Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat

The importance of converting relative to absolute abundance in the context of microbial ecology: Introducing the user-friendly DspikeIn R package

Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.

Scripts for analysis of metatranscriptomic and 16S rRNA amplicon data from wild oysters in Narragansett Bay

Welcome to 'Metagenomics in R for Dummies'! Are you interested in learning the essentials of metagenomics in a short period of time? You've reached the right repos!

Code and raw data for *Galaxea fascicularis* microbiome data analysis

Microbial community dynamics during key life-history transitions in the chemosymbiotic mussel, Gigantidas childressi

This repository contains code for pre-processing and analysis of 16S rRNA data used to generate results in the paper "Skin bacterial community dynamics of hands and forearms before and after military field exercise".

16S rRNA sequencing data analysis of mice fed with pectin-based prebiotic fiber using both QIIME2 and R.

Scripts for combined 16S analysis and Rscripts to make figures for conclusions chapter of dissertation

agp data to understand gut microbiome and childhood obesity.

An analysis of cortisol levels and gut microbiome composition in primates (Gorilla) housed in U.S. zoos using the BugSeq-er pipeline.