From 44898c1331f81bd6943635ee5b10ee23d6077e90 Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:17 -0500 Subject: [PATCH 1/7] copying etlMapping.yaml to gen3.theanvil.io From 1235e6e3cad8ec733594569d2d4edfbde11516ed Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:18 -0500 Subject: [PATCH 2/7] copying manifest.json to gen3.theanvil.io --- gen3.theanvil.io/manifest.json | 52 +++++++++++++++++----------------- 1 file changed, 26 insertions(+), 26 deletions(-) diff --git a/gen3.theanvil.io/manifest.json b/gen3.theanvil.io/manifest.json index 60362ec32..56b94d0d3 100644 --- a/gen3.theanvil.io/manifest.json +++ b/gen3.theanvil.io/manifest.json @@ -7,29 +7,29 @@ "autodeploy": "yes" }, "versions": { - "access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2021.09", - "arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2021.09", - "audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2021.09", + "access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2021.10", + "arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2021.10", + "audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2021.10", "aws-es-proxy": "quay.io/cdis/aws-es-proxy:0.8", - "fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2021.09", + "fence": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/fence:2021.10", "fluentd": "fluent/fluentd-kubernetes-daemonset:v1.2-debian-cloudwatch", - "guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2021.09", - "hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2021.09", + "guppy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/guppy:2021.10", + "hatchery": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery:2021.10", "ambassador": "quay.io/datawire/ambassador:1.4.2", - "indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2021.09", - "manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2021.09", - "peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2021.09", - "pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2021.09", - "portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2021.09", - "revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2021.09", - "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2021.09", - "sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2021.09", - "spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2021.09", - "tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2021.09", - "ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2021.09", - "wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2021.09", - "dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2021.09", - "metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2021.09" + "indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2021.10", + "manifestservice": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifestservice:2021.10", + "peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2021.10", + "pidgin": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pidgin:2021.10", + "portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2021.10", + "revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2021.10", + "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2021.10", + "sower": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sower:2021.10", + "spark": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark:2021.10", + "tube": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube:2021.10", + "ssjdispatcher": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/ssjdispatcher:2021.10", + "wts": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/workspace-token-service:2021.10", + "dashboard": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics:2021.10", + "metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2021.10" }, "indexd": { "arborist": "true" @@ -38,7 +38,7 @@ "environment": "anvilprod", "hostname": "gen3.theanvil.io", "revproxy_arn": "arn:aws:acm:us-east-1:474789003679:certificate/9fd731e3-3366-4bd0-a3ef-0453dc07289a", - "dictionary_url": "https://s3.amazonaws.com/dictionary-artifacts/anvil/2.3.2/schema.json", + "dictionary_url": "https://s3.amazonaws.com/dictionary-artifacts/anvil/2.3.5/schema.json", "portal_app": "gitops", "kube_bucket": "kube-anvilprod-gen3", "logs_bucket": "logs-anvilprod-gen3", @@ -60,7 +60,7 @@ "action": "export", "container": { "name": "job-task", - "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2021.09", + "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2021.10", "pull_policy": "Always", "env": [ { @@ -128,7 +128,7 @@ "action": "export-files", "container": { "name": "job-task", - "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2021.09", + "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/pelican-export:2021.10", "pull_policy": "Always", "env": [ { @@ -194,7 +194,7 @@ "serviceAccountName": "jobs-gen3-theanvil-io", "container": { "name": "job-task", - "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-manifest-ingestion:2021.09", + "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-manifest-ingestion:2021.10", "pull_policy": "Always", "env": [ { @@ -234,7 +234,7 @@ "serviceAccountName": "jobs-gen3-theanvil-io", "container": { "name": "job-task", - "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/get-dbgap-metadata:2021.09", + "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/get-dbgap-metadata:2021.10", "pull_policy": "Always", "env": [], "volumeMounts": [ @@ -264,7 +264,7 @@ }, "ssjdispatcher": { "job_images": { - "indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2021.09" + "indexing": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexs3client:2021.10" } }, "arborist": { From b0244d5da42972d07b59e517e045171523cd4382 Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:18 -0500 Subject: [PATCH 3/7] copying manifests/hatchery/hatchery.json to gen3.theanvil.io --- gen3.theanvil.io/manifests/hatchery/hatchery.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gen3.theanvil.io/manifests/hatchery/hatchery.json b/gen3.theanvil.io/manifests/hatchery/hatchery.json index 8120211f5..12bb1cb02 100644 --- a/gen3.theanvil.io/manifests/hatchery/hatchery.json +++ b/gen3.theanvil.io/manifests/hatchery/hatchery.json @@ -5,7 +5,7 @@ "sidecar": { "cpu-limit": "1.0", "memory-limit": "512Mi", - "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2021.09", + "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3fuse-sidecar:2021.10", "env": { "NAMESPACE": "default", "HOSTNAME": "gen3.theanvil.io" From 97b371c699a8e37c9dc0b32d021fae36ba014aeb Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:19 -0500 Subject: [PATCH 4/7] copying portal/gitops-favicon.ico to gen3.theanvil.io From 896d1e622cb710a9b162842e356802752b6eebdf Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:19 -0500 Subject: [PATCH 5/7] copying portal/gitops-logo.png to gen3.theanvil.io From 22e034b92afaada638324830959809cf274b0b8c Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:20 -0500 Subject: [PATCH 6/7] copying portal/gitops.css to gen3.theanvil.io From a79d718d35f31de24da9fb8bcd3ffeaa2e45d909 Mon Sep 17 00:00:00 2001 From: PlanXCyborg <38964842+PlanXCyborg@users.noreply.github.com> Date: Fri, 29 Oct 2021 14:07:20 -0500 Subject: [PATCH 7/7] copying portal/gitops.json to gen3.theanvil.io