From 283ee88ebe62c886412914e8659c49ce9157bca1 Mon Sep 17 00:00:00 2001 From: Matthys Potgieter Date: Thu, 23 Nov 2023 12:30:14 +0200 Subject: [PATCH] Update MQProteogenomics.md --- MQProteogenomics.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/MQProteogenomics.md b/MQProteogenomics.md index 40dee4e..4748bfb 100644 --- a/MQProteogenomics.md +++ b/MQProteogenomics.md @@ -29,8 +29,8 @@ singularity shell mqproteogenomics_v2.0.4.img Run the example: ~~~ cd cbio-proteogenomics-tests/lib/testdata/proteogenomics_sample -Singularity> sixframe.sh genomes/ genomes/config.yaml # create the six frame database used by the next step (genomes/sixframe/combined_prot.fasta) -mqproteogenomics.sh mq_proteogeomics_test.yml +sixframe.sh genomes/ genomes/config.yaml # create the six frame database used by the next step (genomes/sixframe/combined_prot.fasta) +mqproteogenomics.sh mq_proteogeomics_test.yml # analyze the data using the six frame translated database ~~~ Now adjust the config file for our own data.