records(project_name)\n for_deletion = records[records.tags[tag]].names\n@@ -153,16 +153,6 @@ class DatreantRecordStore(RecordStore):\n most_recent = record.label\n return most_recent\n \n- def clear(self):\n- for project in self.datreant.members:\n- for record in project.members:\n- record._backend.delete()\n- project.members.remove(record)\n- project._backend.delete()\n- self.datreant.members.remove(project)\n- self.datreant._backend.delete()\n- self.datreant = None\n-\n @classmethod\n def accepts_uri(cls, uri):\n return uri.startswith(DTR_PROTOCOL)\n@@ -171,7 +161,6 @@ class DatreantRecordStore(RecordStore):\n """"""\n Copy the database file\n """"""\n- print self._datreant_name\n shutil.copytree(self._datreant_name, self._datreant_name + "".backup"")\n \n def remove(self):', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.19', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/django'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/parameters'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tagging'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.15.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/httplib2'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2019.11.28', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/certifi'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/sympy'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mpmath'}, {u'name': u'gmpy2', u'module': u'python', u'source': u'attribute', u'version': u'2.1.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/gmpy2'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/fastcache'}]",,202.04563164710999,"{u'path': u'/data/guyer/miniconda3/envs/petsc37/bin/python', u'version': u'3.7.6', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.87eb38f3bb44.json', u'creation': u'2019-12-29 17:53:50', u'digest': u'20ac5b16dccff9ce034828e4b6d1253e675af88f', u'metadata': {u'mimetype': u'application/json', u'size': 23059, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-29 17:53:31', u'digest': u'2c317afa4babfe0b498f4cdb1c9113b5bf077862', u'metadata': {u'mimetype': u'application/x-tar', u'size': 111916, u'encoding': u'gzip'}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-29 17:47:21', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-29 17:53:33', u'digest': u'6f3f023bc87a8761af3b1d0c18ad65bd97a60c5b', u'metadata': {u'mimetype': u'application/json', u'size': 61, u'encoding': None}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-29 17:47:22', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-29 17:53:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'size': 17, u'encoding': None}}]","{u'content': u'Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\nncpus: 1\nnproc: 1\nnslots: 1\nnthreads: 1\nnx: 100\nscript: explicitDW7a.py\nsumatra_label: 87eb38f3bb44\nsweeps: 5\ntotaltime: 8.0\n', u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.93', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'ruth', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/87eb38f3bb44 +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-29 17:47:20,Jonathan Guyer ,b0bbe6fecef3f559ee0ea2b1a5b76603eba9e6f1,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,,87eb38f3bb44,5.0,,8.0,,,,,,benchmark7,99.52040433883667 +88c01b40c101,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/88c01b40c101'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,113.39123320579529,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.88c01b40c101.json', u'creation': u'2019-12-30 17:50:57', u'digest': u'ce7d9993ce3c3cbe1003cc41980c3fa30e71bd23', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:44', u'digest': u'bf32e1696f6df1fbc22d3dbd9536cd79e4a90f8d', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141160}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:48', u'digest': u'e6168f0a8b2dbfcf4c2718b75d07402a56203083', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:57', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': scipy\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '88c01b40c101'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/88c01b40c101 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,scipy,88c01b40c101,5.0,,8.0,,,,,,benchmark7,53.76766800880432 +8b274298d192,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8b274298d192'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,124.12747001647949,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8b274298d192.json', u'creation': u'2020-01-08 18:40:10', u'digest': u'69e29155ff55325a25be3fa6962ae232318e82d1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10604}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:39:04', u'digest': u'c587ee0167c49ef5279d06ae9b5345fed81adaf6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110023}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:37:56', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:40:10', u'digest': u'7e728ede1689576f8415e341a6f5543cad16b33e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:37:56', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:40:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8b274298d192'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8b274298d192 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:37:54,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,8b274298d192,5.0,,0.8,,,,,,benchmark7,13.996233940124512 +8b7eb532d7b8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8b7eb532d7b8'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,96.72005891799927,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8b7eb532d7b8.json', u'creation': u'2019-12-30 17:48:32', u'digest': u'70f81754983c489bd337a25f05f46d8662d09786', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8349}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:48:26', u'digest': u'c55d6fe87cf92412454db0c5c7a12846799cf376', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141160}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:48:28', u'digest': u'6044d7597e74974557e5230826558d95b35d594a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:48:30', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8b7eb532d7b8'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8b7eb532d7b8 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,8.0,1.0,100.0,,explicitDW7a.py,petsc,8b7eb532d7b8,5.0,,8.0,,,,,,benchmark7,39.731456995010376 +8ed09d7739dd,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8ed09d7739dd'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,87.66941714286804,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8ed09d7739dd.json', u'creation': u'2019-12-30 17:48:23', u'digest': u'322a660fa8375cbf701136d80fb5b13ad1b71961', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7313}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:48:22', u'digest': u'9928946728af7b19e1dceb3aea366e9df482c2ec', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141064}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:48:22', u'digest': u'3b7fde7ff6dec783b05742330e3956463cc95aac', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:41', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:48:22', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8ed09d7739dd'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8ed09d7739dd +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:41,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,petsc,8ed09d7739dd,5.0,,8.0,,,,,,benchmark7,43.63880801200867 +8f5fb7081ac3,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8f5fb7081ac3'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,268.6825249195099,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.8f5fb7081ac3.json', u'creation': u'2020-01-08 20:53:00', u'digest': u'898287edde5c2ccfbae0561ba6ad70b122c5eeb9', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6977}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:52:18', u'digest': u'5ede5ce7e27fa6f86ed0b2d54f798b082bf36441', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107768}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:48:11', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:52:27', u'digest': u'd18f5e4cb4d0d600af58c027768afbf141e697ed', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:48:13', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:52:54', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '8f5fb7081ac3'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/8f5fb7081ac3 +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:48:09,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,trilinos,8f5fb7081ac3,5.0,,0.8,,,,,,benchmark7,36.424882888793945 +8f9de00a645f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/8f9de00a645f'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': 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u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/9348bde01f0b +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:40:00,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,9348bde01f0b,5.0,,0.8,,,,,,benchmark7,12.821298837661743 +955cfbbc7b19,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/955cfbbc7b19'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,234.4006540775299,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.955cfbbc7b19.json', u'creation': u'2020-01-08 19:30:29', u'digest': u'7e303db1a49da7320277d92509039702d3e75b4a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8527}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:30:27', u'digest': u'1b325a163b89888bf22f254a307f76afddfd6314', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110059}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:26:16', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:30:29', u'digest': u'f6f859e6bdc242a6ca5ea66f082a3757ee473caa', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:26:17', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:30:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '955cfbbc7b19'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/955cfbbc7b19 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:26:15,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,petsc,955cfbbc7b19,5.0,,0.8,,,,,,benchmark7,13.18460488319397 +98dcae194a41,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/98dcae194a41'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/98dcae194a41 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. 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u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/9a76662bc3d7 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:00:51,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,64.0,1.0,64.0,1.0,100.0,,explicitDW7a.py,trilinos,9a76662bc3d7,5.0,,8.0,,,,,,benchmark7,57.92296814918518 +9fd5480610ed,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/9fd5480610ed'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,55.90930414199829,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.9fd5480610ed.json', u'creation': u'2020-01-08 19:38:12', u'digest': u'2564e0fb9f11e6c45d1d60693e07da391bf43dda', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8530}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:38:06', u'digest': u'7e03b114660390bae4ccd4e106e0e2bbc05b6df2', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110287}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:37:03', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:38:10', u'digest': u'01a68ef5aefb3aba6fe122992efb9639404bcdb3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:37:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:38:11', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode '9fd5480610ed'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/9fd5480610ed +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:36:44,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,trilinos,9fd5480610ed,5.0,,0.8,,,,,,benchmark7,14.476492166519165 +a01a26adda37,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a01a26adda37'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': 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u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a047af3fb2e8 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:35:14,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,a047af3fb2e8,5.0,,0.8,,,,,,benchmark7,11.368751049041748 +a13c77a0c7ee,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a13c77a0c7ee'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1189.7784938812256,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a13c77a0c7ee.json', u'creation': u'2020-01-12 09:09:02', u'digest': u'5ed88d7cb922d8fc7482963f37b27d54bc5bde7a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6900}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-12 09:08:46', u'digest': u'fd3b1914327d549fc0c51ab11cd82fafef8a9929', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2152964}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-12 08:48:52', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-12 09:08:52', u'digest': u'7731d5edf4b01305c859901e04b591ba34228e17', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-12 08:48:52', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-12 09:08:59', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a13c77a0c7ee'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a13c77a0c7ee +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-12 08:48:51,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,trilinos,a13c77a0c7ee,5.0,,8.0,,,,,,benchmark7,1099.9789781570435 +a14fa1876f1a,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a14fa1876f1a'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, 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u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a14fa1876f1a +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:16:54,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,petsc,a14fa1876f1a,5.0,,0.8,,,,,,benchmark7,30.59035015106201 +a2a1f81c6301,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a2a1f81c6301'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,45.089571952819824,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a2a1f81c6301.json', u'creation': u'2020-01-08 20:07:08', u'digest': u'8e3d833683fb75a3ab519d08b850fef602710526', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10604}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:07:06', u'digest': u'171d023706b4d85f562dbfdbb09d8877ba9acb8c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110023}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:05:03', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:07:07', u'digest': u'b114f97e4cc593a4c4816f853860680c6921a099', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:05:03', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:07:08', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a2a1f81c6301'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a2a1f81c6301 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:05:02,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,a2a1f81c6301,5.0,,0.8,,,,,,benchmark7,7.717282056808472 +a30e6dac3d98,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a30e6dac3d98'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,76.32424211502075,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a30e6dac3d98.json', u'creation': u'2019-12-30 17:46:29', u'digest': u'4597b7799506616449ada19ff3e3cacb1c1e667e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6799}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:46:27', u'digest': u'26ea66b6db41c7d94c9dedc2a70c9e1809b37334', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141065}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:44:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:46:29', u'digest': u'0d84cc5bb58aaf002a242e57e6bd865c14ea2052', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:44:55', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:46:29', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 8\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a30e6dac3d98'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a30e6dac3d98 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:44:51,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,16.0,8.0,100.0,,explicitDW7a.py,trilinos,a30e6dac3d98,5.0,,8.0,,,,,,benchmark7,44.24979615211487 +a3e826b75e7f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a3e826b75e7f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,85.06336379051208,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a3e826b75e7f.json', u'creation': u'2019-12-30 17:08:13', u'digest': u'565fcda7f140b08b9db8c50f68727a0f6b5367e1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10427}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:08:06', u'digest': u'50bd91569822293a4e17ec8dbc19aa7a5fa75e71', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141223}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:06:25', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:08:08', u'digest': u'e8d068717c8006522dc6fab2e1da0dd8869a49fa', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:06:29', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:08:11', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a3e826b75e7f'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a3e826b75e7f +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:06:23,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,64.0,4.0,100.0,,explicitDW7a.py,trilinos,a3e826b75e7f,5.0,,8.0,,,,,,benchmark7,29.172953844070435 +a4a357d613cb,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a4a357d613cb'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,74.0255491733551,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a4a357d613cb.json', u'creation': u'2020-01-08 19:40:36', u'digest': u'3f4a44d0b49eac4751ec89b2b17a0851596f4321', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6977}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:40:20', u'digest': u'8adf37fe5f60340da99a8a33a0f23389fc04fcb6', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107768}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:39:07', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:40:33', u'digest': u'3b321507eb32879a2efd00a40342f166864b8cee', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:39:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:40:36', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 16\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a4a357d613cb'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a4a357d613cb +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:39:06,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,trilinos,a4a357d613cb,5.0,,0.8,,,,,,benchmark7,27.0648410320282 +a5c8b3d9b3a6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a5c8b3d9b3a6'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,68.79458212852478,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.a5c8b3d9b3a6.json', u'creation': u'2019-12-30 17:49:25', u'digest': u'657a6dbb54ba3169ed8290ddada59bfea4a6f64f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:49:25', u'digest': u'f4f79825c6c03cc82170fbaefdd787682435fca7', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141144}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:49:25', u'digest': u'cc5a647a0fde6e98b87b11fc80727c50a17e1c4f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:49:25', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 8\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'a5c8b3d9b3a6'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a5c8b3d9b3a6 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:47:59,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,8.0,8.0,100.0,,explicitDW7a.py,petsc,a5c8b3d9b3a6,5.0,,8.0,,,,,,benchmark7,45.414206981658936 +a6b662a91cdf,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/a6b662a91cdf'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/a6b662a91cdf +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:44:25,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,32.0,16.0,400.0,,explicitDW7a.py,trilinos,a6b662a91cdf,5.0,,0.8,,,,,,benchmark7,53.57177805900574 +b0f60f6daf42,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b0f60f6daf42'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', 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u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b17e733b970a +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-24 10:04:50,Jonathan Guyer ,1d7b07efa0d9287c7ff41e0cd25328f685ee9e58,1.0,0.5,,0.01,,,0.0004,16.0,,16.0,1.0,400.0,,,,b17e733b970a,,,0.8,,,,,,benchmark7,16.3191819190979 +b1a896a2c1de,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b1a896a2c1de'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', 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u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,92.86403298377991,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b1a896a2c1de.json', u'creation': u'2019-12-30 17:50:37', u'digest': u'61d04b133fc35e88b657504d7a946d3743c68a32', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:33', u'digest': u'4dbb4e058c9ecb240caa1643c1822c93d82538a8', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141144}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:34', u'digest': u'12fe25b0858d16dc0b7993757aaf883498781624', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:37', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b1a896a2c1de'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b1a896a2c1de +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,petsc,b1a896a2c1de,5.0,,8.0,,,,,,benchmark7,51.35917806625366 +b1ecaa2ba720,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b1ecaa2ba720'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,305.0118091106415,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b1ecaa2ba720.json', u'creation': u'2020-01-08 18:28:07', u'digest': u'a429ad01be754e8df45ec0325957f6b5aa831a87', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8527}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:27:15', u'digest': u'ccaf9d941f6f642f029d3e39c197bce1f37f4ec0', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110059}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:19:59', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:28:00', u'digest': u'd23a993c9f821e26d3ac35cc4e3b90505ddb1b85', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:20:06', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:28:07', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b1ecaa2ba720'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b1ecaa2ba720 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:19:54,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,petsc,b1ecaa2ba720,5.0,,0.8,,,,,,benchmark7,18.24641990661621 +b390cdeaae3c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b390cdeaae3c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,50.45280909538269,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b390cdeaae3c.json', u'creation': u'2020-01-08 20:01:53', u'digest': u'd118ce22728b7da6d16ee4f8c6a49d84a9a7d938', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7491}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:01:48', u'digest': u'415200e3591669d4c20105ce3b161b542cf8ae9f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110540}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:00:33', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:01:50', u'digest': u'3ada31c3bd6f86b514a553aa49fcd7df801de662', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:00:34', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:01:53', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b390cdeaae3c'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b390cdeaae3c +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:00:33,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,petsc,b390cdeaae3c,5.0,,0.8,,,,,,benchmark7,14.511740922927856 +b9ccee868586,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/b9ccee868586'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,246.46048188209534,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.b9ccee868586.json', u'creation': u'2020-01-08 20:52:55', u'digest': u'b07313694f502cb36b50aae38993615ae91dd7ae', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6718}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:52:47', u'digest': u'489e04a0d448d98406739fb7b4ceca712c34b9ca', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107166}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:48:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:52:52', u'digest': u'373b7941672da69ee9c1ea81ecdafba825dd34c1', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:48:24', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:52:54', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'b9ccee868586'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/b9ccee868586 +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:48:22,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,trilinos,b9ccee868586,5.0,,0.8,,,,,,benchmark7,57.064770221710205 +bdd6eb9e48d0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/bdd6eb9e48d0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': 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without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/bdd6eb9e48d0 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:04:07,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,64.0,2.0,100.0,,explicitDW7a.py,trilinos,bdd6eb9e48d0,5.0,,8.0,,,,,,benchmark7,31.803282976150513 +be81aa94f3a8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/be81aa94f3a8'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'9da3ef84d8d3464fc8d332623cdfcaf17f020d0d', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,265.7776620388031,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.be81aa94f3a8.json', u'creation': u'2020-01-08 20:37:53', u'digest': u'a5a4cd3afadef5238cfb4c7f6756eba39c175caf', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14748}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:37:49', u'digest': u'329cdfa6fd8125183a2f9eaf7f8120a87f50a7e1', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2109831}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:33:08', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:37:51', u'digest': u'3268542a5393324af7219d86e5ce5a1ef266f478', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:33:09', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:37:53', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'be81aa94f3a8'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/be81aa94f3a8 +","[u'_finished_', u'master', u'r001', u'threading']",2020-01-08 20:33:07,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,be81aa94f3a8,5.0,,0.8,,,,,,benchmark7,12.208377122879028 +c103075afbc8,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c103075afbc8'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,170.77441096305847,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c1cc215516de.json', u'creation': u'2020-01-08 17:58:28', u'digest': u'b5f38fe8d6346e960112a36104076d4dd1aabf8a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10604}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 17:58:24', u'digest': u'e38fa8e4ef59c952726612bde5ee7a729587c82c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110023}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 17:53:20', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 17:58:27', u'digest': u'73ed4bf0710454e2c3d88814dd9bdac64c734724', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 17:53:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 17:58:27', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c1cc215516de'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c1cc215516de +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:53:03,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,c1cc215516de,5.0,,0.8,,,,,,benchmark7,37.014118909835815 +c1dbeb30ef8f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c1dbeb30ef8f'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'e846ab4856e6bf5ad35e196393158f48155c61ea', u'diff': u'diff --git a/sumatra/tee.py b/sumatra/tee.py\nindex 0691b61..a053f85 100644\n--- a/sumatra/tee.py\n+++ b/sumatra/tee.py\n@@ -132,16 +132,17 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n # cmd = quote_command(cmd)\n p = subprocess.Popen(cmd, cwd=cwd, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=(platform.system() == \'Linux\'))\n \n- memcode = ""from memory_profiler import memory_usage;""\n- ""with open(\'.memory_profile\', \'w\') as f: ""\n- "" memory_usage(proc={pid}, interval={interval}, timestamps=True,""\n- "" include_children=True, multiprocess=True, stream=f)""\n- print >>sys.stderr, ""memcode-b:"", memcode\n+ memcode = """"""\n+from memory_profiler import memory_usage\n+with open("".memory_profile"", ""w"") as f: \n+ memory_usage(proc={pid}, interval={interval}, timestamps=True,\n+ include_children=True, multiprocess=True, stream=f)""""""\n+ print(""memcode-b: "" + memcode, file=sys.stderr)\n memcode = memcode.format(pid=p.pid, interval=0.1)\n- print >>sys.stderr, ""memcode-a:"", memcode\n- memcmd = \'python -c ""{code}""\'.format(code=memcode)\n- print >>sys.stderr, ""memcmd:"", memcmd\n- pmem = subprocess.Popen(memcmd, cwd=cwd, close_fds=(platform.system() == \'Linux\'))\n+ print(""memcode-a: "" + memcode, file=sys.stderr)\n+ memcmd = ""python -c \'{code}\'"".format(code=memcode)\n+ print(""memcmd: "" + memcmd, file=sys.stderr)\n+ pmem = subprocess.Popen(memcmd, cwd=cwd, shell=True, close_fds=(platform.system() == \'Linux\'))\n \n if(log_command):\n mylogger(""Running: %s"" % cmd)\n@@ -186,7 +187,7 @@ def system2(cmd, cwd=None, logger=_sentinel, stdout=_sentinel, log_command=_sent\n \n pmem.terminate()\n \n- return(returncode, output, memory)\n+ return(returncode, output)\n \n def system(cmd, cwd=None, logger=None, stdout=None, log_command=_sentinel, timing=_sentinel):\n """""" System does not return a tuple """"""', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,77.83691596984863,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.63e95ad0-b74d-4653-840a-31ee69bd39b4.json', u'creation': u'2018-02-27 10:57:14', u'digest': u'682f0427bb0a958722ee66befde528d9fd126958', u'metadata': {u'mimetype': u'application/json', u'size': 76, u'encoding': None}}, {u'path': u'Sumatra.c1dbeb30ef8f.json', u'creation': u'2018-02-27 10:57:15', u'digest': u'b607f2e92ae18fc995a10fca5eb726a33e20d080', u'metadata': {u'mimetype': u'application/json', u'size': 15538, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-27 10:57:10', u'digest': u'bf5f107abe7f172262cd1de209a7262393b8325c', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110322, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 1\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c1dbeb30ef8f'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c1dbeb30ef8f +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-27 10:55:50,Jonathan Guyer ,4aa3861c78179cea41f0bb2ef30bb3738acf67aa,1.0,0.5,,0.01,,,0.0004,4.0,,8.0,1.0,400.0,,,,c1dbeb30ef8f,,,0.8,,,,,,benchmark7,23.870251893997192 +c2694a49559d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c2694a49559d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,216.185791015625,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c2694a49559d.json', u'creation': u'2020-01-08 19:53:47', u'digest': u'35bb4e5572216c394efaf4138afd860fd8ab5788', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6718}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:53:42', u'digest': u'e91ff28179832de89de85da65ba634f756b55b75', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107166}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:49:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:53:44', u'digest': u'fe8800bf856dd956680f8f0b2451a5cb4b18ce42', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:49:50', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:53:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c2694a49559d'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c2694a49559d +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:49:42,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,trilinos,c2694a49559d,5.0,,0.8,,,,,,benchmark7,46.62035417556763 +c40fe8f5c916,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c40fe8f5c916'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,490.11765480041504,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 8, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.c40fe8f5c916.json', u'creation': u'2020-01-11 23:34:35', u'digest': u'069acff15583ee3aec67ec44fad4896caea09c1d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 8716}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:34:31', u'digest': u'65807183b7b1857880ba22440d571bf9fefe4c02', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2154897}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:28:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:34:35', u'digest': u'dbf34a38bf08b645fa3c682509f523d5ceaa9f2e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:28:02', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:34:35', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 8\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 4\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c40fe8f5c916'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c40fe8f5c916 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:28:00,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,8.0,1.0,32.0,4.0,400.0,,explicitDW7a.py,petsc,c40fe8f5c916,5.0,,8.0,,,,,,benchmark7,223.9612522125244 +c420589cfac7,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c420589cfac7'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, 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u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,82.29873704910278,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.8a684bc0-528d-492e-81d5-2025af9c66a1.json', u'creation': u'2018-02-26 09:14:52', u'digest': u'e008b7c8016fb9f90f5be665f0fd8c3c17b2b21a', u'metadata': {u'mimetype': u'application/json', u'size': 75, u'encoding': None}}, {u'path': u'Sumatra.c420589cfac7.json', u'creation': u'2018-02-26 09:14:52', u'digest': u'd65ce22f3815304323e15ef23c3a8d92e59ff879', u'metadata': {u'mimetype': u'application/json', u'size': 13410, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-26 09:14:51', u'digest': u'd6f2274942b532223bfc974febf8aa561a4462a1', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2110322, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 2\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c420589cfac7'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c420589cfac7 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-26 09:12:11,Jonathan Guyer ,873842924e88d08afc244316a77d9ff25f790845,1.0,0.5,,0.01,,,0.0004,4.0,,16.0,2.0,400.0,,,,c420589cfac7,,,0.8,,,,,,benchmark7,30.15916085243225 +c50386278119,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/c50386278119'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': 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u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'c9322e11c2ba'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/c9322e11c2ba +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:45:22,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,petsc,c9322e11c2ba,5.0,,0.8,,,,,,benchmark7,44.23005390167236 +cb0e5a41f2ed,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/cb0e5a41f2ed'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,141.97910809516907,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.cb0e5a41f2ed.json', u'creation': u'2020-01-08 18:44:17', u'digest': u'2cc19fee34c7316ae6f59afafbb6cbb9f2888bc7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7494}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:43:54', u'digest': u'0f8046671c11227dc1705df38ca06bb3a6f0df4c', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110406}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:41:43', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:44:13', u'digest': u'84d60bcfb7dd190a73a049a930ddcf3573cf5e4b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:41:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:44:16', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'cb0e5a41f2ed'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cb0e5a41f2ed +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:41:42,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,cb0e5a41f2ed,5.0,,0.8,,,,,,benchmark7,21.505637168884277 +cc81b8470df6,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/cc81b8470df6'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': 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Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/cfe4cae35cc1 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,pysparse,cfe4cae35cc1,5.0,,8.0,,,,,,benchmark7,29.69658398628235 +d090fd0994f0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d090fd0994f0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': 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u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d090fd0994f0 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 16:46:29,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,100.0,,explicitDW7a.py,trilinos,d090fd0994f0,5.0,,8.0,,,,,,benchmark7,57.86176896095276 +d34539aa9b5e,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d34539aa9b5e'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,102.87597894668579,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d34539aa9b5e.json', u'creation': u'2019-12-30 17:23:20', u'digest': u'f65c9187cac30fd632ff12c517dd6c5fd39e299e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7318}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:23:18', u'digest': u'cf833b539098e0798cf76e8dafe0c8ba501a2cf4', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:21:05', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:23:19', u'digest': u'3222b4cbb7a8d194c494f6a0f1f4a7295ae27100', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:21:06', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:23:20', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 64\n!!python/unicode 'nthreads': 16\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd34539aa9b5e'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d34539aa9b5e +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:20:49,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,64.0,16.0,100.0,,explicitDW7a.py,trilinos,d34539aa9b5e,5.0,,8.0,,,,,,benchmark7,29.05768585205078 +d359c686fd64,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d359c686fd64'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, 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u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d524a2ea008f +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:32:49,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,trilinos,d524a2ea008f,5.0,,0.8,,,,,,benchmark7,11.636466026306152 +d9f5387c80d5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/d9f5387c80d5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,88.55144906044006,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.d9f5387c80d5.json', u'creation': u'2019-12-30 17:50:31', u'digest': u'00789cbe0bffc9211ab0e9983666a2e4edd08cc4', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:26', u'digest': u'b51c19959c7c8d217afeac11e89c97a0f8591b50', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141144}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:29', u'digest': u'c4fa78bc6497d8a7d315e6d8d632bc0f8a45fcfe', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:30', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 2\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'd9f5387c80d5'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/d9f5387c80d5 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,2.0,2.0,100.0,,explicitDW7a.py,petsc,d9f5387c80d5,5.0,,8.0,,,,,,benchmark7,51.99940490722656 +e0c97f3c084f,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e0c97f3c084f'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,87.03642702102661,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e0c97f3c084f.json', u'creation': u'2019-12-30 17:50:33', u'digest': u'697f97ba952b0179f9e18bf1e87c879b34d91d37', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6536}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:50:29', u'digest': u'43bb128c3d582360cef909262da39c41e6b50539', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141144}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:50:31', u'digest': u'fd2df270c9804eef532bdbab9ca8c65a50511c68', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:50:32', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e0c97f3c084f'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e0c97f3c084f +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,petsc,e0c97f3c084f,5.0,,8.0,,,,,,benchmark7,54.3906569480896 +e1da465d87e9,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e1da465d87e9'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,85.98783016204834,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e1da465d87e9.json', u'creation': u'2020-01-08 20:03:38', u'digest': u'790c26bff3462dc7a568e410c3c8475a66162a3a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6715}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:03:35', u'digest': u'a6805cd17587d44001e20bd51be4e5b658d8c00f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108337}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:02:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:03:38', u'digest': u'99909b47fd21be7ad951a269f816eb1593c3e64c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:02:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:03:38', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e1da465d87e9'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e1da465d87e9 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:02:04,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,petsc,e1da465d87e9,5.0,,0.8,,,,,,benchmark7,46.96727705001831 +e359ec44608b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e359ec44608b'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,75.01199078559875,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e359ec44608b.json', u'creation': u'2019-12-30 17:46:26', u'digest': u'b8ad39d4b5535965fb9c6681b276843ceb785c9f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7317}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:46:24', u'digest': u'7395d4d4caab392bb75fed6acff472e223678828', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:44:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:46:26', u'digest': u'c9d2b44c2a4644276579d0085c9173dcda0e11ba', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:44:53', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:46:26', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e359ec44608b'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e359ec44608b +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:44:51,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,16.0,4.0,100.0,,explicitDW7a.py,trilinos,e359ec44608b,5.0,,8.0,,,,,,benchmark7,39.31506609916687 +e47d283e8c93,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e47d283e8c93'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,294.1077129840851,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e47d283e8c93.json', u'creation': u'2020-01-11 22:59:20', u'digest': u'13866d446e8eacca927c82b8c78d87be18555ac8', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10801}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 22:59:19', u'digest': u'969c182ff9096a4afd5f440a1889fbb7b7709e6a', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2153927}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 22:52:35', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 22:59:20', u'digest': u'a183f64623d085fdc26bc677c3503394b5973a3f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 22:52:36', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 22:59:20', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e47d283e8c93'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e47d283e8c93 +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 22:52:32,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,trilinos,e47d283e8c93,5.0,,8.0,,,,,,benchmark7,173.2888629436493 +e54503595c3b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e54503595c3b'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,142.41003108024597,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 32, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.e54503595c3b.json', u'creation': u'2020-01-08 18:19:28', u'digest': u'76398c19927eda7f3556cd52e27f503bd54552ac', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 14745}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 18:19:10', u'digest': u'868d3d0169b536dceed23f6dc0cc262028000655', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110203}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 18:15:44', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 18:19:12', u'digest': u'e698561c3323901a1f19d78ce69c4c4dc1b14a84', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 18:15:45', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 18:19:14', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 32\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 1\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e54503595c3b'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e54503595c3b +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:15:42,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,petsc,e54503595c3b,5.0,,0.8,,,,,,benchmark7,55.50558400154114 +e8bc81a75d3b,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/e8bc81a75d3b'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': 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u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyQt4'}, {u'name': u'traits', u'module': u'python', u'source': u'attribute', u'version': u'4.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traits'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'jsonschema', u'module': u'python', u'source': u'attribute', u'version': u'2.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jsonschema'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/copyreg'}, {u'name': u'dateutil', u'module': u'python', u'source': u'attribute', u'version': u'2.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/dateutil'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_thread'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/fastcache'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/backports'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'0.19', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpmath'}, {u'name': u'nbconvert', u'module': u'python', u'source': u'attribute', u'version': u'5.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbconvert'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'http', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/http'}, {u'name': u'mpl_toolkits', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpl_toolkits'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/traitlets'}, {u'name': u'tornado', u'module': u'python', u'source': u'attribute', u'version': u'4.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tornado'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/enum'}, {u'name': u'mayavi', u'module': u'python', u'source': u'attribute', u'version': u'4.5.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mayavi'}, {u'name': u'matplotlib', u'module': u'python', u'source': u'attribute', u'version': u'2.0.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/matplotlib'}, {u'name': u'notebook', u'module': u'python', u'source': u'attribute', u'version': u'5.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/notebook'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'654426c7d472712b628af057ec493d55b9812fbf', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'nbformat', u'module': u'python', u'source': u'attribute', u'version': u'4.4.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/nbformat'}, {u'name': u'tkinter', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tkinter'}, {u'name': u'jupyter_client', u'module': u'python', u'source': u'attribute', u'version': u'5.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_client'}, {u'name': u'wcwidth', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/wcwidth'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/django'}, {u'name': u'queue', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/queue'}, {u'name': u'pytz', u'module': u'python', u'source': u'attribute', u'version': u'2017.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pytz'}]",,73.50815296173096,"{u'path': u'/data/guyer/miniconda2/envs/fipy/bin/python', u'version': u'2.7.14', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc27/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda2/envs/fipy/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Treant.96667c1b-942a-4c45-b4f9-534410ea1b74.json', u'creation': u'2018-02-25 10:04:11', u'digest': u'e0b413067d3836a85e32da753aab3b0b992e0f44', u'metadata': {u'mimetype': u'application/json', u'size': 76, u'encoding': None}}, {u'path': u'Sumatra.e8bc81a75d3b.json', u'creation': u'2018-02-25 10:04:11', u'digest': u'8dd19a4cc6088cc53e113106a4fca07a67b098f3', u'metadata': {u'mimetype': u'application/json', u'size': 12688, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-25 10:04:09', u'digest': u'ff41931e6ca8a53521d83554bdc695f5a9a12382', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2108194, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'e8bc81a75d3b'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/e8bc81a75d3b +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-25 10:03:01,Jonathan Guyer ,6664e63d4bf3a7daaa2dac2c5a2946a7ab32111e,1.0,0.5,,0.01,,,0.0004,1.0,,32.0,32.0,400.0,,,,e8bc81a75d3b,,,0.8,,,,,,benchmark7,34.560786962509155 +ea23a0c41a22,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ea23a0c41a22'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,393.3719370365143,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ea23a0c41a22.json', u'creation': u'2020-01-08 18:30:43', u'digest': u'18d857eca6a7c730aae8da943cc966bbb697b6c7', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7491}}, {u'path': 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u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ea23a0c41a22'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', 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Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ea23a0c41a22 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 18:23:49,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,petsc,ea23a0c41a22,5.0,,0.8,,,,,,benchmark7,37.704062938690186 +eb403c359ba5,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/eb403c359ba5'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/eb403c359ba5 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:16:54,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,petsc,eb403c359ba5,5.0,,0.8,,,,,,benchmark7,34.753355979919434 +eb405e77fd58,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/eb405e77fd58'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': 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u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tagging'}, {u'name': u'zmq', u'module': u'python', u'source': u'attribute', u'version': u'16.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/zmq'}, {u'name': u'pysparse', u'module': u'python', u'source': u'attribute', u'version': u'1.3-dev', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pysparse'}, {u'name': u'tvtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/tvtk'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.16.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/future'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'38.5.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/setuptools'}, {u'name': u'prompt_toolkit', u'module': u'python', u'source': u'attribute', u'version': u'1.0.15', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/prompt_toolkit'}, {u'name': u'mpi4py', u'module': u'python', u'source': u'attribute', u'version': u'3.0.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/mpi4py'}, {u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/reprlib'}, {u'name': u'socketserver', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/socketserver'}, {u'name': u'PyQt4', u'module': u'python', 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u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mayavi'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'104823bf610aa9f015882b7ff0df747ea3ce6502', u'diff': u'diff --git a/sumatra/commands.py b/sumatra/commands.py\nindex 4fcac70..de0899b 100644\n--- a/sumatra/commands.py\n+++ b/sumatra/commands.py\n@@ -251,6 +251,7 @@ def configure(argv):\n parser.add_argument(\'-L\', \'--launch_mode\', choices=[\'serial\', \'distributed\', \'slurm-mpi\'], help=""how computations should be launched."")\n parser.add_argument(\'-o\', \'--launch_mode_options\', help=""extra options for the given launch mode, to be given in quotes with a leading space, e.g. \' --foo=3\'"")\n parser.add_argument(\'-P\', \'--pfi_path\', help=""the path to the pfi.py script provided with Sumatra, which should be installed on every node and is used to obtain platform information."")\n+ parser.add_argument(\'-X\', \'--mpirun\', help=""the path to the mpirun or mpiexec executable."")\n parser.add_argument(\'-p\', \'--plain\', dest=\'plain\', action=\'store_true\', help=""pass arguments to the \'run\' command straight through to the program. Otherwise arguments of the form name=value can be used to overwrite default parameter values."")\n parser.add_argument(\'--no-plain\', dest=\'plain\', action=\'store_false\', help=""arguments to the \'run\' command of the form name=value will overwrite default parameter values. This is the opposite of the --plain option."")\n parser.add_argument(\'-s\', \'--store\', help=""Change the record store to the specified path, URL or URI (must be specified). {0}"".format(store_arg_help))\ndiff --git a/sumatra/launch.py b/sumatra/launch.py\nindex af048f8..b862847 100644\n--- a/sumatra/launch.py\n+++ b/sumatra/launch.py\n@@ -277,7 +277,7 @@ class DistributedLaunchMode(LaunchMode):\n maxprocs=self.n)\n platform_information = []\n for rank in range(self.n):\n- platform_information.append(PlatformInformation(**comm.recv(source=rank, tag=rank).values()[0]))\n+ platform_information.append(PlatformInformation(**list(comm.recv(source=rank, tag=rank).values())[0]))\n comm.Disconnect()\n return platform_information\n get_platform_information.__doc__ = LaunchMode.get_platform_information.__doc__ + """"""\ndiff --git a/sumatra/recordstore/datreant_store.py b/sumatra/recordstore/datreant_store.py\nindex 52f4f7b..08f5505 100644\n--- a/sumatra/recordstore/datreant_store.py\n+++ b/sumatra/recordstore/datreant_store.py\n@@ -11,7 +11,7 @@ import os\n import shutil\n from datetime import datetime\n \n-import datreant.core as dtr\n+import datreant as dtr\n from sumatra.recordstore.base import RecordStore\n from sumatra.formatting import record2dict\n from sumatra.recordstore import serialization\n@@ -42,7 +42,7 @@ class DatreantRecordStore(RecordStore):\n if datreant_name.startswith(DTR_PROTOCOL):\n datreant_name = datreant_name[len(DTR_PROTOCOL):]\n self._datreant_name = datreant_name\n- self.datreant = dtr.Group(self._datreant_name)\n+ self.datreant = dtr.Treant(self._datreant_name)\n \n def __str__(self):\n return ""Record store using the datreant package (database file=%s)"" % self._datreant_name\n@@ -54,50 +54,45 @@ class DatreantRecordStore(RecordStore):\n self.__init__(**state)\n \n def list_projects(self):\n- return self.datreant.members.names\n+ return self.datreant.tags.names\n \n def has_project(self, project_name):\n- return project_name in self.datreant.members.names\n- \n- def _records(self, project_name):\n- return self.datreant.members[project_name][0].members\n+ return project_name in self._records\n+\n+ @property\n+ def _records(self):\n+ records = dtr.discover(self.datreant)\n+ return records.categories.groupby(\'smt_project\')\n \n def save(self, project_name, record):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n- else:\n- records = dtr.Group(os.path.join(self._datreant_name,\n- project_name))\n- self.datreant.members.add(records)\n- records = records.members\n-\n- dtrpath = record.datastore.root\n- if not dtrpath.endswith(record.label):\n- # On initialization, record.datastore.root is same\n- # as project.data_store.root.\n- # Afterwards, Record.run() appends record.label to\n- # record.datastore.root\n- dtrpath = os.path.join(dtrpath, record.label)\n- treant = dtr.Treant(treant=dtrpath)\n+ treant = dtr.Treant(treant=self.datreant[record.label])\n+ treant.categories[\'smt_project\'] = project_name\n \n treant.tags = record.tags\n \n jsonpath = treant[JSON_PATTERN.format(record.label)].make().abspath\n with open(jsonpath, \'w\') as f:\n f.write(serialization.encode_record(record))\n- \n- records.add(treant)\n \n def _treants2records(self, treants):\n jsons = treants.glob(JSON_PATTERN.format(""*""))\n return jsons.map(lambda leaf: serialization.decode_record(leaf.read()))\n \n def get(self, project_name, label):\n- return self._treants2records(self._records(project_name)[label])[0]\n+ treant = self.datreant[label]\n+ if treant.exists:\n+ treant = dtr.Treant(treant)\n+ if (not treant.exists\n+ or treant.categories[\'smt_project\'] != project_name):\n+ errstr = ""Record {} is not in project {}"".format(label,\n+ project_name)\n+ raise IndexError(errstr)\n+ return self._treants2records(treant)[0]\n \n def list(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n+ records = self._records\n+ if project_name in records:\n+ records = records[project_name]\n if tags is not None:\n # we need a tuple for ""or"" semantics in datreant\n if not isinstance(tags, tuple):\n@@ -116,8 +111,9 @@ class DatreantRecordStore(RecordStore):\n return records\n \n def labels(self, project_name, tags=None):\n- if self.has_project(project_name):\n- records = self._records(project_name)\n+ records = self._records\n+ if project_name in self._records:\n+ records = records[project_name]\n if tags:\n if not isinstance(tags, (tuple, list)):\n tags = (tags,)\n@@ -129,16 +125,22 @@ class DatreantRecordStore(RecordStore):\n return lbls\n \n def delete(self, project_name, label):\n- records = self._records(project_name)\n- if label in records.names:\n- self._records(project_name).remove(label)\n- else:\n+ record = self.datreant[label]\n+ if not record.exists:\n # datreant doesn\'t care, but sumatra wants an error\n # for a non-existent label\n raise KeyError\n \n+ record = dtr.Treant(record)\n+ if record.categories[\'smt_project\'] != project_name:\n+ # This will never fail, as we only put one project in the\n+ # Data/ directory, but fail if the project_name is wrong\n+ raise KeyError\n+\n+ shutil.rmtree(record._treantdir)\n+\n def delete_by_tag(self, project_name, tag):\n- records = self._records(project_name)\n+ records = self._records[project_name]\n for_deletion = records[records.tags[tag]].names\n for record in for_deletion:\n self.delete(project_name, record)\n@@ -147,22 +149,12 @@ class DatreantRecordStore(RecordStore):\n def most_recent(self, project_name):\n most_recent = None\n most_recent_timestamp = datetime.min\n- for record in self._treants2records(self._records(project_name)):\n+ for record in self._treants2records(self._records[project_name]):\n if record.timestamp > most_recent_timestamp:\n most_recent_timestamp = record.timestamp\n most_recent = record.label\n return most_recent\n \n- def clear(self):\n- for project in self.datreant.members:\n- for record in project.members:\n- record._backend.delete()\n- project.members.remove(record)\n- project._backend.delete()\n- self.datreant.members.remove(project)\n- self.datreant._backend.delete()\n- self.datreant = None\n-\n @classmethod\n def accepts_uri(cls, uri):\n return uri.startswith(DTR_PROTOCOL)\n@@ -171,7 +163,6 @@ class DatreantRecordStore(RecordStore):\n """"""\n Copy the database file\n """"""\n- print self._datreant_name\n shutil.copytree(self._datreant_name, self._datreant_name + "".backup"")\n \n def remove(self):', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'django', u'module': u'python', u'source': u'attribute', u'version': u'1.8.19', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/django'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/parameters'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/tagging'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.15.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/httplib2'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2019.11.28', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/certifi'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/sympy'}, {u'name': u'mpmath', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/mpmath'}, {u'name': u'gmpy2', u'module': u'python', u'source': u'attribute', u'version': u'2.1.0b1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/gmpy2'}, {u'name': u'fastcache', u'module': u'python', u'source': u'attribute', u'version': u'1.1.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc37/lib/python3.7/site-packages/fastcache'}]",,136.02337217330933,"{u'path': u'/data/guyer/miniconda3/envs/petsc37/bin/python', u'version': u'3.7.6', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ec12ea7be2fb.json', u'creation': u'2019-12-29 08:45:16', u'digest': u'd72364737ebff95e608780ef472d8b11c8097f13', u'metadata': {u'mimetype': u'application/json', u'size': 22065, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-29 08:45:11', u'digest': u'5d9c612afe8be6a773ba8146dfc0faffa0692962', u'metadata': {u'mimetype': u'application/x-tar', u'size': 111916, u'encoding': u'gzip'}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-29 08:40:19', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-29 08:45:11', u'digest': u'660ed30b71fa7d943031a40e10bb6c48651ca316', u'metadata': {u'mimetype': u'application/json', u'size': 61, u'encoding': None}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-29 08:40:22', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'size': 0, u'encoding': None}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-29 08:45:15', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'size': 17, u'encoding': None}}]","{u'content': u'Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\nncpus: 1\nnproc: 1\nnslots: 1\nnthreads: 1\nnx: 100\nscript: explicitDW7a.py\nsumatra_label: ec12ea7be2fb\nsweeps: 5\ntotaltime: 8.0\n', u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'129.6.153.93', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'ruth', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ec12ea7be2fb +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-29 08:40:19,Jonathan Guyer ,b0bbe6fecef3f559ee0ea2b1a5b76603eba9e6f1,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,,ec12ea7be2fb,5.0,,8.0,,,,,,benchmark7,84.99616146087646 +ee96c361c377,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ee96c361c377'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,180.11061096191406,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.ee96c361c377.json', u'creation': u'2019-12-30 17:34:15', u'digest': u'7fd78e5ebd2e824feccd23e56d3090c68d16c45e', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7317}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:33:41', u'digest': u'1782876a6e3471b65d64d91f576441e2a7fb0cc1', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:31:01', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:34:08', u'digest': u'ed1cd3b403b4113c7a778d3b0df8a040fa630a3a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:31:04', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:34:14', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ee96c361c377'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ee96c361c377 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:31:00,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,100.0,,explicitDW7a.py,trilinos,ee96c361c377,5.0,,8.0,,,,,,benchmark7,31.601016998291016 +ef0e1ed46c05,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/ef0e1ed46c05'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/certifi'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.11.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/winreg'}, {u'name': u'jupyter_core', u'module': u'python', u'source': u'attribute', u'version': u'4.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jupyter_core'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.3.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/testpath'}, {u'name': u'markupsafe', u'module': u'python', u'source': u'attribute', u'version': u'1.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/markupsafe'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'0.19.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/scipy'}, {u'name': u'jinja2', u'module': u'python', u'source': u'attribute', u'version': u'2.9.6', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/jinja2'}, {u'name': u'httplib2', u'module': u'python', u'source': u'attribute', u'version': u'0.10.3', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/httplib2'}, {u'name': u'functools32', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/functools32'}, {u'name': u'PyTrilinos', u'module': u'python', u'source': u'attribute', u'version': u'12.8', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/PyTrilinos'}, {u'name': u'tagging', u'module': u'python', u'source': u'attribute', u'version': u'0.4.6', u'diff': u'', 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u'metadata': {u'mimetype': u'application/json', u'size': 74, u'encoding': None}}, {u'path': u'Sumatra.ef0e1ed46c05.json', u'creation': u'2018-02-24 10:08:08', u'digest': u'ce7ff271fd6d258fe253948c966f276fb9210581', u'metadata': {u'mimetype': u'application/json', u'size': 12517, u'encoding': None}}, {u'path': u'eta.tar.gz', u'creation': u'2018-02-24 10:08:06', u'digest': u'e34f18f4426f59418139390ff48151899f0809ad', u'metadata': {u'mimetype': u'application/x-tar', u'size': 2108201, u'encoding': u'gzip'}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\n!!python/unicode 'nslots': 16\n!!python/unicode 'nthreads': 16\nnx: 400\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'ef0e1ed46c05'\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.25', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'ELF', u'version': u'#1 SMP Debian 3.2.96-3', u'release': u'3.2.0-5-amd64', u'network_name': u'r025', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/ef0e1ed46c05 +","[u'_finished_', u'benchmark7a', u'master', u'threading']",2018-02-24 10:07:02,Jonathan Guyer ,1d7b07efa0d9287c7ff41e0cd25328f685ee9e58,1.0,0.5,,0.01,,,0.0004,1.0,,16.0,16.0,400.0,,,,ef0e1ed46c05,,,0.8,,,,,,benchmark7,31.4394109249115 +f0377b167ec0,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f0377b167ec0'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,102.97880911827087,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f0377b167ec0.json', u'creation': u'2020-01-08 19:35:11', u'digest': u'b00625c7fc553f81a092a3c24a11e10c8bd9452d', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6715}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:34:34', u'digest': u'eaacbd3079b44fba7b498e77926cd36351ce657e', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2108337}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:32:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:34:43', u'digest': u'28a86612759c197249f512954f8dffadb8aef84b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:32:30', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:35:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f0377b167ec0'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f0377b167ec0 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:32:30,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,petsc,f0377b167ec0,5.0,,0.8,,,,,,benchmark7,38.26891207695007 +f06c5dc44a96,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f06c5dc44a96'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,52.52850890159607,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f06c5dc44a96.json', u'creation': u'2020-01-08 20:10:34', u'digest': u'eb6f06e05fcf89414ee96f3a8de7b729278f1aa2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7494}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:10:30', u'digest': u'2feadb994304a9d22ae743d12b2e678ca147355f', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110406}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:09:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:10:34', u'digest': u'64ea65f1f6acdd22bd57a1d3f2f74a329a9bb254', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:09:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:10:34', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f06c5dc44a96'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f06c5dc44a96 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:09:31,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,f06c5dc44a96,5.0,,0.8,,,,,,benchmark7,15.089112043380737 +f2755ae8f058,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f2755ae8f058'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,67.0094530582428,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 2, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f2755ae8f058.json', u'creation': u'2019-12-30 17:49:24', u'digest': u'efb0bb123b38af3415f05b36408ef20a62a2cc7c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6795}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:49:23', u'digest': u'918875f4f2ef6436917dd0c169f911f9217bee52', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141113}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:49:23', u'digest': u'5043fcdd9f362b89ab4d80588e326438226a814c', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:00', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:49:24', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 2\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 4\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f2755ae8f058'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f2755ae8f058 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:47:59,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,2.0,1.0,8.0,4.0,100.0,,explicitDW7a.py,petsc,f2755ae8f058,5.0,,8.0,,,,,,benchmark7,41.157942056655884 +f2a35b82162d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f2a35b82162d'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,100.51452302932739,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f3d128179f42.json', u'creation': u'2019-12-30 17:51:02', u'digest': u'5f155840011050597efecbcb77c62b80022078fa', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6539}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:51:00', u'digest': u'f6a526129b134e0d94ae4884d9e267aecebb9612', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141178}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:51:01', u'digest': u'bb54a076355753b801ba4cc04355e49761a694c3', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:48:48', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:51:01', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 1\n!!python/unicode 'nthreads': 1\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f3d128179f42'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f3d128179f42 +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:48:48,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,1.0,1.0,100.0,,explicitDW7a.py,trilinos,f3d128179f42,5.0,,8.0,,,,,,benchmark7,47.31528615951538 +f50521f8f61c,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f50521f8f61c'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,98.33232188224792,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 1, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f50521f8f61c.json', u'creation': u'2020-01-08 20:12:49', u'digest': u'ee96be81735dc5e5646738d5fa2ed6c40da1004a', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 6718}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 20:12:41', u'digest': u'47561f4bfc5e46fe54b033782d5a7421abf1d640', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2107166}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 20:10:51', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 20:12:44', u'digest': u'9c98e4169988abce1b20706748f8c0fd21b1797b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 20:10:55', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 20:12:47', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 1\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 32\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f50521f8f61c'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f50521f8f61c +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 20:10:50,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,1.0,1.0,32.0,32.0,400.0,,explicitDW7a.py,trilinos,f50521f8f61c,5.0,,0.8,,,,,,benchmark7,51.348366022109985 +f555eea664f9,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f555eea664f9'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,101.05476093292236,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f555eea664f9.json', u'creation': u'2020-01-08 19:56:11', u'digest': u'40cb8b54e193af12d5531e0969e4bcc060546f18', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10601}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-08 19:56:04', u'digest': u'b3a7645588b7ed7be411ff56d8247c6c82090210', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2110793}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-08 19:54:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-08 19:56:07', u'digest': u'bee285c0db1cc18f8f2cdbe5513ec631260830ac', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 60}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-08 19:54:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-08 19:56:10', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': petsc\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f555eea664f9'\nsweeps: 5\ntotaltime: 0.8\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f555eea664f9 +","[u'_finished_', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 19:54:30,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,400.0,,explicitDW7a.py,petsc,f555eea664f9,5.0,,0.8,,,,,,benchmark7,11.7293860912323 +f7a3ead24a87,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f7a3ead24a87'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'testpath', u'module': u'python', u'source': u'attribute', u'version': u'0.4.4', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/testpath'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,421.04409885406494,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.f7a3ead24a87.json', u'creation': u'2020-01-11 23:07:42', u'digest': u'96234502c99c0bba3f988b235f32bdcc4ce11af9', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7679}}, {u'path': u'eta.tar.gz', u'creation': u'2020-01-11 23:07:38', u'digest': u'4f337ccc19a9f136c8367a32bd95f11f873fa584', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 2153079}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2020-01-11 23:00:22', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2020-01-11 23:07:41', u'digest': u'414c5b95f0f319c4f4306add8056cd05fbf0b36b', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2020-01-11 23:00:23', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2020-01-11 23:07:42', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 8\nnx: 400\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'f7a3ead24a87'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.49', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u2 (2019-11-11)', u'release': u'4.9.0-11-amd64', u'network_name': u'r049', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f7a3ead24a87 +","[u'_finished_', u'r049', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-11 23:00:21,Jonathan Guyer ,17ec99d547d2c7d90cece873c2347b7c837eadf7,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,32.0,8.0,400.0,,explicitDW7a.py,trilinos,f7a3ead24a87,5.0,,8.0,,,,,,benchmark7,354.1477680206299 +f7abf4b55759,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/f7abf4b55759'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', 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u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': 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u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'psutil', u'module': u'python', u'source': u'attribute', u'version': u'5.6.7', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/psutil'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'44.0.0.post20200102', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,1096.3945620059967,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': 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u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', 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u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', 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u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/f7abf4b55759 +","[u'_finished_', u'mprof', u'r001', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2020-01-08 17:18:48,Jonathan Guyer ,312cc205caa3e50e4e401faea3b03a7c60ee0fae,1.0,0.5,1.e0,0.01,,,0.0004,32.0,1.0,32.0,1.0,400.0,,explicitDW7a.py,petsc,f7abf4b55759,5.0,,0.8,,,,,,benchmark7,11.975404024124146 +fc12311f9efb,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/fc12311f9efb'}}","[{u'name': u'pygments', u'module': u'python', u'source': u'attribute', u'version': u'2.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pygments'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.5.2', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.3.0', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/IPython'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/pexpect'}, {u'name': u'ipykernel', u'module': u'python', u'source': u'attribute', u'version': u'4.6.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/ipykernel'}, {u'name': u'parameters', u'module': u'python', u'source': u'attribute', u'version': u'0.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/parameters'}, {u'name': u'vtk', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/vtk'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'3.12', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/yaml'}, {u'name': u'sumatra', u'module': u'python', u'source': u'/data/guyer/sumatra', u'version': u'9d41e9e3a09d54633de295b981cb4ba36960691f', u'diff': u'', u'path': u'/data/guyer/sumatra/sumatra'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/html'}, {u'name': u'sympy', u'module': u'python', u'source': u'attribute', u'version': u'1.1.1', u'diff': u'', u'path': u'/data/guyer/miniconda2/envs/fipy/lib/python2.7/site-packages/sympy'}, {u'name': u'certifi', u'module': u'python', u'source': u'attribute', u'version': u'2018.01.18', u'diff': u'', u'path': 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u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 16, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.fe7dbcaffe95.json', u'creation': u'2019-12-30 17:00:28', u'digest': u'9c91ce1d47b971979ea7b7250eac9d13cf7da566', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 10427}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:00:27', u'digest': u'163ab6f7d9a29b3bf1f5fc8090bdb3ea331146cd', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141223}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 16:46:31', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:00:28', u'digest': u'aa43a98951cb087fdcdba1461cff3b780ea44d05', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 62}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 16:46:32', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:00:28', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 16\nnproc: 1\n!!python/unicode 'nslots': 32\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'fe7dbcaffe95'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/fe7dbcaffe95 +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 16:46:29,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,16.0,1.0,32.0,2.0,100.0,,explicitDW7a.py,trilinos,fe7dbcaffe95,5.0,,8.0,,,,,,benchmark7,57.957016944885254 +feed9e66610d,"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/data/guyer/CHiMaDPhaseFieldVI/Data/feed9e66610d'}}","[{u'name': u'reprlib', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/reprlib'}, {u'name': u'IPython', u'module': u'python', u'source': u'attribute', u'version': u'5.8.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/IPython'}, {u'name': u'ptyprocess', u'module': u'python', u'source': u'attribute', u'version': u'0.6.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ptyprocess'}, {u'name': u'copyreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/copyreg'}, {u'name': u'_dummy_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_dummy_thread'}, {u'name': u'fuzzywuzzy', u'module': u'python', u'source': u'attribute', u'version': u'0.17.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/fuzzywuzzy'}, {u'name': u'_thread', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/_thread'}, {u'name': u'backports', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/backports'}, {u'name': u'yaml', u'module': u'python', u'source': u'attribute', u'version': u'5.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/yaml'}, {u'name': u'future', u'module': u'python', u'source': u'attribute', u'version': u'0.18.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/future'}, {u'name': u'asciitree', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/asciitree'}, {u'name': u'ipython_genutils', u'module': u'python', u'source': u'attribute', u'version': u'0.2.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/ipython_genutils'}, {u'name': u'numpy', u'module': u'python', u'source': u'attribute', u'version': u'1.16.5', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/numpy'}, {u'name': u'winreg', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/winreg'}, {u'name': u'pathlib2', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pathlib2'}, {u'name': u'datreant', u'module': u'python', u'source': u'attribute', u'version': u'1.0.2', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/datreant'}, {u'name': u'enum', u'module': u'python', u'source': u'attribute', u'version': u'1.1.6', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/enum'}, {u'name': u'scipy', u'module': u'python', u'source': u'attribute', u'version': u'1.2.1', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/scipy'}, {u'name': u'pexpect', u'module': u'python', u'source': u'attribute', u'version': u'4.7.0', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pexpect'}, {u'name': u'builtins', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/builtins'}, {u'name': u'fipy', u'module': u'python', u'source': u'/data/guyer/fipy', u'version': u'57484d6377273ee3ee0368f9d549dd7d07e83417', u'diff': u'', u'path': u'/data/guyer/fipy/fipy'}, {u'name': u'pkg_resources', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/pkg_resources'}, {u'name': u'Levenshtein', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/Levenshtein'}, {u'name': u'traitlets', u'module': u'python', u'source': u'attribute', u'version': u'4.3.3', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/traitlets'}, {u'name': u'setuptools', u'module': u'python', u'source': u'attribute', u'version': u'42.0.2.post20191201', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/setuptools'}, {u'name': u'html', u'module': u'python', u'source': None, u'version': u'unknown', u'diff': u'', u'path': u'/data/guyer/miniconda3/envs/petsc27/lib/python2.7/site-packages/html'}]",,77.42651796340942,"{u'path': u'/data/guyer/miniconda3/envs/petsc27/bin/python', u'version': u'2.7.15', u'name': u'Python', u'options': u''}",[],"{u'type': u'FileSystemDataStore', u'parameters': {u'root': u'/'}}","{u'type': u'DistributedLaunchMode', u'parameters': {u'mpirun': u'/data/guyer/miniconda3/envs/petsc37/bin/mpiexec', u'n': 4, u'hosts': [], u'working_directory': u'/data/guyer/CHiMaDPhaseFieldVI', u'pfi_path': u'/data/guyer/miniconda3/envs/petsc37/bin/pfi.py', u'options': None}}",threadtest.py,,"[{u'path': u'Sumatra.feed9e66610d.json', u'creation': u'2019-12-30 17:47:45', u'digest': u'6b9977174ab53c836be6fe75a76775b93a465e5f', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 7316}}, {u'path': u'eta.tar.gz', u'creation': u'2019-12-30 17:47:44', u'digest': u'e200a07d7b91013da80ce4ab3395a548d6197aa9', u'metadata': {u'mimetype': u'application/x-tar', u'encoding': u'gzip', u'size': 141030}}, {u'path': u'.datreant/.categories.json.proxy', u'creation': u'2019-12-30 17:46:12', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/categories.json', u'creation': u'2019-12-30 17:47:45', u'digest': u'35d5ae460b9ad5dfb5b26e14dc29a171688f01e2', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 61}}, {u'path': u'.datreant/.tags.json.proxy', u'creation': u'2019-12-30 17:46:14', u'digest': u'da39a3ee5e6b4b0d3255bfef95601890afd80709', u'metadata': {u'mimetype': None, u'encoding': None, u'size': 0}}, {u'path': u'.datreant/tags.json', u'creation': u'2019-12-30 17:47:45', u'digest': u'd0df873a7696a2e64b7ec709e12fe534bd620665', u'metadata': {u'mimetype': u'application/json', u'encoding': None, u'size': 17}}]","{u'content': u""Lx: 1.0\nLy: 0.5\ncheckpoint: 1.e0\ndt: 0.01\nkappa: 0.0004\n!!python/unicode 'ncpus': 4\nnproc: 1\n!!python/unicode 'nslots': 8\n!!python/unicode 'nthreads': 2\nnx: 100\nscript: explicitDW7a.py\n!!python/unicode 'solver': trilinos\n!!python/unicode 'sumatra_label': !!python/object/new:future.types.newstr.newstr\n- !!python/unicode 'feed9e66610d'\nsweeps: 5\ntotaltime: 8.0\n"", u'type': u'YAMLParameterSet'}","[{u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}, {u'system_name': u'Linux', u'ip_addr': u'192.168.0.1', u'architecture_bits': u'64bit', u'machine': u'x86_64', u'architecture_linkage': u'', u'version': u'#1 SMP Debian 4.9.189-3+deb9u1 (2019-09-20)', u'release': u'4.9.0-11-amd64', u'network_name': u'r001', u'processor': u''}]",,,"{u'url': u'/data/guyer/CHiMaDPhaseFieldVI', u'type': u'GitRepository', u'upstream': u'git@github.com:guyer/CHiMaDPhaseFieldVI.git'}",,"threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +threadtest.py:17: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + params = yaml.load(f) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +/data/guyer/sumatra/sumatra/parameters.py:156: YAMLLoadWarning: calling yaml.load() without Loader=... is deprecated, as the default Loader is unsafe. Please read https://msg.pyyaml.org/load for full details. + self.values = yaml.load(initialiser) +storing results in /data/guyer/CHiMaDPhaseFieldVI/Data/feed9e66610d +","[u'_finished_', u'threading', u'ticket644-Add_support_for_PETSc_solvers']",2019-12-30 17:46:11,Jonathan Guyer ,026c266e7f74cef8f0023cc58c7638cacc5543b4,1.0,0.5,1.e0,0.01,,,0.0004,4.0,1.0,8.0,2.0,100.0,,explicitDW7a.py,trilinos,feed9e66610d,5.0,,8.0,,,,,,benchmark7,49.05613303184509 diff --git a/examples/cahnHilliard/sphere.py b/examples/cahnHilliard/sphere.py index 234b61c9b9..aaaa0c35ec 100755 --- a/examples/cahnHilliard/sphere.py +++ b/examples/cahnHilliard/sphere.py @@ -34,7 +34,7 @@ ... ... // create entire inner and outer shell ... Surface Loop(100)={1,t1[0],t2[0],t3[0],t7[0],t4[0],t5[0],t6[0]}; -... ''', order=2).extrude(extrudeFunc=lambda r: 1.1 * r) # doctest: +GMSH +... ''', overlap=2).extrude(extrudeFunc=lambda r: 1.1 * r) # doctest: +GMSH >>> phi = CellVariable(name=r"$\phi$", mesh=mesh) # doctest: +GMSH We start the problem with random fluctuations about diff --git a/examples/diffusion/nthOrder/input4thOrder1D.py b/examples/diffusion/nthOrder/input4thOrder1D.py index 50b5e58a01..0ee9b3704a 100755 --- a/examples/diffusion/nthOrder/input4thOrder1D.py +++ b/examples/diffusion/nthOrder/input4thOrder1D.py @@ -56,13 +56,17 @@ >>> eq = DiffusionTerm(coeff=(1, 1)) == 0 -and use the :class:`~fipy.solvers.pysparse.linearLUSolver.LinearLUSolver` for stability. +>>> import fipy.solvers.solver +>>> if fipy.solvers.solver == 'petsc': +... solver = GeneralSolver(precon='lu') +... else: +... solver = GeneralSolver() We perform one implicit timestep to achieve steady state >>> eq.solve(var=var, ... boundaryConditions=BCs, -... solver=GeneralSolver()) +... solver=solver) The analytical solution is: diff --git a/examples/diffusion/steadyState/mesh20x20/modifiedMeshInput.py b/examples/diffusion/steadyState/mesh20x20/modifiedMeshInput.py index 4927ca976c..7c9420aed6 100755 --- a/examples/diffusion/steadyState/mesh20x20/modifiedMeshInput.py +++ b/examples/diffusion/steadyState/mesh20x20/modifiedMeshInput.py @@ -61,19 +61,14 @@ >>> if __name__ == '__main__': ... viewer = Viewer(vars=var) ... viewer.plot() -... +... ... errorViewer = Viewer(vars=errorVar) ... errorViewer.plot() ... ... NOViewer = Viewer(vars=NonOrthoVar) ... NOViewer.plot() -... -... raw_input("finished") - -Note that this test case will only work if you run it by running the -main FiPy test suite. If you run it directly from the directory it is -in it will not be able to find the mesh file. - +... +... input("finished") """ from __future__ import unicode_literals diff --git a/examples/parallel.py b/examples/parallel.py index 42a807d9e7..6b0a7144b8 100644 --- a/examples/parallel.py +++ b/examples/parallel.py @@ -1,24 +1,72 @@ from __future__ import print_function from __future__ import unicode_literals -from mpi4py import MPI -m4comm = MPI.COMM_WORLD -mpi4py_info = "mpi4py: processor %d of %d" % (m4comm.Get_rank(), - m4comm.Get_size()) +from fipy import parallelComm -from PyTrilinos import Epetra +titles = [] +results = [] -epcomm = Epetra.PyComm() +titles.append("mpi4py") -trilinos_info = "PyTrilinos: processor %d of %d" % (epcomm.MyPID(), - epcomm.NumProc()) +try: + from mpi4py import MPI -from fipy import parallelComm, Grid1D + m4comm = MPI.COMM_WORLD + results.append("processor %d of %d" % (m4comm.Get_rank(), + m4comm.Get_size())) -mesh = Grid1D(nx=10) +except Exception as e: + results.append(str(e)) -fipy_info = "FiPy: %d cells on processor %d of %d" % (mesh.numberOfCells, - parallelComm.procID, - parallelComm.Nproc) + + +titles.append("PyTrilinos") + +try: + from PyTrilinos import Epetra -print(" :: ".join((mpi4py_info, trilinos_info, fipy_info))) + epcomm = Epetra.PyComm() + + results.append("processor %d of %d" % (epcomm.MyPID(), + epcomm.NumProc())) +except Exception as e: + results.append(str(e)) + + +titles.append("petsc4py") + +try: + from petsc4py import PETSc + + pecomm = PETSc.COMM_WORLD + + results.append("processor %d of %d" % (pecomm.rank, + pecomm.size)) +except Exception as e: + results.append(str(e)) + + +titles.append("FiPy") + +try: + from fipy import Grid1D + + mesh = Grid1D(nx=10) + + results.append("%d cells on processor %d of %d" % (mesh.numberOfCells, + parallelComm.procID, + parallelComm.Nproc)) +except Exception as e: + results.append(str(e)) + + + +lengths = [parallelComm.MaxAll(len(s)) for s in results] +formats = ["{{{0}:^{1}}}".format(i, l) for i, l in enumerate(lengths)] + +if parallelComm.procID == 0: + print(" ".join(formats).format(*titles)) + +parallelComm.Barrier() + +print(" :: ".join(formats).format(*results)) diff --git a/fipy/matrices/petscMatrix.py b/fipy/matrices/petscMatrix.py new file mode 100644 index 0000000000..0a2568040c --- /dev/null +++ b/fipy/matrices/petscMatrix.py @@ -0,0 +1,807 @@ +from __future__ import division +from builtins import zip +from builtins import range +__docformat__ = 'restructuredtext' + +__all__ = [] + +from petsc4py import PETSc + +from fipy.tools import numerix +from fipy.matrices.sparseMatrix import _SparseMatrix + +class _PETScMatrix(_SparseMatrix): + + def __init__(self, matrix): + """Creates a wrapper for a PETSc matrix + + Allows basic python operations __add__, __sub__ etc. + Facilitate matrix populating in an easy way. + + :Parameters: + - `matrix`: The starting `PETSc.Mat` + """ + self.matrix = matrix + + def getCoupledClass(self): + return _CoupledPETScMeshMatrix + + def copy(self): + return _PETScMatrix(matrix=self.matrix.copy()) + + def __getitem__(self, index): + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + m = self.matrix[index] + if numerix.shape(m) == (): + return m + else: + return _PETScMatrix(matrix=m) + + def __str__(self): + self.matrix.assemble() + + return _SparseMatrix.__str__(self) + + def __iadd__(self, other): + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + if other != 0: + other.matrix.assemblyBegin() + other.matrix.assemblyEnd() + self.matrix = self.matrix + other.matrix + return self + + def __add__(self, other): + """ + Add two sparse matrices + + >>> L = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=3) + >>> L.put([3.,10.,numerix.pi,2.5], [0,0,1,2], [2,1,1,0]) + >>> print(L + _PETScIdentityMatrix(size=3)) + 1.000000 10.000000 3.000000 + --- 4.141593 --- + 2.500000 --- 1.000000 + + >>> print(L + 0) + --- 10.000000 3.000000 + --- 3.141593 --- + 2.500000 --- --- + + >>> print(L + 3) + Traceback (most recent call last): + ... + AttributeError: 'int' object has no attribute 'matrix' + """ + + if other == 0: + return self + else: + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + other.matrix.assemblyBegin() + other.matrix.assemblyEnd() + return _PETScMatrix(matrix=self.matrix + other.matrix) + + __radd__ = __add__ + + def __sub__(self, other): + + if other == 0: + return self + else: + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + other.matrix.assemblyBegin() + other.matrix.assemblyEnd() + return _PETScMatrix(matrix=self.matrix - other.matrix) + + def __rsub__(self, other): + return -self + other + + def __isub__(self, other): + if other != 0: + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + other.matrix.assemblyBegin() + other.matrix.assemblyEnd() + self.matrix = self.matrix - other.matrix + return self + + def __mul__(self, other): + """ + Multiply a sparse matrix by another sparse matrix + + >>> L1 = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=2) + >>> L1.put([3.,10.,numerix.pi,2.5], [0,0,1,2], [2,1,1,0]) + >>> L2 = _PETScIdentityMatrix(size=3, bandwidth=3) + >>> L2.put([4.38], [2], [1]) + >>> L2.put([4.38,12357.2,1.1], [2,1,0], [1,0,2]) + + >>> tmp = numerix.array(((1.23572000e+05, 2.31400000e+01, 3.00000000e+00), + ... (3.88212887e+04, 3.14159265e+00, 0.00000000e+00), + ... (2.50000000e+00, 0.00000000e+00, 2.75000000e+00))) + + >>> numerix.allclose((L1 * L2).numpyArray, tmp) + 1 + + or a sparse matrix by a vector + + >>> tmp = numerix.array((29., 6.28318531, 2.5)) + >>> numerix.allclose(L1 * numerix.array((1,2,3),'d'), tmp) + 1 + + or a vector by a sparse matrix + + >>> tmp = numerix.array((7.5, 16.28318531, 3.)) + >>> numerix.allclose(numerix.array((1,2,3),'d') * L1, tmp) ## The multiplication is broken. Numpy is calling __rmul__ for every element instead of with the whole array. + 1 + + + """ + N = self._shape[1] + + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + + if isinstance(other, _PETScMatrix): + other.matrix.assemblyBegin() + other.matrix.assemblyEnd() + copy = self.copy() + copy.matrix = self.matrix.matMult(other.matrix) + return copy + elif isinstance(other, PETSc.Vec): + y = other.duplicate() + self.matrix.mult(other, y) + return y + else: + shape = numerix.shape(other) + if shape == (): + result = self.copy() + result.matrix = self.matrix * other + return result + elif shape == (N,): + y = PETSc.Vec().createWithArray(other, comm=self.matrix.comm) + result = y.duplicate() + self.matrix.mult(y, result) + return result + else: + raise TypeError + + def __rmul__(self, other): + if type(numerix.ones(1, 'l')) == type(other): + N = self._shape[1] + x = PETSc.Vec().createMPI(N, comm=self.matrix.comm) + y = x.duplicate() + x[:] = other + self.matrix.multTranspose(x, y) + return numerix.asarray(y) + else: + return self * other + + @property + def _shape(self): + return self.matrix.sizes[0][0], self.matrix.sizes[1][1] + + @property + def _range(self): + return list(range(self._shape[1])), list(range(self._shape[0])) + + def put(self, vector, id1, id2): + """ + Put elements of `vector` at positions of the matrix corresponding to (`id1`, `id2`) + + >>> L = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=2) + >>> L.put([3.,10.,numerix.pi,2.5], [0,0,1,2], [2,1,1,0]) + >>> print(L) + --- 10.000000 3.000000 + --- 3.141593 --- + 2.500000 --- --- + """ + self.matrix.setValuesCSR(*self._ijv2csr(id2, id1, vector)) + + def _ijv2csr(self, i, j, v): + """Convert arrays of matrix indices and values into CSR format + + see: http://netlib.org/linalg/html_templates/node91.html#SECTION00931100000000000000 + + .. note:: + petsc4py only understands CSR formatted matrices (setValuesCSR and + setValuesIJV both inexplicably call the same underlying routine). + + Parameters + ---------- + i : array_like + column indices + j : array_like + row indices + v : array_like + non-zero values + + Returns + ------- + row_ptr : array_like + locations in the val vector that start a row, + terminated with len(val) + 1 + cols : array_like + column indices + val : array_like + non-zero values + """ +# from fipy.tools.debug import PRINT +# PRINT("i:", i) +# PRINT("j:", j) +# PRINT("v:", v) + + i = numerix.asarray(i) + j = numerix.asarray(j) + v = numerix.asarray(v) + start_row, end_row = self.matrix.getOwnershipRange() +# PRINT("start_row:", start_row) +# PRINT("end_row:", end_row) + + ix = numerix.lexsort([i, j]) + ix = ix[(j[ix] >= start_row) & (j[ix] < end_row)] + cols = i[ix] + row_ptr = numerix.searchsorted(j[ix], +# numerix.arange(0, self._shape[1]+1)) + numerix.arange(start_row, end_row + 1)) + vals = v[ix] + +# PRINT("i[ix]:", i[ix]) +# PRINT("j[ix]:", j[ix]) +# PRINT("v[ix]:", v[ix]) + + + +# PRINT("size:", self._shape) +# PRINT("shape:", self._shape[0]) +# +# PRINT("row_ptr:", row_ptr) +# PRINT("cols:", cols) +# PRINT("vals:", vals) +# +# PRINT("size:", self.matrix.sizes) +# PRINT("owns-rows:", self.matrix.getOwnershipRange()) +# PRINT("owns-cols:", self.matrix.getOwnershipRangesColumn()) + + # note: PETSc (at least via pip) only seems to handle 32 bit addressing + return row_ptr.astype('int32'), cols.astype('int32'), vals + + def putDiagonal(self, vector): + """ + Put elements of `vector` along diagonal of matrix + + >>> L = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=1) + >>> L.putDiagonal([3.,10.,numerix.pi]) + >>> print(L) + 3.000000 --- --- + --- 10.000000 --- + --- --- 3.141593 + >>> L.putDiagonal([10.,3.]) + >>> print(L) + 10.000000 --- --- + --- 3.000000 --- + --- --- 3.141593 + """ + if type(vector) in [type(1), type(1.)]: + ids = numerix.arange(self._shape[0]) + tmp = numerix.zeros((self._shape[0],), 'd') + tmp[:] = vector + self.put(tmp, ids, ids) + else: + ids = numerix.arange(len(vector)) + self.put(vector, ids, ids) + + def take(self, id1, id2): + # FIXME: This is a terrible implementation + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + vector = [self.matrix[i, j] for i, j in zip(id1, id2)] + vector = numerix.array(vector, 'd') + return vector + + def takeDiagonal(self): + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + + return self.matrix.getDiagonal().array + + def addAt(self, vector, id1, id2): + """ + Add elements of `vector` to the positions in the matrix corresponding to (`id1`,`id2`) + + >>> L = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=3) + >>> L.put([3.,10.,numerix.pi,2.5], [0,0,1,2], [2,1,1,0]) + >>> L.addAt([1.73,2.2,8.4,3.9,1.23], [1,2,0,0,1], [2,2,0,0,2]) + >>> print(L) + 12.300000 10.000000 3.000000 + --- 3.141593 2.960000 + 2.500000 --- 2.200000 + """ + self.matrix.setValuesCSR(*self._ijv2csr(id2, id1, vector), + addv=True) + + def addAtDiagonal(self, vector): + if type(vector) in [type(1), type(1.)]: + ids = numerix.arange(self._shape[0]) + tmp = numerix.zeros((self._shape[0],), 'd') + tmp[:] = vector + self.addAt(tmp, ids, ids) + else: + ids = numerix.arange(len(vector)) + self.addAt(vector, ids, ids) + + def _petsc2app(self, ids): + return ids + + @property + def _scipy_csr(self): + """Return the PETSc-ordered CSR matrix + """ + from scipy import sparse + mpi4pycomm = self.matrix.comm.tompi4py() + + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + + indptr, indices, data = self.matrix.getValuesCSR() + + # getValuesCSR() returns entries local to node + # with node-relative indptr. + # sparse.csr_matrix() requires all elements for construction + # and global indptr + + offset = numerix.cumsum([0] + mpi4pycomm.allgather(len(data))) + offset = mpi4pycomm.scatter(offset[:-1]) + + indices = numerix.concatenate(mpi4pycomm.allgather(indices)) + data = numerix.concatenate(mpi4pycomm.allgather(data)) + + # strip local end markers and append global end marker + indptr = mpi4pycomm.allgather(indptr[:-1] + offset) + [[len(data)]] + indptr = numerix.concatenate(indptr) + + (rows, globalRows), (cols, globalCols) = self.matrix.getSizes() + + return sparse.csr_matrix((data, indices, indptr), + shape=(globalRows, globalCols)) + + @property + def _scipy_coo(self): + """Return the application-ordered COO matrix + """ + from scipy import sparse + + coo = self._scipy_csr.tocoo() + return sparse.coo_matrix((coo.data, + (self._petsc2app(coo.row), + self._petsc2app(coo.col))), + shape=coo.shape) + + @property + def numpyArray(self): + # self.matrix.getDenseArray() raises + # [0] MatDenseGetArray() line 1782 in .../src/mat/impls/dense/seq/dense.c + # [0] No support for this operation for this object type + # [0] Cannot locate function MatDenseGetArray_C in object + return self._scipy_coo.toarray() + + def matvec(self, x): + """This method is required for scipy solvers. + """ + return self * x + + def exportMmf(self, filename): + """Exports the matrix to a Matrix Market file of the given `filename`. + """ + from scipy.io import mmio + + mmio.mmwrite(filename, self._scipy_coo) + +class _PETScMatrixFromShape(_PETScMatrix): + + def __init__(self, rows, cols, bandwidth=0, sizeHint=None, matrix=None, comm=PETSc.COMM_SELF): + """Instantiates and wraps a PETSc `Mat` matrix + + :Parameters: + - `rows`: The number of matrix rows + - `cols`: The number of matrix columns + - `bandwidth`: The proposed band width of the matrix. + - `sizeHint`: estimate of the number of non-zeros + - `matrix`: pre-assembled `ll_mat` to use for storage + - `comm`: communicator + + """ + bandwidth = bandwidth + if (bandwidth == 0) and (sizeHint is not None): + bandwidth = sizeHint // max(rows, cols) + if matrix is None: + matrix = PETSc.Mat() + matrix.create(comm) + # rows are owned per process + # cols are owned by everyone + matrix.setSizes([[rows, None], [cols, None]]) + matrix.setType('aij') # sparse + matrix.setPreallocationNNZ(None) # FIXME: ??? #bandwidth) + + _PETScMatrix.__init__(self, matrix=matrix) + +class _PETScMeshMatrix(_PETScMatrixFromShape): + def __init__(self, mesh, bandwidth=0, sizeHint=None, matrix=None, numberOfVariables=1, numberOfEquations=1): + + """Creates a `_PETScMatrixFromShape` associated with a `Mesh`. Allows for different number of equations and/or variables + + :Parameters: + - `mesh`: The `Mesh` to assemble the matrix for. + - `bandwidth`: The proposed band width of the matrix. + - `sizeHint`: estimate of the number of non-zeros + - `matrix`: pre-assembled `ll_mat` to use for storage + - `numberOfVariables`: The columns of the matrix is determined by `numberOfVariables * self.mesh.numberOfCells`. + - `numberOfEquations`: The rows of the matrix is determined by `numberOfEquations * self.mesh.numberOfCells`. + """ + self.mesh = mesh + self.numberOfVariables = numberOfVariables + self.numberOfEquations = numberOfEquations + + _PETScMatrixFromShape.__init__(self, + rows=numberOfEquations * len(self.mesh._localNonOverlappingCellIDs), + cols=numberOfVariables * len(self.mesh._localNonOverlappingCellIDs), # self.mesh.globalNumberOfCells, # , # + bandwidth=bandwidth, + sizeHint=sizeHint, + matrix=matrix, + comm=mesh.communicator.petsc4py_comm) + + + @property + def _ao(self): + """Application Ordering to relate FiPy matrix rows to PETSc matrix rows + + FiPy naturally blocks matrix rows, one set of Equations (or Variables) at a time. + PETSc requires that all rows pertaining to a particular MPI node be contiguous. + This PETSc `AO` (Application Ordering) object converts between them. + + Only needed for FiPy to PETSc. We can efficiently slice from PETSc to + FiPy, but PETSc requires us to know the row IDs. + """ + if not hasattr(self, "_ao_"): + comm = self.mesh.communicator + + from mpi4py import MPI + + fipyIDs = self._globalNonOverlappingColIDs + N = len(fipyIDs) + + count = numerix.zeros((comm.Nproc,), dtype=int) + count[comm.procID] = N + comm.mpi4py_comm.Allreduce(sendbuf=MPI.IN_PLACE, recvbuf=count, op=MPI.MAX) + + petscIDs = numerix.arange(N) + numerix.sum(count[:comm.procID]) + + self._ao_ = PETSc.AO().createBasic(petsc=petscIDs.astype('int32'), + app=fipyIDs.astype('int32'), + comm=comm.petsc4py_comm) + return self._ao_ + + def _petsc2app(self, ids): + return self._ao.petsc2app(ids) + + def _cellIDsToGlobalRowIDs(self, IDs): + N = len(IDs) + M = self.numberOfEquations + return (numerix.vstack([IDs] * M) + numerix.indices((M,N))[0] * self.mesh.globalNumberOfCells).flatten() + + def _cellIDsToGlobalColIDs(self, IDs): + N = len(IDs) + M = self.numberOfVariables + return (numerix.vstack([IDs] * M) + numerix.indices((M,N))[0] * self.mesh.globalNumberOfCells).flatten() + + def _cellIDsToLocalRowIDs(self, IDs): + M = self.numberOfEquations + N = len(IDs) + return (numerix.vstack([IDs] * M) + numerix.indices((M,N))[0] * self.mesh.numberOfCells).flatten() + + def _cellIDsToLocalColIDs(self, IDs): + M = self.numberOfVariables + N = len(IDs) + return (numerix.vstack([IDs] * M) + numerix.indices((M,N))[0] * self.mesh.numberOfCells).flatten() + + @property + def _globalNonOverlappingRowIDs(self): + return self._cellIDsToGlobalRowIDs(self.mesh._globalNonOverlappingCellIDs) + + @property + def _globalNonOverlappingColIDs(self): + return self._cellIDsToGlobalColIDs(self.mesh._globalNonOverlappingCellIDs) + + @property + def _globalOverlappingRowIDs(self): + return self._cellIDsToGlobalRowIDs(self.mesh._globalOverlappingCellIDs) + + @property + def _globalCommonColIDs(self): + return list(range(0, self.numberOfVariables, self.mesh.globalNumberOfCells)) + + @property + def _globalOverlappingColIDs(self): + return self._cellIDsToGlobalColIDs(self.mesh._globalOverlappingCellIDs) + + @property + def _localNonOverlappingRowIDs(self): + return self._cellIDsToLocalRowIDs(self.mesh._localNonOverlappingCellIDs) + + @property + def _localOverlappingColIDs(self): + return self._cellIDsToLocalColIDs(self.mesh._localOverlappingCellIDs) + + @property + def _localNonOverlappingColIDs(self): + return self._cellIDsToLocalColIDs(self.mesh._localNonOverlappingCellIDs) + + def copy(self): + tmp = _PETScMatrixFromShape.copy(self) + copy = self.__class__(mesh=self.mesh) # FIXME: ??? , bandwidth=self.bandwidth) + copy.matrix = tmp.matrix + return copy + + def _getStencil(self, id1, id2): + id1 = self._globalOverlappingRowIDs[id1] + id2 = self._globalOverlappingColIDs[id2] + + mask = numerix.in1d(id1, self._globalNonOverlappingRowIDs) + id1 = self._ao.app2petsc(id1[mask].astype('int32')) + id2 = self._ao.app2petsc(id2[mask].astype('int32')) + + return id1, id2, mask + + def _globalNonOverlapping(self, vector, id1, id2): + """Transforms and subsets local overlapping values and coordinates to global non-overlapping + + :Parameters: + - `vector`: The overlapping values to insert. + - `id1`: The local overlapping row indices. + - `id2`: The local overlapping column indices. + + :Returns: + Tuple of (non-overlapping vector, + global non-overlapping row indices, + global non-overlapping column indices) + """ + id1, id2, mask = self._getStencil(id1, id2) + vector = vector[mask] + return (vector, id1, id2) + + def put(self, vector, id1, id2): + vector, id1, id2 = self._globalNonOverlapping(vector, id1, id2) + _PETScMatrixFromShape.put(self, vector=vector, id1=id1, id2=id2) + + def addAt(self, vector, id1, id2): + vector, id1, id2 = self._globalNonOverlapping(vector, id1, id2) + _PETScMatrixFromShape.addAt(self, vector=vector, id1=id1, id2=id2) + + @property + def _bodies(self): + if not hasattr(self, "_bodies_"): + self._bodies_ = numerix.in1d(self.mesh._globalOverlappingCellIDs, + self.mesh._globalNonOverlappingCellIDs) + return self._bodies_ + + @property + def _ghosts(self): + if not hasattr(self, "_ghosts_"): + self._ghosts_ = self.mesh._globalOverlappingCellIDs[~self._bodies] + self._ghosts_ = self._cellIDsToGlobalRowIDs(self._ghosts_) + self._ghosts_ = self._ao.app2petsc(self._ghosts_.astype('int32')) + + return self._ghosts_ + + def _fipy2petscGhost(self, var): + """Convert a FiPy Variable to a PETSc `GhostVec` + + Moves the ghosts to the end, as necessary. + `var` may be coupled/vector and so moving the ghosts is a bit subtle. + + Given a (2x4) vector variable `vij` + + ``` + v00 v01 (v02) processor 0 + v10 v11 (v12) + + (v01) v02 v03 processor 1 + (v11) v12 v13 + ``` + + where i is the vector index and j is the global index. + Elements in () are ghosted + + We end up with the `GhostVec` + + ``` + v00 v01 v10 v11 (v02) (v12) [4, 6] processor 0 + v02 v03 v12 v13 (v01) (v11) [1, 3] processor 1 + ``` + + where the [a, b] are the global ghost indices + """ + corporeal = numerix.asarray(var[..., self._bodies]).ravel() + incorporeal = numerix.asarray(var[..., ~self._bodies]).ravel() + array = numerix.concatenate([corporeal, incorporeal]) + + comm = self.mesh.communicator.petsc4py_comm + vec = PETSc.Vec().createGhostWithArray(ghosts=self._ghosts.astype('int32'), + array=array, + comm=comm) + + return vec + + + def _petsc2fipyGhost(self, vec): + """Convert a PETSc `GhostVec` to a FiPy Variable (form) + + Moves the ghosts from the end, as necessary. + The return Variable may be coupled/vector and so moving the ghosts + is a bit subtle. + + Given an 8-element `GhostVec` `vj` + + ``` + v0 v1 v2 v3 (v4) (v6) [4, 6] processor 0 + v4 v5 v6 v7 (v1) (v3) [1, 3] processor 1 + ``` + + where j is the global index and the `[a, b]` are the global ghost + indices. Elements in () are ghosted + + We end up with the (2x4) FiPy Variable + + ``` + v0 v1 (v4) processor 0 + v2 v3 (v6) + + (v1) v4 v4 processor 1 + (v3) v6 v7 + ``` + """ + N = len(self.mesh._globalOverlappingCellIDs) + M = self.numberOfEquations + var = numerix.empty((M, N)) + bodies = numerix.array(vec) + if M > 1: + bodies = numerix.reshape(bodies, (M, -1)) + var[..., self._bodies] = bodies + vec.ghostUpdate() + with vec.localForm() as lf: + if len(self._ghosts) > 0: + ids = numerix.arange(-len(self._ghosts), 0) + ghosts = numerix.reshape(numerix.array(lf)[ids], (M, -1)) + var[..., ~self._bodies] = ghosts + + return var.flatten() + + def __mul__(self, other): + """Multiply a sparse matrix by another sparse matrix + + >>> L1 = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=2) + >>> L1.put([3.,10.,numerix.pi,2.5], [0,0,1,2], [2,1,1,0]) + >>> L2 = _PETScIdentityMatrix(size=3, bandwidth=3) + >>> L2.put([4.38], [2], [1]) + >>> L2.put([4.38,12357.2,1.1], [2,1,0], [1,0,2]) + + >>> tmp = numerix.array(((1.23572000e+05, 2.31400000e+01, 3.00000000e+00), + ... (3.88212887e+04, 3.14159265e+00, 0.00000000e+00), + ... (2.50000000e+00, 0.00000000e+00, 2.75000000e+00))) + + >>> numerix.allclose((L1 * L2).numpyArray, tmp) + 1 + + or a sparse matrix by a vector + + >>> tmp = numerix.array((29., 6.28318531, 2.5)) + >>> numerix.allclose(L1 * numerix.array((1,2,3),'d'), tmp) + 1 + + or a vector by a sparse matrix + + >>> tmp = numerix.array((7.5, 16.28318531, 3.)) + >>> numerix.allclose(numerix.array((1,2,3),'d') * L1, tmp) ## The multiplication is broken. Numpy is calling __rmul__ for every element instead of with the whole array. + 1 + + + """ + N = self._shape[1] + + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + + if isinstance(other, (_PETScMatrix, PETSc.Vec)): + return _PETScMatrixFromShape.__mul__(self, other=other) + else: + shape = numerix.shape(other) + + if shape == (): + result = self.copy() + result.matrix = self.matrix * other + return result + else: + x = other[self._localNonOverlappingColIDs] + x = PETSc.Vec().createWithArray(x, comm=self.matrix.comm) + + y = PETSc.Vec().createGhost(ghosts=self._ghosts.astype('int32'), + size=(len(self._localNonOverlappingColIDs), None), + comm=self.matrix.comm) + self.matrix.mult(x, y) + return self._petsc2fipyGhost(vec=y) + + def takeDiagonal(self): + self.matrix.assemblyBegin() + self.matrix.assemblyEnd() + + y = PETSc.Vec().createGhost(ghosts=self._ghosts.astype('int32'), + size=(len(self._localNonOverlappingColIDs), None), + comm=self.matrix.comm) + self.matrix.getDiagonal(result=y) + return self._petsc2fipyGhost(vec=y) + + def flush(self): + """Deletes the copy of the PETSc matrix held. + """ + + if not getattr(self, 'cache', False): + del self.matrix + + def _test(self): + """Tests + + >>> m = _PETScMatrixFromShape(rows=3, cols=3, bandwidth=1) + >>> m.addAt((1., 0., 2.), (0, 2, 1), (1, 2, 0)) + >>> m.matrix.assemblyBegin() + >>> m.matrix.assemblyEnd() + + # FIXME: are these names even right? is this a good test? + + >>> col, row, val = m.matrix.getValuesCSR() + >>> print(numerix.allequal(col, [0, 1, 2, 3])) + True + >>> print(numerix.allequal(row, [1, 0, 2])) + True + >>> print(numerix.allclose(val, [1., 2., 0.])) + True + """ + pass + +class _PETScIdentityMatrix(_PETScMatrixFromShape): + """Represents a sparse identity matrix for pysparse. + """ + def __init__(self, size, bandwidth=1, comm=PETSc.COMM_SELF): + """Create a sparse matrix with `1` in the diagonal + + >>> print(_PETScIdentityMatrix(size=3)) + 1.000000 --- --- + --- 1.000000 --- + --- --- 1.000000 + """ + _PETScMatrixFromShape.__init__(self, rows=size, cols=size, bandwidth=bandwidth, comm=comm) + ids = numerix.arange(size) + self.put(numerix.ones(size, 'd'), ids, ids) + +class _PETScIdentityMeshMatrix(_PETScIdentityMatrix): + def __init__(self, mesh, bandwidth=1): + """Create a sparse matrix associated with a `Mesh` with `1` in the diagonal + + >>> from fipy import Grid1D + >>> from fipy.tools import serialComm + >>> mesh = Grid1D(nx=3, communicator=serialComm) + >>> print(_PETScIdentityMeshMatrix(mesh=mesh)) + 1.000000 --- --- + --- 1.000000 --- + --- --- 1.000000 + """ + _PETScIdentityMatrix.__init__(self, size=mesh.numberOfCells, bandwidth=bandwidth, + comm=mesh.communicator.petsc4py_comm) + +def _test(): + import fipy.tests.doctestPlus + return fipy.tests.doctestPlus.testmod() + +if __name__ == "__main__": + _test() diff --git a/fipy/matrices/scipyMatrix.py b/fipy/matrices/scipyMatrix.py index 589e48216b..a1d7608c98 100644 --- a/fipy/matrices/scipyMatrix.py +++ b/fipy/matrices/scipyMatrix.py @@ -237,11 +237,17 @@ def numpyArray(self): return self.matrix.toarray() def matvec(self, x): - """ - This method is required for scipy solvers. + """This method is required for scipy solvers. """ return self * x + def exportMmf(self, filename): + """Exports the matrix to a Matrix Market file of the given `filename`. + """ + from scipy.io import mmio + + mmio.mmwrite(filename, self.matrix) + def __getitem__(self, indices): return self.matrix[indices] diff --git a/fipy/matrices/test.py b/fipy/matrices/test.py index 3d46ad87e9..f06af2071c 100755 --- a/fipy/matrices/test.py +++ b/fipy/matrices/test.py @@ -15,6 +15,8 @@ docTestModuleNames = ('pysparseMatrix',) elif solver == 'pyamgx': docTestModuleNames = ('scipyMatrix',) +elif solver == 'petsc': + docTestModuleNames = ('petscMatrix',) else: raise ImportError('Unknown solver package %s' % solver) diff --git a/fipy/matrices/trilinosMatrix.py b/fipy/matrices/trilinosMatrix.py index ba3f2dc055..66c4f14b9b 100644 --- a/fipy/matrices/trilinosMatrix.py +++ b/fipy/matrices/trilinosMatrix.py @@ -11,7 +11,7 @@ from PyTrilinos import EpetraExt from fipy.matrices.sparseMatrix import _SparseMatrix -from fipy.tools import numerix, parallelComm +from fipy.tools import numerix # Current inadequacies of the matrix class: diff --git a/fipy/meshes/abstractMesh.py b/fipy/meshes/abstractMesh.py index 60ee27ac83..fdba9d81d8 100644 --- a/fipy/meshes/abstractMesh.py +++ b/fipy/meshes/abstractMesh.py @@ -712,7 +712,7 @@ def facesLeft(self): """ x = self.faceCenters[0] - return x == _madmin(x) + return x == self._minmin(x) @property def facesRight(self): @@ -734,7 +734,7 @@ def facesRight(self): """ x = self.faceCenters[0] - return x == _madmax(x) + return x == self._maxmax(x) @property def facesBottom(self): @@ -756,7 +756,7 @@ def facesBottom(self): """ y = self.faceCenters[1] - return y == _madmin(y) + return y == self._minmin(y) facesDown = facesBottom @@ -780,7 +780,7 @@ def facesTop(self): """ y = self.faceCenters[1] - return y == _madmax(y) + return y == self._maxmax(y) facesUp = facesTop @@ -799,7 +799,7 @@ def facesBack(self): """ z = self.faceCenters[2] - return z == _madmax(z) + return z == self._maxmax(z) @property def facesFront(self): @@ -816,7 +816,7 @@ def facesFront(self): """ z = self.faceCenters[2] - return z == _madmin(z) + return z == self._minmin(z) @property def _cellVertexIDs(self): @@ -1148,18 +1148,25 @@ def aspect2D(self): return float((yCoords.max() - yCoords.min()) / (xCoords.max() - xCoords.min())) + def _minmin(self, x): + """return minimum of all the minima on all processors + """ + if len(x) == 0: + minx = numerix.infty + else: + minx = min(x) + + return self.communicator.MinAll(minx) -def _madmin(x): - if len(x) == 0: - return 0 - else: - return min(x) + def _maxmax(self, x): + """return maximum of all the maxima on all processors + """ + if len(x) == 0: + maxx = -numerix.infty + else: + maxx = max(x) -def _madmax(x): - if len(x) == 0: - return 0 - else: - return max(x) + return self.communicator.MaxAll(maxx) def _test(): import fipy.tests.doctestPlus diff --git a/fipy/meshes/gmshMesh.py b/fipy/meshes/gmshMesh.py index 48b942e77e..fc3ff6c8d5 100755 --- a/fipy/meshes/gmshMesh.py +++ b/fipy/meshes/gmshMesh.py @@ -102,7 +102,7 @@ def _gmshVersion(communicator=parallelComm): return version -def openMSHFile(name, dimensions=None, coordDimensions=None, communicator=parallelComm, order=1, mode='r', background=None): +def openMSHFile(name, dimensions=None, coordDimensions=None, communicator=parallelComm, overlap=1, mode='r', background=None): """Open a Gmsh `MSH` file Parameters @@ -113,8 +113,12 @@ def openMSHFile(name, dimensions=None, coordDimensions=None, communicator=parall Dimension of mesh coordDimensions : int Dimension of shapes - order - ??? + overlap : int + The number of overlapping cells for parallel + simulations. Generally 1 is adequate. Higher order equations or + discretizations require more. If `overlap` is greater than one, + communication reverts to serial, as Gmsh only provides one layer + of ghost cells. mode : str Beginning with `r` for reading and `w` for writing. The file will be created if it doesn't exist when opened for writing; @@ -124,7 +128,7 @@ def openMSHFile(name, dimensions=None, coordDimensions=None, communicator=parall Specifies the desired characteristic lengths of the mesh cells """ - if order > 1: + if overlap > 1: communicator = serialComm # Enforce gmsh version to be either >= 2 or 2.5, based on Nproc. @@ -1571,8 +1575,12 @@ class Gmsh2D(Mesh2D): Gmsh geometry (`.geo`) file, or (iii) a Gmsh geometry script coordDimensions : int Dimension of shapes - order - ??? + overlap : int + The number of overlapping cells for parallel + simulations. Generally 1 is adequate. Higher order equations or + discretizations require more. If `overlap` is greater than one, + communication reverts to serial, as Gmsh only provides one layer + of ghost cells. background : ~fipy.variables.cellVariable.CellVariable Specifies the desired characteristic lengths of the mesh cells """ @@ -1581,14 +1589,14 @@ def __init__(self, arg, coordDimensions=2, communicator=parallelComm, - order=1, + overlap=1, background=None): self.mshFile = openMSHFile(arg, dimensions=2, coordDimensions=coordDimensions, communicator=communicator, - order=order, + overlap=overlap, mode='r', background=background) @@ -1874,17 +1882,21 @@ class Gmsh2DIn3DSpace(Gmsh2D): Gmsh geometry (`.geo`) file, or (iii) a Gmsh geometry script coordDimensions : int Dimension of shapes - order - ??? + overlap : int + The number of overlapping cells for parallel + simulations. Generally 1 is adequate. Higher order equations or + discretizations require more. If `overlap` is greater than one, + communication reverts to serial, as Gmsh only provides one layer + of ghost cells. background : ~fipy.variables.cellVariable.CellVariable Specifies the desired characteristic lengths of the mesh cells """ - def __init__(self, arg, communicator=parallelComm, order=1, background=None): + def __init__(self, arg, communicator=parallelComm, overlap=1, background=None): Gmsh2D.__init__(self, arg, coordDimensions=3, communicator=communicator, - order=order, + overlap=overlap, background=background) def _test(self): @@ -1952,16 +1964,20 @@ class Gmsh3D(Mesh): arg : str (i) the path to an `MSH` file, (ii) a path to a Gmsh geometry (`.geo`) file, or (iii) a Gmsh geometry script - order - ??? + overlap : int + The number of overlapping cells for parallel + simulations. Generally 1 is adequate. Higher order equations or + discretizations require more. If `overlap` is greater than one, + communication reverts to serial, as Gmsh only provides one layer + of ghost cells. background : ~fipy.variables.cellVariable.CellVariable Specifies the desired characteristic lengths of the mesh cells """ - def __init__(self, arg, communicator=parallelComm, order=1, background=None): + def __init__(self, arg, communicator=parallelComm, overlap=1, background=None): self.mshFile = openMSHFile(arg, dimensions=3, communicator=communicator, - order=order, + overlap=overlap, mode='r', background=background) @@ -2190,7 +2206,7 @@ class GmshGrid2D(Gmsh2D): """Should serve as a drop-in replacement for `Grid2D` """ def __init__(self, dx=1., dy=1., nx=1, ny=None, - coordDimensions=2, communicator=parallelComm, order=1): + coordDimensions=2, communicator=parallelComm, overlap=1): self.dx = dx self.dy = dy or dx self.nx = nx @@ -2198,7 +2214,7 @@ def __init__(self, dx=1., dy=1., nx=1, ny=None, arg = self._makeGridGeo(self.dx, self.dy, self.nx, self.ny) - Gmsh2D.__init__(self, arg, coordDimensions, communicator, order, background=None) + Gmsh2D.__init__(self, arg, coordDimensions, communicator, overlap, background=None) @property def _meshSpacing(self): @@ -2260,7 +2276,7 @@ class GmshGrid3D(Gmsh3D): """Should serve as a drop-in replacement for `Grid3D` """ def __init__(self, dx=1., dy=1., dz=1., nx=1, ny=None, nz=None, - communicator=parallelComm, order=1): + communicator=parallelComm, overlap=1): self.dx = dx self.dy = dy or dx self.dz = dz or dx @@ -2272,7 +2288,7 @@ def __init__(self, dx=1., dy=1., dz=1., nx=1, ny=None, nz=None, arg = self._makeGridGeo(self.dx, self.dy, self.dz, self.nx, self.ny, self.nz) - Gmsh3D.__init__(self, arg, communicator=communicator, order=order) + Gmsh3D.__init__(self, arg, communicator=communicator, overlap=overlap) @property def _meshSpacing(self): diff --git a/fipy/meshes/skewedGrid2D.py b/fipy/meshes/skewedGrid2D.py index 89ff8426f4..094f8f45f4 100644 --- a/fipy/meshes/skewedGrid2D.py +++ b/fipy/meshes/skewedGrid2D.py @@ -6,6 +6,7 @@ from fipy.tools import numerix from fipy.tools.numerix import random from fipy.tools.dimensions.physicalField import PhysicalField +from fipy.tools import serialComm from fipy.meshes.mesh2D import Mesh2D from fipy.meshes import Grid2D @@ -19,6 +20,8 @@ class SkewedGrid2D(Mesh2D): Creates a 2D grid mesh with horizontal faces numbered first and then vertical faces. The points are skewed by a random amount (between `rand` and `-rand`) in the X and Y directions. + + .. note:: This `Mesh` only operates in serial """ def __init__(self, dx = 1., dy = 1., nx = None, ny = 1, rand = 0, *args, **kwargs): self.args = { @@ -42,7 +45,7 @@ def __init__(self, dx = 1., dy = 1., nx = None, ny = 1, rand = 0, *args, **kwarg else: self.dy /= scale - self.grid = Grid2D(nx=nx, ny=ny, dx=dx, dy=dy) + self.grid = Grid2D(nx=nx, ny=ny, dx=dx, dy=dy, communicator=serialComm) self.numberOfVertices = self.grid._numberOfVertices @@ -63,7 +66,7 @@ def __init__(self, dx = 1., dy = 1., nx = None, ny = 1, rand = 0, *args, **kwarg cells = self.grid.cellFaceIDs - Mesh2D.__init__(self, changedVertices, faces, cells, *args, **kwargs) + Mesh2D.__init__(self, changedVertices, faces, cells, communicator=serialComm, *args, **kwargs) self.scale = scale diff --git a/fipy/solvers/__init__.py b/fipy/solvers/__init__.py index e0ca69cbd7..ef20132f8e 100644 --- a/fipy/solvers/__init__.py +++ b/fipy/solvers/__init__.py @@ -1,137 +1,146 @@ from __future__ import unicode_literals +from builtins import str +import os + from fipy.tools.parser import _parseSolver -from fipy.tools import parallelComm as _parallelComm from fipy.solvers.solver import * __all__ = list(solver.__all__) from future.utils import text_to_native_str __all__ = [text_to_native_str(n) for n in __all__] -solver = _parseSolver() +_desired_solver = _parseSolver() -def _envSolver(solver): - import os - if solver is None and 'FIPY_SOLVERS' in os.environ: - solver = os.environ['FIPY_SOLVERS'].lower() - return solver +if _desired_solver is None and 'FIPY_SOLVERS' in os.environ: + _desired_solver = os.environ['FIPY_SOLVERS'].lower() +del os + +try: + from mpi4py import MPI + _Nproc = MPI.COMM_WORLD.size + del MPI +except ImportError: + _Nproc = 1 -solver = _envSolver(solver) +_exceptions = [] class SerialSolverError(Exception): - def __init__(self, solver): - super(SerialSolverError, self).__init__(solver + ' does not run in parallel') + def __init__(self): + super(SerialSolverError, self).__init__('solver does not run in parallel') -if solver == "pysparse": - if _parallelComm.Nproc > 1: - raise SerialSolverError('pysparse') - from fipy.solvers.pysparse import * - __all__.extend(pysparse.__all__) - from fipy.matrices.pysparseMatrix import _PysparseMeshMatrix - _MeshMatrix = _PysparseMeshMatrix +_exceptions = {} -elif solver == "trilinos": - from fipy.solvers.trilinos import * - __all__.extend(trilinos.__all__) +solver = None - try: - from fipy.matrices.pysparseMatrix import _PysparseMeshMatrix - _MeshMatrix = _PysparseMeshMatrix - except ImportError: - from fipy.matrices.trilinosMatrix import _TrilinosMeshMatrix - _MeshMatrix = _TrilinosMeshMatrix - -elif solver == "scipy": - if _parallelComm.Nproc > 1: - raise SerialSolverError('scipy') - from fipy.solvers.scipy import * - __all__.extend(scipy.__all__) - from fipy.matrices.scipyMatrix import _ScipyMeshMatrix - _MeshMatrix = _ScipyMeshMatrix - -elif solver == "pyamg": - if _parallelComm.Nproc > 1: - raise SerialSolverError('pyamg') - from fipy.solvers.pyAMG import * - __all__.extend(pyAMG.__all__) - from fipy.matrices.scipyMatrix import _ScipyMeshMatrix - _MeshMatrix = _ScipyMeshMatrix - -elif solver == "pyamgx": - if _parallelComm.Nproc > 1: - raise SerialSolverError('pyamgx') - from fipy.solvers.pyamgx import * - __all__.extend(pyamgx.__all__) - from fipy.matrices.scipyMatrix import _ScipyMeshMatrix - _MeshMatrix = _ScipyMeshMatrix - -elif solver == "no-pysparse": - from fipy.solvers.trilinos import * - __all__.extend(trilinos.__all__) - from fipy.matrices.trilinosMatrix import _TrilinosMeshMatrix - _MeshMatrix = _TrilinosMeshMatrix - -elif solver is None: - # If no argument or environment variable, try importing them and seeing - # what works - - exceptions = [] +from fipy.tools.comms.dummyComm import DummyComm +serialComm, parallelComm = DummyComm(), DummyComm() +if solver is None and _desired_solver in ["pysparse", None]: try: - if _parallelComm.Nproc > 1: - raise SerialSolverError('pysparse') + if _Nproc > 1: + raise SerialSolverError() from fipy.solvers.pysparse import * __all__.extend(pysparse.__all__) - solver = "pysparse" from fipy.matrices.pysparseMatrix import _PysparseMeshMatrix _MeshMatrix = _PysparseMeshMatrix + solver = "pysparse" + except Exception as inst: + _exceptions["pysparse"] = inst + +if solver is None and _desired_solver in ["petsc", None]: + try: + from fipy.solvers.petsc import * + __all__.extend(petsc.__all__) + + from fipy.solvers.petsc.comms.serialPETScCommWrapper import SerialPETScCommWrapper + serialComm = SerialPETScCommWrapper() - except (ImportError, SerialSolverError) as inst: - exceptions.append(inst) + if _Nproc > 1: + from fipy.solvers.petsc.comms.parallelPETScCommWrapper import ParallelPETScCommWrapper + parallelComm = ParallelPETScCommWrapper() + else: + parallelComm = SerialPETScCommWrapper() - try: - from fipy.solvers.trilinos import * - __all__.extend(trilinos.__all__) - solver = "trilinos" + from fipy.matrices.petscMatrix import _PETScMeshMatrix + _MeshMatrix = _PETScMeshMatrix + solver = "petsc" + except Exception as inst: + _exceptions["petsc"] = inst + +if solver is None and _desired_solver in ["trilinos", "no-pysparse", None]: + try: + from fipy.solvers.trilinos import * + __all__.extend(trilinos.__all__) + + from fipy.solvers.trilinos.comms.serialEpetraCommWrapper import SerialEpetraCommWrapper + serialComm = SerialEpetraCommWrapper() + + if _Nproc > 1: + from fipy.solvers.trilinos.comms.parallelEpetraCommWrapper import ParallelEpetraCommWrapper + parallelComm = ParallelEpetraCommWrapper() + else: + parallelComm = SerialEpetraCommWrapper() + + if _desired_solver != "no-pysparse": try: from fipy.matrices.pysparseMatrix import _PysparseMeshMatrix _MeshMatrix = _PysparseMeshMatrix + solver = "trilinos" except ImportError: - solver = "no-pysparse" - from fipy.matrices.trilinosMatrix import _TrilinosMeshMatrix - _MeshMatrix = _TrilinosMeshMatrix - except ImportError as inst: - exceptions.append(inst) - - try: - if _parallelComm.Nproc > 1: - raise SerialSolverError('pyamg') - from fipy.solvers.pyAMG import * - __all__.extend(pyAMG.__all__) - solver = "pyamg" - from fipy.matrices.scipyMatrix import _ScipyMeshMatrix - _MeshMatrix = _ScipyMeshMatrix - except (ImportError, SerialSolverError) as inst: - exceptions.append(inst) - - try: - if _parallelComm.Nproc > 1: - raise SerialSolverError('scipy') - from fipy.solvers.scipy import * - __all__.extend(scipy.__all__) - solver = "scipy" - from fipy.matrices.scipyMatrix import _ScipyMeshMatrix - _MeshMatrix = _ScipyMeshMatrix - except (ImportError, SerialSolverError) as inst: - exceptions.append(inst) - import warnings - warnings.warn("Could not import any solver package. If you are using Trilinos, make sure you have all of the necessary Trilinos packages installed - Epetra, EpetraExt, AztecOO, Amesos, ML, and IFPACK.") - for inst in exceptions: - warnings.warn(inst.__class__.__name__ + ': ' + inst.message) - - -else: - raise ImportError('Unknown solver package %s' % solver) - + pass + + if solver is None: + # no-pysparse requested or pysparseMatrix failed to import + from fipy.matrices.trilinosMatrix import _TrilinosMeshMatrix + _MeshMatrix = _TrilinosMeshMatrix + solver = "no-pysparse" + except Exception as inst: + _exceptions["trilinos"] = inst + +if solver is None and _desired_solver in ["scipy", None]: + try: + if _Nproc > 1: + raise SerialSolverError() + from fipy.solvers.scipy import * + __all__.extend(scipy.__all__) + from fipy.matrices.scipyMatrix import _ScipyMeshMatrix + _MeshMatrix = _ScipyMeshMatrix + solver = "scipy" + except Exception as inst: + _exceptions["scipy"] = inst + +if solver is None and _desired_solver in ["pyamg", None]: + try: + if _Nproc > 1: + raise SerialSolverError() + from fipy.solvers.pyAMG import * + __all__.extend(pyAMG.__all__) + from fipy.matrices.scipyMatrix import _ScipyMeshMatrix + _MeshMatrix = _ScipyMeshMatrix + solver = "pyamg" + except Exception as inst: + _exceptions["pyamg"] = inst + +if solver is None and _desired_solver in ["pyamgx", None]: + try: + if _parallelComm.Nproc > 1: + raise SerialSolverError('pyamgx') + from fipy.solvers.pyamgx import * + __all__.extend(pyamgx.__all__) + from fipy.matrices.scipyMatrix import _ScipyMeshMatrix + _MeshMatrix = _ScipyMeshMatrix + solver = "pyamgx" + except Exception as inst: + _exceptions["pyamgx"] = inst + +if solver is None: + if _desired_solver is None: + raise ImportError('Unable to load a solver: %s' % str(_exceptions)) + else: + if len(_exceptions) > 0: + raise ImportError('Unable to load solver %s: %s' % (_desired_solver, _exceptions[_desired_solver])) + else: + raise ImportError('Unknown solver package %s' % _desired_solver) from fipy.tests.doctestPlus import register_skipper @@ -144,3 +153,4 @@ def __init__(self, solver): test=lambda: solver != 'pyamgx', why="the PyAMGX solver is being used.", skipWarning=True) +del register_skipper diff --git a/fipy/solvers/petsc/__init__.py b/fipy/solvers/petsc/__init__.py new file mode 100644 index 0000000000..f1640563cd --- /dev/null +++ b/fipy/solvers/petsc/__init__.py @@ -0,0 +1,22 @@ +from fipy.solvers.petsc.linearLUSolver import * +from fipy.solvers.petsc.linearPCGSolver import * +from fipy.solvers.petsc.linearGMRESSolver import * +from fipy.solvers.petsc.linearBicgSolver import * +from fipy.solvers.petsc.linearCGSSolver import * +from fipy.solvers.petsc.dummySolver import * + +DefaultSolver = LinearGMRESSolver +DefaultAsymmetricSolver = LinearGMRESSolver +DummySolver = DummySolver +GeneralSolver = DefaultSolver + +__all__ = ["DefaultSolver", + "DummySolver", + "DefaultAsymmetricSolver", + "GeneralSolver"] + +__all__.extend(linearLUSolver.__all__) +__all__.extend(linearPCGSolver.__all__) +__all__.extend(linearGMRESSolver.__all__) +__all__.extend(linearBicgSolver.__all__) +__all__.extend(linearCGSSolver.__all__) diff --git a/fipy/solvers/petsc/comms/__init__.py b/fipy/solvers/petsc/comms/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/fipy/solvers/petsc/comms/parallelPETScCommWrapper.py b/fipy/solvers/petsc/comms/parallelPETScCommWrapper.py new file mode 100644 index 0000000000..a3e8e7b7f0 --- /dev/null +++ b/fipy/solvers/petsc/comms/parallelPETScCommWrapper.py @@ -0,0 +1,90 @@ +#!/usr/bin/env python + +## -*-Pyth-*- + # ################################################################### + # FiPy - Python-based finite volume PDE solver + # + # FILE: "parallelPETScCommWrapper.py" + # + # Author: Jonathan Guyer + # Author: Daniel Wheeler + # Author: James Warren + # mail: NIST + # www: http://www.ctcms.nist.gov/fipy/ + # + # ======================================================================== + # This software was developed at the National Institute of Standards + # and Technology by employees of the Federal Government in the course + # of their official duties. Pursuant to title 17 Section 105 of the + # United States Code this software is not subject to copyright + # protection and is in the public domain. FiPy is an experimental + # system. NIST assumes no responsibility whatsoever for its use by + # other parties, and makes no guarantees, expressed or implied, about + # its quality, reliability, or any other characteristic. We would + # appreciate acknowledgement if the software is used. + # + # This software can be redistributed and/or modified freely + # provided that any derivative works bear some notice that they are + # derived from it, and any modified versions bear some notice that + # they have been modified. + # ======================================================================== + # See the file "license.terms" for information on usage and redistribution + # of this file, and for a DISCLAIMER OF ALL WARRANTIES. + # + # ################################################################### + ## + +from petsc4py import PETSc +from mpi4py import MPI + +from fipy.tools import numerix +from fipy.solvers.petsc.comms.petscCommWrapper import PETScCommWrapper + +__all__ = ["ParallelPETScCommWrapper"] + +class ParallelPETScCommWrapper(PETScCommWrapper): + """MPI Communicator wrapper + + Encapsulates capabilities needed for PETSc. + """ + + def __init__(self): + super(ParallelPETScCommWrapper, self).__init__(petsc4py_comm=PETSc.COMM_WORLD) + + @property + def procID(self): + return self.petsc4py_comm.rank + + @property + def Nproc(self): + return self.petsc4py_comm.size + + def Barrier(self): + self.petsc4py_comm.Barrier() + + def all(self, a, axis=None): + return self.mpi4py_comm.allreduce(a.all(axis=axis), op=MPI.LAND) + + def any(self, a, axis=None): + return self.mpi4py_comm.allreduce(a.any(axis=axis), op=MPI.LOR) + + def allclose(self, a, b, rtol=1.e-5, atol=1.e-8): + return self.mpi4py_comm.allreduce(numerix.allclose(a, b, rtol=rtol, atol=atol), op=MPI.LAND) + + def allequal(self, a, b): + return self.mpi4py_comm.allreduce(numerix.allequal(a, b), op=MPI.LAND) + + def bcast(self, obj=None, root=0): + return self.mpi4py_comm.bcast(obj=obj, root=root) + + def allgather(self, sendobj=None): + return self.mpi4py_comm.allgather(sendobj=sendobj) + + def sum(self, a, axis=None): + return self.mpi4py_comm.allreduce(numerix.array(a).sum(axis=axis), op=MPI.SUM) + + def MaxAll(self, vec): + return self.mpi4py_comm.allreduce(vec, op=MPI.MAX) + + def MinAll(self, vec): + return self.mpi4py_comm.allreduce(vec, op=MPI.MIN) diff --git a/fipy/solvers/petsc/comms/petscCommWrapper.py b/fipy/solvers/petsc/comms/petscCommWrapper.py new file mode 100644 index 0000000000..def94bd029 --- /dev/null +++ b/fipy/solvers/petsc/comms/petscCommWrapper.py @@ -0,0 +1,62 @@ +#!/usr/bin/env python + +## -*-Pyth-*- + # ################################################################### + # FiPy - Python-based finite volume PDE solver + # + # FILE: "petscCommWrapper.py" + # + # Author: Jonathan Guyer + # Author: Daniel Wheeler + # Author: James Warren + # mail: NIST + # www: http://www.ctcms.nist.gov/fipy/ + # + # ======================================================================== + # This software was developed at the National Institute of Standards + # and Technology by employees of the Federal Government in the course + # of their official duties. Pursuant to title 17 Section 105 of the + # United States Code this software is not subject to copyright + # protection and is in the public domain. FiPy is an experimental + # system. NIST assumes no responsibility whatsoever for its use by + # other parties, and makes no guarantees, expressed or implied, about + # its quality, reliability, or any other characteristic. We would + # appreciate acknowledgement if the software is used. + # + # This software can be redistributed and/or modified freely + # provided that any derivative works bear some notice that they are + # derived from it, and any modified versions bear some notice that + # they have been modified. + # ======================================================================== + # See the file "license.terms" for information on usage and redistribution + # of this file, and for a DISCLAIMER OF ALL WARRANTIES. + # + # ################################################################### + ## + +__docformat__ = 'restructuredtext' + +from petsc4py import PETSc + +from fipy.tools import numerix +from fipy.tools.comms.abstractCommWrapper import AbstractCommWrapper + +__all__ = ["PETScCommWrapper"] + +class PETScCommWrapper(AbstractCommWrapper): + """MPI Communicator wrapper + + Encapsulates capabilities needed for PETSc. + Some capabilities are not parallel. + """ + + def __init__(self, petsc4py_comm=PETSc.COMM_WORLD): + self.petsc4py_comm = petsc4py_comm + super(PETScCommWrapper, self).__init__() + + @property + def mpi4py_comm(self): + return self.petsc4py_comm.tompi4py() + + def Norm2(self, vec): + return vec.norm(norm_type=1) diff --git a/fipy/solvers/petsc/comms/serialPETScCommWrapper.py b/fipy/solvers/petsc/comms/serialPETScCommWrapper.py new file mode 100644 index 0000000000..f390d3ae96 --- /dev/null +++ b/fipy/solvers/petsc/comms/serialPETScCommWrapper.py @@ -0,0 +1,54 @@ +#!/usr/bin/env python + +## -*-Pyth-*- + # ################################################################### + # FiPy - Python-based finite volume PDE solver + # + # FILE: "serialPETScCommWrapper.py" + # + # Author: Jonathan Guyer + # Author: Daniel Wheeler + # Author: James Warren + # mail: NIST + # www: http://www.ctcms.nist.gov/fipy/ + # + # ======================================================================== + # This software was developed at the National Institute of Standards + # and Technology by employees of the Federal Government in the course + # of their official duties. Pursuant to title 17 Section 105 of the + # United States Code this software is not subject to copyright + # protection and is in the public domain. FiPy is an experimental + # system. NIST assumes no responsibility whatsoever for its use by + # other parties, and makes no guarantees, expressed or implied, about + # its quality, reliability, or any other characteristic. We would + # appreciate acknowledgement if the software is used. + # + # This software can be redistributed and/or modified freely + # provided that any derivative works bear some notice that they are + # derived from it, and any modified versions bear some notice that + # they have been modified. + # ======================================================================== + # See the file "license.terms" for information on usage and redistribution + # of this file, and for a DISCLAIMER OF ALL WARRANTIES. + # + # ################################################################### + ## + +from petsc4py import PETSc + +from fipy.solvers.petsc.comms.petscCommWrapper import PETScCommWrapper + +__all__ = ["SerialPETScCommWrapper"] + +class SerialPETScCommWrapper(PETScCommWrapper): + def __init__(self): + super(SerialPETScCommWrapper, self).__init__(petsc4py_comm=PETSc.COMM_SELF) + + @property + def procID(self): + return 0 + + @property + def Nproc(self): + return 1 + diff --git a/fipy/solvers/petsc/dummySolver.py b/fipy/solvers/petsc/dummySolver.py new file mode 100644 index 0000000000..1f45bc9c41 --- /dev/null +++ b/fipy/solvers/petsc/dummySolver.py @@ -0,0 +1,15 @@ +__docformat__ = 'restructuredtext' + +from fipy.solvers.petsc.petscSolver import PETScSolver + +__all__ = ["DummySolver"] + +class DummySolver(PETScSolver): + + """Solver that doesn't do anything. + + PETSc is intolerant of having zeros on the diagonal + """ + + def _solve_(self, L, x, b): + pass diff --git a/fipy/solvers/petsc/linearBicgSolver.py b/fipy/solvers/petsc/linearBicgSolver.py new file mode 100644 index 0000000000..3db002fa96 --- /dev/null +++ b/fipy/solvers/petsc/linearBicgSolver.py @@ -0,0 +1,14 @@ +__docformat__ = 'restructuredtext' + +from fipy.solvers.petsc.petscKrylovSolver import PETScKrylovSolver + +__all__ = ["LinearBicgSolver"] + +class LinearBicgSolver(PETScKrylovSolver): + + """ + The `LinearBicgSolver` is an interface to the biconjugate gradient solver in + PETSc, using no preconditioner by default. + """ + + solver = 'bicg' diff --git a/fipy/solvers/petsc/linearCGSSolver.py b/fipy/solvers/petsc/linearCGSSolver.py new file mode 100644 index 0000000000..265a6b0dec --- /dev/null +++ b/fipy/solvers/petsc/linearCGSSolver.py @@ -0,0 +1,14 @@ +__docformat__ = 'restructuredtext' + +from fipy.solvers.petsc.petscKrylovSolver import PETScKrylovSolver + +__all__ = ["LinearCGSSolver"] + +class LinearCGSSolver(PETScKrylovSolver): + + """ + The `LinearCGSSolver` is an interface to the conjugate gradient squared + solver in PETSc, using no preconditioner by default. + """ + + solver = 'cgs' diff --git a/fipy/solvers/petsc/linearGMRESSolver.py b/fipy/solvers/petsc/linearGMRESSolver.py new file mode 100644 index 0000000000..e95ba3e4e3 --- /dev/null +++ b/fipy/solvers/petsc/linearGMRESSolver.py @@ -0,0 +1,15 @@ +__docformat__ = 'restructuredtext' + +from fipy.solvers.petsc.petscKrylovSolver import PETScKrylovSolver + +__all__ = ["LinearGMRESSolver"] + +class LinearGMRESSolver(PETScKrylovSolver): + + """ + The `LinearGMRESSolver` is an interface to the GMRES solver in PETSc, + using no preconditioner by default. + + """ + + solver = 'gmres' diff --git a/fipy/solvers/petsc/linearLUSolver.py b/fipy/solvers/petsc/linearLUSolver.py new file mode 100644 index 0000000000..0351ec4fc5 --- /dev/null +++ b/fipy/solvers/petsc/linearLUSolver.py @@ -0,0 +1,70 @@ +from __future__ import division +from builtins import range +from past.utils import old_div +__docformat__ = 'restructuredtext' + +import os + +from petsc4py import PETSc + +from fipy.solvers.petsc.petscSolver import PETScSolver + +__all__ = ["LinearLUSolver"] + +class LinearLUSolver(PETScSolver): + + """ + The `LinearLUSolver` is an interface to the LU preconditioner in PETSc. + A direct solve is performed. + + """ + + def __init__(self, tolerance=1e-10, iterations=10, precon="lu"): + """ + :Parameters: + - `tolerance`: The required error tolerance. + - `iterations`: The maximum number of iterative steps to perform. + - `precon`: *Ignored*. + + """ + PETScSolver.__init__(self, tolerance=tolerance, + iterations=iterations, precon="lu") + + def _solve_(self, L, x, b): + ksp = PETSc.KSP() + ksp.create(PETSc.COMM_WORLD) + ksp.setType("preonly") + ksp.getPC().setType(self.preconditioner) + # TODO: SuperLU invoked with PCFactorSetMatSolverType(pc, MATSOLVERSUPERLU) + # see: http://www.mcs.anl.gov/petsc/petsc-dev/src/ksp/ksp/examples/tutorials/ex52.c.html + # PETSc.PC().setFactorSolverType("superlu") + + L.assemblyBegin() + L.assemblyEnd() + ksp.setOperators(L) + ksp.setFromOptions() + + for iteration in range(self.iterations): + errorVector = L * x - b + tol = errorVector.norm() + + if iteration == 0: + tol0 = tol + + if (tol / tol0) <= self.tolerance: + break + + xError = x.copy() + + ksp.solve(errorVector, xError) + x -= xError + + if 'FIPY_VERBOSE_SOLVER' in os.environ: + from fipy.tools.debug import PRINT +# L.view() +# b.view() + PRINT('solver:', ksp.type) + PRINT('precon:', ksp.getPC().type) + PRINT('iterations: %d / %d' % (iteration+1, self.iterations)) + PRINT('residual:', errorVector.norm(1)) + diff --git a/fipy/solvers/petsc/linearPCGSolver.py b/fipy/solvers/petsc/linearPCGSolver.py new file mode 100644 index 0000000000..fc467ca0e8 --- /dev/null +++ b/fipy/solvers/petsc/linearPCGSolver.py @@ -0,0 +1,15 @@ +__docformat__ = 'restructuredtext' + +from fipy.solvers.petsc.petscKrylovSolver import PETScKrylovSolver + +__all__ = ["LinearPCGSolver"] + +class LinearPCGSolver(PETScKrylovSolver): + + """ + The `LinearPCGSolver` is an interface to the cg solver in PETSc, + using no preconditioner by default. + + """ + + solver = 'cg' diff --git a/fipy/solvers/petsc/petscKrylovSolver.py b/fipy/solvers/petsc/petscKrylovSolver.py new file mode 100644 index 0000000000..f5263ac74d --- /dev/null +++ b/fipy/solvers/petsc/petscKrylovSolver.py @@ -0,0 +1,76 @@ +__docformat__ = 'restructuredtext' + +import os + +from petsc4py import PETSc + +from fipy.solvers.petsc.petscSolver import PETScSolver + +__all__ = ["PETScKrylovSolver"] + +_reason = {1: "KSP_CONVERGED_RTOL_NORMAL", + 9: "KSP_CONVERGED_ATOL_NORMAL", + 2: "KSP_CONVERGED_RTOL", + 3: "KSP_CONVERGED_ATOL", + 4: "KSP_CONVERGED_ITS", + 5: "KSP_CONVERGED_CG_NEG_CURVE", + 6: "KSP_CONVERGED_CG_CONSTRAINED", + 7: "KSP_CONVERGED_STEP_LENGTH", + 8: "KSP_CONVERGED_HAPPY_BREAKDOWN", + -2: "KSP_DIVERGED_NULL", + -3: "KSP_DIVERGED_ITS", + -4: "KSP_DIVERGED_DTOL", + -5: "KSP_DIVERGED_BREAKDOWN", + -6: "KSP_DIVERGED_BREAKDOWN_BICG", + -7: "KSP_DIVERGED_NONSYMMETRIC", + -8: "KSP_DIVERGED_INDEFINITE_PC", + -9: "KSP_DIVERGED_NANORINF", + -10: "KSP_DIVERGED_INDEFINITE_MAT", + -11: "KSP_DIVERGED_PC_FAILED", + 0: "KSP_CONVERGED_ITERATING"} + +class PETScKrylovSolver(PETScSolver): + + """ + .. attention:: This class is abstract, always create one of its subclasses. + It provides the code to call all Krylov solvers from the PETSc package. + + """ + + def __init__(self, tolerance=1e-10, iterations=1000, precon=None): + """ + :Parameters: + - `tolerance`: The required error tolerance. + - `iterations`: The maximum number of iterative steps to perform. + - `precon`: Preconditioner to use (string). + + """ + if self.__class__ is PETScKrylovSolver: + raise NotImplementedError("can't instantiate abstract base class") + + PETScSolver.__init__(self, tolerance=tolerance, + iterations=iterations, precon=precon) + + def _solve_(self, L, x, b): + ksp = PETSc.KSP() + ksp.create(L.comm) + ksp.setType(self.solver) + if self.preconditioner is not None: + ksp.getPC().setType(self.preconditioner) + ksp.setTolerances(rtol=self.tolerance, max_it=self.iterations) + L.assemblyBegin() + L.assemblyEnd() + ksp.setOperators(L) + ksp.setFromOptions() + ksp.solve(b, x) + + if 'FIPY_VERBOSE_SOLVER' in os.environ: + from fipy.tools.debug import PRINT +# L.view() +# b.view() + PRINT('solver:', ksp.type) + PRINT('precon:', ksp.getPC().type) + PRINT('convergence: %s' % _reason[ksp.reason]) + PRINT('iterations: %d / %d' % (ksp.its, self.iterations)) + PRINT('norm:', ksp.norm) + PRINT('norm_type:', ksp.norm_type) diff --git a/fipy/solvers/petsc/petscSolver.py b/fipy/solvers/petsc/petscSolver.py new file mode 100644 index 0000000000..4ea2d534f5 --- /dev/null +++ b/fipy/solvers/petsc/petscSolver.py @@ -0,0 +1,95 @@ +__docformat__ = 'restructuredtext' + +from petsc4py import PETSc + +from fipy.solvers.solver import Solver +from fipy.tools import numerix + +class PETScSolver(Solver): + + """ + .. attention:: This class is abstract. Always create one of its subclasses. + + """ + def __init__(self, *args, **kwargs): + if self.__class__ is PETScSolver: + raise NotImplementedError("can't instantiate abstract base class") + else: + Solver.__init__(self, *args, **kwargs) + + @property + def _globalMatrixAndVectors(self): + if not hasattr(self, 'globalVectors'): + globalMatrix = self.matrix + + overlappingVector = self.matrix._fipy2petscGhost(var=self.var) + + from fipy.variables.coupledCellVariable import _CoupledCellVariable + if isinstance(self.RHSvector, _CoupledCellVariable): + RHSvector = self.RHSvector + else: + RHSvector = numerix.reshape(numerix.asarray(self.RHSvector), self.var.shape) + + overlappingRHSvector = self.matrix._fipy2petscGhost(var=RHSvector) + + self.globalVectors = (globalMatrix, overlappingVector, overlappingRHSvector) + + return self.globalVectors + + def _deleteGlobalMatrixAndVectors(self): + self.matrix.flush() + del self.globalVectors + + def _solve(self): + from fipy.terms import SolutionVariableNumberError + + globalMatrix, overlappingVector, overlappingRHSvector = self._globalMatrixAndVectors + + if ((self.matrix == 0) + or (self.matrix.matrix.sizes[0][1] != self.matrix.matrix.sizes[1][1]) + or (self.matrix.matrix.sizes[0][1] != overlappingVector.size)): + + raise SolutionVariableNumberError + + self._solve_(globalMatrix.matrix, + overlappingVector, + overlappingRHSvector) + + value = self.matrix._petsc2fipyGhost(vec=overlappingVector) + self.var.value = numerix.reshape(value, self.var.shape) + + self._deleteGlobalMatrixAndVectors() + del self.var + del self.RHSvector + + @property + def _matrixClass(self): + from fipy.solvers import _MeshMatrix + return _MeshMatrix + + def _calcResidualVector(self, residualFn=None): + if residualFn is not None: + return residualFn(self.var, self.matrix, self.RHSvector) + else: + residual, globalMatrix = self._calcResidualVector_() + + residual.ghostUpdate() + with residual.localForm() as lf: + residual = numerix.array(lf) + return residual + + def _calcResidualVector_(self): + globalMatrix, overlappingVector, overlappingRHSvector = self._globalMatrixAndVectors + residual = globalMatrix * overlappingVector - overlappingRHSvector + return residual, globalMatrix + + def _calcResidual(self, residualFn=None): + if residualFn is not None: + return residualFn(self.var, self.matrix, self.RHSvector) + else: + comm = self.var.mesh.communicator + residual, globalMatrix = self._calcResidualVector_() + return comm.Norm2(residual) + + def _calcRHSNorm(self): + return self.nonOverlappingRHSvector.Norm2() diff --git a/fipy/solvers/trilinos/__init__.py b/fipy/solvers/trilinos/__init__.py index 91603a8e35..be1d11a9bf 100644 --- a/fipy/solvers/trilinos/__init__.py +++ b/fipy/solvers/trilinos/__init__.py @@ -1,4 +1,5 @@ from __future__ import unicode_literals + def _dealWithTrilinosImportPathologies(): ## The import scipy statement is added to allow PyTrilinos to run ## without throwing a segmentation fault. This is caused by weird @@ -16,14 +17,28 @@ def _dealWithTrilinosImportPathologies(): current_working_directory_path = os.getcwd() from PyTrilinos import ML # Gets around strange Trilinos import-order bugs. os.chdir(current_working_directory_path) - # When run in MPI mode, the first Trilinos import makes the "current directory" - # be the directory with the executable file that's being run. As best I can - # tell, this happens in MPI_Init, deep in Trilinos. Possibly because "current - # directory" not well-defined in MPI between processors? - - # This fix relies on this being the FIRST place to import any Trilinos module. - # The only way to import Trilinos things should be to do "from fipy.solvers - # import *" and have it automatically import Trilinos via this file. + # When run in MPI mode, the first Trilinos import makes the "current + # directory" be the directory with the executable file that's being + # run. As best I can tell, this happens in MPI_Init, deep in Trilinos. + # Possibly because "current directory" not well-defined in MPI between + # processors? + + # This fix relies on this being the FIRST place to import any Trilinos + # module. The only way to import Trilinos things should be to do + # `from fipy.solvers import *` and have it automatically import Trilinos + # via this file. + + from PyTrilinos import Epetra + + import platform + if platform.dist()[0] == 'debian': + import PyTrilinos + if '10.0.4' in PyTrilinos.version(): + # The package mpi4py is a required package if you are using + # Trilinos on a Debian platform with Trilinos version 10.0.4 due to + # a Trilinos bug (see ). + + from mpi4py import MPI _dealWithTrilinosImportPathologies() diff --git a/fipy/solvers/trilinos/comms/__init__.py b/fipy/solvers/trilinos/comms/__init__.py new file mode 100644 index 0000000000..e69de29bb2 diff --git a/fipy/solvers/trilinos/comms/epetraCommWrapper.py b/fipy/solvers/trilinos/comms/epetraCommWrapper.py new file mode 100644 index 0000000000..9ed5372917 --- /dev/null +++ b/fipy/solvers/trilinos/comms/epetraCommWrapper.py @@ -0,0 +1,88 @@ +#!/usr/bin/env python + +## -*-Pyth-*- + # ################################################################### + # FiPy - Python-based finite volume PDE solver + # + # FILE: "epetraCommWrapper.py" + # + # Author: Jonathan Guyer + # Author: Daniel Wheeler + # Author: James Warren + # mail: NIST + # www: http://www.ctcms.nist.gov/fipy/ + # + # ======================================================================== + # This software was developed at the National Institute of Standards + # and Technology by employees of the Federal Government in the course + # of their official duties. Pursuant to title 17 Section 105 of the + # United States Code this software is not subject to copyright + # protection and is in the public domain. FiPy is an experimental + # system. NIST assumes no responsibility whatsoever for its use by + # other parties, and makes no guarantees, expressed or implied, about + # its quality, reliability, or any other characteristic. We would + # appreciate acknowledgement if the software is used. + # + # This software can be redistributed and/or modified freely + # provided that any derivative works bear some notice that they are + # derived from it, and any modified versions bear some notice that + # they have been modified. + # ======================================================================== + # See the file "license.terms" for information on usage and redistribution + # of this file, and for a DISCLAIMER OF ALL WARRANTIES. + # + # ################################################################### + ## + +__docformat__ = 'restructuredtext' + +from PyTrilinos import Epetra + +from fipy.tools import numerix +from fipy.tools.comms.abstractCommWrapper import AbstractCommWrapper + +__all__ = ["EpetraCommWrapper"] + +class EpetraCommWrapper(AbstractCommWrapper): + """MPI Communicator wrapper + + Encapsulates capabilities needed for Epetra. + Some capabilities are not parallel. + """ + + def __init__(self): + self.epetra_comm = Epetra.PyComm() + super(EpetraCommWrapper, self).__init__() + + @property + def procID(self): + return self.epetra_comm.MyPID() + + @property + def Nproc(self): + return self.epetra_comm.NumProc() + + def Barrier(self): + self.epetra_comm.Barrier() + + def sum(self, a, axis=None): + summed = numerix.array(a).sum(axis=axis) + shape = summed.shape + if shape == (): + summed = summed.reshape((1,)) + parallelSummed = self.epetra_comm.SumAll(summed) + if shape == (): + parallelSummed = parallelSummed.reshape(()) + return parallelSummed + + def __setstate__(self, dict): + self.__init__() + + def Norm2(self, vec): + return vec.Norm2() + + def MaxAll(self, vec): + return self.epetra_comm.MaxAll(numerix.array(vec)) + + def MinAll(self, vec): + return self.epetra_comm.MinAll(numerix.array(vec)) diff --git a/fipy/tools/comms/mpi4pyCommWrapper.py b/fipy/solvers/trilinos/comms/parallelEpetraCommWrapper.py similarity index 58% rename from fipy/tools/comms/mpi4pyCommWrapper.py rename to fipy/solvers/trilinos/comms/parallelEpetraCommWrapper.py index df571c1cfc..3c776ef5e6 100644 --- a/fipy/tools/comms/mpi4pyCommWrapper.py +++ b/fipy/solvers/trilinos/comms/parallelEpetraCommWrapper.py @@ -1,39 +1,37 @@ from __future__ import unicode_literals -from fipy.tools.comms.commWrapper import CommWrapper +from mpi4py import MPI + from fipy.tools import numerix +from fipy.solvers.trilinos.comms.epetraCommWrapper import EpetraCommWrapper -__all__ = ["Mpi4pyCommWrapper"] +__all__ = ["ParallelEpetraCommWrapper"] from future.utils import text_to_native_str __all__ = [text_to_native_str(n) for n in __all__] -class Mpi4pyCommWrapper(CommWrapper): +class ParallelEpetraCommWrapper(EpetraCommWrapper): """MPI Communicator wrapper Encapsulates capabilities needed for both Epetra and mpi4py. - """ - - def __init__(self, Epetra, MPI): - self.MPI = MPI - self.mpi4py_comm = self.MPI.COMM_WORLD - CommWrapper.__init__(self, Epetra) - + + def __init__(self): + self.mpi4py_comm = MPI.COMM_WORLD + super(ParallelEpetraCommWrapper, self).__init__() + def __setstate__(self, dict): - from PyTrilinos import Epetra - from mpi4py import MPI - self.__init__(Epetra=Epetra, MPI=MPI) - + self.__init__() + def all(self, a, axis=None): - return self.mpi4py_comm.allreduce(a.all(axis=axis), op=self.MPI.LAND) + return self.mpi4py_comm.allreduce(a.all(axis=axis), op=MPI.LAND) def any(self, a, axis=None): - return self.mpi4py_comm.allreduce(a.any(axis=axis), op=self.MPI.LOR) + return self.mpi4py_comm.allreduce(a.any(axis=axis), op=MPI.LOR) def allclose(self, a, b, rtol=1.e-5, atol=1.e-8): - return self.mpi4py_comm.allreduce(numerix.allclose(a, b, rtol=rtol, atol=atol), op=self.MPI.LAND) + return self.mpi4py_comm.allreduce(numerix.allclose(a, b, rtol=rtol, atol=atol), op=MPI.LAND) def allequal(self, a, b): - return self.mpi4py_comm.allreduce(numerix.allequal(a, b), op=self.MPI.LAND) + return self.mpi4py_comm.allreduce(numerix.allequal(a, b), op=MPI.LAND) def bcast(self, obj, root=0): return self.mpi4py_comm.bcast(obj=obj, root=root) @@ -51,3 +49,13 @@ def allgather(self, obj): """ return self.mpi4py_comm.allgather(sendobj=obj) + + def MaxAll(self, obj): + """return max across all processes + """ + return self.mpi4py_comm.allreduce(sendobj=obj, op=max) + + def MinAll(self, obj): + """return min across all processes + """ + return self.mpi4py_comm.allreduce(sendobj=obj, op=min) diff --git a/fipy/solvers/trilinos/comms/serialEpetraCommWrapper.py b/fipy/solvers/trilinos/comms/serialEpetraCommWrapper.py new file mode 100644 index 0000000000..c59165db1c --- /dev/null +++ b/fipy/solvers/trilinos/comms/serialEpetraCommWrapper.py @@ -0,0 +1,16 @@ +from fipy.tools import numerix +from fipy.solvers.trilinos.comms.epetraCommWrapper import EpetraCommWrapper + +__all__ = ["SerialEpetraCommWrapper"] + +class SerialEpetraCommWrapper(EpetraCommWrapper): + @property + def procID(self): + return 0 + + @property + def Nproc(self): + return 1 + + def Norm2(self, vec): + return numerix.L2norm(numerix.asarray(vec)) diff --git a/fipy/solvers/trilinos/trilinosAztecOOSolver.py b/fipy/solvers/trilinos/trilinosAztecOOSolver.py index 3fffde0374..d05264886a 100644 --- a/fipy/solvers/trilinos/trilinosAztecOOSolver.py +++ b/fipy/solvers/trilinos/trilinosAztecOOSolver.py @@ -15,7 +15,8 @@ class TrilinosAztecOOSolver(TrilinosSolver): """ - .. attention:: This class is abstract, always create on of its subclasses. It provides the code to call all solvers from the Trilinos AztecOO package. + .. attention:: This class is abstract, always create on of its subclasses. + It provides the code to call all solvers from the Trilinos AztecOO package. """ diff --git a/fipy/terms/abstractDiffusionTerm.py b/fipy/terms/abstractDiffusionTerm.py index 26e7342dbc..8a49a752bf 100644 --- a/fipy/terms/abstractDiffusionTerm.py +++ b/fipy/terms/abstractDiffusionTerm.py @@ -241,7 +241,7 @@ def __doBCs(self, SparseMatrix, higherOrderBCs, N, M, coeffs, coefficientMatrix, if 'FIPY_DISPLAY_MATRIX' in os.environ: self._viewer.title = r"%s %s" % (boundaryCondition.__class__.__name__, self.__class__.__name__) self._viewer.plot(matrix=LL, RHSvector=bb) - from fipy import raw_input + from fipy import input input() self.__bcAdd(coefficientMatrix, boundaryB, LL, bb) @@ -373,7 +373,7 @@ def __higherOrderbuildMatrix(self, var, SparseMatrix, boundaryConditions=(), dt= del higherOrderBCs del mm - b = L * lowerOrderb + b + b = numerix.asarray(L * lowerOrderb) + b del lowerOrderb L = L * lowerOrderL diff --git a/fipy/terms/binaryTerm.py b/fipy/terms/binaryTerm.py index 8c9a41d3ee..085248584a 100644 --- a/fipy/terms/binaryTerm.py +++ b/fipy/terms/binaryTerm.py @@ -232,7 +232,7 @@ def _test(self): ... [ 0, 0, 0, -1.0, 0, 1.0, 0, 0, 0, 0, 1.0, 0, ], ... [ 0, 0, 0, 0, -1.0, -1.0, 0, 0, 0, 0, 0, 1.0, ]])) True - >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.matrix * v.value.ravel(), (2, -1))).globalValue.ravel() + >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(numerix.asarray(eqn.matrix * v.value.ravel()), (2, -1))).globalValue.ravel() >>> RHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.RHSvector, (2, -1))).globalValue.ravel() >>> print(numerix.allclose(LHS, RHS)) True @@ -257,7 +257,7 @@ def _test(self): ... [ 0, 0, 0, -1.0, 0, 1.0, 0, 0, 0, 0, 1.0, 0, ], ... [ 0, 0, 0, 0, -1.0, -1.0, 0, 0, 0, 0, 0, 1.0, ]])) True - >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.matrix * v.value.ravel(), (2, -1))).globalValue.ravel() + >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(numerix.asarray(eqn.matrix * v.value.ravel()), (2, -1))).globalValue.ravel() >>> RHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.RHSvector, (2, -1))).globalValue.ravel() >>> print(numerix.allclose(LHS, RHS)) True @@ -286,7 +286,7 @@ def _test(self): ... [ 0, 0, 0, 0, 2.0, -2.0, 0, 0, 0, 0, 1.0, 0, ], ... [ 0, 0, 0, 0, 0, 2.0, 0, 0, 0, 0, 0, 1.0, ]])) True - >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.matrix * v.value.ravel(), (2, -1))).globalValue.ravel() + >>> LHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(numerix.asarray(eqn.matrix * v.value.ravel()), (2, -1))).globalValue.ravel() >>> RHS = CellVariable(mesh=m, rank=1, elementshape=(2,), value=numerix.reshape(eqn.RHSvector, (2, -1))).globalValue.ravel() >>> print(numerix.allclose(LHS, RHS)) True diff --git a/fipy/terms/faceTerm.py b/fipy/terms/faceTerm.py index 7d58d88546..d1fdf66a09 100644 --- a/fipy/terms/faceTerm.py +++ b/fipy/terms/faceTerm.py @@ -55,7 +55,7 @@ def _implicitBuildMatrix_(self, SparseMatrix, L, id1, id2, b, weight, var, bound if 'FIPY_DISPLAY_MATRIX' in os.environ: self._viewer.title = r"%s %s" % (boundaryCondition.__class__.__name__, self.__class__.__name__) self._viewer.plot(matrix=LL, RHSvector=bb) - from fipy import raw_input + from fipy import input input() L += LL diff --git a/fipy/terms/term.py b/fipy/terms/term.py index 9fa1e8852a..1d4e540d3c 100644 --- a/fipy/terms/term.py +++ b/fipy/terms/term.py @@ -148,7 +148,7 @@ def _prepareLinearSystem(self, var, solver, boundaryConditions, dt): else: RHSvector = solver.RHSvector self._viewer.plot(matrix=solver.matrix, RHSvector=RHSvector) - from fipy import raw_input + from fipy import input input() return solver @@ -244,7 +244,7 @@ def justResidualVector(self, var=None, solver=None, boundaryConditions=(), dt=No >>> from fipy import * >>> m = Grid1D(nx=10) >>> v = CellVariable(mesh=m) - >>> len(DiffusionTerm().justResidualVector(v)) == m.numberOfCells + >>> len(numerix.asarray(DiffusionTerm().justResidualVector(v))) == m.numberOfCells True Parameters diff --git a/fipy/tests/test.py b/fipy/tests/test.py index e1f7f156b4..3221ade324 100644 --- a/fipy/tests/test.py +++ b/fipy/tests/test.py @@ -29,6 +29,7 @@ class test(_test): ('pysparse', None, "run FiPy using Pysparse solvers (default)"), ('scipy', None, "run FiPy using SciPy solvers"), ('Scipy', None, "run FiPy using SciPy solvers"), + ('petsc', None, "run FiPy using PETSc solvers"), ('no-pysparse', None, "run FiPy without using the Pysparse solvers"), ('pyamg', None, "run FiPy without using the PyAMG solvers"), ('pyamgx', None, "run FiPy using the pyamgx solvers"), @@ -66,6 +67,7 @@ def initialize_options(self): self.pyamg = False self.pyamgx = False self.scipy = False + self.petsc = False self.timetests = None self.skfmm = False self.lsmlib = False @@ -123,7 +125,7 @@ def _test_args(self): def printPackageInfo(self): - for pkg in ['fipy', 'numpy', 'pysparse', 'scipy', 'matplotlib', 'mpi4py', 'pyamgx']: + for pkg in ['fipy', 'numpy', 'pysparse', 'scipy', 'matplotlib', 'mpi4py', 'petsc4py', 'pyamgx']: try: mod = __import__(pkg) diff --git a/fipy/tools/__init__.py b/fipy/tools/__init__.py index 55325be528..2b4cf0a78d 100644 --- a/fipy/tools/__init__.py +++ b/fipy/tools/__init__.py @@ -1,56 +1,9 @@ from __future__ import absolute_import from __future__ import unicode_literals from builtins import range -def _parallelImport(): - try: - import scipy - except: - pass - - from PyTrilinos import Epetra - - import platform - if platform.dist()[0] == 'debian': - import PyTrilinos - if '10.0.4' in PyTrilinos.version(): - try: - from mpi4py import MPI - except ImportError: - raise Exception("Could not import mpi4py. The package mpi4py is a required package if you are using Trilinos on a Debian platform with Trilinos version 10.0.4 due to a Trilinos bug (see ). Try installing using 'easy_install mpi4py'.") - - from fipy.tools.comms.commWrapper import ParallelCommWrapper - parallelComm = ParallelCommWrapper(Epetra=Epetra) - - if parallelComm.Nproc > 1: - - try: - from mpi4py import MPI - from fipy.tools.comms.mpi4pyCommWrapper import Mpi4pyCommWrapper - parallelComm = Mpi4pyCommWrapper(Epetra=Epetra, MPI=MPI) - except ImportError: - raise ImportError("Could not import mpi4py. The package mpi4py is a required package if you are using Trilinos in parallel. Try installing using 'easy_install mpi4py'.") - - from fipy.tools.comms.serialCommWrapper import SerialCommWrapper - return SerialCommWrapper(Epetra=Epetra), parallelComm - -def _getComms(): - from fipy.tools.parser import _parseSolver - if _parseSolver() in ("trilinos", "no-pysparse"): - serialComm, parallelComm = _parallelImport() - elif _parseSolver() is None: - try: - serialComm, parallelComm = _parallelImport() - except ImportError: - from fipy.tools.comms.dummyComm import DummyComm - serialComm, parallelComm = DummyComm(), DummyComm() - else: - from fipy.tools.comms.dummyComm import DummyComm - serialComm, parallelComm = DummyComm(), DummyComm() - - return serialComm, parallelComm - -serial, parallel = serialComm, parallelComm = _getComms() +from fipy.solvers import serialComm, parallelComm +serial, parallel = serialComm, parallelComm from fipy.tests.doctestPlus import register_skipper diff --git a/fipy/tools/comms/abstractCommWrapper.py b/fipy/tools/comms/abstractCommWrapper.py new file mode 100644 index 0000000000..8a87e5453a --- /dev/null +++ b/fipy/tools/comms/abstractCommWrapper.py @@ -0,0 +1,74 @@ +from builtins import object +__docformat__ = 'restructuredtext' + +from fipy.tools import numerix + +__all__ = ["AbstractCommWrapper"] + +class AbstractCommWrapper(object): + """MPI Communicator wrapper + + Encapsulates capabilities needed for possibly parallel operations. + Some capabilities are not parallel. + + """ + + def __init__(self): + pass + + def __repr__(self): + return "%s()" % self.__class__.__name__ + + @property + def procID(self): + raise NotImplementedError + + @property + def Nproc(self): + raise NotImplementedError + + def Barrier(self): + pass + + def all(self, a, axis=None): + return a.all(axis=axis) + + def any(self, a, axis=None): + return a.any(axis=axis) + + def allclose(self, a, b, rtol=1.e-5, atol=1.e-8): + return numerix.allclose(a, b, rtol=rtol, atol=atol) + + def allequal(self, a, b): + return numerix.allequal(a, b) + + def bcast(self, obj, root=0): + return obj + + def allgather(self, obj): + return obj + + def sum(self, a, axis=None): + return a.sum(axis=axis) + + def __getstate__(self): + return {'dummy': 0} + + def __setstate__(self, dict): + self.__init__() + + def Norm2(self, vec): + return numerix.L2norm(vec) + + @staticmethod + def _tolist(vec): + try: + return list(vec) + except TypeError: + return [vec] + + def MaxAll(self, vec): + return max(self._tolist(vec)) + + def MinAll(self, vec): + return min(self._tolist(vec)) diff --git a/fipy/tools/comms/commWrapper.py b/fipy/tools/comms/commWrapper.py deleted file mode 100644 index 8462de071b..0000000000 --- a/fipy/tools/comms/commWrapper.py +++ /dev/null @@ -1,81 +0,0 @@ -from __future__ import unicode_literals -from builtins import object -__docformat__ = 'restructuredtext' - -from fipy.tools import numerix - -__all__ = ["CommWrapper", "ParallelCommWrapper"] -from future.utils import text_to_native_str -__all__ = [text_to_native_str(n) for n in __all__] - -class CommWrapper(object): - """MPI Communicator wrapper - - Encapsulates capabilities needed for Epetra. Some capabilities are not parallel. - - """ - - def __init__(self, Epetra=None): - self.epetra_comm = Epetra.PyComm() - - def __repr__(self): - return "%s()" % self.__class__.__name__ - - @property - def procID(self): - return self.epetra_comm.MyPID() - - @property - def Nproc(self): - return self.epetra_comm.NumProc() - - def Barrier(self): - self.epetra_comm.Barrier() - - def all(self, a, axis=None): - return a.all(axis=axis) - - def any(self, a, axis=None): - return a.any(axis=axis) - - def allclose(self, a, b, rtol=1.e-5, atol=1.e-8): - return numerix.allclose(a, b, rtol=rtol, atol=atol) - - def allequal(self, a, b): - return numerix.allequal(a, b) - - def bcast(self, obj, root=0): - return obj - - def allgather(self, obj): - return obj - - def sum(self, a, axis=None): - summed = numerix.array(a).sum(axis=axis) - shape = summed.shape - if shape == (): - summed = summed.reshape((1,)) - parallelSummed = self.epetra_comm.SumAll(summed) - if shape == (): - parallelSummed = parallelSummed.reshape(()) - return parallelSummed - - def __getstate__(self): - return {'dummy': 0} - - def __setstate__(self, dict): - from PyTrilinos import Epetra - self.__init__(Epetra=Epetra) - - def Norm2(self, vec): - return vec.Norm2() - - def MaxAll(self, vec): - return self.epetra_comm.MaxAll(numerix.array(vec)) - - def MinAll(self, vec): - return self.epetra_comm.MinAll(numerix.array(vec)) - -class ParallelCommWrapper(CommWrapper): - """MPI Communicator wrapper for parallel processes""" - pass diff --git a/fipy/tools/comms/dummyComm.py b/fipy/tools/comms/dummyComm.py index 5befcc643b..192050acaa 100644 --- a/fipy/tools/comms/dummyComm.py +++ b/fipy/tools/comms/dummyComm.py @@ -1,26 +1,16 @@ from __future__ import unicode_literals from fipy.tools import numerix -from fipy.tools.comms.serialCommWrapper import SerialCommWrapper +from fipy.tools.comms.abstractCommWrapper import AbstractCommWrapper __all__ = ["DummyComm"] from future.utils import text_to_native_str __all__ = [text_to_native_str(n) for n in __all__] -class DummyComm(SerialCommWrapper): - def __init__(self): - pass - - def Barrier(self): - pass - - def sum(self, a, axis=None): - return a.sum(axis=axis) - - def MaxAll(self, vec): - return max(numerix.array(vec)) - - def MinAll(self, vec): - return min(numerix.array(vec)) - - def __setstate__(self, dict): - self.__init__() +class DummyComm(AbstractCommWrapper): + @property + def procID(self): + return 0 + + @property + def Nproc(self): + return 1 diff --git a/fipy/tools/comms/serialCommWrapper.py b/fipy/tools/comms/serialCommWrapper.py deleted file mode 100644 index 90994597df..0000000000 --- a/fipy/tools/comms/serialCommWrapper.py +++ /dev/null @@ -1,19 +0,0 @@ -from __future__ import unicode_literals -from fipy.tools.comms.commWrapper import CommWrapper - -__all__ = ["SerialCommWrapper"] -from future.utils import text_to_native_str -__all__ = [text_to_native_str(n) for n in __all__] - -class SerialCommWrapper(CommWrapper): - @property - def procID(self): - return 0 - - @property - def Nproc(self): - return 1 - - def Norm2(self, vec): - from fipy.tools import numerix - return numerix.L2norm(numerix.asarray(vec)) diff --git a/fipy/tools/dimensions/physicalField.py b/fipy/tools/dimensions/physicalField.py index 09ded28b72..b46e272ac4 100755 --- a/fipy/tools/dimensions/physicalField.py +++ b/fipy/tools/dimensions/physicalField.py @@ -2132,7 +2132,7 @@ def _getUnitStrings(): def _getSortedUnitStrings(unitDict): strings = [] - keys = [str(key) for key in unitDict.keys()] + keys = [str(key) for key in list(unitDict.keys())] keys.sort(key=str.lower) for key in keys: if key in unitDict: diff --git a/fipy/tools/parser.py b/fipy/tools/parser.py index 03d10ff80e..9a573c07aa 100644 --- a/fipy/tools/parser.py +++ b/fipy/tools/parser.py @@ -61,6 +61,8 @@ def _parseSolver(): return 'scipy' elif '--pyamgx' in args: return 'pyamgx' + elif '--petsc' in args: + return 'petsc' elif 'FIPY_SOLVERS' in os.environ: return os.environ['FIPY_SOLVERS'].lower() else: