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bioinformatics-data

Here are 14 public repositories matching this topic...

Bioinformatics_Algorithms

mhtjsh / Bioinformatics_Algorithms

I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python

bioinformatics bioinformatics-data bioinformatics-algorithms bioinformatics-tool

Updated Dec 28, 2024
Python

Protein-feature-extraction

jithin8mathew / Protein-feature-extraction

Python code to extract features from Protein sequences for Machine Learning/Deep Learning

windows linux machine-learning bioinformatics deep-learning bioinformatics-pipeline feature-extraction biopython protein-sequences fasta bioinformatics-data extract-features bioinformatics-analysis protein-feature-extraction

Updated Mar 26, 2022
Python

genouest / biomaj

BioMAJ

python open-source downloader bioinformatics bioinformatics-data

Updated Sep 13, 2024
Python

cancervariants / therapy-normalization

Services and guidelines for normalizing drug and other therapy terms

bioinformatics bioinformatics-data precision-medicine

Updated Jan 24, 2025
Python

FatemehGholamzadeh / BWT-on-Gene-Sequence

implementation of Burrows–Wheeler transform on a Gene Sequence - Bioinformatics Course - Fall 2019

python machine-learning bioinformatics machine-learning-algorithms python-script python3 machinelearning bwt bioinformatics-data bioinformatics-analysis bioinformatics-algorithms bwt-transform

Updated Sep 29, 2021
Python

biowdl / biowdl-test-data

Reproducible and reusable test data for bioinformatics projects.

bioinformatics reproducible test test-data reusable bioinformatics-data biowdl

Updated Jun 20, 2022
Python

Nekose / ICAP_Crawler

A web crawler which scrapes https://anapatterns.org. Visits each of the IC pattern pages, and collects the related antigens.

immunology bioinformatics-data iif hep-2-cells

Updated Jul 2, 2021
Python

gpiemont / pyeutils

Python interface to NCBI Eutils

bioinformatics bioinformatics-data ncbi eutils bioinformatics-tool pyeutils

Updated Oct 29, 2020
Python

hannahpersampieri / Microbiome-graph

Produces a network of given microbiome data

python r graph bioinformatics-data

Updated Aug 5, 2016
Python

akshayparopkari / shell-genomics

Covers the following bash commands cat, chmod, cd, cp, curl, head, history, ls, less, man, mkdir, mv, nano, pwd, rm, tail, wc, wget

shell bash bioinformatics genomics aws-cli bash-completion shell-scripts bash-script bioinformatics-data hacktoberfest shell-scripting bioinformatics-analysis bash-scripting genomic-data-analysis genomics-data

Updated Mar 8, 2021
Python

mansikath / Fasta-to-Genbank-Converter

A simple Python script using Biopython to convert FASTA files to GenBank format. The script prompts the user for input and output filenames, along with the molecule type (default is DNA). Ensure accurate and annotated GenBank files for your biological sequence data.

python python3 biopython genbank fasta molecular bioinformatics-data dna-sequences file-formats genbank-files

Updated Dec 27, 2023
Python

david4096 / sheepdog-exporter

Export metadata from the DCP sheepdog API. 🐑🐑

bioinformatics-data nihdatacommons

Updated Oct 5, 2018
Python

illusionic / Protein-protein-Interaction_Classification

A python solution towards classifying different protein-protein interactions among Protein Sequences.

classification lstm-model bioinformatics-data protein-protein-interaction

Updated Mar 2, 2019
Python

sciencegenome / BIGG-metabolic-analyzer-API

a API to BIGG metabolic databases

bioinformatics genome-annotation bioinformatics-data genome-analysis bioinformatics-scripts metabolic-models metabolic metabolic-database

Updated Oct 4, 2024
Python

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