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main.cpp
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main.cpp
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// ***********************************************************************
//
// miniVite
//
// ***********************************************************************
//
// Copyright (2018) Battelle Memorial Institute
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions
// are met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the copyright holder nor the names of its
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
// "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
// LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
// FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE
// COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
// INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
// BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
// LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN
// ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
// POSSIBILITY OF SUCH DAMAGE.
//
// ************************************************************************
#include <sys/resource.h>
#include <sys/time.h>
#include <unistd.h>
#include <cassert>
#include <cstdlib>
#include <fstream>
#include <iostream>
#include <sstream>
#include <string>
#include <omp.h>
#include <mpi.h>
#include "dspl.hpp"
static std::string inputFileName;
static int me, nprocs;
static int ranksPerNode = 1;
static GraphElem nvRGG = 0;
static bool generateGraph = false;
static bool readBalanced = false;
static bool showGraph = false;
static GraphWeight randomEdgePercent = 0.0;
static bool randomNumberLCG = false;
static bool isUnitEdgeWeight = true;
static GraphWeight threshold = 1.0E-6;
// parse command line parameters
static void parseCommandLine(const int argc, char * const argv[]);
int main(int argc, char *argv[])
{
double t0, t1, t2, t3, ti = 0.0;
int max_threads;
#ifdef _OPENMP
max_threads = omp_get_max_threads();
#else
max_threads = 1;
#endif
if (max_threads > 1) {
int provided;
MPI_Init_thread(&argc, &argv, MPI_THREAD_FUNNELED, &provided);
if (provided < MPI_THREAD_FUNNELED) {
std::cerr << "MPI library does not support MPI_THREAD_FUNNELED." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
} else {
MPI_Init(&argc, &argv);
}
MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
MPI_Comm_rank(MPI_COMM_WORLD, &me);
parseCommandLine(argc, argv);
createCommunityMPIType();
double td0, td1, td, tdt;
MPI_Barrier(MPI_COMM_WORLD);
td0 = MPI_Wtime();
Graph* g = nullptr;
// generate graph only supports RGG as of now
if (generateGraph) {
GenerateRGG gr(nvRGG);
g = gr.generate(randomNumberLCG, isUnitEdgeWeight, randomEdgePercent);
}
else { // read input graph
BinaryEdgeList rm;
if (readBalanced == true)
g = rm.read_balanced(me, nprocs, ranksPerNode, inputFileName);
else
g = rm.read(me, nprocs, ranksPerNode, inputFileName);
}
assert(g != nullptr);
if (showGraph)
g->print();
#ifdef PRINT_DIST_STATS
g->print_dist_stats();
#endif
MPI_Barrier(MPI_COMM_WORLD);
#ifdef DEBUG_PRINTF
assert(g);
#endif
td1 = MPI_Wtime();
td = td1 - td0;
MPI_Reduce(&td, &tdt, 1, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
if (me == 0) {
if (!generateGraph)
std::cout << "Time to read input file and create distributed graph (in s): "
<< (tdt/nprocs) << std::endl;
else
std::cout << "Time to generate distributed graph of "
<< nvRGG << " vertices (in s): " << (tdt/nprocs) << std::endl;
}
GraphWeight currMod = -1.0;
GraphWeight prevMod = -1.0;
double total = 0.0;
std::vector<GraphElem> ssizes, rsizes, svdata, rvdata;
#if defined(USE_MPI_RMA)
MPI_Win commwin;
#endif
size_t ssz = 0, rsz = 0;
int iters = 0;
MPI_Barrier(MPI_COMM_WORLD);
t1 = MPI_Wtime();
#if defined(USE_MPI_RMA)
currMod = distLouvainMethod(me, nprocs, *g, ssz, rsz, ssizes, rsizes,
svdata, rvdata, currMod, threshold, iters, commwin);
#else
currMod = distLouvainMethod(me, nprocs, *g, ssz, rsz, ssizes, rsizes,
svdata, rvdata, currMod, threshold, iters);
#endif
MPI_Barrier(MPI_COMM_WORLD);
t0 = MPI_Wtime();
total = t0 - t1;
double tot_time = 0.0;
MPI_Reduce(&total, &tot_time, 1, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
if (me == 0) {
double avgt = (tot_time / nprocs);
if (!generateGraph) {
std::cout << "-------------------------------------------------------" << std::endl;
std::cout << "File: " << inputFileName << std::endl;
std::cout << "-------------------------------------------------------" << std::endl;
}
std::cout << "-------------------------------------------------------" << std::endl;
#ifdef USE_32_BIT_GRAPH
std::cout << "32-bit datatype" << std::endl;
#else
std::cout << "64-bit datatype" << std::endl;
#endif
std::cout << "-------------------------------------------------------" << std::endl;
std::cout << "Average total time (in s), #Processes: " << avgt << ", " << nprocs << std::endl;
std::cout << "Modularity, #Iterations: " << currMod << ", " << iters << std::endl;
std::cout << "MODS (final modularity * average time): " << (currMod * avgt) << std::endl;
std::cout << "-------------------------------------------------------" << std::endl;
}
MPI_Barrier(MPI_COMM_WORLD);
delete g;
destroyCommunityMPIType();
MPI_Finalize();
return 0;
} // main
void parseCommandLine(const int argc, char * const argv[])
{
int ret;
while ((ret = getopt(argc, argv, "f:br:t:n:wlp:s")) != -1) {
switch (ret) {
case 'f':
inputFileName.assign(optarg);
break;
case 'b':
readBalanced = true;
break;
case 'r':
ranksPerNode = atoi(optarg);
break;
case 't':
threshold = atof(optarg);
break;
case 'n':
nvRGG = atol(optarg);
if (nvRGG > 0)
generateGraph = true;
break;
case 'w':
isUnitEdgeWeight = false;
break;
case 'l':
randomNumberLCG = true;
break;
case 'p':
randomEdgePercent = atof(optarg);
break;
case 's':
showGraph = true;
break;
default:
assert(0 && "Option not recognized!!!");
break;
}
}
if (me == 0 && (argc == 1)) {
std::cerr << "Must specify some options." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
if (me == 0 && !generateGraph && inputFileName.empty()) {
std::cerr << "Must specify a binary file name with -f or provide parameters for generating a graph." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
if (me == 0 && !generateGraph && randomNumberLCG) {
std::cerr << "Must specify -g for graph generation using LCG." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
if (me == 0 && !generateGraph && (randomEdgePercent > 0.0)) {
std::cerr << "Must specify -g for graph generation first to add random edges to it." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
if (me == 0 && !generateGraph && !isUnitEdgeWeight) {
std::cerr << "Must specify -g for graph generation first before setting edge weights." << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
if (me == 0 && generateGraph && ((randomEdgePercent < 0) || (randomEdgePercent >= 100))) {
std::cerr << "Invalid random edge percentage for generated graph!" << std::endl;
MPI_Abort(MPI_COMM_WORLD, -99);
}
} // parseCommandLine