diff --git a/docs/ECFLOW_NCO b/docs/ECFLOW_NCO new file mode 100644 index 0000000000..b60c3210f7 --- /dev/null +++ b/docs/ECFLOW_NCO @@ -0,0 +1,28 @@ +The condition of the current AQM package production/AQM.v7 #cf184119b. + +The package is currently under develop. Not ready for NCO code delivery. +This document is subject to be changed every time the production/AQM.v7 package update. + +Background: +This is the code delivery instruction for NCO SPA team. It outlines the ecflow workflow and condition of using it on the current AQM package. + +The following condition have impact to the configuration of the ecflow workflow: +- Forecast restart does not reproduce: + ECF_TRIES should be set to 1. + The RESTART directory under the COM and the DATA directory of the failed forecast job need to be removed before a rerun can be started. +- The executable gefs2lbc_para used by job aqm_lbcs unstable. It unpredictably failed sometimes during execution: + ECF_TRIES should be set to 2. +- There are four jobs that write output in its DATA location for other jobs to access. Therefore these four jobs can not remove the DATA when the job is completed. There are nexus_gfs_sfc, forecast, get_extrn_ics, and get_extrn_lbcs: + These four jobs will not use the NCO's KEEPDATA clean up procedure. + The AQM ecflow workflow has a dedicated job data_cleanup to do the DATA cleaning for these four jobs. + +NCO ECFLOW setup steps: +(1) Configure ecflow include files to use AQM version identified in $HOMEaqm/versions/run.ver +(2) Modify ecflow definition file with NCO production time based trigger as needed. +(3) Add ecflow suite to NCO ECFLOW test suite. +(4) Create AQM COM, AQM bias correction output location +(5) Copy ICS from EMC AQM developer to AQM COM +(6) Copy AQM bias data from EMC AQM developer to AQM bias correction output location. +(7) Setup PDY +(8) Start AQM ecflow workflow jobs + diff --git a/ecf/defs/aqm-cycled.def b/ecf/defs/aqm-cycled.def new file mode 100644 index 0000000000..89ec7b93d1 --- /dev/null +++ b/ecf/defs/aqm-cycled.def @@ -0,0 +1,818 @@ +extern /totality_limit:TOTALITY +extern /cycled_v16_3/primary/00/gfs/v16.3/gfs/jgfs_forecast +extern /cycled_v16_3/primary/06/gfs/v16.3/gfs/jgfs_forecast +extern /cycled_v16_3/primary/12/gfs/v16.3/gfs/jgfs_forecast +extern /cycled_v16_3/primary/18/gfs/v16.3/gfs/jgfs_forecast + +suite emc_aqm + inlimit /totality_limit:TOTALITY + family primary + edit aqm_ver 'v7.0.46' + edit PACKAGEHOME '/lfs/h2/emc/global/noscrub/%EMC_USER%/para/packages/aqm.%aqm_ver%' + edit NET 'aqm' + edit RUN 'aqm' + edit PROJ 'AQM' + edit PROJENVIR 'DEV' + edit MACHINE_SITE 'development' + edit ENVIR 'prod' + edit QUEUE 'dev' + edit QUEUE_ARCH 'dev_transfer' + edit OUTPUTDIR '/lfs/h2/emc/ptmp/%EMC_USER%/ecflow_aqm/para/output/prod/today' + family 00 + edit CYC '00' + family aqm + family v1.0 + edit ECF_FILES '%PACKAGEHOME%/ecf/scripts' + family nexus + task jnexus_gfs_sfc + trigger /cycled_v16_3/primary/18/gfs/v16.3/gfs/jgfs_forecast==complete or ../../../../18/aqm/v1.0/aqm_manager/aqm_manager:release_next_cycle + # NCO replace with time based trigger + task jnexus_emission_00 + edit NSPT '00' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_01 + edit NSPT '01' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_02 + edit NSPT '02' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_03 + edit NSPT '03' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_04 + edit NSPT '04' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_05 + edit NSPT '05' + trigger ./jnexus_gfs_sfc==complete + task jnexus_post_split + trigger ./jnexus_emission_00==complete and ./jnexus_emission_01==complete and ./jnexus_emission_02==complete + endfamily + family prep + task jget_extrn_ics + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jget_extrn_lbcs + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jmake_ics + trigger ./jget_extrn_ics==complete + task jmake_lbcs + trigger ./jget_extrn_lbcs==complete + task jics + trigger ./jmake_ics==complete + task jlbcs + trigger ./jmake_lbcs==complete + endfamily + family pts_fire_emis + task jpoint_source + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jfire_emission + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + endfamily + family forecast + task jforecast + trigger ../nexus==complete and ../prep==complete and ../pts_fire_emis==complete + endfamily + family post + task jpost_f000 + edit FHR '000' + trigger ../forecast==complete + task jpost_f001 + edit FHR '001' + trigger ../forecast==complete + task jpost_f002 + edit FHR '002' + trigger ../forecast==complete + task jpost_f003 + edit FHR '003' + trigger ../forecast==complete + task jpost_f004 + edit FHR '004' + trigger ../forecast==complete + task jpost_f005 + edit FHR '005' + trigger ../forecast==complete + task jpost_f006 + edit FHR '006' + trigger ../forecast==complete + endfamily + family product + task jpre_post_stat + trigger ../forecast==complete + task jpost_stat_o3 + trigger ./jpre_post_stat==complete + task jpost_stat_pm25 + trigger ./jpre_post_stat==complete + task jbias_correction_o3 + trigger ./jpre_post_stat==complete + task jbias_correction_pm25 + trigger ./jpre_post_stat==complete + endfamily + family aqm_manager + task aqm_manager + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + event 1 release_next_cycle + event 2 requeue_cycle + task data_cleanup + trigger ../forecast==complete + endfamily + endfamily # v1.0 + endfamily # aqm + endfamily # 00 + family 06 + edit CYC '06' + family aqm + family v1.0 + edit ECF_FILES '%PACKAGEHOME%/ecf/scripts' + family nexus + task jnexus_gfs_sfc + trigger /cycled_v16_3/primary/18/gfs/v16.3/gfs/jgfs_forecast==complete or ../../../../00/aqm/v1.0/aqm_manager/aqm_manager:release_next_cycle + # NCO replace with time based trigger + task jnexus_emission_00 + edit NSPT '00' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_01 + edit NSPT '01' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_02 + edit NSPT '02' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_03 + edit NSPT '03' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_04 + edit NSPT '04' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_05 + edit NSPT '05' + trigger ./jnexus_gfs_sfc==complete + task jnexus_post_split + trigger ./jnexus_emission_00==complete and ./jnexus_emission_01==complete and ./jnexus_emission_02==complete + endfamily + family prep + task jget_extrn_ics + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jget_extrn_lbcs + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jmake_ics + trigger ./jget_extrn_ics==complete + task jmake_lbcs + trigger ./jget_extrn_lbcs==complete + task jics + trigger ./jmake_ics==complete + task jlbcs + trigger ./jmake_lbcs==complete + endfamily + family pts_fire_emis + task jpoint_source + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jfire_emission + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + endfamily + family forecast + task jforecast + trigger ../nexus==complete and ../prep==complete and ../pts_fire_emis==complete + endfamily + family post + task jpost_f000 + edit FHR '000' + trigger ../forecast==complete + task jpost_f001 + edit FHR '001' + trigger ../forecast==complete + task jpost_f002 + edit FHR '002' + trigger ../forecast==complete + task jpost_f003 + edit FHR '003' + trigger ../forecast==complete + task jpost_f004 + edit FHR '004' + trigger ../forecast==complete + task jpost_f005 + edit FHR '005' + trigger ../forecast==complete + task jpost_f006 + edit FHR '006' + trigger ../forecast==complete + task jpost_f007 + edit FHR '007' + trigger ../forecast==complete + task jpost_f008 + edit FHR '008' + trigger ../forecast==complete + task jpost_f009 + edit FHR '009' + trigger ../forecast==complete + task jpost_f010 + edit FHR '010' + trigger ../forecast==complete + task jpost_f011 + edit FHR '011' + trigger ../forecast==complete + task jpost_f012 + edit FHR '012' + trigger ../forecast==complete + task jpost_f013 + edit FHR '013' + trigger ../forecast==complete + task jpost_f014 + edit FHR '014' + trigger ../forecast==complete + task jpost_f015 + edit FHR '015' + trigger ../forecast==complete + task jpost_f016 + edit FHR '016' + trigger ../forecast==complete + task jpost_f017 + edit FHR '017' + trigger ../forecast==complete + task jpost_f018 + edit FHR '018' + trigger ../forecast==complete + task jpost_f019 + edit FHR '019' + trigger ../forecast==complete + task jpost_f020 + edit FHR '020' + trigger ../forecast==complete + task jpost_f021 + edit FHR '021' + trigger ../forecast==complete + task jpost_f022 + edit FHR '022' + trigger ../forecast==complete + task jpost_f023 + edit FHR '023' + trigger ../forecast==complete + task jpost_f024 + edit FHR '024' + trigger ../forecast==complete + task jpost_f025 + edit FHR '025' + trigger ../forecast==complete + task jpost_f026 + edit FHR '026' + trigger ../forecast==complete + task jpost_f027 + edit FHR '027' + trigger ../forecast==complete + task jpost_f028 + edit FHR '028' + trigger ../forecast==complete + task jpost_f029 + edit FHR '029' + trigger ../forecast==complete + task jpost_f030 + edit FHR '030' + trigger ../forecast==complete + task jpost_f031 + edit FHR '031' + trigger ../forecast==complete + task jpost_f032 + edit FHR '032' + trigger ../forecast==complete + task jpost_f033 + edit FHR '033' + trigger ../forecast==complete + task jpost_f034 + edit FHR '034' + trigger ../forecast==complete + task jpost_f035 + edit FHR '035' + trigger ../forecast==complete + task jpost_f036 + edit FHR '036' + trigger ../forecast==complete + task jpost_f037 + edit FHR '037' + trigger ../forecast==complete + task jpost_f038 + edit FHR '038' + trigger ../forecast==complete + task jpost_f039 + edit FHR '039' + trigger ../forecast==complete + task jpost_f040 + edit FHR '040' + trigger ../forecast==complete + task jpost_f041 + edit FHR '041' + trigger ../forecast==complete + task jpost_f042 + edit FHR '042' + trigger ../forecast==complete + task jpost_f043 + edit FHR '043' + trigger ../forecast==complete + task jpost_f044 + edit FHR '044' + trigger ../forecast==complete + task jpost_f045 + edit FHR '045' + trigger ../forecast==complete + task jpost_f046 + edit FHR '046' + trigger ../forecast==complete + task jpost_f047 + edit FHR '047' + trigger ../forecast==complete + task jpost_f048 + edit FHR '048' + trigger ../forecast==complete + task jpost_f049 + edit FHR '049' + trigger ../forecast==complete + task jpost_f050 + edit FHR '050' + trigger ../forecast==complete + task jpost_f051 + edit FHR '051' + trigger ../forecast==complete + task jpost_f052 + edit FHR '052' + trigger ../forecast==complete + task jpost_f053 + edit FHR '053' + trigger ../forecast==complete + task jpost_f054 + edit FHR '054' + trigger ../forecast==complete + task jpost_f055 + edit FHR '055' + trigger ../forecast==complete + task jpost_f056 + edit FHR '056' + trigger ../forecast==complete + task jpost_f057 + edit FHR '057' + trigger ../forecast==complete + task jpost_f058 + edit FHR '058' + trigger ../forecast==complete + task jpost_f059 + edit FHR '059' + trigger ../forecast==complete + task jpost_f060 + edit FHR '060' + trigger ../forecast==complete + task jpost_f061 + edit FHR '061' + trigger ../forecast==complete + task jpost_f062 + edit FHR '062' + trigger ../forecast==complete + task jpost_f063 + edit FHR '063' + trigger ../forecast==complete + task jpost_f064 + edit FHR '064' + trigger ../forecast==complete + task jpost_f065 + edit FHR '065' + trigger ../forecast==complete + task jpost_f066 + edit FHR '066' + trigger ../forecast==complete + task jpost_f067 + edit FHR '067' + trigger ../forecast==complete + task jpost_f068 + edit FHR '068' + trigger ../forecast==complete + task jpost_f069 + edit FHR '069' + trigger ../forecast==complete + task jpost_f070 + edit FHR '070' + trigger ../forecast==complete + task jpost_f071 + edit FHR '071' + trigger ../forecast==complete + task jpost_f072 + edit FHR '072' + trigger ../forecast==complete + endfamily + family product + task jpre_post_stat + trigger ../forecast==complete + task jpost_stat_o3 + trigger ./jpre_post_stat==complete + task jpost_stat_pm25 + trigger ./jpre_post_stat==complete + task jbias_correction_o3 + trigger ./jpre_post_stat==complete + task jbias_correction_pm25 + trigger ./jpre_post_stat==complete + endfamily + family aqm_manager + task aqm_manager + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + event 1 release_next_cycle + event 2 requeue_cycle + task data_cleanup + trigger ../forecast==complete + endfamily + endfamily # v1.0 + endfamily # aqm + endfamily # 06 + family 12 + edit CYC '12' + family aqm + family v1.0 + edit ECF_FILES '%PACKAGEHOME%/ecf/scripts' + family nexus + task jnexus_gfs_sfc + trigger /cycled_v16_3/primary/18/gfs/v16.3/gfs/jgfs_forecast==complete or ../../../../06/aqm/v1.0/aqm_manager/aqm_manager:release_next_cycle + # NCO replace with time based trigger + task jnexus_emission_00 + edit NSPT '00' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_01 + edit NSPT '01' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_02 + edit NSPT '02' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_03 + edit NSPT '03' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_04 + edit NSPT '04' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_05 + edit NSPT '05' + trigger ./jnexus_gfs_sfc==complete + task jnexus_post_split + trigger ./jnexus_emission_00==complete and ./jnexus_emission_01==complete and ./jnexus_emission_02==complete + endfamily + family prep + task jget_extrn_ics + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jget_extrn_lbcs + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jmake_ics + trigger ./jget_extrn_ics==complete + task jmake_lbcs + trigger ./jget_extrn_lbcs==complete + task jics + trigger ./jmake_ics==complete + task jlbcs + trigger ./jmake_lbcs==complete + endfamily + family pts_fire_emis + task jpoint_source + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jfire_emission + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + endfamily + family forecast + task jforecast + trigger ../nexus==complete and ../prep==complete and ../pts_fire_emis==complete + endfamily + family post + task jpost_f000 + edit FHR '000' + trigger ../forecast==complete + task jpost_f001 + edit FHR '001' + trigger ../forecast==complete + task jpost_f002 + edit FHR '002' + trigger ../forecast==complete + task jpost_f003 + edit FHR '003' + trigger ../forecast==complete + task jpost_f004 + edit FHR '004' + trigger ../forecast==complete + task jpost_f005 + edit FHR '005' + trigger ../forecast==complete + task jpost_f006 + edit FHR '006' + trigger ../forecast==complete + task jpost_f007 + edit FHR '007' + trigger ../forecast==complete + task jpost_f008 + edit FHR '008' + trigger ../forecast==complete + task jpost_f009 + edit FHR '009' + trigger ../forecast==complete + task jpost_f010 + edit FHR '010' + trigger ../forecast==complete + task jpost_f011 + edit FHR '011' + trigger ../forecast==complete + task jpost_f012 + edit FHR '012' + trigger ../forecast==complete + task jpost_f013 + edit FHR '013' + trigger ../forecast==complete + task jpost_f014 + edit FHR '014' + trigger ../forecast==complete + task jpost_f015 + edit FHR '015' + trigger ../forecast==complete + task jpost_f016 + edit FHR '016' + trigger ../forecast==complete + task jpost_f017 + edit FHR '017' + trigger ../forecast==complete + task jpost_f018 + edit FHR '018' + trigger ../forecast==complete + task jpost_f019 + edit FHR '019' + trigger ../forecast==complete + task jpost_f020 + edit FHR '020' + trigger ../forecast==complete + task jpost_f021 + edit FHR '021' + trigger ../forecast==complete + task jpost_f022 + edit FHR '022' + trigger ../forecast==complete + task jpost_f023 + edit FHR '023' + trigger ../forecast==complete + task jpost_f024 + edit FHR '024' + trigger ../forecast==complete + task jpost_f025 + edit FHR '025' + trigger ../forecast==complete + task jpost_f026 + edit FHR '026' + trigger ../forecast==complete + task jpost_f027 + edit FHR '027' + trigger ../forecast==complete + task jpost_f028 + edit FHR '028' + trigger ../forecast==complete + task jpost_f029 + edit FHR '029' + trigger ../forecast==complete + task jpost_f030 + edit FHR '030' + trigger ../forecast==complete + task jpost_f031 + edit FHR '031' + trigger ../forecast==complete + task jpost_f032 + edit FHR '032' + trigger ../forecast==complete + task jpost_f033 + edit FHR '033' + trigger ../forecast==complete + task jpost_f034 + edit FHR '034' + trigger ../forecast==complete + task jpost_f035 + edit FHR '035' + trigger ../forecast==complete + task jpost_f036 + edit FHR '036' + trigger ../forecast==complete + task jpost_f037 + edit FHR '037' + trigger ../forecast==complete + task jpost_f038 + edit FHR '038' + trigger ../forecast==complete + task jpost_f039 + edit FHR '039' + trigger ../forecast==complete + task jpost_f040 + edit FHR '040' + trigger ../forecast==complete + task jpost_f041 + edit FHR '041' + trigger ../forecast==complete + task jpost_f042 + edit FHR '042' + trigger ../forecast==complete + task jpost_f043 + edit FHR '043' + trigger ../forecast==complete + task jpost_f044 + edit FHR '044' + trigger ../forecast==complete + task jpost_f045 + edit FHR '045' + trigger ../forecast==complete + task jpost_f046 + edit FHR '046' + trigger ../forecast==complete + task jpost_f047 + edit FHR '047' + trigger ../forecast==complete + task jpost_f048 + edit FHR '048' + trigger ../forecast==complete + task jpost_f049 + edit FHR '049' + trigger ../forecast==complete + task jpost_f050 + edit FHR '050' + trigger ../forecast==complete + task jpost_f051 + edit FHR '051' + trigger ../forecast==complete + task jpost_f052 + edit FHR '052' + trigger ../forecast==complete + task jpost_f053 + edit FHR '053' + trigger ../forecast==complete + task jpost_f054 + edit FHR '054' + trigger ../forecast==complete + task jpost_f055 + edit FHR '055' + trigger ../forecast==complete + task jpost_f056 + edit FHR '056' + trigger ../forecast==complete + task jpost_f057 + edit FHR '057' + trigger ../forecast==complete + task jpost_f058 + edit FHR '058' + trigger ../forecast==complete + task jpost_f059 + edit FHR '059' + trigger ../forecast==complete + task jpost_f060 + edit FHR '060' + trigger ../forecast==complete + task jpost_f061 + edit FHR '061' + trigger ../forecast==complete + task jpost_f062 + edit FHR '062' + trigger ../forecast==complete + task jpost_f063 + edit FHR '063' + trigger ../forecast==complete + task jpost_f064 + edit FHR '064' + trigger ../forecast==complete + task jpost_f065 + edit FHR '065' + trigger ../forecast==complete + task jpost_f066 + edit FHR '066' + trigger ../forecast==complete + task jpost_f067 + edit FHR '067' + trigger ../forecast==complete + task jpost_f068 + edit FHR '068' + trigger ../forecast==complete + task jpost_f069 + edit FHR '069' + trigger ../forecast==complete + task jpost_f070 + edit FHR '070' + trigger ../forecast==complete + task jpost_f071 + edit FHR '071' + trigger ../forecast==complete + task jpost_f072 + edit FHR '072' + trigger ../forecast==complete + endfamily + family product + task jpre_post_stat + trigger ../forecast==complete + task jpost_stat_o3 + trigger ./jpre_post_stat==complete + task jpost_stat_pm25 + trigger ./jpre_post_stat==complete + task jbias_correction_o3 + trigger ./jpre_post_stat==complete + task jbias_correction_pm25 + trigger ./jpre_post_stat==complete + endfamily + family aqm_manager + task aqm_manager + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + event 1 release_next_cycle + event 2 requeue_cycle + task data_cleanup + trigger ../forecast==complete + endfamily + endfamily # v1.0 + endfamily # aqm + endfamily # 12 + family 18 + edit CYC '18' + family aqm + family v1.0 + edit ECF_FILES '%PACKAGEHOME%/ecf/scripts' + family nexus + task jnexus_gfs_sfc + trigger /cycled_v16_3/primary/18/gfs/v16.3/gfs/jgfs_forecast==complete or ../../../../12/aqm/v1.0/aqm_manager/aqm_manager:release_next_cycle + # NCO replace with time based trigger + task jnexus_emission_00 + edit NSPT '00' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_01 + edit NSPT '01' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_02 + edit NSPT '02' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_03 + edit NSPT '03' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_04 + edit NSPT '04' + trigger ./jnexus_gfs_sfc==complete + task jnexus_emission_05 + edit NSPT '05' + trigger ./jnexus_gfs_sfc==complete + task jnexus_post_split + trigger ./jnexus_emission_00==complete and ./jnexus_emission_01==complete and ./jnexus_emission_02==complete + endfamily + family prep + task jget_extrn_ics + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jget_extrn_lbcs + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jmake_ics + trigger ./jget_extrn_ics==complete + task jmake_lbcs + trigger ./jget_extrn_lbcs==complete + task jics + trigger ./jmake_ics==complete + task jlbcs + trigger ./jmake_lbcs==complete + endfamily + family pts_fire_emis + task jpoint_source + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + task jfire_emission + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + endfamily + family forecast + task jforecast + trigger ../nexus==complete and ../prep==complete and ../pts_fire_emis==complete + endfamily + family post + task jpost_f000 + edit FHR '000' + trigger ../forecast==complete + task jpost_f001 + edit FHR '001' + trigger ../forecast==complete + task jpost_f002 + edit FHR '002' + trigger ../forecast==complete + task jpost_f003 + edit FHR '003' + trigger ../forecast==complete + task jpost_f004 + edit FHR '004' + trigger ../forecast==complete + task jpost_f005 + edit FHR '005' + trigger ../forecast==complete + task jpost_f006 + edit FHR '006' + trigger ../forecast==complete + endfamily + family product + task jpre_post_stat + trigger ../forecast==complete + task jpost_stat_o3 + trigger ./jpre_post_stat==complete + task jpost_stat_pm25 + trigger ./jpre_post_stat==complete + task jbias_correction_o3 + trigger ./jpre_post_stat==complete + task jbias_correction_pm25 + trigger ./jpre_post_stat==complete + endfamily + family aqm_manager + task aqm_manager + trigger ../nexus/jnexus_gfs_sfc==active or ../nexus/jnexus_gfs_sfc==complete + event 1 release_next_cycle + event 2 requeue_cycle + task data_cleanup + trigger ../forecast==complete + endfamily + endfamily # v1.0 + endfamily # aqm + endfamily # 18 + endfamily # primary +endsuite diff --git a/ecf/scripts/aqm_manager/aqm_manager.ecf b/ecf/scripts/aqm_manager/aqm_manager.ecf new file mode 100644 index 0000000000..5759fda05d --- /dev/null +++ b/ecf/scripts/aqm_manager/aqm_manager.ecf @@ -0,0 +1,31 @@ +#PBS -N %RUN%_aqm_manager_%CYC% +#PBS -j oe +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=06:00:00 +#PBS -l select=1:ncpus=1:mem=1GB +#PBS -l place=vscatter +#PBS -l debug=true + +model=aqm +%include +%include + +############################################################ +# Load modules +############################################################ + +module list + +export cyc=%CYC% +export cycle=t${cyc}z + +############################################################ +# CALL executable job script here +############################################################ +${HOMEaqm}/jobs/JAQM_MANAGER + +%include +%manual + +%end diff --git a/ecf/scripts/aqm_manager/data_cleanup.ecf b/ecf/scripts/aqm_manager/data_cleanup.ecf new file mode 100644 index 0000000000..7cf558ce86 --- /dev/null +++ b/ecf/scripts/aqm_manager/data_cleanup.ecf @@ -0,0 +1,31 @@ +#PBS -N %RUN%_data_cleanup_%CYC% +#PBS -j oe +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=06:00:00 +#PBS -l select=1:ncpus=1:mem=1GB +#PBS -l place=vscatter +#PBS -l debug=true + +model=aqm +%include +%include + +############################################################ +# Load modules +############################################################ + +module list + +export cyc=%CYC% +export cycle=t${cyc}z + +############################################################ +# CALL executable job script here +############################################################ +${HOMEaqm}/jobs/JDATA_CLEANUP + +%include +%manual + +%end diff --git a/ecf/scripts/forecast/jforecast.ecf b/ecf/scripts/forecast/jforecast.ecf new file mode 100755 index 0000000000..1a398d745b --- /dev/null +++ b/ecf/scripts/forecast/jforecast.ecf @@ -0,0 +1,47 @@ +#PBS -N aqm_forecast_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=04:00:00 +#PBS -l select=14:mpiprocs=128:ompthreads=1:ncpus=128 +#PBS -l place=vscatter:exclhost +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load esmf/${esmf_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load pio/${pio_ver} +module load crtm/${crtm_ver} +module load g2/${g2_ver} +module load g2tmpl/${g2tmpl_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export share_pid="${PDY}${cyc}" + +${HOMEaqm}/jobs/JREGIONAL_RUN_FCST + +%include + +%manual +%end diff --git a/ecf/scripts/nexus/jnexus_emission.ecf b/ecf/scripts/nexus/jnexus_emission.ecf new file mode 100755 index 0000000000..0f2464ec52 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission.ecf @@ -0,0 +1,44 @@ +#PBS -N aqm_nexus_emission_%NSPT%_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=01:00:00 +#PBS -l select=4:mpiprocs=64:ompthreads=2:ncpus=128 +#PBS -l place=vscatter:exclhost +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load esmf/${esmf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export nspt="%NSPT%" +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export DCOMINfire=/lfs/h2/emc/physics/noscrub/kai.wang/RAVE_fire/RAVE_NA_NRT + +${HOMEaqm}/jobs/JREGIONAL_NEXUS_EMISSION + +%include + +%manual +%end diff --git a/ecf/scripts/nexus/jnexus_emission_00.ecf b/ecf/scripts/nexus/jnexus_emission_00.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_00.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_emission_01.ecf b/ecf/scripts/nexus/jnexus_emission_01.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_01.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_emission_02.ecf b/ecf/scripts/nexus/jnexus_emission_02.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_02.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_emission_03.ecf b/ecf/scripts/nexus/jnexus_emission_03.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_03.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_emission_04.ecf b/ecf/scripts/nexus/jnexus_emission_04.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_04.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_emission_05.ecf b/ecf/scripts/nexus/jnexus_emission_05.ecf new file mode 120000 index 0000000000..52da48c701 --- /dev/null +++ b/ecf/scripts/nexus/jnexus_emission_05.ecf @@ -0,0 +1 @@ +jnexus_emission.ecf \ No newline at end of file diff --git a/ecf/scripts/nexus/jnexus_gfs_sfc.ecf b/ecf/scripts/nexus/jnexus_gfs_sfc.ecf new file mode 100755 index 0000000000..e70ba72ced --- /dev/null +++ b/ecf/scripts/nexus/jnexus_gfs_sfc.ecf @@ -0,0 +1,35 @@ +#PBS -N aqm_nexus_gfs_sfc_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export COMINgfs=$(compath.py ${envir}/gfs/${gfs_ver}) +export share_pid="${PDY}${cyc}" + +${HOMEaqm}/jobs/JREGIONAL_NEXUS_GFS_SFC + +%include + +%manual +%end diff --git a/ecf/scripts/nexus/jnexus_post_split.ecf b/ecf/scripts/nexus/jnexus_post_split.ecf new file mode 100755 index 0000000000..70717a358d --- /dev/null +++ b/ecf/scripts/nexus/jnexus_post_split.ecf @@ -0,0 +1,41 @@ +#PBS -N aqm_nexus_post_split_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load esmf/${esmf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) + +${HOMEaqm}/jobs/JREGIONAL_NEXUS_POST_SPLIT + +%include + +%manual +%end diff --git a/ecf/scripts/post/jpost.ecf b/ecf/scripts/post/jpost.ecf new file mode 100755 index 0000000000..2abe7d62f7 --- /dev/null +++ b/ecf/scripts/post/jpost.ecf @@ -0,0 +1,41 @@ +#PBS -N aqm_post_%FHR%_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:15:00 +#PBS -l select=2:mpiprocs=24:ncpus=24 +#PBS -l place=vscatter:exclhost +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load libjpeg/${libjpeg_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export fhr="%FHR%" +export DATAFCST=$DATAROOT/${model}_forecast_${cyc}.${PDY}${cyc} + +${HOMEaqm}/jobs/JREGIONAL_RUN_POST + +%include + +%manual +%end diff --git a/ecf/scripts/post/jpost_f000.ecf b/ecf/scripts/post/jpost_f000.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f000.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f001.ecf b/ecf/scripts/post/jpost_f001.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f001.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f002.ecf b/ecf/scripts/post/jpost_f002.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f002.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f003.ecf b/ecf/scripts/post/jpost_f003.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f003.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f004.ecf b/ecf/scripts/post/jpost_f004.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f004.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f005.ecf b/ecf/scripts/post/jpost_f005.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f005.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f006.ecf b/ecf/scripts/post/jpost_f006.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f006.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f007.ecf b/ecf/scripts/post/jpost_f007.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f007.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f008.ecf b/ecf/scripts/post/jpost_f008.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f008.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f009.ecf b/ecf/scripts/post/jpost_f009.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f009.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f010.ecf b/ecf/scripts/post/jpost_f010.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f010.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f011.ecf b/ecf/scripts/post/jpost_f011.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f011.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f012.ecf b/ecf/scripts/post/jpost_f012.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f012.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f013.ecf b/ecf/scripts/post/jpost_f013.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f013.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f014.ecf b/ecf/scripts/post/jpost_f014.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f014.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f015.ecf b/ecf/scripts/post/jpost_f015.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f015.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f016.ecf b/ecf/scripts/post/jpost_f016.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f016.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f017.ecf b/ecf/scripts/post/jpost_f017.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f017.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f018.ecf b/ecf/scripts/post/jpost_f018.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f018.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f019.ecf b/ecf/scripts/post/jpost_f019.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f019.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f020.ecf b/ecf/scripts/post/jpost_f020.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f020.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f021.ecf b/ecf/scripts/post/jpost_f021.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f021.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f022.ecf b/ecf/scripts/post/jpost_f022.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f022.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f023.ecf b/ecf/scripts/post/jpost_f023.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f023.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f024.ecf b/ecf/scripts/post/jpost_f024.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f024.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f025.ecf b/ecf/scripts/post/jpost_f025.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f025.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f026.ecf b/ecf/scripts/post/jpost_f026.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f026.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f027.ecf b/ecf/scripts/post/jpost_f027.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f027.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f028.ecf b/ecf/scripts/post/jpost_f028.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f028.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f029.ecf b/ecf/scripts/post/jpost_f029.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f029.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f030.ecf b/ecf/scripts/post/jpost_f030.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f030.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f031.ecf b/ecf/scripts/post/jpost_f031.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f031.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f032.ecf b/ecf/scripts/post/jpost_f032.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f032.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f033.ecf b/ecf/scripts/post/jpost_f033.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f033.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f034.ecf b/ecf/scripts/post/jpost_f034.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f034.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f035.ecf b/ecf/scripts/post/jpost_f035.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f035.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f036.ecf b/ecf/scripts/post/jpost_f036.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f036.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f037.ecf b/ecf/scripts/post/jpost_f037.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f037.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f038.ecf b/ecf/scripts/post/jpost_f038.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f038.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f039.ecf b/ecf/scripts/post/jpost_f039.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f039.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f040.ecf b/ecf/scripts/post/jpost_f040.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f040.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f041.ecf b/ecf/scripts/post/jpost_f041.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f041.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f042.ecf b/ecf/scripts/post/jpost_f042.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f042.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f043.ecf b/ecf/scripts/post/jpost_f043.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f043.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f044.ecf b/ecf/scripts/post/jpost_f044.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f044.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f045.ecf b/ecf/scripts/post/jpost_f045.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f045.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f046.ecf b/ecf/scripts/post/jpost_f046.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f046.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f047.ecf b/ecf/scripts/post/jpost_f047.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f047.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f048.ecf b/ecf/scripts/post/jpost_f048.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f048.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f049.ecf b/ecf/scripts/post/jpost_f049.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f049.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f050.ecf b/ecf/scripts/post/jpost_f050.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f050.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f051.ecf b/ecf/scripts/post/jpost_f051.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f051.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f052.ecf b/ecf/scripts/post/jpost_f052.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f052.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f053.ecf b/ecf/scripts/post/jpost_f053.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f053.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f054.ecf b/ecf/scripts/post/jpost_f054.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f054.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f055.ecf b/ecf/scripts/post/jpost_f055.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f055.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f056.ecf b/ecf/scripts/post/jpost_f056.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f056.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f057.ecf b/ecf/scripts/post/jpost_f057.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f057.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f058.ecf b/ecf/scripts/post/jpost_f058.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f058.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f059.ecf b/ecf/scripts/post/jpost_f059.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f059.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f060.ecf b/ecf/scripts/post/jpost_f060.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f060.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f061.ecf b/ecf/scripts/post/jpost_f061.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f061.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f062.ecf b/ecf/scripts/post/jpost_f062.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f062.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f063.ecf b/ecf/scripts/post/jpost_f063.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f063.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f064.ecf b/ecf/scripts/post/jpost_f064.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f064.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f065.ecf b/ecf/scripts/post/jpost_f065.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f065.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f066.ecf b/ecf/scripts/post/jpost_f066.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f066.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f067.ecf b/ecf/scripts/post/jpost_f067.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f067.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f068.ecf b/ecf/scripts/post/jpost_f068.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f068.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f069.ecf b/ecf/scripts/post/jpost_f069.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f069.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f070.ecf b/ecf/scripts/post/jpost_f070.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f070.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f071.ecf b/ecf/scripts/post/jpost_f071.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f071.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/post/jpost_f072.ecf b/ecf/scripts/post/jpost_f072.ecf new file mode 120000 index 0000000000..1e89459463 --- /dev/null +++ b/ecf/scripts/post/jpost_f072.ecf @@ -0,0 +1 @@ +jpost.ecf \ No newline at end of file diff --git a/ecf/scripts/prep/jget_extrn_ics.ecf b/ecf/scripts/prep/jget_extrn_ics.ecf new file mode 100755 index 0000000000..1db677d48d --- /dev/null +++ b/ecf/scripts/prep/jget_extrn_ics.ecf @@ -0,0 +1,36 @@ +#PBS -N aqm_get_extrn_ics_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:45:00 +#PBS -l select=1:mpiprocs=1:ncpus=1:mem=2G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load python/${python_ver} + +module list + + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=ICS +export share_pid="${PDY}${cyc}" + +${HOMEaqm}/jobs/JREGIONAL_GET_EXTRN_MDL_FILES + +%include + +%manual +%end diff --git a/ecf/scripts/prep/jget_extrn_lbcs.ecf b/ecf/scripts/prep/jget_extrn_lbcs.ecf new file mode 100755 index 0000000000..0c8e84d0e6 --- /dev/null +++ b/ecf/scripts/prep/jget_extrn_lbcs.ecf @@ -0,0 +1,35 @@ +#PBS -N aqm_get_extrn_lbcs_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=02:00:00 +#PBS -l select=1:mpiprocs=1:ncpus=1:mem=2G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=LBCS +export share_pid="${PDY}${cyc}" + +${HOMEaqm}/jobs/JREGIONAL_GET_EXTRN_MDL_FILES + +%include + +%manual +%end diff --git a/ecf/scripts/prep/jics.ecf b/ecf/scripts/prep/jics.ecf new file mode 100755 index 0000000000..3b75d27b88 --- /dev/null +++ b/ecf/scripts/prep/jics.ecf @@ -0,0 +1,43 @@ +#PBS -N aqm_ics_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=ICS +SDATE=$($NDATE -6 ${PDY}${cyc}) +PDYS_P1=$(echo $SDATE | cut -c1-8) +cycs_p1=$(echo $SDATE | cut -c9-10) +export PREV_CYCLE_DIR=${COMaqm}/${model}.${PDYS_P1}/${cycs_p1} + +${HOMEaqm}/jobs/JREGIONAL_AQM_ICS + +%include + +%manual +%end diff --git a/ecf/scripts/prep/jlbcs.ecf b/ecf/scripts/prep/jlbcs.ecf new file mode 100755 index 0000000000..7ea0aebb80 --- /dev/null +++ b/ecf/scripts/prep/jlbcs.ecf @@ -0,0 +1,48 @@ +#PBS -N aqm_lbcs_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:20:00 +#PBS -l select=1:mpiprocs=24:ncpus=24 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load cray-pals/${cray_pals_ver} +module load wgrib2/${wgrib2_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=LBCS +export DCOMINchem_lbcs=/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/LBCS/AQM_NA13km_AM4_v1 +export DCOMINgefs=/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GEFS_DATA +export COMINgefs=$(compath.py ${envir}/gefs/${gefs_ver}) + +${HOMEaqm}/jobs/JREGIONAL_AQM_LBCS + +%include + +%manual +%end diff --git a/ecf/scripts/prep/jmake_ics.ecf b/ecf/scripts/prep/jmake_ics.ecf new file mode 100755 index 0000000000..b601d27284 --- /dev/null +++ b/ecf/scripts/prep/jmake_ics.ecf @@ -0,0 +1,46 @@ +#PBS -N aqm_make_ics_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=4:mpiprocs=12:ncpus=12 +#PBS -l place=vscatter:exclhost +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load cray-pals/${cray_pals_ver} +module load esmf/${esmf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=ICS + +${HOMEaqm}/jobs/JREGIONAL_MAKE_ICS + +%include + +%manual +%end diff --git a/ecf/scripts/prep/jmake_lbcs.ecf b/ecf/scripts/prep/jmake_lbcs.ecf new file mode 100755 index 0000000000..522d5ad16a --- /dev/null +++ b/ecf/scripts/prep/jmake_lbcs.ecf @@ -0,0 +1,45 @@ +#PBS -N aqm_make_lbcs_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=128:ncpus=128 +#PBS -l place=vscatter:exclhost +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load cray-pals/${cray_pals_ver} +module load esmf/${esmf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export ICS_OR_LBCS=LBCS + +${HOMEaqm}/jobs/JREGIONAL_MAKE_LBCS + +%include + +%manual +%end diff --git a/ecf/scripts/product/jbias_correction_o3.ecf b/ecf/scripts/product/jbias_correction_o3.ecf new file mode 100755 index 0000000000..ac5c8bd722 --- /dev/null +++ b/ecf/scripts/product/jbias_correction_o3.ecf @@ -0,0 +1,44 @@ +#PBS -N aqm_bias_correction_o3_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ompthreads=32:ncpus=32:mem=120G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load grib_util/${grib_util_ver} +module load wgrib2/${wgrib2_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export DCOMINairnow=/lfs/h1/ops/prod/dcom +export COMOUTbicor=${COMaqm} + +${HOMEaqm}/jobs/JREGIONAL_BIAS_CORRECTION_O3 + +%include + +%manual +%end diff --git a/ecf/scripts/product/jbias_correction_pm25.ecf b/ecf/scripts/product/jbias_correction_pm25.ecf new file mode 100755 index 0000000000..22b2c63a73 --- /dev/null +++ b/ecf/scripts/product/jbias_correction_pm25.ecf @@ -0,0 +1,44 @@ +#PBS -N aqm_bias_correction_pm25_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ompthreads=32:ncpus=32:mem=120G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load libpng/${libpng_ver} +module load grib_util/${grib_util_ver} +module load wgrib2/${wgrib2_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export DCOMINairnow=/lfs/h1/ops/prod/dcom +export COMOUTbicor=${COMaqm} + +${HOMEaqm}/jobs/JREGIONAL_BIAS_CORRECTION_PM25 + +%include + +%manual +%end diff --git a/ecf/scripts/product/jpost_stat_o3.ecf b/ecf/scripts/product/jpost_stat_o3.ecf new file mode 100755 index 0000000000..0ba0fd5329 --- /dev/null +++ b/ecf/scripts/product/jpost_stat_o3.ecf @@ -0,0 +1,41 @@ +#PBS -N aqm_post_stat_o3_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1:mem=120G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load grib_util/${grib_util_ver} +module load wgrib2/${wgrib2_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) + +${HOMEaqm}/jobs/JREGIONAL_POST_STAT_O3 + +%include + +%manual +%end diff --git a/ecf/scripts/product/jpost_stat_pm25.ecf b/ecf/scripts/product/jpost_stat_pm25.ecf new file mode 100755 index 0000000000..e98aa1bd16 --- /dev/null +++ b/ecf/scripts/product/jpost_stat_pm25.ecf @@ -0,0 +1,41 @@ +#PBS -N aqm_post_stat_pm25_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1:mem=120G +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load cray-mpich/${cray_mpich_ver} +module load cray-pals/${cray_pals_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load libjpeg/${libjpeg_ver} +module load zlib/${zlib_ver} +module load grib_util/${grib_util_ver} +module load wgrib2/${wgrib2_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) + +${HOMEaqm}/jobs/JREGIONAL_POST_STAT_PM25 + +%include + +%manual +%end diff --git a/ecf/scripts/product/jpre_post_stat.ecf b/ecf/scripts/product/jpre_post_stat.ecf new file mode 100755 index 0000000000..fd1faa396f --- /dev/null +++ b/ecf/scripts/product/jpre_post_stat.ecf @@ -0,0 +1,38 @@ +#PBS -N aqm_pre_post_stat_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) + +${HOMEaqm}/jobs/JREGIONAL_PRE_POST_STAT + +%include + +%manual +%end diff --git a/ecf/scripts/pts_fire_emis/jfire_emission.ecf b/ecf/scripts/pts_fire_emis/jfire_emission.ecf new file mode 100755 index 0000000000..1f87a636f3 --- /dev/null +++ b/ecf/scripts/pts_fire_emis/jfire_emission.ecf @@ -0,0 +1,38 @@ +#PBS -N aqm_fire_emission_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=00:30:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load hdf5/${hdf5_ver} +module load netcdf/${netcdf_ver} +module load udunits/${udunits_ver} +module load gsl/${gsl_ver} +module load nco/${nco_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) + +${HOMEaqm}/jobs/JREGIONAL_FIRE_EMISSION + +%include + +%manual +%end diff --git a/ecf/scripts/pts_fire_emis/jpoint_source.ecf b/ecf/scripts/pts_fire_emis/jpoint_source.ecf new file mode 100755 index 0000000000..982b6d959e --- /dev/null +++ b/ecf/scripts/pts_fire_emis/jpoint_source.ecf @@ -0,0 +1,34 @@ +#PBS -N aqm_point_source_%CYC% +#PBS -j oe +#PBS -S /bin/bash +#PBS -q %QUEUE% +#PBS -A %PROJ%-%PROJENVIR% +#PBS -l walltime=01:00:00 +#PBS -l select=1:mpiprocs=1:ncpus=1 +#PBS -l debug=true + +model=aqm +export cyc="%CYC%" +%include +%include + +module load PrgEnv-intel/${PrgEnv_intel_ver} +module load craype/${craype_ver} +module load intel/${intel_ver} +module load envvar/${envvar_ver} +module load python/${python_ver} + +module list + +export subcyc=0 +. ${HOMEaqm}/parm/config/var_defns.sh +. $USHdir/source_util_funcs.sh +machine=$(echo_lowercase $MACHINE) +export DCOMINpt_src=/lfs/h2/emc/physics/noscrub/Youhua.Tang/nei2016v1-pt/v2023-01-PT + +${HOMEaqm}/jobs/JREGIONAL_POINT_SOURCE + +%include + +%manual +%end diff --git a/jobs/JAQM_MANAGER b/jobs/JAQM_MANAGER new file mode 100755 index 0000000000..b541079ce0 --- /dev/null +++ b/jobs/JAQM_MANAGER @@ -0,0 +1,38 @@ +#!/bin/bash +set -x + +export RUN_ENVIR=${RUN_ENVIR:-"nco"} +export PS4='$SECONDS + ' +date + +############################################## +# Obtain unique process id (pid) and make temp directory +############################################## +export pid=${pid:-$$} +export outid=${outid:-"LL$job"} + +export DATA=${DATA:-${DATAROOT}/${jobid:?}} +mkdir -p $DATA +cd $DATA +############################################## +# Run setpdy and initialize PDY variables +############################################## +export cycle="t${cyc}z" +setpdy.sh +. ./PDY + +############################################## +# Set variables used in the script +############################################## +${HOMEaqm}/scripts/exaqm_manager.sh +status=$? +[[ $status -ne 0 ]] && exit $status + +########################################## +# Remove the Temporary working directory +########################################## +cd $DATAROOT +[[ $KEEPDATA = "NO" ]] && rm -rf $DATA + +date +exit 0 diff --git a/jobs/JDATA_CLEANUP b/jobs/JDATA_CLEANUP new file mode 100755 index 0000000000..5cda6bb171 --- /dev/null +++ b/jobs/JDATA_CLEANUP @@ -0,0 +1,39 @@ +#!/bin/bash +set -x + +export RUN_ENVIR=${RUN_ENVIR:-"nco"} +export PS4='$SECONDS + ' +date + +############################################## +# Obtain unique process id (pid) and make temp directory +############################################## +export pid=${pid:-$$} +export outid=${outid:-"LL$job"} + +export DATA=${DATA:-${DATAROOT}/${jobid:?}} +mkdir -p $DATA +cd $DATA + +############################################## +# Run setpdy and initialize PDY variables +############################################## +export cycle="t${cyc}z" +setpdy.sh +. ./PDY + +############################################## +# Set variables used in the script +############################################## +${HOMEaqm}/scripts/exdata_cleanup.sh +status=$? +[[ $status -ne 0 ]] && exit $status + +########################################## +# Remove the Temporary working directory +########################################## +cd $DATAROOT +[[ $KEEPDATA = "NO" ]] && rm -rf $DATA + +date +exit 0 diff --git a/jobs/JREGIONAL_AQM_ICS b/jobs/JREGIONAL_AQM_ICS index c1265de373..b6ed8b2023 100755 --- a/jobs/JREGIONAL_AQM_ICS +++ b/jobs/JREGIONAL_AQM_ICS @@ -65,7 +65,7 @@ which the model needs. #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_AQM_LBCS b/jobs/JREGIONAL_AQM_LBCS index 6c8945f13c..de970e0216 100755 --- a/jobs/JREGIONAL_AQM_LBCS +++ b/jobs/JREGIONAL_AQM_LBCS @@ -65,7 +65,7 @@ which the model needs. #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_BIAS_CORRECTION_O3 b/jobs/JREGIONAL_BIAS_CORRECTION_O3 index ca33e5922c..720dfed928 100755 --- a/jobs/JREGIONAL_BIAS_CORRECTION_O3 +++ b/jobs/JREGIONAL_BIAS_CORRECTION_O3 @@ -19,6 +19,10 @@ source_config_for_task "cpl_aqm_parm|task_run_post|task_bias_correction_o3" ${GLOBAL_VAR_DEFNS_FP} . $USHdir/job_preamble.sh # +export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/prod/dcom} +export DCOMINairnow=${DCOMINairnow:-/lfs/h1/ops/prod/dcom} +export COMINbicor=${COMINbicor:-$(compath.py ${NET}/${aqm_ver})} +export COMOUTbicor=${COMOUTbicor:-$(compath.py ${NET}/${aqm_ver})} #----------------------------------------------------------------------- # # Save current shell options (in a global array). Then set new options @@ -67,6 +71,7 @@ if [ "${RUN_ENVIR}" = "community" ]; then cd $DATA fi +COMOUTwmo="${COMOUTwmo:-${COMOUT}/wmo}" mkdir -p ${COMOUTwmo} export PARMaqm_utils="${PARMaqm_utils:-${HOMEaqm}/sorc/AQM-utils/parm}" diff --git a/jobs/JREGIONAL_BIAS_CORRECTION_PM25 b/jobs/JREGIONAL_BIAS_CORRECTION_PM25 index dce8a3617f..e440bb97ef 100755 --- a/jobs/JREGIONAL_BIAS_CORRECTION_PM25 +++ b/jobs/JREGIONAL_BIAS_CORRECTION_PM25 @@ -19,6 +19,10 @@ source_config_for_task "cpl_aqm_parm|task_run_post|task_bias_correction_pm25" ${GLOBAL_VAR_DEFNS_FP} . $USHdir/job_preamble.sh # +export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/prod/dcom} +export DCOMINairnow=${DCOMINairnow:-/lfs/h1/ops/prod/dcom} +export COMINbicor=${COMINbicor:-$(compath.py ${NET}/${aqm_ver})} +export COMOUTbicor=${COMOUTbicor:-$(compath.py ${NET}/${aqm_ver})} #----------------------------------------------------------------------- # # Save current shell options (in a global array). Then set new options @@ -67,6 +71,7 @@ if [ "${RUN_ENVIR}" = "community" ]; then cd $DATA fi +COMOUTwmo="${COMOUTwmo:-${COMOUT}/wmo}" mkdir -p ${COMOUTwmo} export PARMaqm_utils="${PARMaqm_utils:-${HOMEaqm}/sorc/AQM-utils/parm}" diff --git a/jobs/JREGIONAL_FIRE_EMISSION b/jobs/JREGIONAL_FIRE_EMISSION index f4e296a684..205d446dd5 100755 --- a/jobs/JREGIONAL_FIRE_EMISSION +++ b/jobs/JREGIONAL_FIRE_EMISSION @@ -19,6 +19,8 @@ source_config_for_task "cpl_aqm_parm|task_fire_emission" ${GLOBAL_VAR_DEFNS_FP} . $USHdir/job_preamble.sh # +export DCOMINfire=${DCOMINfire:-$(compath.py ${DCOMROOT}/${PDY}/rave)} + #----------------------------------------------------------------------- # # Save current shell options (in a global array). Then set new options @@ -103,7 +105,7 @@ fi # #----------------------------------------------------------------------- # -export FIRE_EMISSION_STAGING_DIR="${FIRE_EMISSION_STAGING_DIR:-${COMIN}/FIRE_EMISSION}" +export FIRE_EMISSION_STAGING_DIR="${COMIN}/FIRE_EMISSION" mkdir -p ${FIRE_EMISSION_STAGING_DIR} # #----------------------------------------------------------------------- diff --git a/jobs/JREGIONAL_GET_EXTRN_MDL_FILES b/jobs/JREGIONAL_GET_EXTRN_MDL_FILES index 7e5b3e7f25..7e040a2ada 100755 --- a/jobs/JREGIONAL_GET_EXTRN_MDL_FILES +++ b/jobs/JREGIONAL_GET_EXTRN_MDL_FILES @@ -79,7 +79,10 @@ to generate initial or lateral boundary conditions for the FV3 model. #----------------------------------------------------------------------- # valid_vals_ICS_OR_LBCS=( "ICS" "LBCS" ) -check_var_valid_value "ICS_OR_LBCS" "valid_vals_ICS_OR_LBCS" +ICS_OR_LBCS=${ICS_OR_LBCS:-""} +if [ ! "${ICS_OR_LBCS}" = "" ]; then + check_var_valid_value "ICS_OR_LBCS" "valid_vals_ICS_OR_LBCS" +fi # #----------------------------------------------------------------------- # @@ -219,7 +222,12 @@ esac #----------------------------------------------------------------------- # if [ "${RUN_ENVIR}" = "nco" ]; then - export EXTRN_MDL_STAGING_DIR="${EXTRN_MDL_STAGING_DIR:-${DATA}}" + if [ "${ICS_OR_LBCS}" = "ICS" ]; then + t_text=aqm_get_extrn_ics + else + t_text=aqm_get_extrn_lbcs + fi + export EXTRN_MDL_STAGING_DIR="${DATAROOT}/${t_text}_${cyc}.${share_pid}" else export EXTRN_MDL_STAGING_DIR="${COMIN}/${EXTRN_MDL_NAME}/for_${ICS_OR_LBCS}" mkdir -p ${EXTRN_MDL_STAGING_DIR} @@ -242,7 +250,7 @@ Call to ex-script corresponding to J-job \"${scrfunc_fn}\" failed." # #----------------------------------------------------------------------- # -job_postamble "FALSE" +# job_postamble # #----------------------------------------------------------------------- # diff --git a/jobs/JREGIONAL_MAKE_ICS b/jobs/JREGIONAL_MAKE_ICS index d8daef636e..42d85990ff 100755 --- a/jobs/JREGIONAL_MAKE_ICS +++ b/jobs/JREGIONAL_MAKE_ICS @@ -56,7 +56,7 @@ for the FV3 (in NetCDF format). #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_MAKE_LBCS b/jobs/JREGIONAL_MAKE_LBCS index 15fbdd8a6b..29bebb70f6 100755 --- a/jobs/JREGIONAL_MAKE_LBCS +++ b/jobs/JREGIONAL_MAKE_LBCS @@ -56,7 +56,7 @@ hour zero). #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_NEXUS_EMISSION b/jobs/JREGIONAL_NEXUS_EMISSION index f305c3669c..bfe1b6a8fa 100755 --- a/jobs/JREGIONAL_NEXUS_EMISSION +++ b/jobs/JREGIONAL_NEXUS_EMISSION @@ -63,7 +63,7 @@ using NEXUS which will output for FV3 (in NetCDF format). #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}/NEXUS}" + export INPUT_DATA="${COMIN}/NEXUS" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/NEXUS" fi diff --git a/jobs/JREGIONAL_NEXUS_GFS_SFC b/jobs/JREGIONAL_NEXUS_GFS_SFC index 2a64a2f15a..345f5c907b 100755 --- a/jobs/JREGIONAL_NEXUS_GFS_SFC +++ b/jobs/JREGIONAL_NEXUS_GFS_SFC @@ -18,6 +18,9 @@ . $USHdir/source_util_funcs.sh source_config_for_task "cpl_aqm_parm|task_nexus_gfs_sfc" ${GLOBAL_VAR_DEFNS_FP} . $USHdir/job_preamble.sh "TRUE" + +# export COMINgfs=${COMINgfs:-$(compath.py gfs/${gfs_ver})} + # #----------------------------------------------------------------------- # @@ -94,7 +97,10 @@ fi # #----------------------------------------------------------------------- # -DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}/tmp_NEXUS_GFS_SFC}" +# DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}/tmp_NEXUS_GFS_SFC}" +DATA=${DATAROOT}/aqm_nexus_gfs_sfc_${cyc}.${share_pid} +mkdir -p ${DATA} +cd ${DATA} # #----------------------------------------------------------------------- # @@ -103,7 +109,8 @@ DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}/tmp_NEXUS_GFS_SFC}" #----------------------------------------------------------------------- # if [ "${RUN_ENVIR}" = "nco" ]; then - export GFS_SFC_STAGING_DIR="${GFS_SFC_STAGING_DIR:-${DATA}}" + # export GFS_SFC_STAGING_DIR="${DATA}" + export GFS_SFC_STAGING_DIR=${GFS_SFC_STAGING_DIR:-${DATAROOT}/aqm_nexus_gfs_sfc_${cyc}.${share_pid}} else export GFS_SFC_STAGING_DIR="${COMIN}/GFS_SFC" mkdir -p ${GFS_SFC_STAGING_DIR} @@ -126,7 +133,7 @@ Call to ex-script corresponding to J-job \"${scrfunc_fn}\" failed." # #----------------------------------------------------------------------- # -job_postamble "FALSE" +# job_postamble # #----------------------------------------------------------------------- # diff --git a/jobs/JREGIONAL_NEXUS_POST_SPLIT b/jobs/JREGIONAL_NEXUS_POST_SPLIT index e1f1df29de..c8557cf93b 100755 --- a/jobs/JREGIONAL_NEXUS_POST_SPLIT +++ b/jobs/JREGIONAL_NEXUS_POST_SPLIT @@ -55,7 +55,7 @@ using NEXUS which will output for FV3 (in NetCDF format). #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_POINT_SOURCE b/jobs/JREGIONAL_POINT_SOURCE index cbf8e742fb..5f43b9567a 100755 --- a/jobs/JREGIONAL_POINT_SOURCE +++ b/jobs/JREGIONAL_POINT_SOURCE @@ -54,7 +54,7 @@ This is the J-job script for the task that generates the point source files. #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi diff --git a/jobs/JREGIONAL_POST_STAT_O3 b/jobs/JREGIONAL_POST_STAT_O3 index 61415a5b4a..cbe34929b9 100755 --- a/jobs/JREGIONAL_POST_STAT_O3 +++ b/jobs/JREGIONAL_POST_STAT_O3 @@ -67,6 +67,7 @@ if [ "${RUN_ENVIR}" = "community" ]; then cd $DATA fi +COMOUTwmo="${COMOUTwmo:-${COMOUT}/wmo}" mkdir -p ${COMOUTwmo} export PARMaqm_utils="${PARMaqm_utils:-${HOMEaqm}/sorc/AQM-utils/parm}" diff --git a/jobs/JREGIONAL_POST_STAT_PM25 b/jobs/JREGIONAL_POST_STAT_PM25 index c6981928c8..7c18a2f712 100755 --- a/jobs/JREGIONAL_POST_STAT_PM25 +++ b/jobs/JREGIONAL_POST_STAT_PM25 @@ -67,6 +67,7 @@ if [ "${RUN_ENVIR}" = "community" ]; then cd $DATA fi +COMOUTwmo="${COMOUTwmo:-${COMOUT}/wmo}" mkdir -p ${COMOUTwmo} export PARMaqm_utils="${PARMaqm_utils:-${HOMEaqm}/sorc/AQM-utils/parm}" diff --git a/jobs/JREGIONAL_RUN_FCST b/jobs/JREGIONAL_RUN_FCST index 3a566816fa..a2906654a6 100755 --- a/jobs/JREGIONAL_RUN_FCST +++ b/jobs/JREGIONAL_RUN_FCST @@ -63,12 +63,13 @@ the specified cycle. # #----------------------------------------------------------------------- # -DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}}" +# DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}}" +DATA="${DATAROOT}/aqm_forecast_${cyc}.${share_pid}" mkdir -p ${DATA}/INPUT mkdir -p ${DATA}/RESTART if [ $RUN_ENVIR = "nco" ]; then - export INPUT_DATA="${INPUT_DATA:-${COMIN}}" + export INPUT_DATA="${COMIN}" else export INPUT_DATA="${COMIN}${SLASH_ENSMEM_SUBDIR}/INPUT" fi @@ -91,7 +92,7 @@ Call to ex-script corresponding to J-job \"${scrfunc_fn}\" failed." # #----------------------------------------------------------------------- # -job_postamble "FALSE" +# job_postamble # #----------------------------------------------------------------------- # diff --git a/jobs/JREGIONAL_RUN_POST b/jobs/JREGIONAL_RUN_POST index 308e254b7e..48615036ef 100755 --- a/jobs/JREGIONAL_RUN_POST +++ b/jobs/JREGIONAL_RUN_POST @@ -62,7 +62,8 @@ on the output files corresponding to a specified forecast hour. # #----------------------------------------------------------------------- # -DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}}" +export DATA="${DATA:-${COMIN}${SLASH_ENSMEM_SUBDIR}}" +export DATAFCST=$DATAROOT/aqm_forecast_${cyc}.${PDY}${cyc} # # If SUB_HOURLY_POST is not set to "TRUE", ensure that the forecast # minutes (fmn) are set to "00". This is necessary in order to pass @@ -131,35 +132,11 @@ Call to ex-script corresponding to J-job \"${scrfunc_fn}\" failed." # #----------------------------------------------------------------------- # -# Create a flag file to make rocoto aware that the run_post task has -# successfully completed. This flag is necessary for varying forecast -# hours (FCST_LEN_HRS: -1) -# -#----------------------------------------------------------------------- -# -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} - - fcst_len_hrs=$( printf "%03d" "${FCST_LEN_HRS}" ) - if [ "${fhr}" = "${fcst_len_hrs}" ]; then - touch "${COMIN}/post_${PDY}${cyc}_task_complete.txt" - fi -fi -# -#----------------------------------------------------------------------- -# # Run job postamble. # #----------------------------------------------------------------------- # -fcst_len_hrs=$( printf "%03d" "${FCST_LEN_HRS}" ) -if [ "${fhr}" = "${fcst_len_hrs}" ]; then - job_postamble "TRUE" -else - job_postamble -fi +job_postamble # #----------------------------------------------------------------------- # diff --git a/parm/config/data_table b/parm/config/data_table new file mode 100644 index 0000000000..e69de29bb2 diff --git a/parm/config/field_table b/parm/config/field_table new file mode 100644 index 0000000000..b8b0bee266 --- /dev/null +++ b/parm/config/field_table @@ -0,0 +1,979 @@ +# added by FRE: sphum must be present in atmos +# specific humidity for moist runs + "TRACER", "atmos_mod", "sphum" + "longname", "specific humidity" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / +# prognostic cloud water mixing ratio + "TRACER", "atmos_mod", "liq_wat" + "longname", "cloud water mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / + "TRACER", "atmos_mod", "rainwat" + "longname", "rain mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / + "TRACER", "atmos_mod", "ice_wat" + "longname", "cloud ice mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / + "TRACER", "atmos_mod", "snowwat" + "longname", "snow mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / + "TRACER", "atmos_mod", "graupel" + "longname", "graupel mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / +# prognostic ozone mixing ratio tracer + "TRACER", "atmos_mod", "o3mr" + "longname", "ozone mixing ratio" + "units", "kg/kg" + "profile_type", "fixed", "surface_value=1.e30" / +# prognostic subgrid scale turbulent kinetic energy + "TRACER", "atmos_mod", "sgs_tke" + "longname", "subgrid scale turbulent kinetic energy" + "units", "m2/s2" + "profile_type", "fixed", "surface_value=0.0" / +# prognostic air quality tracers + "TRACER", "atmos_mod", "NO2" + "longname", "NO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NO" + "longname", "NO" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "O3" + "longname", "O3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NO3" + "longname", "NO3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "H2O2" + "longname", "H2O2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "N2O5" + "longname", "N2O5" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HNO3" + "longname", "HNO3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HONO" + "longname", "HONO" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PNA" + "longname", "PNA" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SO2" + "longname", "SO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SULF" + "longname", "SULF" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PAN" + "longname", "PAN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PACD" + "longname", "PACD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AACD" + "longname", "AACD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALD2" + "longname", "ALD2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PANX" + "longname", "PANX" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "FORM" + "longname", "FORM" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "MEPX" + "longname", "MEPX" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "MEOH" + "longname", "MEOH" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ROOH" + "longname", "ROOH" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NTR1" + "longname", "NTR1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NTR2" + "longname", "NTR2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "FACD" + "longname", "FACD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CO" + "longname", "CO" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALDX" + "longname", "ALDX" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "GLYD" + "longname", "GLYD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "GLY" + "longname", "GLY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "MGLY" + "longname", "MGLY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ETHA" + "longname", "ETHA" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ETOH" + "longname", "ETOH" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "KET" + "longname", "KET" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PAR" + "longname", "PAR" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACET" + "longname", "ACET" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PRPA" + "longname", "PRPA" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ETHY" + "longname", "ETHY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ETH" + "longname", "ETH" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "OLE" + "longname", "OLE" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "IOLE" + "longname", "IOLE" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ISOP" + "longname", "ISOP" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ISPD" + "longname", "ISPD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "INTR" + "longname", "INTR" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ISPX" + "longname", "ISPX" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HPLD" + "longname", "HPLD" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "OPO3" + "longname", "OPO3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "EPOX" + "longname", "EPOX" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "TERP" + "longname", "TERP" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "BENZENE" + "longname", "BENZENE" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CRES" + "longname", "CRES" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "OPEN" + "longname", "OPEN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "TOL" + "longname", "TOL" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "XOPN" + "longname", "XOPN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "XYLMN" + "longname", "XYLMN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NAPH" + "longname", "NAPH" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CAT1" + "longname", "CAT1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CRON" + "longname", "CRON" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "OPAN" + "longname", "OPAN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ECH4" + "longname", "ECH4" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CL2" + "longname", "CL2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HOCL" + "longname", "HOCL" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "FMCL" + "longname", "FMCL" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HCL" + "longname", "HCL" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "CLNO2" + "longname", "CLNO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SESQ" + "longname", "SESQ" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SOAALK" + "longname", "SOAALK" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VLVPO1" + "longname", "VLVPO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVPO1" + "longname", "VSVPO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVPO2" + "longname", "VSVPO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVPO3" + "longname", "VSVPO3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VIVPO1" + "longname", "VIVPO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VLVOO1" + "longname", "VLVOO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VLVOO2" + "longname", "VLVOO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVOO1" + "longname", "VSVOO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVOO2" + "longname", "VSVOO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "VSVOO3" + "longname", "VSVOO3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "PCVOC" + "longname", "PCVOC" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "FORM_PRIMARY" + "longname", "FORM_PRIMARY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALD2_PRIMARY" + "longname", "ALD2_PRIMARY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "BUTADIENE13" + "longname", "BUTADIENE13" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACROLEIN" + "longname", "ACROLEIN" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACRO_PRIMARY" + "longname", "ACRO_PRIMARY" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "TOLU" + "longname", "TOLU" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HG" + "longname", "HG" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "HGIIGAS" + "longname", "HGIIGAS" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASO4J" + "longname", "ASO4J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASO4I" + "longname", "ASO4I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANH4J" + "longname", "ANH4J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANH4I" + "longname", "ANH4I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANO3J" + "longname", "ANO3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANO3I" + "longname", "ANO3I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AALK1J" + "longname", "AALK1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AALK2J" + "longname", "AALK2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AXYL1J" + "longname", "AXYL1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AXYL2J" + "longname", "AXYL2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AXYL3J" + "longname", "AXYL3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATOL1J" + "longname", "ATOL1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATOL2J" + "longname", "ATOL2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATOL3J" + "longname", "ATOL3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ABNZ1J" + "longname", "ABNZ1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ABNZ2J" + "longname", "ABNZ2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ABNZ3J" + "longname", "ABNZ3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "APAH1J" + "longname", "APAH1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "APAH2J" + "longname", "APAH2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "APAH3J" + "longname", "APAH3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATRP1J" + "longname", "ATRP1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATRP2J" + "longname", "ATRP2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AISO1J" + "longname", "AISO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AISO2J" + "longname", "AISO2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASQTJ" + "longname", "ASQTJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AORGCJ" + "longname", "AORGCJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AECJ" + "longname", "AECJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AECI" + "longname", "AECI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AOTHRJ" + "longname", "AOTHRJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AOTHRI" + "longname", "AOTHRI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AFEJ" + "longname", "AFEJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AALJ" + "longname", "AALJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASIJ" + "longname", "ASIJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ATIJ" + "longname", "ATIJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACAJ" + "longname", "ACAJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AMGJ" + "longname", "AMGJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AKJ" + "longname", "AKJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AMNJ" + "longname", "AMNJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACORS" + "longname", "ACORS" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASOIL" + "longname", "ASOIL" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NUMATKN" + "longname", "NUMATKN" + "units", "num/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NUMACC" + "longname", "NUMACC" + "units", "num/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NUMCOR" + "longname", "NUMCOR" + "units", "num/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SRFATKN" + "longname", "SRFATKN" + "units", "m2/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SRFACC" + "longname", "SRFACC" + "units", "m2/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SRFCOR" + "longname", "SRFCOR" + "units", "m2/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH2OJ" + "longname", "AH2OJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH2OI" + "longname", "AH2OI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH3OPJ" + "longname", "AH3OPJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH3OPI" + "longname", "AH3OPI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANAJ" + "longname", "ANAJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANAI" + "longname", "ANAI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACLJ" + "longname", "ACLJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACLI" + "longname", "ACLI" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASEACAT" + "longname", "ASEACAT" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ACLK" + "longname", "ACLK" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASO4K" + "longname", "ASO4K" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANH4K" + "longname", "ANH4K" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ANO3K" + "longname", "ANO3K" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH2OK" + "longname", "AH2OK" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AH3OPK" + "longname", "AH3OPK" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AISO3J" + "longname", "AISO3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AOLGAJ" + "longname", "AOLGAJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AOLGBJ" + "longname", "AOLGBJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AGLYJ" + "longname", "AGLYJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "APCSOJ" + "longname", "APCSOJ" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVPO1I" + "longname", "ALVPO1I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVPO1I" + "longname", "ASVPO1I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVPO2I" + "longname", "ASVPO2I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVPO1J" + "longname", "ALVPO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVPO1J" + "longname", "ASVPO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVPO2J" + "longname", "ASVPO2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVPO3J" + "longname", "ASVPO3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "AIVPO1J" + "longname", "AIVPO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVOO1I" + "longname", "ALVOO1I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVOO2I" + "longname", "ALVOO2I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVOO1I" + "longname", "ASVOO1I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVOO2I" + "longname", "ASVOO2I" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVOO1J" + "longname", "ALVOO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ALVOO2J" + "longname", "ALVOO2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVOO1J" + "longname", "ASVOO1J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVOO2J" + "longname", "ASVOO2J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "ASVOO3J" + "longname", "ASVOO3J" + "units", "ug/kg" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "NH3" + "longname", "NH3" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_ALK1" + "longname", "SV_ALK1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_ALK2" + "longname", "SV_ALK2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_XYL1" + "longname", "SV_XYL1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_XYL2" + "longname", "SV_XYL2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_TOL1" + "longname", "SV_TOL1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_TOL2" + "longname", "SV_TOL2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_BNZ1" + "longname", "SV_BNZ1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_BNZ2" + "longname", "SV_BNZ2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_PAH1" + "longname", "SV_PAH1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_PAH2" + "longname", "SV_PAH2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_TRP1" + "longname", "SV_TRP1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_TRP2" + "longname", "SV_TRP2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_ISO1" + "longname", "SV_ISO1" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_ISO2" + "longname", "SV_ISO2" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "SV_SQT" + "longname", "SV_SQT" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / + "TRACER", "atmos_mod", "LV_PCSOG" + "longname", "LV_PCSOG" + "units", "ppmV" + "tracer_usage", "chemistry" + "profile_type", "fixed", "surface_value=1.e-7" / +# diagnostic air quality tracers + "TRACER", "atmos_mod", "PM25AT" + "longname", "PM2.5 fraction of Aitken mode" + "units", "1" + "tracer_usage", "chemistry", "type=diagnostic" + "profile_type", "fixed", "surface_value=0.0" / + "TRACER", "atmos_mod", "PM25AC" + "longname", "PM2.5 fraction of accumulation mode" + "units", "1" + "tracer_usage", "chemistry", "type=diagnostic" + "profile_type", "fixed", "surface_value=0.0" / + "TRACER", "atmos_mod", "PM25CO" + "longname", "PM2.5 fraction of coarse mode" + "units", "1" + "tracer_usage", "chemistry", "type=diagnostic" + "profile_type", "fixed", "surface_value=0.0" / +"TRACER", "atmos_mod", "PM25_TOT" + "longname", "PM 2.5 from AQM model" + "units", "ug/m3" + "tracer_usage", "chemistry", "type=diagnostic" + "profile_type", "fixed", "surface_value=0.0" / +# non-prognostic cloud amount + "TRACER", "atmos_mod", "cld_amt" + "longname", "cloud amount" + "units", "1" + "profile_type", "fixed", "surface_value=1.e30" / diff --git a/parm/config/input.nml b/parm/config/input.nml new file mode 100644 index 0000000000..1a4c439b5e --- /dev/null +++ b/parm/config/input.nml @@ -0,0 +1,357 @@ +&amip_interp_nml + data_set = 'reynolds_oi' + date_out_of_range = 'climo' + interp_oi_sst = .true. + no_anom_sst = .false. + use_ncep_ice = .false. + use_ncep_sst = .true. +/ + +&atmos_model_nml + blocksize = 16 + ccpp_suite = 'FV3_GFS_v16' + chksum_debug = .false. + dycore_only = .false. +/ + +&cires_ugwp_nml + knob_ugwp_azdir = 2, 4, 4, 4 + knob_ugwp_doaxyz = 1 + knob_ugwp_doheat = 1 + knob_ugwp_dokdis = 1 + knob_ugwp_effac = 1, 1, 1, 1 + knob_ugwp_ndx4lh = 1 + knob_ugwp_solver = 2 + knob_ugwp_source = 1, 1, 0, 0 + knob_ugwp_stoch = 0, 0, 0, 0 + knob_ugwp_version = 0 + knob_ugwp_wvspec = 1, 25, 25, 25 + launch_level = 27 +/ + +&diag_manager_nml + max_output_fields = 450 + prepend_date = .false. +/ + +&external_ic_nml + checker_tr = .false. + filtered_terrain = .true. + gfs_dwinds = .true. + levp = 65 + nt_checker = 0 +/ + +&fms_io_nml + checksum_required = .false. + max_files_r = 100 + max_files_w = 100 +/ + +&fms_nml + clock_grain = 'ROUTINE' + domains_stack_size = 12000000 + print_memory_usage = .false. +/ + +&fv_core_nml + a_imp = 1.0 + adjust_dry_mass = .false. + agrid_vel_rst = .false. + bc_update_interval = 6 + beta = 0.0 + consv_am = .false. + consv_te = 0.0 + d2_bg = 0.0 + d2_bg_k1 = 0.2 + d2_bg_k2 = 0.0 + d4_bg = 0.12 + d_con = 1.0 + d_ext = 0.0 + dddmp = 0.1 + delt_max = 0.002 + dnats = 5 + do_sat_adj = .true. + do_schmidt = .true. + do_vort_damp = .true. + dwind_2d = .false. + dz_min = 6 + external_eta = .true. + external_ic = .true. + fill = .true. + full_zs_filter = .false. + fv_debug = .false. + fv_sg_adj = 450 + gfs_phil = .false. + hord_dp = -5 + hord_mt = 5 + hord_tm = 5 + hord_tr = 8 + hord_vt = 5 + hydrostatic = .false. + io_layout = 1, 1 + k_split = 1 + ke_bg = 0.0 + kord_mt = 9 + kord_tm = -9 + kord_tr = 9 + kord_wz = 9 + layout = 50, 34 + make_nh = .false. + mountain = .false. + n_split = 8 + n_sponge = 10 + n_zs_filter = 0 + na_init = 0 + ncep_ic = .false. + nggps_ic = .true. + no_dycore = .false. + nord = 2 + npx = 801 + npy = 545 + npz = 64 + nrows_blend = 0 + ntiles = 1 + nudge_dz = .false. + nudge_qv = .true. + nwat = 6 + p_fac = 0.1 + phys_hydrostatic = .false. + print_freq = 6 + psm_bc = 1 + range_warn = .false. + read_increment = .false. + regional = .true. + regional_bcs_from_gsi = .false. + res_latlon_dynamics = '' + reset_eta = .false. + rf_cutoff = 750.0 + stretch_fac = 0.999 + target_lat = 50.0 + target_lon = -118.0 + tau = 10.0 + use_hydro_pressure = .false. + vtdm4 = 0.02 + warm_start = .false. + write_restart_with_bcs = .false. + z_tracer = .true. +/ + +&fv_grid_nml + grid_file = 'INPUT/grid_spec.nc' +/ + +&gfdl_cloud_microphysics_nml + c_cracw = 0.8 + c_paut = 0.5 + c_pgacs = 0.01 + c_psaci = 0.05 + ccn_l = 300.0 + ccn_o = 100.0 + const_vg = .false. + const_vi = .false. + const_vr = .false. + const_vs = .false. + de_ice = .false. + do_qa = .true. + do_sedi_heat = .false. + dw_land = 0.16 + dw_ocean = 0.1 + fast_sat_adj = .true. + fix_negative = .true. + icloud_f = 1 + mono_prof = .true. + mp_time = 150.0 + prog_ccn = .false. + qi0_crt = 8e-05 + qi_lim = 1.0 + ql_gen = 0.001 + ql_mlt = 0.001 + qs0_crt = 0.001 + rad_graupel = .true. + rad_rain = .true. + rad_snow = .true. + reiflag = 2 + rh_inc = 0.3 + rh_inr = 0.3 + rh_ins = 0.3 + rthresh = 1e-05 + sedi_transport = .true. + tau_g2v = 900.0 + tau_i2s = 1000.0 + tau_l2v = 225.0 + tau_v2l = 150.0 + use_ccn = .true. + use_ppm = .false. + vg_max = 12.0 + vi_max = 1.0 + vr_max = 12.0 + vs_max = 2.0 + z_slope_ice = .true. + z_slope_liq = .true. +/ + +&gfs_physics_nml + cal_pre = .false. + cdmbgwd = 4.0, 0.15, 1.0, 1.0 + cnvcld = .true. + cnvgwd = .true. + cplaqm = .true. + cplocn2atm = .false. + debug = .false. + do_shum = .false. + do_skeb = .false. + do_spp = .false. + do_sppt = .false. + do_tofd = .true. + do_ugwp = .false. + dspheat = .true. + effr_in = .true. + fhcyc = 0 + fhlwr = 3600.0 + fhswr = 3600.0 + fhzero = 1.0 + fscav_aero = 'aacd:0.0', 'acet:0.0', 'acrolein:0.0', 'acro_primary:0.0', + 'ald2:0.0', 'ald2_primary:0.0', 'aldx:0.0', 'benzene:0.0', + 'butadiene13:0.0', 'cat1:0.0', 'cl2:0.0', 'clno2:0.0', + 'co:0.0', 'cres:0.0', 'cron:0.0', 'ech4:0.0', 'epox:0.0', + 'eth:0.0', 'etha:0.0', 'ethy:0.0', 'etoh:0.0', 'facd:0.0', + 'fmcl:0.0', 'form:0.0', 'form_primary:0.0', 'gly:0.0', + 'glyd:0.0', 'h2o2:0.0', 'hcl:0.0', 'hg:0.0', 'hgiigas:0.0', + 'hno3:0.0', 'hocl:0.0', 'hono:0.0', 'hpld:0.0', 'intr:0.0', + 'iole:0.0', 'isop:0.0', 'ispd:0.0', 'ispx:0.0', 'ket:0.0', + 'meoh:0.0', 'mepx:0.0', 'mgly:0.0', 'n2o5:0.0', 'naph:0.0', + 'no:0.0', 'no2:0.0', 'no3:0.0', 'ntr1:0.0', 'ntr2:0.0', + 'o3:0.0', 'ole:0.0', 'opan:0.0', 'open:0.0', 'opo3:0.0', + 'pacd:0.0', 'pan:0.0', 'panx:0.0', 'par:0.0', 'pcvoc:0.0', + 'pna:0.0', 'prpa:0.0', 'rooh:0.0', 'sesq:0.0', 'so2:0.0', + 'soaalk:0.0', 'sulf:0.0', 'terp:0.0', 'tol:0.0', 'tolu:0.0', + 'vivpo1:0.0', 'vlvoo1:0.0', 'vlvoo2:0.0', 'vlvpo1:0.0', + 'vsvoo1:0.0', 'vsvoo2:0.0', 'vsvoo3:0.0', 'vsvpo1:0.0', + 'vsvpo2:0.0', 'vsvpo3:0.0', 'xopn:0.0', 'xylmn:0.0', '*:0.2' + h2o_phys = .true. + hybedmf = .false. + iaer = 5111 + ialb = 1 + iau_inc_files = '' + icliq_sw = 2 + ico2 = 2 + iems = 1 + imfdeepcnv = 2 + imfshalcnv = 2 + imp_physics = 11 + iopt_alb = 2 + iopt_btr = 1 + iopt_crs = 1 + iopt_dveg = 1 + iopt_frz = 1 + iopt_inf = 1 + iopt_rad = 1 + iopt_run = 1 + iopt_sfc = 1 + iopt_snf = 4 + iopt_stc = 1 + iopt_tbot = 2 + iopt_trs = 2 + iovr = 3 + isatmedmf = 1 + isol = 2 + isot = 1 + isubc_lw = 2 + isubc_sw = 2 + ivegsrc = 1 + ldiag3d = .false. + ldiag_ugwp = .false. + lgfdlmprad = .true. + lheatstrg = .true. + lndp_type = 0 + lsm = 1 + lsoil = 4 + lwhtr = .true. + n_var_lndp = 0 + n_var_spp = 0 + nsradar_reset = 3600 + nst_anl = .true. + nstf_name = 2, 1, 0, 0, 0 + oz_phys = .false. + oz_phys_2015 = .true. + pdfcld = .false. + prautco = 0.00015, 0.00015 + pre_rad = .false. + print_diff_pgr = .false. + prslrd0 = 0.0 + psautco = 0.0008, 0.0005 + random_clds = .false. + redrag = .true. + satmedmf = .true. + sfclay_compute_flux = .false. + shal_cnv = .true. + swhtr = .true. + trans_trac = .true. + use_ufo = .true. +/ + +&interpolator_nml + interp_method = 'conserve_great_circle' +/ + +&mpp_io_nml + deflate_level = 1 + shuffle = 1 +/ + +&nam_sfcperts +/ + +&nam_sppperts +/ + +&nam_stochy +/ + +&namsfc + fabsl = 99999 + faisl = 99999 + faiss = 99999 + fnacna = '' + fnaisc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/CFSR.SEAICE.1982.2012.monthly.clim.grb' + fnglac = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/global_glacier.2x2.grb' + fnmskh = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/seaice_newland.grb' + fnmxic = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/global_maxice.2x2.grb' + fnsmcc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/global_soilmgldas.t126.384.190.grb' + fnsnoa = '' + fnsnoc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/global_snoclim.1.875.grb' + fntsfa = '' + fntsfc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_am/RTGSST.1982.2012.monthly.clim.grb' + fnzorc = 'igbp' + fsicl = 99999 + fsics = 99999 + fslpl = 99999 + fsmcl = 99999, 99999, 99999 + fsnol = 99999 + fsnos = 99999 + fsotl = 99999 + ftsfl = 99999 + ftsfs = 90 + fvetl = 99999 + fvmnl = 99999 + fvmxl = 99999 + landice = .true. + ldebug = .false. +/ + +&namsfc_dict + fnabsc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.maximum_snow_albedo.tileX.nc' + fnalbc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.snowfree_albedo.tileX.nc' + fnalbc2 = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.facsf.tileX.nc' + fnslpc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.slope_type.tileX.nc' + fnsotc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.soil_type.tileX.nc' + fntg3c = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.substrate_temperature.tileX.nc' + fnvegc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.vegetation_greenness.tileX.nc' + fnvetc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.vegetation_type.tileX.nc' + fnvmnc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.vegetation_greenness.tileX.nc' + fnvmxc = '/lfs/h2/emc/global/noscrub/lin.gan/para/packages/aqm.v7.0.75/fix/fix_lam/C793.vegetation_greenness.tileX.nc' +/ + +&surf_map_nml +/ diff --git a/parm/config/var_defns.sh b/parm/config/var_defns.sh new file mode 100644 index 0000000000..2deb56ed83 --- /dev/null +++ b/parm/config/var_defns.sh @@ -0,0 +1,1109 @@ +# [metadata] +description='config for Online-CMAQ, AQM_NA_13km, real-time, NCO mode on WCOSS2' +version='1.0' + +# [user] +RUN_ENVIR='nco' +MACHINE='WCOSS2' +export USHdir=${HOMEaqm}/ush +export SCRIPTSdir=${HOMEaqm}/scripts +export JOBSdir=${HOMEaqm}/jobs +export SORCdir=${HOMEaqm}/sorc +export PARMdir=${HOMEaqm}/parm +export EXECdir=${HOMEaqm}/exec +export VX_CONFIG_DIR=${HOMEaqm}/parm +export UFS_WTHR_MDL_DIR=${HOMEaqm}/sorc/ufs-weather-model +export ARL_NEXUS_DIR=${HOMEaqm}/sorc/arl_nexus + + +#HOMEaqm='${HOMEaqm}' +#export USHdir='${HOMEaqm}/ush' +#export SCRIPTSdir='${HOMEaqm}/scripts' +#export JOBSdir='${HOMEaqm}/jobs' +#export SORCdir='${HOMEaqm}/sorc' +#export PARMdir='${HOMEaqm}/parm' +#export EXECdir='${HOMEaqm}/exec' +#export VX_CONFIG_DIR='${HOMEaqm}/parm' +#export UFS_WTHR_MDL_DIR='${HOMEaqm}/sorc/ufs-weather-model' +#export ARL_NEXUS_DIR='${HOMEaqm}/sorc/arl_nexus' + +# [platform] +WORKFLOW_MANAGER='ecflow' +NCORES_PER_NODE='128' +TASKTHROTTLE='1000' +BUILD_MOD_FN='build_wcoss2_intel' +WFLOW_MOD_FN='wflow_wcoss2' +BUILD_VER_FN='build.ver.wcoss2' +RUN_VER_FN='run.ver.wcoss2' +SCHED='pbspro' +PARTITION_DEFAULT='' +QUEUE_DEFAULT='dev' +PARTITION_HPSS='' +QUEUE_HPSS='dev' +PARTITION_FCST='' +QUEUE_FCST='dev' +RUN_CMD_SERIAL='time' +RUN_CMD_UTILS='mpiexec -n ${nprocs}' +RUN_CMD_FCST='mpiexec -n ${PE_MEMBER01} -ppn ${PPN_RUN_FCST} --cpu-bind core -depth ${OMP_NUM_THREADS_RUN_FCST}' +RUN_CMD_POST='mpiexec -n ${nprocs}' +RUN_CMD_PRDGEN='mpiexec -n ${nprocs} --cpu-bind core cfp' +RUN_CMD_AQM='mpiexec -n ${nprocs} -ppn ${ppn_run_aqm} --cpu-bind core -depth ${omp_num_threads_run_aqm}' +RUN_CMD_AQMLBC='mpiexec -n ${NUMTS}' +SCHED_NATIVE_CMD='-l place=excl' +CCPA_OBS_DIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/obs_data/ccpa/proc' +MRMS_OBS_DIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/obs_data/mrms/proc' +NDAS_OBS_DIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/obs_data/ndas/proc' +DOMAIN_PREGEN_BASEDIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/FV3LAM_pregen' +PRE_TASK_CMDS='{ ulimit -s unlimited; ulimit -a; }' +TEST_EXTRN_MDL_SOURCE_BASEDIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/input_model_data' +TEST_PREGEN_BASEDIR='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/FV3LAM_pregen' +TEST_ALT_EXTRN_MDL_SYSBASEDIR_ICS='' +TEST_ALT_EXTRN_MDL_SYSBASEDIR_LBCS='' +TEST_VX_FCST_INPUT_BASEDIR='' +FIXgsm='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/fix/fix_am' +FIXaer='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/fix/fix_aer' +FIXlut='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/fix/fix_lut' +FIXorg='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/fix/fix_orog' +FIXsfc='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/fix/fix_sfc_climo' +FIXshp='/lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/NaturalEarth' +EXTRN_MDL_DATA_STORES='hpss aws nomads' +COMINairnow='/lfs/h1/ops/prod/dcom' + +# [workflow] +RELATIVE_LINK_FLAG='--relative' +USE_CRON_TO_RELAUNCH='TRUE' +CRON_RELAUNCH_INTVL_MNTS='3' +EXPT_BASEDIR=${HOMEaqm} +EXPT_SUBDIR='parm/config' +EXEC_SUBDIR='exec' +EXPTDIR=${HOMEaqm}/parm/config +DOT_OR_USCORE='_' +EXPT_CONFIG_FN='config.yaml' +CONSTANTS_FN='constants.yaml' +RGNL_GRID_NML_FN='regional_grid.nml' +FV3_NML_BASE_SUITE_FN='input.nml.FV3' +FV3_NML_YAML_CONFIG_FN='FV3.input.yml' +FV3_NML_BASE_ENS_FN='input.nml.base_ens' +FV3_NML_FN='input.nml' +FV3_EXEC_FN='ufs_model' +DATA_TABLE_FN='data_table' +DIAG_TABLE_FN='diag_table' +FIELD_TABLE_FN='field_table' +DIAG_TABLE_TMPL_FN='diag_table_aqm.FV3_GFS_v16' +FIELD_TABLE_TMPL_FN='field_table_aqm.FV3_GFS_v16' +MODEL_CONFIG_FN='model_configure' +NEMS_CONFIG_FN='nems.configure' +AQM_RC_FN='aqm.rc' +AQM_RC_TMPL_FN='aqm.rc' +FV3_NML_BASE_SUITE_FP=${HOMEaqm}/parm/input.nml.FV3 +FV3_NML_YAML_CONFIG_FP=${HOMEaqm}/parm/FV3.input.yml +FV3_NML_BASE_ENS_FP=${HOMEaqm}/parm/config/input.nml.base_ens +DATA_TABLE_TMPL_FP=${HOMEaqm}/parm/data_table +DIAG_TABLE_TMPL_FP=${HOMEaqm}/parm/diag_table_aqm.FV3_GFS_v16 +FIELD_TABLE_TMPL_FP=${HOMEaqm}/parm/field_table_aqm.FV3_GFS_v16 +MODEL_CONFIG_TMPL_FP=${HOMEaqm}/parm/model_configure +NEMS_CONFIG_TMPL_FP=${HOMEaqm}/parm/nems.configure +AQM_RC_TMPL_FP=${HOMEaqm}/parm/aqm.rc +DATA_TABLE_FP=${HOMEaqm}/parm/config/data_table +FIELD_TABLE_FP=${HOMEaqm}/parm/config/field_table +NEMS_CONFIG_FP=${HOMEaqm}/parm/config/nems.configure +FV3_NML_FP=${HOMEaqm}/parm/config/input.nml +FCST_MODEL='ufs-weather-model' +WFLOW_XML_FN='FV3LAM_wflow.xml' +GLOBAL_VAR_DEFNS_FN='var_defns.sh' +EXTRN_MDL_VAR_DEFNS_FN='extrn_mdl_var_defns' +WFLOW_LAUNCH_SCRIPT_FN='launch_FV3LAM_wflow.sh' +WFLOW_LAUNCH_LOG_FN='log.launch_FV3LAM_wflow' +export GLOBAL_VAR_DEFNS_FP='${HOMEaqm}/parm/config/var_defns.sh' +WFLOW_LAUNCH_SCRIPT_FP='${HOMEaqm}/ush/launch_FV3LAM_wflow.sh' +WFLOW_LAUNCH_LOG_FP='${HOMEaqm}/parm/config/log.launch_FV3LAM_wflow' +FIXdir=${HOMEaqm}/fix +FIXam=${HOMEaqm}/fix/fix_am +FIXclim=${HOMEaqm}/fix/fix_clim +FIXlam=${HOMEaqm}/fix/fix_lam +THOMPSON_MP_CLIMO_FN='Thompson_MP_MONTHLY_CLIMO.nc' +THOMPSON_MP_CLIMO_FP='${HOMEaqm}/fix/fix_am/Thompson_MP_MONTHLY_CLIMO.nc' +CCPP_PHYS_SUITE='FV3_GFS_v16' +CCPP_PHYS_SUITE_FN='suite_FV3_GFS_v16.xml' +CCPP_PHYS_SUITE_IN_CCPP_FP='${HOMEaqm}/sorc/ufs-weather-model/FV3/ccpp/suites/suite_FV3_GFS_v16.xml' +CCPP_PHYS_SUITE_FP='${HOMEaqm}/sorc/ufs-weather-model/FV3/ccpp/suites/suite_FV3_GFS_v16.xml' +FIELD_DICT_FN='fd_nems.yaml' +FIELD_DICT_IN_UWM_FP='${HOMEaqm}/sorc/ufs-weather-model/tests/parm/fd_nems.yaml' +FIELD_DICT_FP='${HOMEaqm}/sorc/ufs-weather-model/tests/parm/fd_nems.yaml' +GRID_GEN_METHOD='ESGgrid' +PREDEF_GRID_NAME='AQM_NA_13km' +DATE_FIRST_CYCL='202304250000' +DATE_LAST_CYCL='209904251800' +INCR_CYCL_FREQ='6' +FCST_LEN_HRS='-1' +FCST_LEN_CYCL=( "6" "72" "72" "6" ) +PREEXISTING_DIR_METHOD='rename' +VERBOSE='TRUE' +DEBUG='FALSE' +COMPILER='intel' +SYMLINK_FIX_FILES='TRUE' +DO_REAL_TIME='TRUE' +COLDSTART='FALSE' +FCST_LEN_CYCL_ALL=( "6" "72" "72" "6" ) +RES_IN_FIXLAM_FILENAMES='793' +CRES='C793' +SDF_USES_RUC_LSM='FALSE' +SDF_USES_THOMPSON_MP='FALSE' + +# [nco] +envir='prod' +NET='aqm' +RUN='aqm' +model_ver='v7.0' +COMIN_BASEDIR='${COMaqm}' +COMOUT_BASEDIR='${COMaqm}' +DBNROOT='' +SENDECF='FALSE' +SENDDBN='FALSE' +SENDDBN_NTC='FALSE' +SENDCOM='FALSE' +SENDWEB='FALSE' +# KEEPDATA='TRUE' +MAILTO='' +MAILCC='' + +# [workflow_switches] +RUN_TASK_MAKE_GRID='FALSE' +RUN_TASK_MAKE_OROG='FALSE' +RUN_TASK_MAKE_SFC_CLIMO='FALSE' +RUN_TASK_GET_EXTRN_ICS='TRUE' +RUN_TASK_GET_EXTRN_LBCS='TRUE' +RUN_TASK_MAKE_ICS='TRUE' +RUN_TASK_MAKE_LBCS='TRUE' +RUN_TASK_RUN_FCST='TRUE' +RUN_TASK_RUN_POST='TRUE' +RUN_TASK_RUN_PRDGEN='FALSE' +RUN_TASK_GET_OBS_CCPA='FALSE' +RUN_TASK_GET_OBS_MRMS='FALSE' +RUN_TASK_GET_OBS_NDAS='FALSE' +RUN_TASK_VX_GRIDSTAT='FALSE' +RUN_TASK_VX_POINTSTAT='FALSE' +RUN_TASK_VX_ENSGRID='FALSE' +RUN_TASK_VX_ENSPOINT='FALSE' +RUN_TASK_PLOT_ALLVARS='FALSE' +RUN_TASK_AQM_ICS='TRUE' +RUN_TASK_AQM_LBCS='TRUE' +RUN_TASK_NEXUS_GFS_SFC='TRUE' +RUN_TASK_NEXUS_EMISSION='TRUE' +RUN_TASK_FIRE_EMISSION='TRUE' +RUN_TASK_POINT_SOURCE='TRUE' +RUN_TASK_PRE_POST_STAT='TRUE' +RUN_TASK_POST_STAT_O3='TRUE' +RUN_TASK_POST_STAT_PM25='TRUE' +RUN_TASK_BIAS_CORRECTION_O3='TRUE' +RUN_TASK_BIAS_CORRECTION_PM25='TRUE' + +# [task_make_grid] +TN_MAKE_GRID='make_grid' +NNODES_MAKE_GRID='1' +PPN_MAKE_GRID='24' +WTIME_MAKE_GRID='00:20:00' +MAXTRIES_MAKE_GRID='2' +GRID_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/DOMAIN_DATA/AQM_NA_13km' +ESGgrid_LON_CTR='-118.0' +ESGgrid_LAT_CTR='50.0' +ESGgrid_DELX='13000.0' +ESGgrid_DELY='13000.0' +ESGgrid_NX='800' +ESGgrid_NY='544' +ESGgrid_WIDE_HALO_WIDTH='6' +ESGgrid_PAZI='0.0' +GFDLgrid_LON_T6_CTR='' +GFDLgrid_LAT_T6_CTR='' +GFDLgrid_NUM_CELLS='' +GFDLgrid_STRETCH_FAC='' +GFDLgrid_REFINE_RATIO='' +GFDLgrid_ISTART_OF_RGNL_DOM_ON_T6G='' +GFDLgrid_IEND_OF_RGNL_DOM_ON_T6G='' +GFDLgrid_JSTART_OF_RGNL_DOM_ON_T6G='' +GFDLgrid_JEND_OF_RGNL_DOM_ON_T6G='' +GFDLgrid_USE_NUM_CELLS_IN_FILENAMES='' + +# [task_make_orog] +TN_MAKE_OROG='make_orog' +NNODES_MAKE_OROG='1' +PPN_MAKE_OROG='24' +WTIME_MAKE_OROG='00:20:00' +MAXTRIES_MAKE_OROG='2' +KMP_AFFINITY_MAKE_OROG='disabled' +OMP_NUM_THREADS_MAKE_OROG='6' +OMP_STACKSIZE_MAKE_OROG='2048m' +OROG_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/DOMAIN_DATA/AQM_NA_13km' + +# [task_make_sfc_climo] +TN_MAKE_SFC_CLIMO='make_sfc_climo' +NNODES_MAKE_SFC_CLIMO='2' +PPN_MAKE_SFC_CLIMO='24' +WTIME_MAKE_SFC_CLIMO='00:20:00' +MAXTRIES_MAKE_SFC_CLIMO='2' +KMP_AFFINITY_MAKE_SFC_CLIMO='scatter' +OMP_NUM_THREADS_MAKE_SFC_CLIMO='1' +OMP_STACKSIZE_MAKE_SFC_CLIMO='1024m' +SFC_CLIMO_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/DOMAIN_DATA/AQM_NA_13km' + +# [task_get_extrn_ics] +TN_GET_EXTRN_ICS='get_extrn_ics' +NNODES_GET_EXTRN_ICS='1' +PPN_GET_EXTRN_ICS='1' +MEM_GET_EXTRN_ICS='2G' +WTIME_GET_EXTRN_ICS='00:45:00' +MAXTRIES_GET_EXTRN_ICS='1' +EXTRN_MDL_NAME_ICS='FV3GFS' +EXTRN_MDL_ICS_OFFSET_HRS='6' +FV3GFS_FILE_FMT_ICS='netcdf' +EXTRN_MDL_SYSBASEDIR_ICS='compath.py ${envir}/gfs/${gfs_ver}/gfs.${PDYext}/${cycext}/atmos' +USE_USER_STAGED_EXTRN_FILES='FALSE' +EXTRN_MDL_SOURCE_BASEDIR_ICS='' +EXTRN_MDL_FILES_ICS='' + +# [task_get_extrn_lbcs] +TN_GET_EXTRN_LBCS='get_extrn_lbcs' +NNODES_GET_EXTRN_LBCS='1' +PPN_GET_EXTRN_LBCS='1' +MEM_GET_EXTRN_LBCS='2G' +WTIME_GET_EXTRN_LBCS='02:00:00' +MAXTRIES_GET_EXTRN_LBCS='1' +EXTRN_MDL_NAME_LBCS='FV3GFS' +LBC_SPEC_INTVL_HRS='6' +EXTRN_MDL_LBCS_OFFSET_HRS='6' +FV3GFS_FILE_FMT_LBCS='netcdf' +EXTRN_MDL_SYSBASEDIR_LBCS='compath.py ${envir}/gfs/${gfs_ver}/gfs.${PDYext}/${cycext}/atmos' +USE_USER_STAGED_EXTRN_FILES='FALSE' +EXTRN_MDL_SOURCE_BASEDIR_LBCS='' +EXTRN_MDL_FILES_LBCS='' + +# [task_make_ics] +TN_MAKE_ICS='make_ics' +NNODES_MAKE_ICS='4' +PPN_MAKE_ICS='12' +WTIME_MAKE_ICS='00:30:00' +MAXTRIES_MAKE_ICS='1' +KMP_AFFINITY_MAKE_ICS='scatter' +OMP_NUM_THREADS_MAKE_ICS='1' +OMP_STACKSIZE_MAKE_ICS='1024m' +USE_FVCOM='FALSE' +FVCOM_WCSTART='cold' +FVCOM_DIR='' +FVCOM_FILE='fvcom.nc' + +# [task_make_lbcs] +TN_MAKE_LBCS='make_lbcs' +NNODES_MAKE_LBCS='1' +PPN_MAKE_LBCS='128' +WTIME_MAKE_LBCS='00:30:00' +MAXTRIES_MAKE_LBCS='1' +KMP_AFFINITY_MAKE_LBCS='scatter' +OMP_NUM_THREADS_MAKE_LBCS='1' +OMP_STACKSIZE_MAKE_LBCS='1024m' + +# [task_run_fcst] +TN_RUN_FCST='run_fcst' +NNODES_RUN_FCST='14' +PPN_RUN_FCST='128' +WTIME_RUN_FCST='04:00:00' +MAXTRIES_RUN_FCST='1' +FV3_EXEC_FP='${HOMEaqm}/exec/ufs_model' +KMP_AFFINITY_RUN_FCST='scatter' +OMP_NUM_THREADS_RUN_FCST='1' +OMP_STACKSIZE_RUN_FCST='512m' +DT_ATMOS='180' +FHROT='0' +RESTART_INTERVAL='6 24 42 60' +WRITE_DOPOST='FALSE' +LAYOUT_X='50' +LAYOUT_Y='34' +BLOCKSIZE='16' +QUILTING='TRUE' +PRINT_ESMF='FALSE' +PE_MEMBER01='1792' +WRTCMP_write_groups='2' +WRTCMP_write_tasks_per_group='46' +WRTCMP_output_grid='rotated_latlon' +WRTCMP_cen_lon='-118.0' +WRTCMP_cen_lat='50.0' +WRTCMP_lon_lwr_left='-45.25' +WRTCMP_lat_lwr_left='-28.5' +WRTCMP_lon_upr_rght='45.25' +WRTCMP_lat_upr_rght='28.5' +WRTCMP_dlon='0.116908139' +WRTCMP_dlat='0.116908139' +WRTCMP_stdlat1='' +WRTCMP_stdlat2='' +WRTCMP_nx='' +WRTCMP_ny='' +WRTCMP_dx='' +WRTCMP_dy='' +USE_MERRA_CLIMO='FALSE' +DO_FCST_RESTART='TRUE' + +# [task_run_post] +TN_RUN_POST='run_post' +NNODES_RUN_POST='2' +PPN_RUN_POST='24' +WTIME_RUN_POST='00:15:00' +MAXTRIES_RUN_POST='2' +KMP_AFFINITY_RUN_POST='scatter' +OMP_NUM_THREADS_RUN_POST='1' +OMP_STACKSIZE_RUN_POST='1024m' +SUB_HOURLY_POST='FALSE' +DT_SUBHOURLY_POST_MNTS='0' +USE_CUSTOM_POST_CONFIG_FILE='FALSE' +CUSTOM_POST_CONFIG_FP='' +POST_OUTPUT_DOMAIN_NAME='793' +TESTBED_FIELDS_FN='' + +# [task_run_prdgen] +TN_RUN_PRDGEN='run_prdgen' +NNODES_RUN_PRDGEN='1' +PPN_RUN_PRDGEN='22' +WTIME_RUN_PRDGEN='00:30:00' +MAXTRIES_RUN_PRDGEN='1' +KMP_AFFINITY_RUN_PRDGEN='scatter' +OMP_NUM_THREADS_RUN_PRDGEN='1' +OMP_STACKSIZE_RUN_PRDGEN='1024m' +DO_PARALLEL_PRDGEN='FALSE' +ADDNL_OUTPUT_GRIDS=( "" ) + +# [task_plot_allvars] +TN_PLOT_ALLVARS='plot_allvars' +NNODES_PLOT_ALLVARS='1' +PPN_PLOT_ALLVARS='24' +WTIME_PLOT_ALLVARS='01:00:00' +MAXTRIES_PLOT_ALLVARS='1' +COMOUT_REF='' +PLOT_FCST_START='0' +PLOT_FCST_INC='3' +PLOT_FCST_END='' +PLOT_DOMAINS=( "conus" ) + +# [task_get_obs_ccpa] +TN_GET_OBS_CCPA='get_obs_ccpa' +NNODES_GET_OBS_CCPA='1' +PPN_GET_OBS_CCPA='1' +MEM_GET_OBS_CCPA='2G' +WTIME_GET_OBS_CCPA='00:45:00' +MAXTRIES_GET_OBS_CCPA='1' + +# [task_get_obs_mrms] +TN_GET_OBS_MRMS='get_obs_mrms' +NNODES_GET_OBS_MRMS='1' +PPN_GET_OBS_MRMS='1' +MEM_GET_OBS_MRMS='2G' +WTIME_GET_OBS_MRMS='00:45:00' +MAXTRIES_GET_OBS_MRMS='1' + +# [task_get_obs_ndas] +TN_GET_OBS_NDAS='get_obs_ndas' +NNODES_GET_OBS_NDAS='1' +PPN_GET_OBS_NDAS='1' +MEM_GET_OBS_NDAS='2G' +WTIME_GET_OBS_NDAS='02:00:00' +MAXTRIES_GET_OBS_NDAS='1' + +# [task_tn_run_met_pb2nc_obs] +TN_RUN_MET_PB2NC_OBS='run_MET_Pb2nc_obs' +NNODES_RUN_MET_PB2NC_OBS='1' +PPN_RUN_MET_PB2NC_OBS='1' +MEM_RUN_MET_PB2NC_OBS='2G' +WTIME_RUN_MET_PB2NC_OBS='00:30:00' +MAXTRIES_RUN_MET_PB2NC_OBS='2' + +# [task_tn_run_met_pcpcombine] +TN_RUN_MET_PCPCOMBINE='run_MET_PcpCombine' +NNODES_RUN_MET_PCPCOMBINE_OBS='1' +PPN_RUN_MET_PCPCOMBINE_OBS='1' +MEM_RUN_MET_PCPCOMBINE_OBS='2G' +WTIME_RUN_MET_PCPCOMBINE_OBS='00:30:00' +MAXTRIES_RUN_MET_PCPCOMBINE_OBS='2' +NNODES_RUN_MET_PCPCOMBINE_FCST='1' +PPN_RUN_MET_PCPCOMBINE_FCST='1' +MEM_RUN_MET_PCPCOMBINE_FCST='2G' +WTIME_RUN_MET_PCPCOMBINE_FCST='00:30:00' +MAXTRIES_RUN_MET_PCPCOMBINE_FCST='2' + +# [task_run_met_gridstat_vx_apcp01h] +TN_RUN_MET_GRIDSTAT_VX_APCP01H='run_MET_GridStat_vx_APCP01h' +NNODES_RUN_MET_GRIDSTAT_VX_APCP01H='1' +PPN_RUN_MET_GRIDSTAT_VX_APCP01H='1' +MEM_RUN_MET_GRIDSTAT_VX_APCP01H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_APCP01H='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_APCP01H='2' + +# [task_run_met_gridstat_vx_apcp03h] +TN_RUN_MET_GRIDSTAT_VX_APCP03H='run_MET_GridStat_vx_APCP03h' +NNODES_RUN_MET_GRIDSTAT_VX_APCP03H='1' +PPN_RUN_MET_GRIDSTAT_VX_APCP03H='1' +MEM_RUN_MET_GRIDSTAT_VX_APCP03H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_APCP03H='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_APCP03H='2' + +# [task_run_met_gridstat_vx_apcp06h] +TN_RUN_MET_GRIDSTAT_VX_APCP06H='run_MET_GridStat_vx_APCP06h' +NNODES_RUN_MET_GRIDSTAT_VX_APCP06H='1' +PPN_RUN_MET_GRIDSTAT_VX_APCP06H='1' +MEM_RUN_MET_GRIDSTAT_VX_APCP06H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_APCP06H='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_APCP06H='2' + +# [task_run_met_gridstat_vx_apcp24h] +TN_RUN_MET_GRIDSTAT_VX_APCP24H='run_MET_GridStat_vx_APCP24h' +NNODES_RUN_MET_GRIDSTAT_VX_APCP24H='1' +PPN_RUN_MET_GRIDSTAT_VX_APCP24H='1' +MEM_RUN_MET_GRIDSTAT_VX_APCP24H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_APCP24H='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_APCP24H='2' + +# [task_run_met_gridstat_vx_refc] +TN_RUN_MET_GRIDSTAT_VX_REFC='run_MET_GridStat_vx_REFC' +NNODES_RUN_MET_GRIDSTAT_VX_REFC='1' +PPN_RUN_MET_GRIDSTAT_VX_REFC='1' +MEM_RUN_MET_GRIDSTAT_VX_REFC='2G' +WTIME_RUN_MET_GRIDSTAT_VX_REFC='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_REFC='2' + +# [task_run_met_gridstat_vx_retop] +TN_RUN_MET_GRIDSTAT_VX_RETOP='run_MET_GridStat_vx_RETOP' +NNODES_RUN_MET_GRIDSTAT_VX_RETOP='1' +PPN_RUN_MET_GRIDSTAT_VX_RETOP='1' +MEM_RUN_MET_GRIDSTAT_VX_RETOP='2G' +WTIME_RUN_MET_GRIDSTAT_VX_RETOP='02:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_RETOP='2' + +# [task_run_met_pointstat_vx_sfc] +TN_RUN_MET_POINTSTAT_VX_SFC='run_MET_PointStat_vx_SFC' +NNODES_RUN_MET_POINTSTAT_VX_SFC='1' +PPN_RUN_MET_POINTSTAT_VX_SFC='1' +MEM_RUN_MET_POINTSTAT_VX_SFC='2G' +WTIME_RUN_MET_POINTSTAT_VX_SFC='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_SFC='2' + +# [task_run_met_pointstat_vx_upa] +TN_RUN_MET_POINTSTAT_VX_UPA='run_MET_PointStat_vx_UPA' +NNODES_RUN_MET_POINTSTAT_VX_UPA='1' +PPN_RUN_MET_POINTSTAT_VX_UPA='1' +MEM_RUN_MET_POINTSTAT_VX_UPA='2G' +WTIME_RUN_MET_POINTSTAT_VX_UPA='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_UPA='2' + +# [task_run_met_ensemblestat_vx_apcp01h] +TN_RUN_MET_ENSEMBLESTAT_VX_APCP01H='run_MET_EnsembleStat_vx_APCP01h' +NNODES_RUN_MET_ENSEMBLESTAT_VX_APCP01H='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_APCP01H='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_APCP01H='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_APCP01H='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_APCP01H='2' + +# [task_run_met_ensemblestat_vx_apcp03h] +TN_RUN_MET_ENSEMBLESTAT_VX_APCP03H='run_MET_EnsembleStat_vx_APCP03h' +NNODES_RUN_MET_ENSEMBLESTAT_VX_APCP03H='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_APCP03H='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_APCP03H='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_APCP03H='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_APCP03H='2' + +# [task_run_met_ensemblestat_vx_apcp06h] +TN_RUN_MET_ENSEMBLESTAT_VX_APCP06H='run_MET_EnsembleStat_vx_APCP06h' +NNODES_RUN_MET_ENSEMBLESTAT_VX_APCP06H='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_APCP06H='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_APCP06H='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_APCP06H='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_APCP06H='2' + +# [task_run_met_ensemblestat_vx_apcp24h] +TN_RUN_MET_ENSEMBLESTAT_VX_APCP24H='run_MET_EnsembleStat_vx_APCP24h' +NNODES_RUN_MET_ENSEMBLESTAT_VX_APCP24H='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_APCP24H='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_APCP24H='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_APCP24H='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_APCP24H='2' + +# [task_run_met_ensemblestat_vx_refc] +TN_RUN_MET_ENSEMBLESTAT_VX_REFC='run_MET_EnsembleStat_vx_REFC' +NNODES_RUN_MET_ENSEMBLESTAT_VX_REFC='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_REFC='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_REFC='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_REFC='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_REFC='2' + +# [task_run_met_ensemblestat_vx_retop] +TN_RUN_MET_ENSEMBLESTAT_VX_RETOP='run_MET_EnsembleStat_vx_RETOP' +NNODES_RUN_MET_ENSEMBLESTAT_VX_RETOP='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_RETOP='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_RETOP='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_RETOP='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_RETOP='2' + +# [task_run_met_ensemblestat_vx_sfc] +TN_RUN_MET_ENSEMBLESTAT_VX_SFC='run_MET_EnsembleStat_vx_SFC' +NNODES_RUN_MET_ENSEMBLESTAT_VX_SFC='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_SFC='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_SFC='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_SFC='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_SFC='2' + +# [task_run_met_ensemblestat_vx_upa] +TN_RUN_MET_ENSEMBLESTAT_VX_UPA='run_MET_EnsembleStat_vx_UPA' +NNODES_RUN_MET_ENSEMBLESTAT_VX_UPA='1' +PPN_RUN_MET_ENSEMBLESTAT_VX_UPA='1' +MEM_RUN_MET_ENSEMBLESTAT_VX_UPA='2G' +WTIME_RUN_MET_ENSEMBLESTAT_VX_UPA='01:00:00' +MAXTRIES_RUN_MET_ENSEMBLESTAT_VX_UPA='2' + +# [task_run_met_gridstat_vx_ensmean_apcp01h] +TN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='run_MET_GridStat_vx_ensmean_APCP01h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP01H='2' + +# [task_run_met_gridstat_vx_ensmean_apcp03h] +TN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='run_MET_GridStat_vx_ensmean_APCP03h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP03H='2' + +# [task_run_met_gridstat_vx_ensmean_apcp06h] +TN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='run_MET_GridStat_vx_ensmean_APCP06h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP06H='2' + +# [task_run_met_gridstat_vx_ensmean_apcp24h] +TN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='run_MET_GridStat_vx_ensmean_APCP24h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSMEAN_APCP24H='2' + +# [task_run_met_pointstat_vx_ensmean_sfc] +TN_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='run_MET_PointStat_vx_ensmean_SFC' +NNODES_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='1' +PPN_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='1' +MEM_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='2G' +WTIME_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_ENSMEAN_SFC='2' + +# [task_run_met_pointstat_vx_ensmean_upa] +TN_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='run_MET_PointStat_vx_ensmean_UPA' +NNODES_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='1' +PPN_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='1' +MEM_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='2G' +WTIME_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_ENSMEAN_UPA='2' + +# [task_run_met_gridstat_vx_ensprob_apcp01h] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='run_MET_GridStat_vx_ensprob_APCP01h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP01H='2' + +# [task_run_met_gridstat_vx_ensprob_apcp03h] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='run_MET_GridStat_vx_ensprob_APCP03h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP03H='2' + +# [task_run_met_gridstat_vx_ensprob_apcp06h] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='run_MET_GridStat_vx_ensprob_APCP06h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP06H='2' + +# [task_run_met_gridstat_vx_ensprob_apcp24h] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='run_MET_GridStat_vx_ensprob_APCP24h' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_APCP24H='2' + +# [task_run_met_gridstat_vx_ensprob_refc] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='run_MET_GridStat_vx_ensprob_REFC' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_REFC='2' + +# [task_run_met_gridstat_vx_ensprob_retop] +TN_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='run_MET_GridStat_vx_ensprob_RETOP' +NNODES_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='1' +PPN_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='1' +MEM_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='2G' +WTIME_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='01:00:00' +MAXTRIES_RUN_MET_GRIDSTAT_VX_ENSPROB_RETOP='2' + +# [task_run_met_pointstat_vx_ensprob_sfc] +TN_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='run_MET_PointStat_vx_ensprob_SFC' +NNODES_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='1' +PPN_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='1' +MEM_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='2G' +WTIME_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_ENSPROB_SFC='2' + +# [task_run_met_pointstat_vx_ensprob_upa] +TN_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='run_MET_PointStat_vx_ensprob_UPA' +NNODES_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='1' +PPN_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='1' +MEM_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='2G' +WTIME_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='01:00:00' +MAXTRIES_RUN_MET_POINTSTAT_VX_ENSPROB_UPA='2' + +# [task_aqm_ics] +TN_AQM_ICS='aqm_ics' +NNODES_AQM_ICS='1' +PPN_AQM_ICS='1' +WTIME_AQM_ICS='00:30:00' +MAXTRIES_AQM_ICS='2' + +# [task_aqm_lbcs] +TN_AQM_LBCS='aqm_lbcs' +NNODES_AQM_LBCS='1' +PPN_AQM_LBCS='24' +WTIME_AQM_LBCS='01:00:00' +MAXTRIES_AQM_LBCS='2' + +# [task_nexus_gfs_sfc] +TN_NEXUS_GFS_SFC='nexus_gfs_sfc' +NNODES_NEXUS_GFS_SFC='1' +PPN_NEXUS_GFS_SFC='1' +MEM_NEXUS_GFS_SFC='2G' +WTIME_NEXUS_GFS_SFC='00:30:00' +MAXTRIES_NEXUS_GFS_SFC='2' +NEXUS_GFS_SFC_OFFSET_HRS='6' + +# [task_nexus_emission] +TN_NEXUS_EMISSION='nexus_emission' +NNODES_NEXUS_EMISSION='4' +PPN_NEXUS_EMISSION='64' +WTIME_NEXUS_EMISSION='01:00:00' +MAXTRIES_NEXUS_EMISSION='2' +KMP_AFFINITY_NEXUS_EMISSION='scatter' +OMP_NUM_THREADS_NEXUS_EMISSION='2' +OMP_STACKSIZE_NEXUS_EMISSION='1024m' + +# [task_nexus_post_split] +TN_NEXUS_POST_SPLIT='nexus_post_split' +NNODES_NEXUS_POST_SPLIT='1' +PPN_NEXUS_POST_SPLIT='1' +WTIME_NEXUS_POST_SPLIT='00:30:00' +MAXTRIES_NEXUS_POST_SPLIT='2' + +# [task_fire_emission] +TN_FIRE_EMISSION='fire_emission' +NNODES_FIRE_EMISSION='1' +PPN_FIRE_EMISSION='1' +MEM_FIRE_EMISSION='2G' +WTIME_FIRE_EMISSION='00:30:00' +MAXTRIES_FIRE_EMISSION='2' +AQM_FIRE_FILE_OFFSET_HRS='0' + +# [task_point_source] +TN_POINT_SOURCE='point_source' +NNODES_POINT_SOURCE='1' +PPN_POINT_SOURCE='1' +WTIME_POINT_SOURCE='01:00:00' +MAXTRIES_POINT_SOURCE='2' + +# [task_pre_post_stat] +TN_PRE_POST_STAT='pre_post_stat' +NNODES_PRE_POST_STAT='1' +PPN_PRE_POST_STAT='1' +WTIME_PRE_POST_STAT='00:30:00' +MAXTRIES_PRE_POST_STAT='2' + +# [task_post_stat_o3] +TN_POST_STAT_O3='post_stat_o3' +NNODES_POST_STAT_O3='1' +PPN_POST_STAT_O3='1' +MEM_POST_STAT_O3='120G' +WTIME_POST_STAT_O3='00:30:00' +MAXTRIES_POST_STAT_O3='2' +KMP_AFFINITY_POST_STAT_O3='scatter' +OMP_NUM_THREADS_POST_STAT_O3='1' +OMP_STACKSIZE_POST_STAT_O3='2056M' + +# [task_post_stat_pm25] +TN_POST_STAT_PM25='post_stat_pm25' +NNODES_POST_STAT_PM25='1' +PPN_POST_STAT_PM25='1' +MEM_POST_STAT_PM25='120G' +WTIME_POST_STAT_PM25='00:30:00' +MAXTRIES_POST_STAT_PM25='2' +KMP_AFFINITY_POST_STAT_PM25='scatter' +OMP_NUM_THREADS_POST_STAT_PM25='1' +OMP_STACKSIZE_POST_STAT_PM25='2056M' + +# [task_bias_correction_o3] +TN_BIAS_CORRECTION_O3='bias_correction_o3' +NNODES_BIAS_CORRECTION_O3='1' +PPN_BIAS_CORRECTION_O3='1' +MEM_BIAS_CORRECTION_O3='120G' +WTIME_BIAS_CORRECTION_O3='00:30:00' +MAXTRIES_BIAS_CORRECTION_O3='2' +KMP_AFFINITY_BIAS_CORRECTION_O3='scatter' +OMP_NUM_THREADS_BIAS_CORRECTION_O3='32' +OMP_STACKSIZE_BIAS_CORRECTION_O3='2056M' + +# [task_bias_correction_pm25] +TN_BIAS_CORRECTION_PM25='bias_correction_pm25' +NNODES_BIAS_CORRECTION_PM25='1' +PPN_BIAS_CORRECTION_PM25='1' +MEM_BIAS_CORRECTION_PM25='120G' +WTIME_BIAS_CORRECTION_PM25='00:30:00' +MAXTRIES_BIAS_CORRECTION_PM25='2' +KMP_AFFINITY_BIAS_CORRECTION_PM25='scatter' +OMP_NUM_THREADS_BIAS_CORRECTION_PM25='32' +OMP_STACKSIZE_BIAS_CORRECTION_PM25='2056M' + +# [global] +USE_CRTM='FALSE' +CRTM_DIR='' +DO_ENSEMBLE='FALSE' +NUM_ENS_MEMBERS='2' +ENSMEM_NAMES='mem%03d, " % m "mem%03d, " % m' +FV3_NML_ENSMEM_FPS='{% for mem in ENSMEM_NAMES %}{{ [EXPTDIR, "%s_%s" % FV3_NML_FN, mem]|path_join }}{% endfor %}' +ENS_TIME_LAG_HRS=( "0" "0" ) +DO_SHUM='FALSE' +DO_SPPT='FALSE' +DO_SKEB='FALSE' +ISEED_SPPT='1' +ISEED_SHUM='2' +ISEED_SKEB='3' +NEW_LSCALE='TRUE' +SHUM_MAG='-999.0' +SHUM_LSCALE='150000' +SHUM_TSCALE='21600' +SHUM_INT='3600' +SPPT_MAG='-999.0' +SPPT_LOGIT='TRUE' +SPPT_LSCALE='150000' +SPPT_TSCALE='21600' +SPPT_INT='3600' +SPPT_SFCLIMIT='TRUE' +SKEB_MAG='-999.0' +SKEB_LSCALE='150000' +SKEB_TSCALE='21600' +SKEB_INT='3600' +SKEBNORM='1' +SKEB_VDOF='10' +USE_ZMTNBLCK='FALSE' +DO_SPP='FALSE' +SPP_VAR_LIST=( \ +"pbl" \ +"sfc" \ +"mp" \ +"rad" \ +"gwd" \ +) +SPP_MAG_LIST=( \ +"0.2" \ +"0.2" \ +"0.75" \ +"0.2" \ +"0.2" \ +) +SPP_LSCALE=( \ +"150000.0" \ +"150000.0" \ +"150000.0" \ +"150000.0" \ +"150000.0" \ +) +SPP_TSCALE=( \ +"21600.0" \ +"21600.0" \ +"21600.0" \ +"21600.0" \ +"21600.0" \ +) +SPP_SIGTOP1=( \ +"0.1" \ +"0.1" \ +"0.1" \ +"0.1" \ +"0.1" \ +) +SPP_SIGTOP2=( \ +"0.025" \ +"0.025" \ +"0.025" \ +"0.025" \ +"0.025" \ +) +SPP_STDDEV_CUTOFF=( \ +"1.5" \ +"1.5" \ +"2.5" \ +"1.5" \ +"1.5" \ +) +ISEED_SPP=( \ +"4" \ +"5" \ +"6" \ +"7" \ +"8" \ +) +DO_LSM_SPP='FALSE' +LSM_SPP_TSCALE=( \ +"21600" \ +"21600" \ +"21600" \ +"21600" \ +"21600" \ +"21600" \ +"21600" \ +) +LSM_SPP_LSCALE=( \ +"150000" \ +"150000" \ +"150000" \ +"150000" \ +"150000" \ +"150000" \ +"150000" \ +) +ISEED_LSM_SPP=( "9" ) +LSM_SPP_VAR_LIST=( \ +"smc" \ +"vgf" \ +"alb" \ +"sal" \ +"emi" \ +"zol" \ +"stc" \ +) +LSM_SPP_MAG_LIST=( \ +"0.017" \ +"0.001" \ +"0.001" \ +"0.001" \ +"0.001" \ +"0.001" \ +"0.2" \ +) +HALO_BLEND='0' +N_VAR_SPP='0' +N_VAR_LNDP='0' +LNDP_TYPE='0' +LNDP_MODEL_TYPE='0' +FHCYC_LSM_SPP_OR_NOT='0' + +# [verification] +GET_OBS_LOCAL_MODULE_FN='get_obs' +OBS_CCPA_APCP01h_FN_TEMPLATE='{valid?fmt=%Y%m%d}/ccpa.t{valid?fmt=%H}z.01h.hrap.conus.gb2' +OBS_CCPA_APCPgt01h_FN_TEMPLATE='${OBS_CCPA_APCP01h_FN_TEMPLATE}_a${ACCUM_HH}h.nc' +OBS_NDAS_SFCorUPA_FN_TEMPLATE='prepbufr.ndas.{valid?fmt=%Y%m%d%H}' +OBS_NDAS_SFCorUPA_FN_METPROC_TEMPLATE='${OBS_NDAS_SFCorUPA_FN_TEMPLATE}.nc' +VX_LOCAL_MODULE_FN='run_vx' +RUN_TASKS_METVX_DET='FALSE' +RUN_TASKS_METVX_ENS='FALSE' +VX_FCST_MODEL_NAME='aqm.793' +VX_FIELDS=( \ +"APCP" \ +"REFC" \ +"RETOP" \ +"SFC" \ +"UPA" \ +) +VX_APCP_ACCUMS_HH=( "01" "03" "06" "24" ) +VX_FCST_INPUT_BASEDIR='${HOMEaqm}/parm/config' +FCST_SUBDIR_TEMPLATE='{init?fmt=%Y%m%d%H?shift=-${time_lag}}${SLASH_ENSMEM_SUBDIR_OR_NULL}/postprd' +FCST_FN_TEMPLATE='${NET}.t{init?fmt=%H?shift=-${time_lag}}z.prslev.f{lead?fmt=%HHH?shift=${time_lag}}.${POST_OUTPUT_DOMAIN_NAME}.grib2' +FCST_FN_METPROC_TEMPLATE='${NET}.t{init?fmt=%H}z.prslev.f{lead?fmt=%HHH}.${POST_OUTPUT_DOMAIN_NAME}_a${ACCUM_HH}h.nc' +NUM_MISSING_OBS_FILES_MAX='2' + +# [cpl_aqm_parm] +CPL_AQM='TRUE' +DO_AQM_DUST='TRUE' +DO_AQM_CANOPY='FALSE' +DO_AQM_PRODUCT='TRUE' +DO_AQM_CHEM_LBCS='TRUE' +DO_AQM_GEFS_LBCS='TRUE' +DO_AQM_SAVE_AIRNOW_HIST='FALSE' +DO_AQM_SAVE_FIRE='FALSE' +AQM_CONFIG_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/aqm/epa/data' +DCOMINbio='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/aqm/bio' +AQM_BIO_FILE='BEIS_RRFScmaq_C775.ncf' +DCOMINdust='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/FENGSHA' +AQM_DUST_FILE_PREFIX='FENGSHA_p8_10km_inputs' +AQM_DUST_FILE_SUFFIX='.nc' +DCOMINcanopy='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/canopy' +AQM_CANOPY_FILE_PREFIX='gfs.t12z.geo' +AQM_CANOPY_FILE_SUFFIX='.canopy_regrid.nc' +DCOMINfire='/lfs/h2/emc/physics/noscrub/kai.wang/RAVE_fire/RAVE_NA_NRT' +AQM_FIRE_FILE_PREFIX='Hourly_Emissions_regrid_NA_13km' +AQM_FIRE_FILE_SUFFIX='_h72.nc' +AQM_FIRE_ARCHV_DIR='/path/to/archive/dir/for/RAVE/on/HPSS' +AQM_RC_FIRE_FREQUENCY='hourly' +AQM_RC_PRODUCT_FN='aqm.prod.nc' +AQM_RC_PRODUCT_FREQUENCY='hourly' +DCOMINchem_lbcs='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/LBCS/AQM_NA13km_AM4_v1' +AQM_LBCS_FILES='am4_bndy.c793.2019.v1.nc' +DCOMINgefs='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GEFS_DATA' +AQM_GEFS_FILE_PREFIX='geaer' +AQM_GEFS_FILE_CYC='' +NEXUS_INPUT_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/nexus_emissions' +NEXUS_FIX_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/nexus/fix' +NEXUS_GRID_FN='grid_spec_793.nc' +NUM_SPLIT_NEXUS='6' +NEXUS_GFS_SFC_DIR='/lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GFS_DATA' +NEXUS_GFS_SFC_ARCHV_DIR='/NCEPPROD/hpssprod/runhistory' +DCOMINpt_src='/lfs/h2/emc/physics/noscrub/Youhua.Tang/nei2016v1-pt/v2023-01-PT' +DCOMINairnow='/lfs/h1/ops/prod/dcom' +# Need to define +COMINbicor='/lfs/h2/emc/global/noscrub/lin.gan/Bias_correction/aqmv7.0' +COMOUTbicor='/lfs/h2/emc/global/noscrub/lin.gan/Bias_correction/aqmv7.0' +AQM_AIRNOW_HIST_DIR='/lfs/h2/emc/global/noscrub/lin.gan/Bias_correction/aqmv7.0' + +# [constants] +PI_GEOM='3.141592653589793' +DEGS_PER_RADIAN='57.29577951308232' +RADIUS_EARTH='6371200.0' +SECS_PER_HOUR='3600.0' +GTYPE='regional' +TILE_RGNL='7' +NH0='0' +NH3='3' +NH4='4' +valid_vals_BOOLEAN=( \ +"TRUE" \ +"true" \ +"YES" \ +"yes" \ +"FALSE" \ +"false" \ +"NO" \ +"no" \ +) + +# [fixed_files] +FV3_NML_VARNAME_TO_SFC_CLIMO_FIELD_MAPPING=( \ +"FNALBC | snowfree_albedo" \ +"FNALBC2 | facsf" \ +"FNTG3C | substrate_temperature" \ +"FNVEGC | vegetation_greenness" \ +"FNVETC | vegetation_type" \ +"FNSOTC | soil_type" \ +"FNVMNC | vegetation_greenness" \ +"FNVMXC | vegetation_greenness" \ +"FNSLPC | slope_type" \ +"FNABSC | maximum_snow_albedo" \ +) +SFC_CLIMO_FIELDS=( \ +"facsf" \ +"maximum_snow_albedo" \ +"slope_type" \ +"snowfree_albedo" \ +"soil_type" \ +"substrate_temperature" \ +"vegetation_greenness" \ +"vegetation_type" \ +) +FNGLAC='global_glacier.2x2.grb' +FNMXIC='global_maxice.2x2.grb' +FNTSFC='RTGSST.1982.2012.monthly.clim.grb' +FNSNOC='global_snoclim.1.875.grb' +FNZORC='igbp' +FNAISC='CFSR.SEAICE.1982.2012.monthly.clim.grb' +FNSMCC='global_soilmgldas.t126.384.190.grb' +FNMSKH='seaice_newland.grb' +FIXgsm_FILES_TO_COPY_TO_FIXam=( \ +"global_glacier.2x2.grb" \ +"global_maxice.2x2.grb" \ +"RTGSST.1982.2012.monthly.clim.grb" \ +"global_snoclim.1.875.grb" \ +"CFSR.SEAICE.1982.2012.monthly.clim.grb" \ +"global_soilmgldas.t126.384.190.grb" \ +"seaice_newland.grb" \ +"global_climaeropac_global.txt" \ +"fix_co2_proj/global_co2historicaldata_2010.txt" \ +"fix_co2_proj/global_co2historicaldata_2011.txt" \ +"fix_co2_proj/global_co2historicaldata_2012.txt" \ +"fix_co2_proj/global_co2historicaldata_2013.txt" \ +"fix_co2_proj/global_co2historicaldata_2014.txt" \ +"fix_co2_proj/global_co2historicaldata_2015.txt" \ +"fix_co2_proj/global_co2historicaldata_2016.txt" \ +"fix_co2_proj/global_co2historicaldata_2017.txt" \ +"fix_co2_proj/global_co2historicaldata_2018.txt" \ +"fix_co2_proj/global_co2historicaldata_2019.txt" \ +"fix_co2_proj/global_co2historicaldata_2020.txt" \ +"fix_co2_proj/global_co2historicaldata_2021.txt" \ +"global_co2historicaldata_glob.txt" \ +"co2monthlycyc.txt" \ +"global_h2o_pltc.f77" \ +"global_hyblev.l65.txt" \ +"global_zorclim.1x1.grb" \ +"global_sfc_emissivity_idx.txt" \ +"global_tg3clim.2.6x1.5.grb" \ +"global_solarconstant_noaa_an.txt" \ +"global_albedo4.1x1.grb" \ +"geo_em.d01.lat-lon.2.5m.HGT_M.nc" \ +"HGT.Beljaars_filtered.lat-lon.30s_res.nc" \ +"ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77" \ +) +FV3_NML_VARNAME_TO_FIXam_FILES_MAPPING=( \ +"FNGLAC | global_glacier.2x2.grb" \ +"FNMXIC | global_maxice.2x2.grb" \ +"FNTSFC | RTGSST.1982.2012.monthly.clim.grb" \ +"FNSNOC | global_snoclim.1.875.grb" \ +"FNAISC | CFSR.SEAICE.1982.2012.monthly.clim.grb" \ +"FNSMCC | global_soilmgldas.t126.384.190.grb" \ +"FNMSKH | seaice_newland.grb" \ +) +CYCLEDIR_LINKS_TO_FIXam_FILES_MAPPING=( \ +"aerosol.dat | global_climaeropac_global.txt" \ +"co2historicaldata_2010.txt | fix_co2_proj/global_co2historicaldata_2010.txt" \ +"co2historicaldata_2011.txt | fix_co2_proj/global_co2historicaldata_2011.txt" \ +"co2historicaldata_2012.txt | fix_co2_proj/global_co2historicaldata_2012.txt" \ +"co2historicaldata_2013.txt | fix_co2_proj/global_co2historicaldata_2013.txt" \ +"co2historicaldata_2014.txt | fix_co2_proj/global_co2historicaldata_2014.txt" \ +"co2historicaldata_2015.txt | fix_co2_proj/global_co2historicaldata_2015.txt" \ +"co2historicaldata_2016.txt | fix_co2_proj/global_co2historicaldata_2016.txt" \ +"co2historicaldata_2017.txt | fix_co2_proj/global_co2historicaldata_2017.txt" \ +"co2historicaldata_2018.txt | fix_co2_proj/global_co2historicaldata_2018.txt" \ +"co2historicaldata_2019.txt | fix_co2_proj/global_co2historicaldata_2019.txt" \ +"co2historicaldata_2020.txt | fix_co2_proj/global_co2historicaldata_2020.txt" \ +"co2historicaldata_2021.txt | fix_co2_proj/global_co2historicaldata_2021.txt" \ +"co2historicaldata_glob.txt | global_co2historicaldata_glob.txt" \ +"co2monthlycyc.txt | co2monthlycyc.txt" \ +"global_h2oprdlos.f77 | global_h2o_pltc.f77" \ +"global_albedo4.1x1.grb | global_albedo4.1x1.grb" \ +"global_zorclim.1x1.grb | global_zorclim.1x1.grb" \ +"global_tg3clim.2.6x1.5.grb | global_tg3clim.2.6x1.5.grb" \ +"sfc_emissivity_idx.txt | global_sfc_emissivity_idx.txt" \ +"solarconstant_noaa_an.txt | global_solarconstant_noaa_an.txt" \ +"global_o3prdlos.f77 | ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77" \ +) + +# [grid_params] +LON_CTR='-118.0' +LAT_CTR='50.0' +NX='800' +NY='544' +PAZI='0.0' +NHW='6' +STRETCH_FAC='0.999' +DEL_ANGLE_X_SG='0.05845406938018506' +DEL_ANGLE_Y_SG='0.05845406938018506' +NEG_NX_OF_DOM_WITH_WIDE_HALO='-812' +NEG_NY_OF_DOM_WITH_WIDE_HALO='-556' + diff --git a/scripts/exaqm_manager.sh b/scripts/exaqm_manager.sh new file mode 100755 index 0000000000..889f931e04 --- /dev/null +++ b/scripts/exaqm_manager.sh @@ -0,0 +1,69 @@ +#! /bin/bash +set -x + +ecflow_sid=emc_aqm + +############################################## +# Set variables used in the script +############################################## +CDATE=${PDY}${cyc} +GDATE=$($NDATE -06 $CDATE) +gPDY=$(echo $GDATE | cut -c1-8) +gcyc=$(echo $GDATE | cut -c9-10) +NEXTDATE=$($NDATE +06 $CDATE) +NEXTPDY=$(echo $NEXTDATE | cut -c1-8) +NEXTcyc=$(echo $NEXTDATE | cut -c9-10) +# NEXT24HPDY=$($NDATE +24 ${PDY}00) +CURRENTDAYPDY=$(ecflow_client --query variable /${ecflow_sid}/primary/${gcyc}:PDY)00 +NEXTDAYPDY_CDATE=$($NDATE +24 $CURRENTDAYPDY) +NEXTDAYPDY=$(echo $NEXTDAYPDY_CDATE | cut -c1-8) + +#aqm_forecast_RESTART_file=$(ls ${DATAROOT}/aqm_forecast_${cyc}.${PDY}${cyc}/RESTART/*coupler.res|wc -l) +#aqm_forecast_RESTART_file="${DATAROOT}/aqm_forecast_${cyc}.${PDY}${cyc}/RESTART/*coupler.res" +gefs_check=$(compath.py ${envir}/gefs/${gefs_ver})/gefs.${NEXTPDY}/${NEXTcyc}/chem/sfcsig/geaer.t${NEXTcyc}z.atmf078.nemsio +gfs_check=$(compath.py ${envir}/gfs/${gfs_ver})/gfs.${NEXTPDY}/${NEXTcyc}/atmos/gfs.t${NEXTcyc}z.sfcf078.nc +found_required_file_for_next_cycle=NO +fcst_job_completed=NO +release_next_cycle=NO +previous_cycle_run_completed=NO +cleanup_job_done=NO +previous_cycle_aqm_manager_complete=NO + +h_try=1 +while [ $h_try -lt 70 ]; do + #################################### + # Set release_next_cycle event when + # current cycle fcst restart file exist + #################################### + if [ ${found_required_file_for_next_cycle} = "NO" ]; then + aqm_forecast_RESTART_file=$(ls ${DATAROOT}/aqm_forecast_${cyc}.${PDY}${cyc}/RESTART/*coupler.res|wc -l) + if [[ ${aqm_forecast_RESTART_file} -ge 1 && -f ${gefs_check} && -f ${gfs_check} ]]; then + ecflow_client --event release_next_cycle + found_required_file_for_next_cycle=YES + fi + fi + #################################### + # Requeue previous cycle when + # current forecast job is completed + #################################### + if [ ${fcst_job_completed} = "NO" ]; then + P_state=$(ecflow_client --query state /${ecflow_sid}/primary/${gcyc}) + e_state=$(ecflow_client --query state /${ecflow_sid}/primary/${cyc}/aqm/v1.0/forecast/jforecast) + if [[ ${e_state} = "complete" && ${P_state} = "complete" ]]; then + ecflow_client --event requeue_cycle + ecflow_client --alter change variable PDY $NEXTDAYPDY /${ecflow_sid}/primary/${gcyc} + ecflow_client --requeue force /${ecflow_sid}/primary/${gcyc}/aqm + fcst_job_completed=YES + fi + fi + + h_try=$((h_try+1)) + if [ ${found_required_file_for_next_cycle} = "YES" -a ${fcst_job_completed} = "YES" ]; then + h_try=99 + else + sleep 300 + fi +done +if [ $h_try -eq 70 ]; then + exit 70 +fi diff --git a/scripts/exdata_cleanup.sh b/scripts/exdata_cleanup.sh new file mode 100755 index 0000000000..201e80975b --- /dev/null +++ b/scripts/exdata_cleanup.sh @@ -0,0 +1,52 @@ +#! /bin/bash +set -x + +############################################## +# Clean up the DATA directory from previous cycle if found +############################################## +[[ $KEEPDATA = "YES" ]] && exit 0 + +############################################## +# Set variables used in the script +############################################## +CDATE=${PDY}${cyc} +GDATE=$($NDATE -24 $CDATE) +gPDY=$(echo $GDATE | cut -c1-8) +gcyc=$(echo $GDATE | cut -c9-10) + +############################################## +# Looking for the following directory for cleanup +# aqm_forecast_${gcyc}.${gPDY}${gcyc} +# aqm_get_extrn_ics_${gcyc}.${gPDY}${gcyc} +# aqm_get_extrn_lbcs_${gcyc}.${gPDY}${gcyc} +# aqm_nexus_gfs_sfc_${gcyc}.${gPDY}${gcyc} +# aqm_get_extrn_ics_${gcyc}.${gPDY}${gcyc} +# aqm_get_extrn_lbcs_${gcyc}.${gPDY}${gcyc} +############################################## +target_for_delete=${DATAROOT}/aqm_forecast_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +target_for_delete=${DATAROOT}/aqm_get_extrn_ics_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +target_for_delete=${DATAROOT}/aqm_get_extrn_lbcs_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +target_for_delete=${DATAROOT}/aqm_nexus_gfs_sfc_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +target_for_delete=${DATAROOT}/aqm_get_extrn_ics_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +target_for_delete=${DATAROOT}/aqm_get_extrn_lbcs_${gcyc}.${gPDY}${gcyc} +echo "Remove DATA from ${target_for_delete}" +[[ -d $target_for_delete ]] && rm -rf $target_for_delete + +exit 0 +##################################################### + diff --git a/scripts/exregional_aqm_lbcs.sh b/scripts/exregional_aqm_lbcs.sh index 1c887f5c55..9a153fef8b 100755 --- a/scripts/exregional_aqm_lbcs.sh +++ b/scripts/exregional_aqm_lbcs.sh @@ -84,11 +84,21 @@ yyyymmdd=${CDATE_MOD:0:8} mm="${CDATE_MOD:4:2}" hh="${CDATE_MOD:8:2}" -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + LBC_SPEC_FCST_HRS=() for i_lbc in $(seq ${LBC_SPEC_INTVL_HRS} ${LBC_SPEC_INTVL_HRS} ${FCST_LEN_HRS} ); do LBC_SPEC_FCST_HRS+=("$i_lbc") @@ -157,7 +167,7 @@ if [ ${DO_AQM_GEFS_LBCS} = "TRUE" ]; then if [ "${DO_REAL_TIME}" = "TRUE" ]; then AQM_MOFILE_FP="${COMINgefs}/gefs.${yyyymmdd}/${AQM_GEFS_FILE_CYC}/chem/sfcsig/${AQM_MOFILE_FN}" else - AQM_MOFILE_FP="${DCOMINgefs}/${yyyymmdd}/${AQM_GEFS_FILE_CYC}/${AQM_MOFILE_FN}" + AQM_MOFILE_FP="${COMINgefs}/${yyyymmdd}/${AQM_GEFS_FILE_CYC}/${AQM_MOFILE_FN}" fi # Check if GEFS aerosol files exist diff --git a/scripts/exregional_bias_correction_o3.sh b/scripts/exregional_bias_correction_o3.sh index 651d5bb420..5b4e4d6f70 100755 --- a/scripts/exregional_bias_correction_o3.sh +++ b/scripts/exregional_bias_correction_o3.sh @@ -93,11 +93,20 @@ if [ "${PREDEF_GRID_NAME}" = "AQM_NA_13km" ]; then id_domain=793 fi -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac #----------------------------------------------------------------------------- # STEP 1: Retrieve AIRNOW observation data @@ -108,10 +117,11 @@ mkdir -p "${DATA}/data" if [ -d "${DATA}/data/bcdata.${yyyymm}" ]; then rm -rf "${DATA}/data/bcdata.${yyyymm}" mkdir -p "${DATA}/data/bcdata.${yyyymm}" - cp -rL "${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/airnow" "${DATA}/data/bcdata.${yyyymm}" - cp -rL "${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated" "${DATA}/data/bcdata.${yyyymm}" + cp -rL "${COMINbicor}/bcdata.${yyyymm}/airnow" "${DATA}/data/bcdata.${yyyymm}" + cp -rL "${COMINbicor}/bcdata.${yyyymm}/interpolated" "${DATA}/data/bcdata.${yyyymm}" fi +cd ${DATA} # Retrieve real-time airnow data for the last three days and convert them into netcdf if [ "${DO_REAL_TIME}" = "TRUE" ]; then for ipdym in {1..3}; do @@ -214,31 +224,31 @@ POST_STEP cp ${DATA}/out/ozone/${yyyy}/*nc ${DATA}/data/bcdata.${yyyymm}/interpolated/ozone/${yyyy} -if [ "${DO_AQM_SAVE_AIRNOW_HIST}" = "TRUE" ]; then - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated/ozone/${yyyy} - cp ${DATA}/out/ozone/${yyyy}/*nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated/ozone/${yyyy} +#if [ "${DO_AQM_SAVE_AIRNOW_HIST}" = "TRUE" ]; then + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm}/interpolated/ozone/${yyyy} + cp ${DATA}/out/ozone/${yyyy}/*nc ${COMOUTbicor}/bcdata.${yyyymm}/interpolated/ozone/${yyyy} # CSV files - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/airnow/csv/${yyyy}/${PDY} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m1}/airnow/csv/${yyyy_m1}/${PDYm1} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m2}/airnow/csv/${yyyy_m2}/${PDYm2} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m3}/airnow/csv/${yyyy_m3}/${PDYm3} - cp ${DCOMINairnow}/${PDYm1}/airnow/HourlyAQObs_${PDYm1}*.dat ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m1}/airnow/csv/${yyyy_m1}/${PDYm1} - cp ${DCOMINairnow}/${PDYm2}/airnow/HourlyAQObs_${PDYm2}*.dat ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m2}/airnow/csv/${yyyy_m2}/${PDYm2} - cp ${DCOMINairnow}/${PDYm3}/airnow/HourlyAQObs_${PDYm3}*.dat ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m3}/airnow/csv/${yyyy_m3}/${PDYm3} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm}/airnow/csv/${yyyy}/${PDY} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m1}/airnow/csv/${yyyy_m1}/${PDYm1} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m2}/airnow/csv/${yyyy_m2}/${PDYm2} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m3}/airnow/csv/${yyyy_m3}/${PDYm3} + cp ${DCOMINairnow}/${PDYm1}/airnow/HourlyAQObs_${PDYm1}*.dat ${COMOUTbicor}/bcdata.${yyyymm_m1}/airnow/csv/${yyyy_m1}/${PDYm1} + cp ${DCOMINairnow}/${PDYm2}/airnow/HourlyAQObs_${PDYm2}*.dat ${COMOUTbicor}/bcdata.${yyyymm_m2}/airnow/csv/${yyyy_m2}/${PDYm2} + cp ${DCOMINairnow}/${PDYm3}/airnow/HourlyAQObs_${PDYm3}*.dat ${COMOUTbicor}/bcdata.${yyyymm_m3}/airnow/csv/${yyyy_m3}/${PDYm3} # NetCDF files - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/airnow/netcdf/${yyyy}/${PDY} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2} - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3} - cp ${DATA}/data/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1}/HourlyAQObs.${PDYm1}.nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1} - cp ${DATA}/data/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2}/HourlyAQObs.${PDYm2}.nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2} - cp ${DATA}/data/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3}/HourlyAQObs.${PDYm3}.nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3} - - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/grid/${cyc}z/${PDY} - cp ${COMIN}/${NET}.${cycle}.*sfc*.nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/grid/${cyc}z/${PDY} -fi + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm}/airnow/netcdf/${yyyy}/${PDY} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2} + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3} + cp ${DATA}/data/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1}/HourlyAQObs.${PDYm1}.nc ${COMOUTbicor}/bcdata.${yyyymm_m1}/airnow/netcdf/${yyyy_m1}/${PDYm1} + cp ${DATA}/data/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2}/HourlyAQObs.${PDYm2}.nc ${COMOUTbicor}/bcdata.${yyyymm_m2}/airnow/netcdf/${yyyy_m2}/${PDYm2} + cp ${DATA}/data/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3}/HourlyAQObs.${PDYm3}.nc ${COMOUTbicor}/bcdata.${yyyymm_m3}/airnow/netcdf/${yyyy_m3}/${PDYm3} + + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm}/grid/${cyc}z/${PDY} + cp ${COMIN}/${NET}.${cycle}.*sfc*.nc ${COMOUTbicor}/bcdata.${yyyymm}/grid/${cyc}z/${PDY} +#fi #----------------------------------------------------------------------------- # STEP 4: Performing Bias Correction for Ozone @@ -246,7 +256,7 @@ fi rm -rf ${DATA}/data/bcdata* -ln -sf ${AQM_AIRNOW_HIST_DIR}/bcdata* "${DATA}/data" +ln -sf ${COMINbicor}/bcdata* "${DATA}/data" mkdir -p ${DATA}/data/sites cp ${PARMaqm_utils}/bias_correction/config.ozone.bias_corr_${id_domain}.${cyc}z ${DATA} diff --git a/scripts/exregional_bias_correction_pm25.sh b/scripts/exregional_bias_correction_pm25.sh index 65f14660ab..3cfb35cf19 100755 --- a/scripts/exregional_bias_correction_pm25.sh +++ b/scripts/exregional_bias_correction_pm25.sh @@ -93,11 +93,20 @@ if [ "${PREDEF_GRID_NAME}" = "AQM_NA_13km" ]; then id_domain=793 fi -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac #----------------------------------------------------------------------------- # STEP 1: Retrieve AIRNOW observation data @@ -111,9 +120,9 @@ if [ -d "${DATA}/data/bcdata.${yyyymm}" ]; then cp -rL "${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/airnow" "${DATA}/data/bcdata.${yyyymm}" cp -rL "${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated" "${DATA}/data/bcdata.${yyyymm}" fi - +cd ${DATA} # Retrieve real-time airnow data for the last three days -if [ "${DO_REAL_TIME}" = "TRUE" ]; then +#if [ "${DO_REAL_TIME}" = "TRUE" ]; then for ipdym in {1..3}; do case $ipdym in 1) @@ -156,7 +165,7 @@ if [ "${DO_REAL_TIME}" = "TRUE" ]; then fi POST_STEP done -fi +#fi #----------------------------------------------------------------------------- # STEP 2: Extracting PM2.5, O3, and met variables from CMAQ input and outputs @@ -214,10 +223,10 @@ POST_STEP cp ${DATA}/out/pm25/${yyyy}/*nc ${DATA}/data/bcdata.${yyyymm}/interpolated/pm25/${yyyy} -if [ "${DO_AQM_SAVE_AIRNOW_HIST}" = "TRUE" ]; then - mkdir -p ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated/pm25/${yyyy} - cp ${DATA}/out/pm25/${yyyy}/*nc ${AQM_AIRNOW_HIST_DIR}/bcdata.${yyyymm}/interpolated/pm25/${yyyy} -fi +#if [ "${DO_AQM_SAVE_AIRNOW_HIST}" = "TRUE" ]; then + mkdir -p ${COMOUTbicor}/bcdata.${yyyymm}/interpolated/pm25/${yyyy} + cp ${DATA}/out/pm25/${yyyy}/*nc ${COMOUTbicor}/bcdata.${yyyymm}/interpolated/pm25/${yyyy} +#fi #----------------------------------------------------------------------- # STEP 4: Performing Bias Correction for PM2.5 @@ -225,7 +234,7 @@ fi rm -rf ${DATA}/data/bcdata* -ln -sf ${AQM_AIRNOW_HIST_DIR}/bcdata* "${DATA}/data" +ln -sf ${COMINbicor}/bcdata* "${DATA}/data" mkdir -p ${DATA}/data/sites diff --git a/scripts/exregional_get_extrn_mdl_files.sh b/scripts/exregional_get_extrn_mdl_files.sh index d0a51fca3a..4614637167 100755 --- a/scripts/exregional_get_extrn_mdl_files.sh +++ b/scripts/exregional_get_extrn_mdl_files.sh @@ -70,11 +70,20 @@ if [ "${ICS_OR_LBCS}" = "ICS" ]; then elif [ "${ICS_OR_LBCS}" = "LBCS" ]; then file_set="fcst" first_time=$((TIME_OFFSET_HRS + LBC_SPEC_INTVL_HRS)) - if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} - fi + case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; + esac last_time=$((TIME_OFFSET_HRS + FCST_LEN_HRS)) fcst_hrs="${first_time} ${last_time} ${LBC_SPEC_INTVL_HRS}" file_names=${EXTRN_MDL_FILES_LBCS[@]} diff --git a/scripts/exregional_make_ics.sh b/scripts/exregional_make_ics.sh index f81a528fd7..730f549fa3 100755 --- a/scripts/exregional_make_ics.sh +++ b/scripts/exregional_make_ics.sh @@ -85,7 +85,7 @@ fi #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - extrn_mdl_staging_dir="${DATAROOT}/get_extrn_ics.${share_pid}" + extrn_mdl_staging_dir="${DATAROOT}/aqm_get_extrn_ics_${cyc}.${share_pid}" extrn_mdl_var_defns_fp="${extrn_mdl_staging_dir}/${NET}.${cycle}.${EXTRN_MDL_NAME_ICS}.ICS.${EXTRN_MDL_VAR_DEFNS_FN}.sh" else extrn_mdl_staging_dir="${COMIN}/${EXTRN_MDL_NAME_ICS}/for_ICS${SLASH_ENSMEM_SUBDIR}" diff --git a/scripts/exregional_make_lbcs.sh b/scripts/exregional_make_lbcs.sh index bf7d5a75fc..e9231158c0 100755 --- a/scripts/exregional_make_lbcs.sh +++ b/scripts/exregional_make_lbcs.sh @@ -84,7 +84,7 @@ fi #----------------------------------------------------------------------- # if [ $RUN_ENVIR = "nco" ]; then - extrn_mdl_staging_dir="${DATAROOT}/get_extrn_lbcs.${share_pid}" + extrn_mdl_staging_dir="${DATAROOT}/aqm_get_extrn_lbcs_${cyc}.${share_pid}" extrn_mdl_var_defns_fp="${extrn_mdl_staging_dir}/${NET}.${cycle}.${EXTRN_MDL_NAME_LBCS}.LBCS.${EXTRN_MDL_VAR_DEFNS_FN}.sh" else extrn_mdl_staging_dir="${COMIN}/${EXTRN_MDL_NAME_LBCS}/for_LBCS${SLASH_ENSMEM_SUBDIR}" @@ -98,11 +98,21 @@ fi # #----------------------------------------------------------------------- # -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + LBC_SPEC_FCST_HRS=() for i_lbc in $(seq ${LBC_SPEC_INTVL_HRS} ${LBC_SPEC_INTVL_HRS} $(( FCST_LEN_HRS+LBC_SPEC_INTVL_HRS )) ); do LBC_SPEC_FCST_HRS+=("$i_lbc") diff --git a/scripts/exregional_nexus_emission.sh b/scripts/exregional_nexus_emission.sh index a41f11d156..134bd9cb92 100755 --- a/scripts/exregional_nexus_emission.sh +++ b/scripts/exregional_nexus_emission.sh @@ -89,7 +89,7 @@ mkdir -p "$DATAinput" USE_GFS_SFC="FALSE" if [ "${RUN_ENVIR}" = "nco" ]; then - GFS_SFC_INPUT="${DATAROOT}/nexus_gfs_sfc.${share_pid}" + GFS_SFC_INPUT=${GFS_SFC_INPUT:-${DATAROOT}/aqm_nexus_gfs_sfc_${cyc}.${share_pid}} else GFS_SFC_INPUT="${COMIN}/GFS_SFC" fi @@ -130,11 +130,21 @@ hh="${cyc}" yyyymmdd="${PDY}" NUM_SPLIT_NEXUS=$( printf "%02d" ${NUM_SPLIT_NEXUS} ) -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi + +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac if [ "${NUM_SPLIT_NEXUS}" = "01" ]; then start_date=$( $DATE_UTIL --utc --date "${yyyymmdd} ${hh} UTC" "+%Y%m%d%H" ) diff --git a/scripts/exregional_nexus_gfs_sfc.sh b/scripts/exregional_nexus_gfs_sfc.sh index 3f15c2ce4c..c857e47288 100755 --- a/scripts/exregional_nexus_gfs_sfc.sh +++ b/scripts/exregional_nexus_gfs_sfc.sh @@ -56,11 +56,22 @@ yyyymmdd=${GFS_SFC_CDATE:0:8} yyyymm=${GFS_SFC_CDATE:0:6} yyyy=${GFS_SFC_CDATE:0:4} hh=${GFS_SFC_CDATE:8:2} -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi + +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + fcst_len_hrs_offset=$(( FCST_LEN_HRS + TIME_OFFSET_HRS )) # #----------------------------------------------------------------------- diff --git a/scripts/exregional_nexus_post_split.sh b/scripts/exregional_nexus_post_split.sh index f1830092ce..b6748adeae 100755 --- a/scripts/exregional_nexus_post_split.sh +++ b/scripts/exregional_nexus_post_split.sh @@ -59,11 +59,22 @@ hh="${cyc}" yyyymmdd="${PDY}" NUM_SPLIT_NEXUS=$( printf "%02d" ${NUM_SPLIT_NEXUS} ) -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi + +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + start_date=$( $DATE_UTIL --utc --date "${yyyymmdd} ${hh} UTC" "+%Y%m%d%H" ) end_date=$( $DATE_UTIL --utc --date "${yyyymmdd} ${hh} UTC + ${FCST_LEN_HRS} hours" "+%Y%m%d%H" ) diff --git a/scripts/exregional_point_source.sh b/scripts/exregional_point_source.sh index 4afba98658..bff915eaa9 100755 --- a/scripts/exregional_point_source.sh +++ b/scripts/exregional_point_source.sh @@ -53,11 +53,21 @@ This is the ex-script for the task that runs PT_SOURCE. # eval ${PRE_TASK_CMDS} -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + nstep=$(( FCST_LEN_HRS+1 )) yyyymmddhh="${PDY}${cyc}" diff --git a/scripts/exregional_post_stat_o3.sh b/scripts/exregional_post_stat_o3.sh index 69b1879634..f97e6bcd92 100755 --- a/scripts/exregional_post_stat_o3.sh +++ b/scripts/exregional_post_stat_o3.sh @@ -109,11 +109,20 @@ else fi POST_STEP -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac fhr=01 while [ ${fhr} -le ${FCST_LEN_HRS} ]; do diff --git a/scripts/exregional_pre_post_stat.sh b/scripts/exregional_pre_post_stat.sh index dce755c1bc..02312163bb 100755 --- a/scripts/exregional_pre_post_stat.sh +++ b/scripts/exregional_pre_post_stat.sh @@ -53,10 +53,22 @@ This is the ex-script for the task that runs POST-UPP-STAT. # eval ${PRE_TASK_CMDS} -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} +if [ "${FCST_LEN_HRS}" = "-1" ]; then + case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; + esac + if [ "${RUN_TASK_RUN_POST}" = "TRUE" ]; then rm -f "${COMIN}/${TN_RUN_POST}_${PDY}${cyc}_task_complete.txt" fi diff --git a/scripts/exregional_run_fcst.sh b/scripts/exregional_run_fcst.sh index 481e5e6505..f6535803d0 100755 --- a/scripts/exregional_run_fcst.sh +++ b/scripts/exregional_run_fcst.sh @@ -81,11 +81,21 @@ else All executables will be submitted with command \'${RUN_CMD_FCST}\'." fi -if [ ${#FCST_LEN_CYCL[@]} -gt 1 ]; then - cyc_mod=$(( ${cyc} - ${DATE_FIRST_CYCL:8:2} )) - CYCLE_IDX=$(( ${cyc_mod} / ${INCR_CYCL_FREQ} )) - FCST_LEN_HRS=${FCST_LEN_CYCL[$CYCLE_IDX]} -fi +case $cyc in + 00 ) + FCST_LEN_HRS=6 + ;; + 06 ) + FCST_LEN_HRS=72 + ;; + 12 ) + FCST_LEN_HRS=72 + ;; + 18 ) + FCST_LEN_HRS=6 + ;; +esac + # #----------------------------------------------------------------------- # diff --git a/scripts/exregional_run_post.sh b/scripts/exregional_run_post.sh index 5cbcb6aa0b..839827839b 100755 --- a/scripts/exregional_run_post.sh +++ b/scripts/exregional_run_post.sh @@ -167,7 +167,7 @@ fi # Set the names of the forecast model's write-component output files. # if [ "${RUN_ENVIR}" = "nco" ]; then - DATAFCST=$DATAROOT/run_fcst${dot_ensmem/./_}.${share_pid} + DATAFCST=${DATAFCST:-${DATAROOT}/run_fcst${dot_ensmem/./_}.${share_pid}} else DATAFCST="${COMIN}${SLASH_ENSMEM_SUBDIR}" fi @@ -304,9 +304,9 @@ done rm -rf ${DATA_FHR} # Delete the forecast directory -if [ $RUN_ENVIR = "nco" ] && [ $KEEPDATA = "FALSE" ]; then - rm -rf $DATAFCST -fi +# if [ $RUN_ENVIR = "nco" ] && [ $KEEPDATA = "FALSE" ]; then +# rm -rf $DATAFCST +# fi # #----------------------------------------------------------------------- # diff --git a/ush/config.aqm.nco.realtime.yaml b/ush/config.aqm.nco.realtime.yaml index 3609bdc246..754d3ce7c9 100644 --- a/ush/config.aqm.nco.realtime.yaml +++ b/ush/config.aqm.nco.realtime.yaml @@ -34,7 +34,7 @@ nco: model_ver: v7.0 RUN: aqm_nco_aqmna13km OPSROOT: /path/to/custom/opsroot - KEEPDATA: false + KEEPDATA: NO workflow_switches: RUN_TASK_MAKE_GRID: false RUN_TASK_MAKE_OROG: false diff --git a/ush/config_defaults.yaml b/ush/config_defaults.yaml index 7a4ee1fd31..837cd51668 100644 --- a/ush/config_defaults.yaml +++ b/ush/config_defaults.yaml @@ -963,7 +963,7 @@ nco: SENDDBN_NTC: false SENDCOM: false SENDWEB: false - KEEPDATA: true + KEEPDATA: YES MAILTO: "" MAILCC: "" @@ -2961,7 +2961,7 @@ cpl_aqm_parm: # AQM_LBCS_FILES: # File name of chemical LBCs # - # DCOMINgefs: + # COMINgefs: # Path to the directory containing GEFS aerosol LBC files # # AQM_GEFS_FILE_PREFIX: @@ -3038,7 +3038,7 @@ cpl_aqm_parm: DCOMINchem_lbcs: "" AQM_LBCS_FILES: "am4_bndy_c793.2019.v1.nc" - DCOMINgefs: "" + COMINgefs: "" AQM_GEFS_FILE_PREFIX: "geaer" AQM_GEFS_FILE_CYC: "" @@ -3052,4 +3052,6 @@ cpl_aqm_parm: DCOMINpt_src: "/path/to/point/source/base/directory" DCOMINairnow: "/path/to/airnow/obaservation/data" - AQM_AIRNOW_HIST_DIR: "/path/to/historical/airnow/data/dir" + #AQM_AIRNOW_HIST_DIR: "/path/to/historical/airnow/data/dir" + COMINbicor: "/path/to/historical/airnow/data/dir" + COMOUTbicor: "/path/to/historical/airnow/data/dir" diff --git a/ush/job_preamble.sh b/ush/job_preamble.sh index adb3f0b503..b2d82cdc7f 100644 --- a/ush/job_preamble.sh +++ b/ush/job_preamble.sh @@ -7,7 +7,7 @@ # #----------------------------------------------------------------------- # -export share_pid=${WORKFLOW_ID}_${PDY}${cyc} +export share_pid=${share_pid:-${PDY}${cyc}} if [ $# -ne 0 ]; then export pid=$share_pid export jobid=${job}.${pid} @@ -121,8 +121,8 @@ export -f POST_STEP # #----------------------------------------------------------------------- # +[[ "$WORKFLOW_MANAGER" = "rocoto" ]] && export COMROOT=$COMROOT if [ "${RUN_ENVIR}" = "nco" ]; then - export COMROOT=$COMROOT export COMIN="${COMIN:-$(compath.py -o ${NET}/${model_ver}/${RUN}.${PDY}/${cyc})}" export COMOUT="${COMOUT:-$(compath.py -o ${NET}/${model_ver}/${RUN}.${PDY}/${cyc})}" export COMINm1="${COMINm1:-$(compath.py -o ${NET}/${model_ver}/${RUN}.${PDYm1})}" @@ -130,7 +130,7 @@ if [ "${RUN_ENVIR}" = "nco" ]; then export COMINgfs="${COMINgfs:-$(compath.py ${envir}/gfs/${gfs_ver})}" export COMINgefs="${COMINgefs:-$(compath.py ${envir}/gefs/${gefs_ver})}" - export KEEPDATA="${KEEPDATA:-$KEEPDATA}" +# export KEEPDATA="${KEEPDATA:-$KEEPDATA}" else export COMIN="${COMIN_BASEDIR}/${PDY}${cyc}" export COMOUT="${COMOUT_BASEDIR}/${PDY}${cyc}" @@ -161,19 +161,11 @@ fi #----------------------------------------------------------------------- # function job_postamble() { - # Remove temp directory - if [ "${RUN_ENVIR}" = "nco" ] && [ "${KEEPDATA}" = "FALSE" ]; then + if [ "${RUN_ENVIR}" = "nco" ] && [ "${KEEPDATA}" = "NO" ]; then + echo "DATA clean up for directory: ${DATA}" cd ${DATAROOT} - # Remove current data directory - if [ $# -eq 0 ]; then - rm -rf $DATA - # Remove all current and shared data directories - elif [ "$1" = "TRUE" ]; then - rm -rf $DATA - share_pid="${WORKFLOW_ID}_${PDY}${cyc}" - rm -rf *${share_pid} - fi + rm -rf $DATA fi # Print exit message diff --git a/ush/machine/wcoss2.yaml b/ush/machine/wcoss2.yaml index e104363a1e..552173ceef 100644 --- a/ush/machine/wcoss2.yaml +++ b/ush/machine/wcoss2.yaml @@ -9,9 +9,9 @@ platform: MET_BIN_EXEC: bin MET_INSTALL_DIR: /apps/ops/para/libs/intel/19.1.3.304/met/10.1.1 DOMAIN_PREGEN_BASEDIR: /lfs/h2/emc/lam/noscrub/UFS_SRW_App/develop/FV3LAM_pregen - QUEUE_DEFAULT: dev - QUEUE_FCST: dev - QUEUE_HPSS: dev_transfer + QUEUE_DEFAULT: devhigh + QUEUE_FCST: devhigh + QUEUE_HPSS: devhigh RUN_CMD_FCST: mpiexec -n ${PE_MEMBER01} -ppn ${PPN_RUN_FCST} --cpu-bind core -depth ${OMP_NUM_THREADS_RUN_FCST} RUN_CMD_POST: mpiexec -n ${nprocs} RUN_CMD_PRDGEN: mpiexec -n ${nprocs} --cpu-bind core cfp @@ -44,10 +44,13 @@ cpl_aqm_parm: DCOMINcanopy: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/canopy DCOMINfire: /lfs/h2/emc/physics/noscrub/kai.wang/RAVE_fire/RAVE_NA_NRT DCOMINchem_lbcs: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/LBCS/AQM_NA13km_AM4_v1 - DCOMINgefs: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GEFS_DATA + #DCOMINgefs: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GEFS_DATA + COMINgefs: /lfs/h1/ops/prod/com/gefs/v12.3 DCOMINpt_src: /lfs/h2/emc/physics/noscrub/Youhua.Tang/nei2016v1-pt/v2023-01-PT DCOMINairnow: /lfs/h1/ops/prod/dcom - AQM_AIRNOW_HIST_DIR: /lfs/h2/emc/physics/noscrub/jianping.huang/Bias_correction/aqmv7.0 + #AQM_AIRNOW_HIST_DIR: /lfs/h2/emc/physics/noscrub/jianping.huang/Bias_correction/aqmv7.0e + COMINbicor: /lfs/h2/emc/physics/noscrub/jianping.huang/Bias_correction/aqmv7.0g + COMOUTbicor: /lfs/h2/emc/physics/noscrub/jianping.huang/Bias_correction/aqmv7.0g NEXUS_INPUT_DIR: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/nexus_emissions NEXUS_FIX_DIR: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/nexus/fix NEXUS_GFS_SFC_DIR: /lfs/h2/emc/lam/noscrub/RRFS_CMAQ/GFS_DATA diff --git a/ush/preamble.sh b/ush/preamble.sh index 0572905d55..132aada491 100644 --- a/ush/preamble.sh +++ b/ush/preamble.sh @@ -87,8 +87,11 @@ fi #----------------------------------------------------------------------- # STRICT=${STRICT:-"TRUE"} -TRACE=${DEBUG:-"FALSE"} - +if [ "${RUN_ENVIR}" = "nco" ]; then + TRACE="TRUE" +else + TRACE=${DEBUG:-"FALSE"} +fi if [[ $STRICT == "TRUE" ]]; then # Exit on error and undefined variable set -euo pipefail diff --git a/versions/run.ver.wcoss2 b/versions/run.ver.wcoss2 index 32ec4dc78f..1827406023 100644 --- a/versions/run.ver.wcoss2 +++ b/versions/run.ver.wcoss2 @@ -1,5 +1,9 @@ #!/bin/bash +export aqm_ver=v7.0.75 +export gfs_ver=v16.3 +export gefs_ver=v12.3 + export PrgEnv_intel_ver=8.1.0 export intel_ver=19.1.3.304 export craype_ver=2.7.13 @@ -38,9 +42,6 @@ export python_ver=3.8.6 export rocoto_ver=1.3.5 export envvar_ver=1.0 -export gfs_ver=v16.3 -export gefs_ver=v12.3 - export udunits_ver=2.2.28 export gsl_ver=2.7 export nco_ver=4.9.7