diff --git a/cliv2/go.mod b/cliv2/go.mod
index 6761a78157..b1fe81eb9b 100644
--- a/cliv2/go.mod
+++ b/cliv2/go.mod
@@ -15,7 +15,7 @@ require (
 	github.com/snyk/cli-extension-sbom v0.0.0-20241016065306-0df2be5b3b8f
 	github.com/snyk/container-cli v0.0.0-20240821111304-7ca1c415a5d7
 	github.com/snyk/error-catalog-golang-public v0.0.0-20250121101159-e6a61b2bfae6
-	github.com/snyk/go-application-framework v0.0.0-20250210203133-5b0f3252d77d
+	github.com/snyk/go-application-framework v0.0.0-20250212121528-2e787c13a2cc
 	github.com/snyk/go-httpauth v0.0.0-20240307114523-1f5ea3f55c65
 	github.com/snyk/snyk-iac-capture v0.6.5
 	github.com/snyk/snyk-ls v0.0.0-20250211120001-7122ee6defea
@@ -168,7 +168,7 @@ require (
 	github.com/shirou/gopsutil v3.21.11+incompatible // indirect
 	github.com/sirupsen/logrus v1.9.3 // indirect
 	github.com/skeema/knownhosts v1.3.0 // indirect
-	github.com/snyk/code-client-go v1.13.0 // indirect
+	github.com/snyk/code-client-go v1.13.1 // indirect
 	github.com/snyk/policy-engine v0.33.0 // indirect
 	github.com/sourcegraph/conc v0.3.0 // indirect
 	github.com/sourcegraph/go-lsp v0.0.0-20240223163137-f80c5dd31dfd // indirect
diff --git a/cliv2/go.sum b/cliv2/go.sum
index 9b7dbff460..7d19f85067 100644
--- a/cliv2/go.sum
+++ b/cliv2/go.sum
@@ -772,14 +772,14 @@ github.com/snyk/cli-extension-iac-rules v0.0.0-20250121103856-ea5f31e53509 h1:4L
 github.com/snyk/cli-extension-iac-rules v0.0.0-20250121103856-ea5f31e53509/go.mod h1:eaSq1kwY3uGF8bGVYDuv2E3AbzOlCRhdseGhKPvG4OM=
 github.com/snyk/cli-extension-sbom v0.0.0-20241016065306-0df2be5b3b8f h1:dlL+f+5sjHj4JCzW/Evl1x9UREXLyc3M4KjoZvQx0Bs=
 github.com/snyk/cli-extension-sbom v0.0.0-20241016065306-0df2be5b3b8f/go.mod h1:5CaY1bgvJY/uoG/1plLOf8T8o9AkwoBIGvw34RfRLZw=
-github.com/snyk/code-client-go v1.13.0 h1:Hjlfdie7DbMvIDaDdCuY29Z9Z4isvFuAX+u3wevCjWA=
-github.com/snyk/code-client-go v1.13.0/go.mod h1:jMRi+hf0T4472k390nGIM5/ZA7bufXlD72TBPmuWdVQ=
+github.com/snyk/code-client-go v1.13.1 h1:JWQIrHOg/HYs0yqLmv1kNASwNhKXSYOcZsHU3QEugLk=
+github.com/snyk/code-client-go v1.13.1/go.mod h1:jMRi+hf0T4472k390nGIM5/ZA7bufXlD72TBPmuWdVQ=
 github.com/snyk/container-cli v0.0.0-20240821111304-7ca1c415a5d7 h1:Zn5BcV76oFAbJm5tDygU945lvoZ3yY8FoRFDC3YpwF8=
 github.com/snyk/container-cli v0.0.0-20240821111304-7ca1c415a5d7/go.mod h1:38w+dcAQp9eG3P5t2eNS9eG0reut10AeJjLv5lJ5lpM=
 github.com/snyk/error-catalog-golang-public v0.0.0-20250121101159-e6a61b2bfae6 h1:qY954YMn/7TaapgatD1bn4hfGQSmu56W6EgS2m8c++I=
 github.com/snyk/error-catalog-golang-public v0.0.0-20250121101159-e6a61b2bfae6/go.mod h1:Ytttq7Pw4vOCu9NtRQaOeDU2dhBYUyNBe6kX4+nIIQ4=
-github.com/snyk/go-application-framework v0.0.0-20250210203133-5b0f3252d77d h1:Qhe0N1em8naODCCTXU12UHC4Te9FgwYAS32pzyRIAi8=
-github.com/snyk/go-application-framework v0.0.0-20250210203133-5b0f3252d77d/go.mod h1:ag3sCoHGCn534oDAnAXLcjZEZljW3oMOfKCzpmFX060=
+github.com/snyk/go-application-framework v0.0.0-20250212121528-2e787c13a2cc h1:4+Dikq3mURoCWgAwK5JOXQbBppF7EfdF8a4Ev5M2ZOQ=
+github.com/snyk/go-application-framework v0.0.0-20250212121528-2e787c13a2cc/go.mod h1:hqn5+hhsz17IC/BhsMcUQUKiyyb3txYzudu1mqs47Jo=
 github.com/snyk/go-httpauth v0.0.0-20240307114523-1f5ea3f55c65 h1:CEQuYv0Go6MEyRCD3YjLYM2u3Oxkx8GpCpFBd4rUTUk=
 github.com/snyk/go-httpauth v0.0.0-20240307114523-1f5ea3f55c65/go.mod h1:88KbbvGYlmLgee4OcQ19yr0bNpXpOr2kciOthaSzCAg=
 github.com/snyk/policy-engine v0.33.0 h1:nXH4LEVrYbEuSEq4RJBObRY2fduaXiovAJt3Kni1baY=
diff --git a/test/jest/acceptance/snyk-code/snyk-code.spec.ts b/test/jest/acceptance/snyk-code/snyk-code.spec.ts
index 8f64205266..d96bc572a2 100644
--- a/test/jest/acceptance/snyk-code/snyk-code.spec.ts
+++ b/test/jest/acceptance/snyk-code/snyk-code.spec.ts
@@ -617,7 +617,7 @@ describe('snyk code test', () => {
                   }
                 });
 
-                it('with --severity-threashold', async () => {
+                it('with --severity-threshold', async () => {
                   const { stdout, stderr, code } = await runSnykCLI(
                     `code test ${pathToTest} --severity-threshold=high --sarif-file-output=${sarifFile}`,
                     {
@@ -670,6 +670,26 @@ describe('snyk code test', () => {
               });
             },
           );
+
+          describe(`with ignored issues`, () => {
+            it('test a single file', async () => {
+              const { stderr, code } = await runSnykCLI(
+                `code test ${localPath}/routes/index.js --sarif-file-output=${sarifFile}`,
+                {
+                  env: {
+                    ...process.env,
+                    ...integrationEnv,
+                  },
+                },
+              );
+
+              expect(code).toBe(0);
+              expect(stderr).toBe('');
+
+              // Verify SARIF file
+              checkSarif(sarifFile, 4);
+            });
+          });
         }
       });
     },