repositories Search Results · topic:gehlenborglab org:hms-dbmi

Filter by

• • Code... (...)results
  • Repositories29 (29)results
  • Issues1k (1k)results
  • Pull requests8k (8k)results
  • Discussions23 (23)results
  • Users1 (1)results
  • More

• Languages

  • JavaScript
  • Jupyter Notebook
  • R
  • HTML
  • Shell
  • TypeScript
  • CSS
  • Python
  • More languages...

• Advanced

  • Owner
  • Size
  • Number of followers
  • Number of forks
  • Number of stars
  • Date created
  • Date pushed
  • Topic
  • License
  • Archived
  • Public
  • Private
• Advanced search

Repositories29 (29)

29 results

 (160 ms)

29 results

inhms-dbmi (press backspace or delete to remove)

Sort by: Best match

Filter

hms-dbmi/UpSetR

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

visualization

ggplot2

rstats

upsetr

upset

• R
·
• 785
·
• Updated
  on Aug 4, 2024

Star

hms-dbmi/viv

Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

imaging

ome-tiff

openmicroscopy

gehlenborglab

zarr

• JavaScript
·
• 303
·
• Updated
  4 days ago

Star

hms-dbmi/hic-data-analysis-bootcamp

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

data-visualization

hi-c

higlass

cooler

4d-nucleome-network

• Jupyter Notebook
·
• 196
·
• Updated
  on May 19, 2018

Star

hms-dbmi/vizarr

A minimal Zarr image viewer based on Viv.

jupyter-notebooks

gehlenborglab

zarr

viv

imjoy

• TypeScript
·
• 142
·
• Updated
  4 days ago

Star

hms-dbmi/3d-genome-processing-tutorial

A 3D genome data processing tutorial for ISMB/ECCB 2017

visualization

tutorial

hi-c

higlass

4d-nucleome-network

• Jupyter Notebook
·
• 50
·
• Updated
  on Jul 21, 2017

Star

hms-dbmi/upset-altair-notebook

Jupyter Notebooks and other code for Altair-based Interactive UpSet Plots

vega

altair

upset

gehlenborglab

• Jupyter Notebook
·
• 31
·
• Updated
  on Dec 1, 2021

Star

hms-dbmi/halyos

Redesigning the Patient Portal Experience with SMART on FHIR.

visualization

fhir

ehr

smart-on-fhir

fhir-client

• JavaScript
·
• 23
·
• Updated
  on Oct 31, 2021

Star

hms-dbmi/UpSetR-shiny

A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).

visualization

upsetr

upset

gehlenborglab

• R
·
• 21
·
• Updated
  on Aug 28, 2017

Star

hms-dbmi/genocat

Genomic Visualization Catalog

gehlenborglab

• HTML
·
• 13
·
• Updated
  on Oct 6, 2022

Star

hms-dbmi/cistrome-explorer

Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling

higlass

gehlenborglab

• Jupyter Notebook
·
• 13
·
• Updated
  on Nov 10, 2023

Star

Sponsor open source projects you depend on

Contributors are working behind the scenes to make open source better for everyone—give them the help and recognition they deserve.Explore sponsorable projects

ProTip! 

Press the

/

key to activate the search input again and adjust your query.

Sponsor open source projects you depend on

Contributors are working behind the scenes to make open source better for everyone—give them the help and recognition they deserve.Explore sponsorable projects

ProTip! 

Press the

/

key to activate the search input again and adjust your query.