usnistgov · tkphd · Aug 17, 2015 · Sep 26, 2014 · Sep 26, 2014 · Sep 26, 2014
diff --git a/DISCLAIMER.txt → DISCLAIMER.rst b/DISCLAIMER.txt → DISCLAIMER.rst
diff --git a/INSTALLATION.txt → INSTALLATION.rst b/INSTALLATION.txt → INSTALLATION.rst
@@ -87,7 +87,7 @@ with Git_.
    to :term:`FiPy` become available (upgrades via Git_ will handle
    this issue automatically).
 
-.. _Git:       http://matforge.org/fipy/browserfipy
+.. _Git:       https://github.com/usnistgov/fipy
 .. _compressed archive:      http://www.ctcms.nist.gov/fipy/download/
 
 ---------------

diff --git a/LICENSE.txt → LICENSE.rst b/LICENSE.txt → LICENSE.rst
diff --git a/MANIFEST-WINDOWS.in b/MANIFEST-WINDOWS.in
@@ -1,10 +1,10 @@
-include *.txt
+include *.rst
 
-recursive-include examples *.py *.msh *.gz *.txt
+recursive-include examples *.py *.msh *.gz *.rst
 recursive-include fipy *.msh
 include FiPy-*.win32.exe
 
-recursive-include documentation/ *.txt
+recursive-include documentation/ *.rst
 recursive-exclude examples *.png *.pdf
 recursive-exclude fipy *.png *.pdf
 

diff --git a/MANIFEST.in b/MANIFEST.in
@@ -1,7 +1,7 @@
-include *.txt
-# include MANIFEST MANIFEST.in *.txt
+include *.rst
+# include MANIFEST MANIFEST.in *.rst
 
-recursive-include documentation *.txt
+recursive-include documentation *.rst
 recursive-exclude examples *.png *.pdf
 recursive-exclude fipy *.png *.pdf
 

diff --git a/README.txt → README.rst b/README.txt → README.rst
@@ -144,17 +144,16 @@ Support
 -------
 
 You can communicate with the :term:`FiPy` developers and with other
-users via our `mailing list`_ and we welcome you to use the `tracking
-system`_ for bugs, support requests, feature requests and patch
-submissions <http://matforge.org/fipy/report>. We also monitor 
+users via our `mailing list`_ and we welcome you to use the `issue
+tracker`_ for bugs, support requests, feature requests and patch
+submissions <https://github.com/usnistgov/fipy/issues>. We also monitor 
 StackOverflow_ for questions tagged with "fipy". We welcome
 collaborative efforts on this project.
 
 :term:`FiPy` is a member of MatForge_, a project of the `Materials
 Digital Library Pathway`_. This National Science Foundation funded
-service provides management of our public source code repository, our
-bug tracking system, and a "wiki" space for public contributions of
-code snippets, discussions, and tutorials.
+service provides a "wiki" space for public contributions of
+code snippets, discussions, and tutorials and hosts our testing framework.
 
 .. toctree::
 
@@ -236,7 +235,7 @@ or a
 .. _MSED:                 http://www.nist.gov/mml/msed/
 .. _NIST:                 http://www.nist.gov/
 .. _compressed archive:   http://www.ctcms.nist.gov/fipy/download/FiPy-1.1.tar.gz
-.. _tracking system:      http://matforge.org/fipy/report
+.. _issue tracker:        https://github.com/usnistgov/fipy/issues
 .. _mailing list:         http://www.ctcms.nist.gov/fipy/documentation/MAIL.html
 .. _Sourceforge:          http://www.sourceforge.net/projects/fipy
 .. _Materials Digital Library Pathway: http://matdl.org

diff --git a/documentation/ADMINISTRATA.txt → documentation/ADMINISTRATA.rst b/documentation/ADMINISTRATA.txt → documentation/ADMINISTRATA.rst
@@ -9,9 +9,9 @@ Branches
 --------
 
 Whether fixing a bug or adding a feature, all work on FiPy should be based 
-on a reported `Trac ticket`_. Assuming ticket number 12345, branch the code::
+on a reported `GitHub issue`_. Assuming issue number 12345, branch the code::
 
-    $ BRANCH=ticket12345-Summary_of_what_branch_addresses
+    $ BRANCH=issue12345-Summary_of_what_branch_addresses
     $ git checkout -b $BRANCH develop
 
 Edit and add to branch::
@@ -44,7 +44,7 @@ Submit branch for code review
 
    **Administrators Only!**
 
-   Push the code to matforge for automated testing::
+   Push the code to GitHub for automated testing::
 
        $ git push origin $BRANCH
 
@@ -89,7 +89,7 @@ Refactoring complete: merge branch to develop
 
        $ python setup.py test
 
-   Push the code to matforge for automated testing::
+   Push the code to GitHub for automated testing::
 
        $ git push origin develop
 
@@ -146,7 +146,7 @@ Make sure ``develop`` is ready for release::
 
    $ git checkout develop
 
-Check items in the tickets_ and update the :file:`README.txt`::
+Check items in the issues_ and update the :file:`README.txt`::
 
    $ git commit README.txt -m "REL: update new features for release"
 
@@ -244,20 +244,13 @@ Upload the build products to PyPI
 
     $ python setup.py sdist upload
 
-Upload the build products and documentation from :file:`dist/` to MatForge and 
+Upload the build products and documentation from :file:`dist/` and 
 the web site to CTCMS ::
 
     $ export FIPY_WWWHOST=bunter:/u/WWW/wd15/fipy
     $ export FIPY_WWWACTIVATE=updatewww
     $ python setup.py upload_products --pdf --html --tarball --winzip
 
-.. note::
-
-   If appropriate (probably not), update the links to current files:
-
-     * http://matforge.org/fipy/wiki/FiPyDownloadCurrent?action=edit
-     * http://matforge.org/fipy/wiki/FiPyManual?action=edit
-
 .. warning:: Some versions of ``rsync`` on Mac OS X have caused problems
    when they try to upload erroneous ``\rsrc`` directories. Version 2.6.2
    does not have this problem.
@@ -267,8 +260,8 @@ Make an announcement to `fipy@nist.gov`_
 Build (``python setup.py bdist --formats=wininst``) a Windows `PyVTK`_
 executable and upload to download page.
 
-.. _Trac ticket: http://matforge.org/fipy/newticket
-.. _tickets: http://matforge.org/fipy/report
+.. _GitHub issue: https://github.com/usnistgov/fipy/issues/new
+.. _issues: https://github.com/usnistgov/fipy/issues
 .. _Buildbot: http://build.cmi.kent.edu:8010/tgrid
 .. _fipy@nist.gov: mailto:fipy@nist.gov
 .. _PyVTK: http://cens.ioc.ee/projects/pyvtk/

diff --git a/documentation/API.txt → documentation/API.rst b/documentation/API.txt → documentation/API.rst
diff --git a/documentation/BUILDBOT.txt → documentation/BUILDBOT.rst b/documentation/BUILDBOT.txt → documentation/BUILDBOT.rst
diff --git a/documentation/CODESPEED.txt → documentation/CODESPEED.rst b/documentation/CODESPEED.txt → documentation/CODESPEED.rst
diff --git a/documentation/CREDITS.txt → documentation/CREDITS.rst b/documentation/CREDITS.txt → documentation/CREDITS.rst
diff --git a/documentation/EFFICIENCY.txt → documentation/EFFICIENCY.rst b/documentation/EFFICIENCY.txt → documentation/EFFICIENCY.rst
diff --git a/documentation/FAQ.txt → documentation/FAQ.rst b/documentation/FAQ.txt → documentation/FAQ.rst
@@ -561,4 +561,4 @@ What if my question isn't answered here?
 
 Please post your question to the
 mailing list <http://www.ctcms.nist.gov/fipy/mail.html>
-or file a Tracker request at <http://matforge.org/fipy/report>.
+or file an issue at <https://github.com/usnistgov/fipy/issues/new>.
diff --git a/documentation/GIT.txt → documentation/GIT.rst b/documentation/GIT.txt → documentation/GIT.rst
@@ -3,8 +3,8 @@ Git usage
 ---------
 
 All stages of :term:`FiPy` development are archived in a Git
-repository at MatForge_. You can browse through the code at
-http://matforge.org/fipy/browser/fipy and, using a `Git client`_, you can
+repository at GitHub_. You can browse through the code at
+https://github.com/usnistgov/fipy and, using a `Git client`_, you can
 download various tagged revisions of :term:`FiPy` depending on your needs. 
 
 .. attention:: 
@@ -35,7 +35,7 @@ development to track.
 
 A fresh copy of the :term:`FiPy` source code  can be obtained with::
 
-   $ git clone git://code.matforge.org/nist/fipy.git
+   $ git clone https://github.com/usnistgov/fipy.git
 
 An existing Git checkout of FiPy can be shifted to a different `<branch>` of
 development by issuing the command::
@@ -87,6 +87,6 @@ The `Pro Git book`_ :cite:`ProGit` is particularly instructive.
 
 .. _Pro Git book: http://git-scm.com/book
 
-.. _MatForge: http://matforge.org/fipy
+.. _GitHub: https://github.com/usnistgov/fipy
 
 .. _a successful Git branching model: http://nvie.com/posts/a-successful-git-branching-model/
diff --git a/documentation/GUIDELINES.txt → documentation/GUIDELINES.rst b/documentation/GUIDELINES.txt → documentation/GUIDELINES.rst
diff --git a/documentation/MAIL.txt → documentation/MAIL.rst b/documentation/MAIL.txt → documentation/MAIL.rst
diff --git a/documentation/PUBLICATIONS.txt → documentation/PUBLICATIONS.rst b/documentation/PUBLICATIONS.txt → documentation/PUBLICATIONS.rst
diff --git a/documentation/RESOURCES.txt → documentation/RESOURCES.rst b/documentation/RESOURCES.txt → documentation/RESOURCES.rst
diff --git a/documentation/SOLVERS.txt → documentation/SOLVERS.rst b/documentation/SOLVERS.txt → documentation/SOLVERS.rst
diff --git a/documentation/USAGE.txt → documentation/USAGE.rst b/documentation/USAGE.txt → documentation/USAGE.rst
@@ -86,13 +86,12 @@ We have a few known, intermittent failures:
     have an effect on actual simulations.
 
 Although the test suite may show warnings, there should be no other errors.
-Any errors should be investigated or reported on the `tracking
-system`_. Users can see if there are any known problems for the latest
-:term:`FiPy` distribution by checking `FiPy's automated test
-display`_.
+Any errors should be investigated or reported on the `issue tracker`_.
+Users can see if there are any known problems for the latest :term:`FiPy`
+distribution by checking `FiPy's automated test display`_.
 
 .. _FiPy's automated test display: http://build.cmi.kent.edu:8010/console
-.. _tracking system: http://matforge.org/fipy/newticket
+.. _issue tracker: https://github.com/usnistgov/fipy/issues/new
 
 Below are a number of common `Command-line Flags`_ for testing various
 :term:`FiPy` configurations.
@@ -648,7 +647,7 @@ Manual
 
 You can view the manual online at <http://www.ctcms.nist.gov/fipy> or you 
 can `download the latest manual`_ from 
-<http://matforge.org/fipy/wiki/FiPyManual>. Alternatively,
+<http://www.ctcms.nist.gov/fipy/download/>. Alternatively,
 it may be possible to build a fresh copy by issuing the following
 command in the base directory::
 
@@ -680,7 +679,7 @@ command in the base directory::
    $ pip install -e git+git@github.com:mcmtroffaes/pybtex-docutils.git#egg=pybtex-docutils
    $ pip install -e git+git@github.com:mcmtroffaes/sphinxcontrib-bibtex.git#egg=sphinxcontrib-bibtex
 
-.. _download the latest manual:  http://matforge.org/fipy/wiki/FiPyManual
+.. _download the latest manual:  http://www.ctcms.nist.gov/fipy/download/
 .. _hg: http://mercurial.selenic.com
 .. _bzr: http://bazaar.canonical.com
 .. _git: http://git-scm.com

diff --git a/documentation/VIEWERS.txt → documentation/VIEWERS.rst b/documentation/VIEWERS.txt → documentation/VIEWERS.rst
diff --git a/documentation/VKML.txt → documentation/VKML.rst b/documentation/VKML.txt → documentation/VKML.rst
diff --git a/documentation/_templates/index.html b/documentation/_templates/index.html
@@ -103,18 +103,18 @@ <h2>Applications</h2>
      </td></tr>
    </table>
 
-   <h2><a href="/cgi-bin/redirect.py?url=http://matforge.org/fipy">FiPy@MatForge</a></h2>
+   <h2><a href="download">Download</a></h2>
+
+   <h2><a href="/cgi-bin/redirect.py?url=https://github.com/usnistgov/fipy">FiPy@GitHub</a></h2>
    <table class="contentstable" align="center"><tr>
      <td width="50%">
        <p class="biglink"><a class="biglink" 
-       href="/cgi-bin/redirect.py?url=http://matforge.org/fipy/wiki/FiPyDownloadCurrent">Download</a></p>
+       href="/cgi-bin/redirect.py?url=https://github.com/usnistgov/fipy">Source Code</a></p>
        <p class="biglink"><a class="biglink" 
-       href="/cgi-bin/redirect.py?url=http://matforge.org/fipy/browser">Source Code</a></p>
+       href="/cgi-bin/redirect.py?url=https://github.com/usnistgov/fipy/issues">Reporting Bugs</a></p>
      </td><td width="50%">
        <p class="biglink"><a class="biglink" 
-       href="/cgi-bin/redirect.py?url=http://matforge.org/fipy">wiki</a></p>
-       <p class="biglink"><a class="biglink" 
-       href="/cgi-bin/redirect.py?url=http://matforge.org/fipy/report">Reporting Bugs</a></p>
+       href="/cgi-bin/redirect.py?url=https://github.com/usnistgov/fipy/wiki">wiki</a></p>
      </td></tr>
    </table>
 

diff --git a/documentation/_templates/indexsidebar.html b/documentation/_templates/indexsidebar.html
@@ -32,5 +32,5 @@ <h3>Questions? Suggestions?</h3>
 <iframe src="http://blog.gmane.org/recent.php?group=gmane.comp.python.fipy&type=topics&content=subject&table.font-size=small" width="100%"></iframe>
 </p>
 <p>You can also open an issue at the
-  <a href="http://matforge.org/fipy/report">tracker</a>.</p>
+  <a href="/cgi-bin/redirect.py?url=https://github.com/usnistgov/fipy/issues">tracker</a>.</p>
 </div>
diff --git a/documentation/conf.py b/documentation/conf.py
@@ -40,7 +40,7 @@
 templates_path = ['_templates']
 
 # The suffix of source filenames.
-source_suffix = '.txt'
+source_suffix = '.rst'
 
 # The encoding of source files.
 #source_encoding = 'utf-8'
@@ -81,15 +81,15 @@
 
 # List of directories, relative to source directory, that shouldn't be searched
 # for source files.
-exclude_patterns = ['fipy/generated/modules.txt',
-                    'fipy/generated/__init__.txt',
+exclude_patterns = ['fipy/generated/modules.rst',
+                    'fipy/generated/__init__.rst',
                     'build', 
                     'dist',
                     'FiPy.egg-info', 
                     'documentation/_build', 
-                    'documentation/tutorial/package/generated/modules.txt',
+                    'documentation/tutorial/package/generated/modules.rst',
                     'documentation/sphinxext',
-                    'documentation/sphinxext/bibtex/bibstuff/examples/*.txt',
+                    'documentation/sphinxext/bibtex/bibstuff/examples/*.rst',
                     '**/.svn',
                     '**/.git']
 
@@ -115,14 +115,14 @@
 
 autoclass_content = "both"
 
-autosummary_generate = ['examples/diffusion/index.txt',
-                        'examples/convection/index.txt',
-                        'examples/phase/index.txt',
-                        'examples/levelSet/index.txt',
-                        'examples/cahnHilliard/index.txt',
-                        'examples/flow/index.txt',
-                        'examples/reactiveWetting/index.txt',
-                        'examples/updating/index.txt']
+autosummary_generate = ['examples/diffusion/index.rst',
+                        'examples/convection/index.rst',
+                        'examples/phase/index.rst',
+                        'examples/levelSet/index.rst',
+                        'examples/cahnHilliard/index.rst',
+                        'examples/flow/index.rst',
+                        'examples/reactiveWetting/index.rst',
+                        'examples/updating/index.rst']
 
 autodoc_member_order = 'alphabetical'
 

diff --git a/documentation/contents.txt → documentation/contents.rst b/documentation/contents.txt → documentation/contents.rst
diff --git a/documentation/design.txt → documentation/design.rst b/documentation/design.txt → documentation/design.rst
diff --git a/documentation/glossary.txt → documentation/glossary.rst b/documentation/glossary.txt → documentation/glossary.rst
diff --git a/documentation/introduction.txt → documentation/introduction.rst b/documentation/introduction.txt → documentation/introduction.rst
diff --git a/documentation/manual.txt → documentation/manual.rst b/documentation/manual.txt → documentation/manual.rst
diff --git a/documentation/numerical/discret.txt → documentation/numerical/discret.rst b/documentation/numerical/discret.txt → documentation/numerical/discret.rst
diff --git a/documentation/numerical/equation.txt → documentation/numerical/equation.rst b/documentation/numerical/equation.txt → documentation/numerical/equation.rst
diff --git a/documentation/numerical/index.txt → documentation/numerical/index.rst b/documentation/numerical/index.txt → documentation/numerical/index.rst
diff --git a/documentation/numerical/scheme.txt → documentation/numerical/scheme.rst b/documentation/numerical/scheme.txt → documentation/numerical/scheme.rst
diff --git a/documentation/references-latex.txt → documentation/references-latex.rst b/documentation/references-latex.txt → documentation/references-latex.rst
diff --git a/documentation/references.txt → documentation/references.rst b/documentation/references.txt → documentation/references.rst
diff --git a/documentation/tutorial/index.txt → documentation/tutorial/index.rst b/documentation/tutorial/index.txt → documentation/tutorial/index.rst
diff --git a/examples/README.txt → examples/README.rst b/examples/README.txt → examples/README.rst
diff --git a/examples/cahnHilliard/generated/.gitignore b/examples/cahnHilliard/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/examples/cahnHilliard/index.txt → examples/cahnHilliard/index.rst b/examples/cahnHilliard/index.txt → examples/cahnHilliard/index.rst
diff --git a/examples/convection/index.txt → examples/convection/index.rst b/examples/convection/index.txt → examples/convection/index.rst
diff --git a/examples/diffusion/generated/.gitignore b/examples/diffusion/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/examples/diffusion/index.txt → examples/diffusion/index.rst b/examples/diffusion/index.txt → examples/diffusion/index.rst
diff --git a/examples/flow/generated/.gitignore b/examples/flow/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/examples/flow/index.txt → examples/flow/index.rst b/examples/flow/index.txt → examples/flow/index.rst
diff --git a/examples/levelSet/electroChem/README.txt → examples/levelSet/electroChem/README.rst b/examples/levelSet/electroChem/README.txt → examples/levelSet/electroChem/README.rst
diff --git a/examples/levelSet/generated/.gitignore b/examples/levelSet/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/examples/levelSet/index.txt → examples/levelSet/index.rst b/examples/levelSet/index.txt → examples/levelSet/index.rst
diff --git a/examples/phase/generated/.gitignore b/examples/phase/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/examples/phase/index.txt → examples/phase/index.rst b/examples/phase/index.txt → examples/phase/index.rst
diff --git a/examples/reactiveWetting/index.txt → examples/reactiveWetting/index.rst b/examples/reactiveWetting/index.txt → examples/reactiveWetting/index.rst
diff --git a/examples/updating/index.txt → examples/updating/index.rst b/examples/updating/index.txt → examples/updating/index.rst
diff --git a/fipy/generated/.gitignore b/fipy/generated/.gitignore
@@ -1 +1 @@
-*.txt
+*.rst
diff --git a/fipy/meshes/cylindricalNonUniformGrid1D.py b/fipy/meshes/cylindricalNonUniformGrid1D.py
@@ -118,7 +118,7 @@ def _test(self):
             >>> var = CellVariable(mesh=mesh)
             >>> DiffusionTerm().solve(var)
 
-        This test is for http://matforge.org/fipy/ticket/513. Cell
+        This test is for https://github.com/usnistgov/fipy/issues/372. Cell
         volumes were being returned as binOps rather than arrays.
 
             >>> m = CylindricalNonUniformGrid1D(dx=(1., 2., 3., 4.), nx=4)

diff --git a/fipy/meshes/cylindricalNonUniformGrid2D.py b/fipy/meshes/cylindricalNonUniformGrid2D.py
@@ -288,7 +288,7 @@ def _test(self):
             >>> print fp.CellVariable(mesh=mesh, value=mesh.cellVolumes).globalValue
             [ 1.5  6. ]
 
-        This test is for http://matforge.org/fipy/ticket/513. Cell
+        This test is for https://github.com/usnistgov/fipy/issues/372. Cell
         volumes were being returned as binOps rather than arrays.
 
             >>> m = CylindricalNonUniformGrid2D(dx=(1., 2.), dy=(1., 2.))
@@ -302,7 +302,7 @@ def _test(self):
             >>> print isinstance(fp.CellVariable(mesh=m).arithmeticFaceValue.divergence.value, numerix.ndarray)
             True
 
-        Test for http://matforge.org/fipy/ticket/650. exteriorFaces were
+        Test for https://github.com/usnistgov/fipy/issues/393. exteriorFaces were
         ndarrays rather than FaceVariables.
 
             >>> print isinstance(m.facesTop, fp.FaceVariable)

diff --git a/fipy/meshes/cylindricalUniformGrid1D.py b/fipy/meshes/cylindricalUniformGrid1D.py
@@ -96,7 +96,7 @@ def _test(self):
             >>> var = CellVariable(mesh=mesh)
             >>> DiffusionTerm().solve(var)
 
-        This test is for http://matforge.org/fipy/ticket/513. Cell
+        This test is for https://github.com/usnistgov/fipy/issues/372. Cell
         volumes were being returned as binOps rather than arrays.
 
             >>> m = CylindricalUniformGrid1D(dx=1., nx=4)

diff --git a/fipy/meshes/cylindricalUniformGrid2D.py b/fipy/meshes/cylindricalUniformGrid2D.py
@@ -312,7 +312,7 @@ def _test(self):
             >>> var = CellVariable(mesh=mesh)
             >>> DiffusionTerm().solve(var, solver=DummySolver())
 
-        This test is for http://matforge.org/fipy/ticket/513. Cell
+        This test is for https://github.com/usnistgov/fipy/issues/372. Cell
         volumes were being returned as binOps rather than arrays.
 
             >>> m = CylindricalUniformGrid2D(dx=1., dy=1, nx=4, ny=4)

diff --git a/fipy/meshes/nonUniformGrid1D.py b/fipy/meshes/nonUniformGrid1D.py
@@ -118,7 +118,7 @@ def _test(self):
             >>> var = CellVariable(mesh=mesh)
             >>> DiffusionTerm().solve(var, solver=DummySolver())
 
-        Test for ticket http://matforge.org/fipy/ticket/490.
+        Test for ticket https://github.com/usnistgov/fipy/issues/364.
 
             >>> from fipy.meshes.nonUniformGrid1D import NonUniformGrid1D
             >>> m = NonUniformGrid1D(nx=9, overlap=1)

diff --git a/fipy/meshes/nonUniformGrid2D.py b/fipy/meshes/nonUniformGrid2D.py
@@ -266,7 +266,7 @@ def _test(self):
             >>> print numerix.allclose(mesh.cellCenters, unpickledMesh.cellCenters)
             True
 
-        Test for http://matforge.org/fipy/ticket/490.
+        Test for https://github.com/usnistgov/fipy/issues/364.
 
             >>> from fipy.meshes.nonUniformGrid2D import NonUniformGrid2D
             >>> m = NonUniformGrid2D(nx=1, ny=9, overlap=1)

diff --git a/fipy/meshes/nonUniformGrid3D.py b/fipy/meshes/nonUniformGrid3D.py
@@ -389,7 +389,7 @@ def _test(self):
             >>> NonUniformGrid3D(nx=2, ny=2, nz=2, dx=(1., 2.), dy=(1., 2.), dz=(1., 2.))
             NonUniformGrid3D(dx=(1.0, 2.0), nx=2, dy=(1.0, 2.0), ny=2, dz=(1.0, 2.0), nz=2)
 
-        Test for http://matforge.org/fipy/ticket/490.
+        Test for https://github.com/usnistgov/fipy/issues/364.
 
             >>> from fipy.meshes.nonUniformGrid3D import NonUniformGrid3D
             >>> m = NonUniformGrid3D(nx=1, ny=1, nz=9, overlap=1)

diff --git a/fipy/tools/__init__.py b/fipy/tools/__init__.py
@@ -49,7 +49,7 @@ def _parallelImport():
             try:
                 from mpi4py import MPI
             except ImportError:
-                raise Exception("Could not import mpi4py. The package mpi4py is a required package if you are using Trilinos on a Debian platform with Trilinos version 10.0.4 due to a Trilinos bug (see <http://matforge.org/fipy/ticket/420>). Try installing using 'easy_install mpi4py'.")
+                raise Exception("Could not import mpi4py. The package mpi4py is a required package if you are using Trilinos on a Debian platform with Trilinos version 10.0.4 due to a Trilinos bug (see <https://github.com/usnistgov/fipy/issues/301>). Try installing using 'easy_install mpi4py'.")
 
     from fipy.tools.comms.commWrapper import ParallelCommWrapper
     parallelComm = ParallelCommWrapper(Epetra=Epetra)