From d14aa39e90838ce31c389168cf6f2d160a58f70a Mon Sep 17 00:00:00 2001 From: sbalci Date: Sun, 31 Mar 2019 22:42:55 +0300 Subject: [PATCH] analysis of pancreas studies started --- BibliographicStudies.Rmd | 10 + BibliographicStudies.nb.html | 38 +- PancreasStudies.Rmd | 254 ++ PancreasStudies.nb.html | 3267 +++++++++++++++++ ...omTurkeyComparedtoAllPublishedArticles.Rmd | 215 ++ ...rkeyComparedtoAllPublishedArticles.nb.html | 158 +- Sources.Rmd | 24 + Sources.nb.html | 44 +- USCAPAbstractsPublishedArticles.Rmd | 103 + USCAPAbstractsPublishedArticles.nb.html | 2226 +++++++++++ Vosviewer.Rmd | 20 + Vosviewer.nb.html | 1818 +++++++++ WOS.Rmd | 57 +- WOS.nb.html | 1524 +++++++- scopus.Rmd | 14 + scopus.nb.html | 1817 +++++++++ 16 files changed, 11541 insertions(+), 48 deletions(-) create mode 100644 PancreasStudies.Rmd create mode 100644 PancreasStudies.nb.html create mode 100644 USCAPAbstractsPublishedArticles.Rmd create mode 100644 USCAPAbstractsPublishedArticles.nb.html create mode 100644 Vosviewer.Rmd create mode 100644 Vosviewer.nb.html create mode 100644 scopus.Rmd create mode 100644 scopus.nb.html diff --git a/BibliographicStudies.Rmd b/BibliographicStudies.Rmd index 51d023b..29e3628 100644 --- a/BibliographicStudies.Rmd +++ b/BibliographicStudies.Rmd @@ -66,6 +66,11 @@ In this analysis we aimed to identify the common research topics Turkish patholo [MeSH Terms Pathology Articles From Turkey](https://sbalci.github.io/pubmed/MeSH_Terms_Pathology_Articles_From_Turkey.html) +--- + + + + --- @@ -116,6 +121,11 @@ In this analysis we aimed to identify the common research topics Turkish patholo +--- + + + + --- diff --git a/BibliographicStudies.nb.html b/BibliographicStudies.nb.html index 54f4cdc..f7ea32c 100644 --- a/BibliographicStudies.nb.html +++ b/BibliographicStudies.nb.html @@ -11,7 +11,7 @@ - + Bibliographic Studies @@ -2551,7 +2551,7 @@ var currentIndex = 1; // select all R code blocks - var rCodeBlocks = $('pre.r, pre.python, pre.bash, pre.sql, pre.cpp, pre.stan'); + var rCodeBlocks = $('pre.r, pre.python, pre.bash, pre.sql, pre.cpp, pre.stan, pre.julia'); rCodeBlocks.each(function() { // create a collapsable div to wrap the code in @@ -2640,9 +2640,7 @@ - - -
- + + + + + + + +
+ +
@@ -2893,9 +2899,9 @@

Bibliographic Studies

-

Reproducible Bibliometric Analysis of Pathology Articles Using PubMed, E-direct, WoS, Google Scholar

-

Serdar Balcı, MD, Pathologist

-

2019-01-13

+

Reproducible Bibliometric Analysis of Pathology Articles Using PubMed, E-direct, WoS, Google Scholar

+

Serdar Balcı, MD, Pathologist

+

2019-03-30

@@ -2910,7 +2916,7 @@

1 Introduction

If you want to see the code used in the analysis please click the code button on the right upper corner or throughout the page.

I would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3

-

This document will be continiously updated and the last update was on 2019-01-13.

+

This document will be continiously updated and the last update was on 2019-03-30.

@@ -2929,6 +2935,8 @@

2.2 Articles per Journals per Cou

2.3 Most Common MeSH Terms and Keywords used in Pathology Articles from Turkey

In this analysis we aimed to identify the common research topics Turkish pathologists are interested. We extracted most common MeSH terms and keywords from PubMed articles using EDirect: MeSH Terms Pathology Articles From Turkey

+ +
@@ -2952,6 +2960,8 @@

2.3 Most Common MeSH Terms and Ke
+ +
@@ -2999,7 +3009,7 @@

3 Sources Used For Analysis

4 Feedback

Serdar Balcı, MD, Pathologist would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3

-

This document will be continiously updated and the last update was on 2019-01-13.

+

This document will be continiously updated and the last update was on 2019-03-30.

+ + +```{r global_options, include=FALSE} +knitr::opts_chunk$set(fig.width = 12, fig.height = 8, + # fig.path = 'figures/', + echo = FALSE, warning = FALSE, message = FALSE, error = FALSE, eval = TRUE, tidy = TRUE, comment = NA) +``` + +```{r library, include=FALSE} +library(tidyverse) +``` + + + + +# Introduction + +- Selected Pathology Journals are used for the query^[[Selected Pathology Journals](PancreasStudies/data/journal_list_from_my_collections)] + + + + +# PubMed + +## Data Download from PubMed via EDirect + +- Data is downloaded from PubMed via Edirect^[https://dataguide.nlm.nih.gov/edirect/overview.html] + +- + + +## rentrez + +# europepmc + + + +# WOS + +[WOS.Rmd](WOS.Rmd) + +```{r} +PMID_List_for_WOS_pancreas <- paste0("PMID=(", pmid_only_path_journals$PMID, ") OR") + +write(PMID_List_for_WOS_pancreas, + here::here("PancreasStudies/data/PMID_List_for_WOS_pancreas.txt") +) + +``` + + + + + + + +# Scopus + +[scopus.Rmd](scopus.Rmd) + + +# Vosviewer + +Author Thesaurus is used.^[[Author Thesaurus](data/thesaurus_authors.txt)] + +Code for interactive graph.^[[Interactive Graph Code](data/VOSviewer_interactive_graphcode.txt)] + + + + + + +# Cite Space + +# CitNetExplorer + +# Lens + +``` +(citation_id_type: "pmid" AND citation_id: 28984336) OR (citation_id_type: "pmid" AND citation_id: 21682559) +``` + +```{r} +pmid_only_path_journals <- +read_delim("PancreasStudies/data/pmid_only_path_journals.txt", "\n", col_names = "PMID", col_types = "c") + +pmid_only_path_journals2 <- paste0("(citation_id_type: 'pmid' AND citation_id:",pmid_only_path_journals$PMID, ") OR ", collapse = "") + +write(pmid_only_path_journals2, +"PancreasStudies/data/lensSearch.txt" +) +``` + + + + +# openknowledgemaps + +Open Knowledge Maps (2019). Overview of research on intraductal tubulopapillary neoplasm. Retrieved from https://openknowledgemaps.org/map/cc04c53301920a93d451aa2ce3010243/ [30 Mar 2019]. + + +# bibliometrix + +# ORCID + +# Semantic Scholar + +[SemanticScholar.Rmd](SemanticScholar.Rmd) + + +# Microsoft Academic + +# Scopus + +# Altmetrics + + + +# Grid + +https://grid.ac/ + + +# ROR + +https://ror.org/search?page=1&query=turkey + + +# Cobalmetrics + +https://cobaltmetrics.com/ + +- Toward privacy-preserving altmetrics exploration with Cobaltmetrics and ORCID + +https://medium.com/thunken/toward-privacy-preserving-altmetrics-exploration-with-cobaltmetrics-and-orcid-f5ab6fa7898a + + +# OpenCitations + +http://opencitations.net + +http://opencitations.net/download + +http://opencitations.net/corpus + +https://github.com/opencitations + +- The OpenCitations Data Model +https://figshare.com/articles/Metadata_for_the_OpenCitations_Corpus/3443876 + +- Creating Open Citation Data with BCite +https://semsci.github.io/SemSci2018/papers/1/bcite-semsci2018.html + +https://github.com/opencitations/bcite + + +# Open Knowledge Maps + +Open Knowledge Maps (2019). Overview of research on (pathology[affiliation] or patoloji[affiliation]) and (turkey[affiliation] or türkiye[affiliation]). Retrieved from https://openknowledgemaps.org/map/e4dbf6c89015e402d6d7d560ab79e17a/ [30 Mar 2019]. + + +https://openknowledgemaps.org/index + + + +# iris.ai + +https://the.iris.ai/map/02f89d24-0415-43ab-878a-853ec17c5a59 + +# lens.org + +https://www.lens.org/lens/scholar/search/results?dateFilterField=year_published&filterMap=%7B%7D&orcids=0000-0002-7852-3851&orderBy=%2Bpublished&preview=true&previewType=SCHOLAR_ANALYSIS®exEnabled=false + +https://www.lens.org/lens/scholar/search/results?q=(author.affiliation.name:%20%22pathology%22%20%20OR%20author.affiliation.name:%20%22patoloji%22)%20%20AND%20(author.affiliation.name:%20%22Turkey%22%20%20OR%20author.affiliation.name:%20%22T%C3%BCrkiye%22) + +https://www.lens.org/lens/scholar/search/analysis?q=(author.affiliation.name:%20%22neurosurgery%22%20%20OR%20author.affiliation.name:%20%22sport%22%20)%20AND%20(abstract:%20%22sport%22%20%20OR%20title:%20%22sport%22)&page=0&limit=10&orderBy=%2Bscore&dateFilterField=year_published&preview=false®exEnabled=false + + +# To Do + +- find a way to auto import journal names +- remove last OR +- Auto run posiible analysis via cron +- Find a way to auto copy into googledrive +- push to blog, netlify ... +- Add from +-- [Sources.Rmd](Sources.Rmd) +-- [Bibliyometri.Rmd](Bibliyometri.Rmd) + + + + +# About & Feedback + + +[Serdar Balcı, MD, Pathologist](https://github.com/sbalci) would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3 + +This document will be continiously updated and the last update was on `r Sys.Date()`. + +--- + + + +
+ + + +--- + +# References + + + + diff --git a/PancreasStudies.nb.html b/PancreasStudies.nb.html new file mode 100644 index 0000000..9d04fc5 --- /dev/null +++ b/PancreasStudies.nb.html @@ -0,0 +1,3267 @@ + + + + + + + + + + + + + + + +Pancreas Studies in Various Bibliometric Tools + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + + +
+
+
+
+
+ +
+ + + + + + + + + + + + + + + + +
+

1 Introduction

+
    +
  • Selected Pathology Journals are used for the query1
    • +
+
+
+

2 PubMed

+
+

2.1 Data Download from PubMed via EDirect

+
    +

  • Data is downloaded from PubMed via Edirect2

    • +
  • +
+
+
+

2.2 rentrez

+
+
+
+

3 europepmc

+
+ +
+

5 Scopus

+

scopus.Rmd

+
+
+

6 Vosviewer

+

Author Thesaurus is used.3

+

Code for interactive graph.4

+
+
+

7 Cite Space

+
+
+

8 CitNetExplorer

+
+ +
+

10 openknowledgemaps

+

Open Knowledge Maps (2019). Overview of research on intraductal tubulopapillary neoplasm. Retrieved from https://openknowledgemaps.org/map/cc04c53301920a93d451aa2ce3010243/ [30 Mar 2019].

+
+
+

11 bibliometrix

+
+
+

12 ORCID

+
+
+

13 Semantic Scholar

+

SemanticScholar.Rmd

+
+
+

14 Microsoft Academic

+
+
+

15 Scopus

+
+
+

16 Altmetrics

+
+
+

17 Grid

+

https://grid.ac/

+
+ +
+

19 Cobalmetrics

+

https://cobaltmetrics.com/

+
    +
  • Toward privacy-preserving altmetrics exploration with Cobaltmetrics and ORCID
    • +
+

https://medium.com/thunken/toward-privacy-preserving-altmetrics-exploration-with-cobaltmetrics-and-orcid-f5ab6fa7898a

+
+ +
+

21 Open Knowledge Maps

+

Open Knowledge Maps (2019). Overview of research on (pathology[affiliation] or patoloji[affiliation]) and (turkey[affiliation] or türkiye[affiliation]). Retrieved from https://openknowledgemaps.org/map/e4dbf6c89015e402d6d7d560ab79e17a/ [30 Mar 2019].

+

https://openknowledgemaps.org/index

+
+ + +
+

24 To Do

+
    +
  • find a way to auto import journal names
    • +
  • remove last OR
    • +
  • Auto run posiible analysis via cron
    • +
  • Find a way to auto copy into googledrive
    • +
  • push to blog, netlify …
    • +
  • Add from – Sources.Rmd
    +– Bibliyometri.Rmd
    • +
+
+
+

25 About & Feedback

+

Serdar Balcı, MD, Pathologist would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3

+

This document will be continiously updated and the last update was on 2019-03-31.

+
+ +
+ +
+ + +
+
+
+

26 References

+ +
+
+
+
    +

  1. Selected Pathology Journals↩

    2. +

  2. https://dataguide.nlm.nih.gov/edirect/overview.html↩

    3. +

  3. Author Thesaurus↩

    4. +

  4. Interactive Graph Code↩

    5. +
+
+ +
---
title: "Pancreas Studies in Various Bibliometric Tools"
subtitle: "Pancreas Studies in Pathology Journals"
author: "Serdar Balcı, MD, Pathologist"
date: '`r format(Sys.Date())`'
output: 
  html_notebook: 
    code_folding: hide
    fig_caption: yes
    highlight: monochrome
    number_sections: yes
    theme: paper
    toc: yes
    toc_depth: 5
    toc_float: yes
---

<!-- Open all links in new tab-->  
<!-- <base target="_blank"/>    -->


<!-- Go to www.addthis.com/dashboard to customize your tools --> <script type="text/javascript" src="//s7.addthis.com/js/300/addthis_widget.js#pubid=ra-5bc36900a405090b">  
</script> 


```{r global_options, include=FALSE}
knitr::opts_chunk$set(fig.width = 12, fig.height = 8, 
                      # fig.path = 'figures/',
                      echo = FALSE, warning = FALSE, message = FALSE, error = FALSE, eval = TRUE, tidy = TRUE, comment = NA)
```

```{r library, include=FALSE}
library(tidyverse)
```




# Introduction

- Selected Pathology Journals are used for the query^[[Selected Pathology Journals](PancreasStudies/data/journal_list_from_my_collections)]




# PubMed

## Data Download from PubMed via EDirect

- Data is downloaded from PubMed via Edirect^[https://dataguide.nlm.nih.gov/edirect/overview.html]

- 


## rentrez

# europepmc



# WOS

[WOS.Rmd](WOS.Rmd)

```{r}
PMID_List_for_WOS_pancreas <- paste0("PMID=(", pmid_only_path_journals$PMID, ") OR")

write(PMID_List_for_WOS_pancreas,
      here::here("PancreasStudies/data/PMID_List_for_WOS_pancreas.txt")
)

```







# Scopus

[scopus.Rmd](scopus.Rmd)


# Vosviewer

Author Thesaurus is used.^[[Author Thesaurus](data/thesaurus_authors.txt)]

Code for interactive graph.^[[Interactive Graph Code](data/VOSviewer_interactive_graphcode.txt)]






# Cite Space

# CitNetExplorer

# Lens

```
(citation_id_type: "pmid"  AND citation_id: 28984336)  OR (citation_id_type: "pmid"  AND citation_id: 21682559)
```

```{r}
pmid_only_path_journals <- 
read_delim("PancreasStudies/data/pmid_only_path_journals.txt", "\n", col_names = "PMID", col_types = "c")

pmid_only_path_journals2 <- paste0("(citation_id_type: 'pmid'  AND citation_id:",pmid_only_path_journals$PMID, ") OR ", collapse = "")

write(pmid_only_path_journals2,
"PancreasStudies/data/lensSearch.txt"
)
```




# openknowledgemaps

Open Knowledge Maps (2019). Overview of research on intraductal tubulopapillary neoplasm. Retrieved from https://openknowledgemaps.org/map/cc04c53301920a93d451aa2ce3010243/ [30 Mar 2019]. 


# bibliometrix

# ORCID

# Semantic Scholar

[SemanticScholar.Rmd](SemanticScholar.Rmd)


# Microsoft Academic

# Scopus

# Altmetrics



# Grid

https://grid.ac/


# ROR

https://ror.org/search?page=1&query=turkey


# Cobalmetrics

https://cobaltmetrics.com/

- Toward privacy-preserving altmetrics exploration with Cobaltmetrics and ORCID

https://medium.com/thunken/toward-privacy-preserving-altmetrics-exploration-with-cobaltmetrics-and-orcid-f5ab6fa7898a


# OpenCitations

http://opencitations.net

http://opencitations.net/download

http://opencitations.net/corpus

https://github.com/opencitations

- The OpenCitations Data Model  
https://figshare.com/articles/Metadata_for_the_OpenCitations_Corpus/3443876

- Creating Open Citation Data with BCite  
https://semsci.github.io/SemSci2018/papers/1/bcite-semsci2018.html

https://github.com/opencitations/bcite


# Open Knowledge Maps

Open Knowledge Maps (2019). Overview of research on (pathology[affiliation] or patoloji[affiliation]) and (turkey[affiliation] or türkiye[affiliation]). Retrieved from https://openknowledgemaps.org/map/e4dbf6c89015e402d6d7d560ab79e17a/ [30 Mar 2019]. 


https://openknowledgemaps.org/index



# iris.ai

https://the.iris.ai/map/02f89d24-0415-43ab-878a-853ec17c5a59

# lens.org

https://www.lens.org/lens/scholar/search/results?dateFilterField=year_published&filterMap=%7B%7D&orcids=0000-0002-7852-3851&orderBy=%2Bpublished&preview=true&previewType=SCHOLAR_ANALYSIS&regexEnabled=false

https://www.lens.org/lens/scholar/search/results?q=(author.affiliation.name:%20%22pathology%22%20%20OR%20author.affiliation.name:%20%22patoloji%22)%20%20AND%20(author.affiliation.name:%20%22Turkey%22%20%20OR%20author.affiliation.name:%20%22T%C3%BCrkiye%22)

https://www.lens.org/lens/scholar/search/analysis?q=(author.affiliation.name:%20%22neurosurgery%22%20%20OR%20author.affiliation.name:%20%22sport%22%20)%20AND%20(abstract:%20%22sport%22%20%20OR%20title:%20%22sport%22)&page=0&limit=10&orderBy=%2Bscore&dateFilterField=year_published&preview=false&regexEnabled=false


# To Do

- find a way to auto import journal names
- remove last OR
- Auto run posiible analysis via cron
- Find a way to auto copy into googledrive
- push to blog, netlify ...
- Add from
-- [Sources.Rmd](Sources.Rmd)  
-- [Bibliyometri.Rmd](Bibliyometri.Rmd)  




# About & Feedback


[Serdar Balcı, MD, Pathologist](https://github.com/sbalci) would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3

This document will be continiously updated and the last update was on `r Sys.Date()`.

---

<script id="dsq-count-scr" src="//https-sbalci-github-io.disqus.com/count.js" async></script>

<div id="disqus_thread"></div>
<script>

/**
*  RECOMMENDED CONFIGURATION VARIABLES: EDIT AND UNCOMMENT THE SECTION BELOW TO INSERT DYNAMIC VALUES FROM YOUR PLATFORM OR CMS.
*  LEARN WHY DEFINING THESE VARIABLES IS IMPORTANT: https://disqus.com/admin/universalcode/#configuration-variables*/
/*
var disqus_config = function () {
this.page.url = PAGE_URL;  // Replace PAGE_URL with your page's canonical URL variable
this.page.identifier = PAGE_IDENTIFIER; // Replace PAGE_IDENTIFIER with your page's unique identifier variable
};
*/
(function() { // DON'T EDIT BELOW THIS LINE
var d = document, s = d.createElement('script');
s.src = 'https://https-sbalci-github-io.disqus.com/embed.js';
s.setAttribute('data-timestamp', +new Date());
(d.head || d.body).appendChild(s);
})();
</script>
<noscript>Please enable JavaScript to view the <a href="https://disqus.com/?ref_noscript">comments powered by Disqus.</a></noscript>

---

# References





+ + +
+
+ +
+ + + + + + + + diff --git a/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.Rmd b/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.Rmd index b9e2285..5d993d3 100644 --- a/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.Rmd +++ b/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.Rmd @@ -139,6 +139,221 @@ Indexes=SCI-EXPANDED, SSCI, A&HCI, CPCI-S, CPCI-SSH, BKCI-S, BKCI-SSH, ESCI Time ``` +# Hacettepe[Affiliation] AND Pathology[Affiliation] +```{r Search PubMed download all articles uid, eval=FALSE, include=FALSE} +myTerm <- rstudioapi::terminalCreate(show = FALSE) +rstudioapi::terminalSend( + myTerm, + "esearch -db pubmed -query \"hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])\" -datetype PDAT -mindate 1800 -maxdate 3000 | \ efetch -format uid > data/pubmed_result_hacettepe_pathology_uid.txt \n" +) +Sys.sleep(1) +repeat { + Sys.sleep(0.1) + if (rstudioapi::terminalBusy(myTerm) == FALSE) { + print("Code Executed") + break + } +} + +file.info(here::here("data/pubmed_result_hacettepe_pathology_uid.txt"))$ctime +``` + + +```{r Search PubMed download all articles xml, eval=FALSE, include=FALSE} +myTerm <- rstudioapi::terminalCreate(show = FALSE) +rstudioapi::terminalSend( + myTerm, + "esearch -db pubmed -query \"hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])\" -datetype PDAT -mindate 1800 -maxdate 3000 | \ efetch -format xml > data/pubmed_result_hacettepe_pathology_uid.xml \n" +) +Sys.sleep(1) +repeat { + Sys.sleep(0.1) + if (rstudioapi::terminalBusy(myTerm) == FALSE) { + print("Code Executed") + break + } +} + +file.info(here::here("data/pubmed_result_hacettepe_pathology_uid.xml"))$ctime +``` + + + + +```{r extract if pathology and hacettepe in same affiliation, eval=FALSE, include=FALSE} + +myTerm <- rstudioapi::terminalCreate(show = FALSE) +rstudioapi::terminalSend( +myTerm, +"xtract -input data/pubmed_result_hacettepe_pathology_uid.xml -pattern PubmedArticle -tab \"|\" -sep \";\" -def \"NA\" -element MedlineCitation/PMID ArticleTitle Journal/ISSN ISOAbbreviation PubDate/Year Affiliation> data/data_hacettepepathology.csv \n" +) +Sys.sleep(1) +repeat { +Sys.sleep(0.1) +if (rstudioapi::terminalBusy(myTerm) == FALSE) { +print("Code Executed") +break +} +} + +``` + + +## read extracted data + + +```{r read data} +library(readr) +data_hacettepePathology <- read_delim(here::here("data/data_hacettepepathology.csv"), + "|", + escape_double = FALSE, + col_names = FALSE, + trim_ws = TRUE) +# View(data_hacettepePathology) + +names(data_hacettepePathology) <- c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate", "Affiliation") + +``` + + +```{r separate affiliations} +library(tidyverse) +library(stringr) +str_count(string = data_hacettepePathology$Affiliation, pattern = ";") %>% + max() + +``` + + +```{r plain affiliation characters, include=FALSE} + +# to.plain <- function(s) { +# # 1 character substitutions +# old1 <- "çğşıüöÇĞŞİÖÜ" +# new1 <- "cgsiuocgsiou" +# s1 <- chartr(old1, new1, s) +# # 2 character substitutions +# old2 <- c("œ", "ß", "æ", "ø") +# new2 <- c("oe", "ss", "ae", "oe") +# s2 <- s1 +# for(i in seq_along(old2)) s2 <- gsub(old2[i], new2[i], s2, fixed = TRUE) +# s2 +# } + +data_hacettepePathology2 <- data_hacettepePathology %>% + select(PMID, Affiliation) + + +# [[:alpha:]] + + + +# data_hacettepePathology2$Affiliation <- data_hacettepePathology2$Affiliation %>% +# tolower() %>% +# to.plain() + + +data_hacettepePathology2 <- data_hacettepePathology2 %>% + separate(col = "Affiliation", sep = ";", into = paste0("Affiliation", 1:6925)) + + +``` + + + + +```{r} +library(tidyverse) +library(reshape2) + +DT.m1 <- melt(data_hacettepePathology2, + id.vars = c("PMID"), + measure.vars = paste0("Affiliation", 1:6925)) + +DT.m2 <- DT.m1 %>% + filter(!is.na(value)) + +DT.m2$count <- 1 + +``` + + +```{r} +DT.m2$hacettepe <- + grepl( + pattern = ("[Hh]acettepe"), + x = + DT.m2$value + ) + +DT.m2$pathology <- + grepl( + pattern = ("[Pp]athology|[Pp]atoloji"), + x = + DT.m2$value + ) + +DT.m2$speach <- + grepl( + pattern = ("[Ss]peach|[Ss]peech"), + x = + DT.m2$value + ) + + +``` + +```{r} +DT.m3 <- DT.m2 %>% + filter(hacettepe == TRUE & pathology == TRUE) %>% + filter(speach==FALSE) + +``` + +```{r} +final_hacettepePathology <- data_hacettepePathology %>% + filter(PMID %in% DT.m3$PMID) %>% + select(-c("Affiliation")) %>% + left_join(DT.m3, by="PMID") %>% + select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate"), Affiliation = value) %>% + unique() %>% + mutate(PMIDLink = paste0("https://www.ncbi.nlm.nih.gov/pubmed/", PMID, "")) + +writexl::write_xlsx(final_hacettepePathology, here::here("data/final_hacettepePathology.xlsx")) + +``` + + +```{r} +cat(paste0(final_hacettepePathology$PMID, " OR ") +) +``` + + +``` +(hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])) NOT (speach[Affiliation] OR speech[Affiliation]) +``` + +``` +(Turkey[Affiliation] OR Turkiye[Affiliation]) AND ((pathology[Affiliation] OR patoloji[Affiliation]) NOT (speach[Affiliation] OR speech[Affiliation])) +``` + + +```{r} +library(tidyverse) +library(tidylog) +library(mmpipe) +final_hacettepePathology <- data_hacettepePathology %V>% + filter(PMID %in% DT.m3$PMID) %V>% + select(-c("Affiliation")) %V>% + left_join(DT.m3, by="PMID") %V>% + select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate"), Affiliation = value) %V>% + unique() %V>% + mutate(PMIDLink = paste0("https://www.ncbi.nlm.nih.gov/pubmed/", PMID, "")) + + +``` + diff --git a/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.nb.html b/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.nb.html index b9165c2..a1e5325 100644 --- a/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.nb.html +++ b/PathologyArticlesFromTurkeyComparedtoAllPublishedArticles.nb.html @@ -1801,7 +1801,7 @@

europepmc

ylab("Proportion of Pathology articles \n from Turkey in Europe PMC") -

+

@@ -1874,10 +1874,164 @@

Data retriveal from PubMed using EDirect

WOS data for VOSviewer

(AD=Turkey AND SU=Pathology) OR (CU=Turkey AND SU=Pathology)
 Indexes=SCI-EXPANDED, SSCI, A&HCI, CPCI-S, CPCI-SSH, BKCI-S, BKCI-SSH, ESCI Timespan=All years
+
+
+

Hacettepe[Affiliation] AND Pathology[Affiliation]

+ + + + + + +
+

read extracted data

+ + + +
library(readr)
+data_hacettepePathology <- read_delim(here::here("data/data_hacettepepathology.csv"), 
+    "|",
+    escape_double = FALSE,
+    col_names = FALSE, 
+    trim_ws = TRUE)
+ + +
Parsed with column specification:
+cols(
+  X1 = col_double(),
+  X2 = col_character(),
+  X3 = col_character(),
+  X4 = col_character(),
+  X5 = col_double(),
+  X6 = col_character()
+)
+4 parsing failures.
+row col  expected    actual                                                                         file
+210  -- 6 columns 8 columns '/Users/serdarbalciold/RepTemplates/pubmed/data/data_hacettepepathology.csv'
+242  -- 6 columns 8 columns '/Users/serdarbalciold/RepTemplates/pubmed/data/data_hacettepepathology.csv'
+243  -- 6 columns 8 columns '/Users/serdarbalciold/RepTemplates/pubmed/data/data_hacettepepathology.csv'
+281  -- 6 columns 8 columns '/Users/serdarbalciold/RepTemplates/pubmed/data/data_hacettepepathology.csv'
+ + +
# View(data_hacettepePathology)
+
+names(data_hacettepePathology) <- c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate", "Affiliation")
+
+ + + + + + +
library(tidyverse)
+library(stringr)
+str_count(string = data_hacettepePathology$Affiliation, pattern = ";") %>% 
+  max()
+ + +
[1] 6924
+ + + + + + + + +
library(tidyverse)
+library(reshape2)
+
+DT.m1 <- melt(data_hacettepePathology2,
+              id.vars = c("PMID"),
+              measure.vars = paste0("Affiliation", 1:6925))
+
+DT.m2 <- DT.m1 %>%
+  filter(!is.na(value))
+
+DT.m2$count <- 1
+
+ + + + + + +
DT.m2$hacettepe <-
+    grepl(
+        pattern = ("[Hh]acettepe"),
+        x =
+            DT.m2$value
+    )
+ + + + + + +
DT.m3 <- DT.m2 %>% 
+  filter(hacettepe == TRUE & pathology == TRUE) %>% 
+  filter(speach==FALSE)
+
+ + + + + +
final_hacettepePathology <- data_hacettepePathology %>% 
+  filter(PMID %in% DT.m3$PMID) %>% 
+  select(-c("Affiliation")) %>% 
+  left_join(DT.m3, by="PMID") %>% 
+  select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate")), Affiliation = value)
+
+ + +
Error: unexpected ',' in:
+"  left_join(DT.m3, by="PMID") %>% 
+  select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate")),"
+ + + + + + +
cat(paste0(final_hacettepePathology$PMID, " OR ")
+)
+
+ + +
30711942 OR  30711942 OR  30711942 OR  30614391 OR  30607566 OR  30553274 OR  30543088 OR  30420050 OR  30420050 OR  30378176 OR  30361868 OR  30356178 OR  30342481 OR  30337132 OR  30326153 OR  30264475 OR  30258736 OR  30222718 OR  30215711 OR  30213486 OR  30194012 OR  30177831 OR  30177831 OR  30177831 OR  30177831 OR  30151600 OR  30121298 OR  30066674 OR  30061063 OR  30039725 OR  29963264 OR  29933323 OR  29843558 OR  29758192 OR  29744787 OR  29737941 OR  29729229 OR  29631339 OR  29610498 OR  29565209 OR  29564756 OR  29557778 OR  29521057 OR  29481086 OR  29455242 OR  29433873 OR  29391599 OR  29391317 OR  29386221 OR  29368083 OR  29368083 OR  29342030 OR  29333888 OR  29307770 OR  29286564 OR  29278522 OR  29276876 OR  29221145 OR  29217050 OR  29183666 OR  29147924 OR  29147924 OR  29113255 OR  29107076 OR  29101765 OR  29071270 OR  28988523 OR  28957973 OR  28938499 OR  28885322 OR  28877062 OR  28872973 OR  28871709 OR  28843712 OR  28832323 OR  28832077 OR  28832074 OR  28786167 OR  28754454 OR  28705285 OR  28684169 OR  28645584 OR  28627959 OR  28616233 OR  28601298 OR  28597078 OR  28593113 OR  28576480 OR  28575990 OR  28566877 OR  28554554 OR  28549792 OR  28549792 OR  28488171 OR  28471040 OR  28452074 OR  28443589 OR  28333838 OR  28263489 OR  28263489 OR  28219585 OR  28216139 OR  28216139 OR  28203472 OR  28155970 OR  28155970 OR  28109637 OR  28083971 OR  29745124 OR  28028337 OR  27974811 OR  27932539 OR  27922519 OR  27909626 OR  27906844 OR  27896834 OR  27864098 OR  27857123 OR  27853495 OR  27810370 OR  27807490 OR  27561188 OR  27603550 OR  27513982 OR  27703380 OR  27699733 OR  27640103 OR  27640103 OR  27606145 OR  27575604 OR  27547915 OR  27520411 OR  27476657 OR  27448951 OR  27416885 OR  27409664 OR  27390585 OR  27366187 OR  27347166 OR  27303936 OR  27259049 OR  27216000 OR  27206703 OR  27180062 OR  27132540 OR  27129763 OR  27067808 OR  27062662 OR  27042238 OR  27026777 OR  27003050 OR  26997452 OR  26980028 OR  26970763 OR  26965579 OR  26945448 OR  26943384 OR  26872278 OR  26854080 OR  26848216 OR  26797858 OR  26797858 OR  26743593 OR  29090887 OR  29090884 OR  29090871 OR  28276221 OR  26681974 OR  26662466 OR  26584874 OR  26584697 OR  26578207 OR  26578207 OR  26575115 OR  26563115 OR  26550397 OR  26527231 OR  26519197 OR  26456966 OR  26449317 OR  26449317 OR  26449317 OR  26407049 OR  26397478 OR  26346511 OR  26341890 OR  26339344 OR  26332388 OR  26293571 OR  26242854 OR  26207004 OR  26100969 OR  26095595 OR  26090243 OR  26081979 OR  26081979 OR  26067811 OR  26064727 OR  26052757 OR  26045846 OR  25994764 OR  25906124 OR  25883712 OR  25842994 OR  25821721 OR  25811726 OR  25810266 OR  25769540 OR  25759781 OR  25755968 OR  25743721 OR  27708922 OR  25692090 OR  25667467 OR  25560609 OR  27047934 OR  25529806 OR  25498489 OR  25457509 OR  25378828 OR  25223322 OR  25218282 OR  25171023 OR  25110239 OR  25087613 OR  24977003 OR  24947701 OR  24913330 OR  24856141 OR  24840535 OR  24794787 OR  24794787 OR  24782301 OR  24777267 OR  24731921 OR  24718000 OR  24667046 OR  24585772 OR  24523789 OR  24505496 OR  24430434 OR  24385732 OR  24326152 OR  24285274 OR  24080633 OR  24022314 OR  24018817 OR  23998291 OR  23653827 OR  28509218 OR  23588333 OR  23551548 OR  23419599 OR  24592101 OR  23219110 OR  23153936 OR  23030256 OR  23011824 OR  23011823 OR  23011821 OR  22961375 OR  22316516 OR  22301705 OR  22158496 OR  21810125 OR  21665002 OR  21630194 OR  21496526 OR  21492232 OR  21469428 OR  21437995 OR  21074692 OR  21074691 OR  21069451 OR  20952300 OR  20952295 OR  20719821 OR  20674190 OR  20465615 OR  20418233 OR  20173504 OR  20060354 OR  19851201 OR  19468034 OR  19462235 OR  19403544 OR  19363472 OR  19232840 OR  19178738 OR  19130459 OR  19065380 OR  19024599 OR  19014058 OR  18844937 OR  18773281 OR  18446633 OR  18379707 OR  18374497 OR  18365589 OR  18246753 OR  18085395 OR  18066567 OR  17947476 OR  17926107 OR  17922596 OR  17619723 OR  17587245 OR  17573765 OR  17543474 OR  17451888 OR  17291234 OR  17130035 OR  17007443 OR  16912900 OR  16752009 OR  16489441 OR  16343208 OR  16328667 OR  16320561 OR  16194892 OR  16175081 OR  16021510 OR  16014115 OR  15998374 OR  15913445 OR  15802396 OR  15762048 OR  15670313 OR  15658132 OR  15623491 OR  15622249 OR  15456418 OR  15334737 OR  15249720 OR  15204955 OR  15073846 OR  15032077 OR  14692804 OR  14521262 OR  12911737 OR  12488986 OR  12464212 OR  12049830 OR  12007023 OR  11926913 OR  11925832 OR  11793117 OR  11699420 OR  11585325 OR  11568381 OR  11564220 OR  11462912 OR  11409483 OR  11263931 OR  11057782 OR  11053680 OR  10997737 OR  10985626 OR  10885604 OR  10828801 OR  10819111 OR  10699830 OR  10679036 OR  10671893 OR  10636586 OR  10508882 OR  10192575 OR  9863925 OR  9849847 OR  9821039 OR  9744734 OR  9732936 OR  9646237 OR  9641241 OR  9625858 OR  9181320 OR  9085813 OR  9152975 OR  8899473 OR  7768662 OR  11578422 OR  8191601 OR  8368909 OR  8372026 OR  8516224 OR  8444560 OR  8096638 OR  8419633 OR  17588038 OR  1813402 OR  2287298 OR  2283976 OR  2626097 OR
+ + + +
(hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])) NOT (speach[Affiliation] OR speech[Affiliation])
+
(Turkey[Affiliation] OR Turkiye[Affiliation]) AND ((pathology[Affiliation] OR patoloji[Affiliation]) NOT (speach[Affiliation] OR speech[Affiliation]))
+ + + +
final_hacettepePathology <- data_hacettepePathology %V>% 
+  filter(PMID %in% DT.m3$PMID) %V>% 
+  select(-c("Affiliation")) %V>%
+  left_join(DT.m3, by="PMID") %V>% 
+  select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate"), Affiliation = value) %V>%
+  unique() %V>% 
+  mutate(PMIDLink = paste0("https://www.ncbi.nlm.nih.gov/pubmed/", PMID, ""))
+
+ + +
filter: removed 241 rows (39%) 
+select: dropped one variable (Affiliation) 
+left_join: added 98 rows and added 6 columns (variable, value, count, hacettepe, pathology, …) 
+select: dropped 6 variables (variable, value, count, hacettepe, pathology, …) 
+mutate: new variable 'PMIDLink' with 374 unique values and 0% NA
+ + + + +
-
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
+
---
title: "Pathology Articles From Turkey Compared to All Published Articles"
output: html_notebook
---

# europepmc

https://cran.r-project.org/web/packages/europepmc/index.html

https://cran.r-project.org/web/packages/europepmc/vignettes/evergreenreviewgraphs.html


```{r}
library(europepmc)
```


```{r}
articlesPerTotalArticles <- europepmc::epmc_hits_trend(query = "(AFF:'Turkey') AND ((AFF:'pathology') OR (AFF:'Pathology'))", period = 1980:2017)

articlesPerTotalArticles
```



A trend graph of articles of #pathologist from #Turkey derived from Europe PMC #RStats #europepmc #evergreenreviewgraph #pathology  #research #bibliography


```{r}
library(ggplot2)
ggplot(articlesPerTotalArticles, aes(year, query_hits / all_hits)) + 
  geom_point() + 
  geom_line() +
  xlab("Year published") + 
  ylab("Proportion of Pathology articles \n from Turkey in Europe PMC")
```


---

# PubMed 

## Data retriveal from PubMed using EDirect 

Article PMID downloaded as `txt`.

```{r Search PubMed download PMID, eval=FALSE, include=FALSE}
myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
    myTerm,
    "esearch -db pubmed -query \"(pathology[Affiliation] OR patoloji[Affiliation]) AND (Turkey[Affiliation] OR Türkiye[Affiliation])\" -datetype PDAT -mindate 1800 -maxdate 3000 | \ efetch -format uid > data/pubmed_result_TurkPath_uid.txt \n"
)
Sys.sleep(1)
repeat {
    Sys.sleep(0.1)
    if (rstudioapi::terminalBusy(myTerm) == FALSE) {
        print("Code Executed")
        break
    }
}
```


---


```{r Search local PubMed with downloaded PMID extract data as xml, eval=FALSE, include=FALSE}
myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
    myTerm,
    "cat data/pubmed_result_TurkPath_uid.txt | \ fetch-pubmed -path /Volumes/Agu2018/PubMed > data/pubmed_result_TurkPath.xml \n"
)
Sys.sleep(1)
repeat {
    Sys.sleep(0.1)
    if (rstudioapi::terminalBusy(myTerm) == FALSE) {
        print("Code Executed")
        break
    }
}
```




---



```{r extract doi from xml, message=FALSE, warning=FALSE}
myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
myTerm,
"xtract -input data/pubmed_result_TurkPath.xml -pattern PubmedArticle -block ArticleId -if ArticleId@IdType -equals doi -element ArticleId > data/pubmed_result_TurkPath_doi.txt \n"
)
Sys.sleep(1)
repeat {
Sys.sleep(0.1)
if (rstudioapi::terminalBusy(myTerm) == FALSE) {
print("Code Executed")
break
}
}
```


```{r}
library(tidyverse)
pubmed_result_TurkPath_doi <- read.delim("data/pubmed_result_TurkPath_doi.txt", header = FALSE)
```


```{r}
pubmed_result_TurkPath_doi$V1[grep("^10.", pubmed_result_TurkPath_doi$V1)]

pubmed_result_TurkPath_doi$V2 <- grepl(
  pattern = "^10.",
  x = pubmed_result_TurkPath_doi$V1
)

pubmed_result_TurkPath_doi2 <- pubmed_result_TurkPath_doi %>% 
  filter(pubmed_result_TurkPath_doi$V2 == TRUE) %>% 
  select(V1)

write_csv(pubmed_result_TurkPath_doi2, "data/pubmed_result_TurkPath_doi2.txt", col_names = FALSE)


```


---

# WOS data for VOSviewer


```
(AD=Turkey AND SU=Pathology) OR (CU=Turkey AND SU=Pathology)
Indexes=SCI-EXPANDED, SSCI, A&HCI, CPCI-S, CPCI-SSH, BKCI-S, BKCI-SSH, ESCI Timespan=All years
```


# Hacettepe[Affiliation] AND Pathology[Affiliation] 


```{r Search PubMed download all articles uid, eval=FALSE, include=FALSE}
myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
    myTerm,
    "esearch -db pubmed -query \"hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])\" -datetype PDAT -mindate 1800 -maxdate 3000 | \ efetch -format uid > data/pubmed_result_hacettepe_pathology_uid.txt \n"
)
Sys.sleep(1)
repeat {
    Sys.sleep(0.1)
    if (rstudioapi::terminalBusy(myTerm) == FALSE) {
        print("Code Executed")
        break
    }
}

file.info(here::here("data/pubmed_result_hacettepe_pathology_uid.txt"))$ctime
```


```{r Search PubMed download all articles xml, eval=FALSE, include=FALSE}
myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
    myTerm,
    "esearch -db pubmed -query \"hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])\" -datetype PDAT -mindate 1800 -maxdate 3000 | \ efetch -format xml > data/pubmed_result_hacettepe_pathology_uid.xml \n"
)
Sys.sleep(1)
repeat {
    Sys.sleep(0.1)
    if (rstudioapi::terminalBusy(myTerm) == FALSE) {
        print("Code Executed")
        break
    }
}

file.info(here::here("data/pubmed_result_hacettepe_pathology_uid.xml"))$ctime
```




```{r extract if pathology and hacettepe in same affiliation, eval=FALSE, include=FALSE}

myTerm <- rstudioapi::terminalCreate(show = FALSE)
rstudioapi::terminalSend(
myTerm,
"xtract -input data/pubmed_result_hacettepe_pathology_uid.xml -pattern PubmedArticle -tab \"|\" -sep \";\" -def \"NA\" -element MedlineCitation/PMID ArticleTitle Journal/ISSN ISOAbbreviation PubDate/Year Affiliation> data/data_hacettepepathology.csv \n"
)
Sys.sleep(1)
repeat {
Sys.sleep(0.1)
if (rstudioapi::terminalBusy(myTerm) == FALSE) {
print("Code Executed")
break
}
}

```


## read extracted data


```{r read data}
library(readr)
data_hacettepePathology <- read_delim(here::here("data/data_hacettepepathology.csv"), 
    "|",
    escape_double = FALSE,
    col_names = FALSE, 
    trim_ws = TRUE)
# View(data_hacettepePathology)

names(data_hacettepePathology) <- c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate", "Affiliation")

```


```{r separate affiliations}
library(tidyverse)
library(stringr)
str_count(string = data_hacettepePathology$Affiliation, pattern = ";") %>% 
  max()

```


```{r plain affiliation characters, include=FALSE}

# to.plain <- function(s) {
#         # 1 character substitutions
#     old1 <- "çğşıüöÇĞŞİÖÜ"
#     new1 <- "cgsiuocgsiou"
#     s1 <- chartr(old1, new1, s)
#     # 2 character substitutions
#     old2 <- c("œ", "ß", "æ", "ø")
#     new2 <- c("oe", "ss", "ae", "oe")
#     s2 <- s1
#     for(i in seq_along(old2)) s2 <- gsub(old2[i], new2[i], s2, fixed = TRUE)
#     s2
# }

data_hacettepePathology2 <- data_hacettepePathology %>% 
  select(PMID, Affiliation)


# [[:alpha:]]



# data_hacettepePathology2$Affiliation <- data_hacettepePathology2$Affiliation %>%
#     tolower() %>%
#     to.plain()


data_hacettepePathology2 <-  data_hacettepePathology2 %>% 
  separate(col = "Affiliation", sep = ";", into = paste0("Affiliation", 1:6925))


```




```{r}
library(tidyverse)
library(reshape2)

DT.m1 <- melt(data_hacettepePathology2,
              id.vars = c("PMID"),
              measure.vars = paste0("Affiliation", 1:6925))

DT.m2 <- DT.m1 %>%
  filter(!is.na(value))

DT.m2$count <- 1

```


```{r}
DT.m2$hacettepe <-
    grepl(
        pattern = ("[Hh]acettepe"),
        x =
            DT.m2$value
    )

DT.m2$pathology <-
    grepl(
        pattern = ("[Pp]athology|[Pp]atoloji"),
        x =
            DT.m2$value
    )

DT.m2$speach <-
    grepl(
        pattern = ("[Ss]peach|[Ss]peech"),
        x =
            DT.m2$value
    )


```

```{r}
DT.m3 <- DT.m2 %>% 
  filter(hacettepe == TRUE & pathology == TRUE) %>% 
  filter(speach==FALSE)

```

```{r}
final_hacettepePathology <- data_hacettepePathology %>% 
  filter(PMID %in% DT.m3$PMID) %>% 
  select(-c("Affiliation")) %>% 
  left_join(DT.m3, by="PMID") %>% 
  select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate"), Affiliation = value) %>% 
  unique() %>% 
  mutate(PMIDLink = paste0("https://www.ncbi.nlm.nih.gov/pubmed/", PMID, ""))

writexl::write_xlsx(final_hacettepePathology, here::here("data/final_hacettepePathology.xlsx"))

```


```{r}
cat(paste0(final_hacettepePathology$PMID, " OR ")
)
```


```
(hacettepe[Affiliation] AND (pathology[Affiliation] OR patoloji[Affiliation])) NOT (speach[Affiliation] OR speech[Affiliation]) 
```

```
(Turkey[Affiliation] OR Turkiye[Affiliation]) AND ((pathology[Affiliation] OR patoloji[Affiliation]) NOT (speach[Affiliation] OR speech[Affiliation]))
```


```{r}
library(tidyverse)
library(tidylog)
library(mmpipe)
final_hacettepePathology <- data_hacettepePathology %V>% 
  filter(PMID %in% DT.m3$PMID) %V>% 
  select(-c("Affiliation")) %V>%
  left_join(DT.m3, by="PMID") %V>% 
  select(c("PMID", "ArticleTitle", "ISSN", "ISOAbbreviation", "PubDate"), Affiliation = value) %V>%
  unique() %V>% 
  mutate(PMIDLink = paste0("https://www.ncbi.nlm.nih.gov/pubmed/", PMID, ""))


```



diff --git a/Sources.Rmd b/Sources.Rmd index 6563058..532d77f 100644 --- a/Sources.Rmd +++ b/Sources.Rmd @@ -200,6 +200,8 @@ caffeinate https://labs.cognitive.microsoft.com/en-us/project-academic-knowledge +https://academic.microsoft.com/author/2608586067/publication/search?q=Serdar%20Balci + ## Scopus https://www.scopus.com/sources @@ -249,6 +251,28 @@ https://semsci.github.io/SemSci2018/papers/1/bcite-semsci2018.html https://github.com/opencitations/bcite +## Open Knowledge Maps + +Open Knowledge Maps (2019). Overview of research on (pathology[affiliation] or patoloji[affiliation]) and (turkey[affiliation] or türkiye[affiliation]). Retrieved from https://openknowledgemaps.org/map/e4dbf6c89015e402d6d7d560ab79e17a/ [30 Mar 2019]. + + +https://openknowledgemaps.org/index + + + +## iris.ai + +https://the.iris.ai/map/02f89d24-0415-43ab-878a-853ec17c5a59 + +## lens.org + +https://www.lens.org/lens/scholar/search/results?dateFilterField=year_published&filterMap=%7B%7D&orcids=0000-0002-7852-3851&orderBy=%2Bpublished&preview=true&previewType=SCHOLAR_ANALYSIS®exEnabled=false + +https://www.lens.org/lens/scholar/search/results?q=(author.affiliation.name:%20%22pathology%22%20%20OR%20author.affiliation.name:%20%22patoloji%22)%20%20AND%20(author.affiliation.name:%20%22Turkey%22%20%20OR%20author.affiliation.name:%20%22T%C3%BCrkiye%22) + +https://www.lens.org/lens/scholar/search/analysis?q=(author.affiliation.name:%20%22neurosurgery%22%20%20OR%20author.affiliation.name:%20%22sport%22%20)%20AND%20(abstract:%20%22sport%22%20%20OR%20title:%20%22sport%22)&page=0&limit=10&orderBy=%2Bscore&dateFilterField=year_published&preview=false®exEnabled=false + + --- # Feedback diff --git a/Sources.nb.html b/Sources.nb.html index 118ac55..7b96d53 100644 --- a/Sources.nb.html +++ b/Sources.nb.html @@ -11,7 +11,7 @@ - + Bibliographic Studies @@ -2551,7 +2551,7 @@ var currentIndex = 1; // select all R code blocks - var rCodeBlocks = $('pre.r, pre.python, pre.bash, pre.sql, pre.cpp, pre.stan'); + var rCodeBlocks = $('pre.r, pre.python, pre.bash, pre.sql, pre.cpp, pre.stan, pre.julia'); rCodeBlocks.each(function() { // create a collapsable div to wrap the code in @@ -2640,9 +2640,7 @@ - - -
- + + + + + + + +
+ +
@@ -2893,9 +2899,9 @@

Bibliographic Studies

-

Sources Used For Analysis

-

Serdar Balcı, MD, Pathologist

-

2019-01-23

+

Sources Used For Analysis

+

Serdar Balcı, MD, Pathologist

+

2019-03-30

@@ -3006,6 +3012,7 @@

2.3 Semantic Scholar

+
+

2.11 Open Knowledge Maps

+

Open Knowledge Maps (2019). Overview of research on (pathology[affiliation] or patoloji[affiliation]) and (turkey[affiliation] or türkiye[affiliation]). Retrieved from https://openknowledgemaps.org/map/e4dbf6c89015e402d6d7d560ab79e17a/ [30 Mar 2019].

+

https://openknowledgemaps.org/index

+
+ +

3 Feedback

Serdar Balcı, MD, Pathologist would like to hear your feedback: https://goo.gl/forms/YjGZ5DHgtPlR1RnB3

-

This document will be continiously updated and the last update was on 2019-01-23.

+

This document will be continiously updated and the last update was on 2019-03-30.

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + + + + + + + +

Search methods:

+

Journal:
+Modern Pathology
+Laboratory Investigation

+

Conference:
+USCAP
+Annual Meeting of the United-States-and-Canadian-Academy-of-Pathology

+

From pdf ??

+

+

+
+ + + +
install.packages("pdftools")
+ + +
Installing package into ‘/Users/serdarbalciold/Library/R/3.5/library’
+(as ‘lib’ is unspecified)
+also installing the dependency ‘qpdf’
+
+trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/qpdf_1.1.tgz'
+Content type 'application/x-gzip' length 3730250 bytes (3.6 MB)
+==================================================
+downloaded 3.6 MB
+
+trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.5/pdftools_2.2.tgz'
+Content type 'application/x-gzip' length 6580512 bytes (6.3 MB)
+==================================================
+downloaded 6.3 MB
+ + +

+The downloaded binary packages are in
+    /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFaS0NC/downloaded_packages
+ + + + + + +
# download.file("https://github.com/Huitziii/crispy-pdf/raw/master/71_PV.62.pdf",
+              # "./71_PV.62.pdf")
+text <- pdf_text("data/eurospine/2014/eurospine-2014-2014qf.pdf")
+
+ + +
Error in pdf_text("data/eurospine/2014/eurospine-2014-2014qf.pdf") : 
+  could not find function "pdf_text"
+ + + + + + + +
+ + + +
library(tidyverse)
+library(officer)
+ + + + + + + + + + +
+ +
+ + + + + + +
+ +
+ + + + + + +
lyon2014$content_type
+
+ + +
<content_type>
+  Public:
+    add_ext: function (extension, type) 
+    add_override: function (value) 
+    add_slide: function (partname) 
+    clone: function (deep = FALSE) 
+    initialize: function (package_dir) 
+    remove_slide: function (partname) 
+    save: function () 
+  Private:
+    default: application/vnd.openxmlformats-package.relationships+xml ...
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    override: application/vnd.openxmlformats-officedocument.wordproces ...
+ + + + + + +
+ +
+ + + + + + +
glimpse(lyon2014)
+
+ + +
List of 1308
+ $ package_dir   : chr "/var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFaS0NC/file138a4c66125c"
+ $ doc_properties:Classes 'core_properties', 'R6' <core_properties>
+  Public:
+    clone: function (deep = FALSE) 
+    get_data: function () 
+    initialize: function (package_dir) 
+    save: function () 
+    set_created: function (value) 
+    set_creator: function (value) 
+    set_description: function (value) 
+    set_keywords: function (value) 
+    set_last_modified: function (value) 
+    set_modified_by: function (value) 
+    set_subject: function (value) 
+    set_title: function (value) 
+  Private:
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    set_core_property: function (tag, ns, value, attrs = NULL)  
+ $ content_type  :Classes 'content_type', 'R6' <content_type>
+  Public:
+    add_ext: function (extension, type) 
+    add_override: function (value) 
+    add_slide: function (partname) 
+    clone: function (deep = FALSE) 
+    initialize: function (package_dir) 
+    remove_slide: function (partname) 
+    save: function () 
+  Private:
+    default: application/vnd.openxmlformats-package.relationships+xml ...
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    override: application/vnd.openxmlformats-officedocument.wordproces ... 
+ $ doc_obj       :Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:document/w:body
+    cursor: /w:document/w:body/*[1307]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+ $ styles        :'data.frame': 4 obs. of  5 variables:
+  ..$ style_type: chr [1:4] "paragraph" "character" "table" "numbering"
+  ..$ style_id  : chr [1:4] "Normal" "DefaultParagraphFont" "TableNormal" "NoList"
+  ..$ style_name: chr [1:4] "Normal" "Default Paragraph Font" "Normal Table" "No List"
+  ..$ is_custom : logi [1:4] FALSE FALSE FALSE FALSE
+  ..$ is_default: logi [1:4] TRUE TRUE TRUE TRUE
+ $ headers       :List of 2
+  ..$ header1.xml:Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:hdr
+    cursor: /w:hdr/*[1]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+  ..$ header2.xml:Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:hdr
+    cursor: /w:hdr/*[1]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+ $ footers       :List of 2
+  ..$ footer1.xml:Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:ftr
+    cursor: /w:ftr/*[1]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+  ..$ footer2.xml:Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:ftr
+    cursor: /w:ftr/*[1]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+ $ footnotes     :Classes 'docx_part', 'openxml_document', 'R6' <docx_part>
+  Inherits from: <openxml_document>
+  Public:
+    clone: function (deep = FALSE) 
+    cursor_backward: function () 
+    cursor_begin: function () 
+    cursor_bookmark: function (id) 
+    cursor_end: function () 
+    cursor_forward: function () 
+    cursor_reach: function (keyword) 
+    cursor_replace_first_img: function (id, src, width, height) 
+    cursor_replace_first_text: function (id, text) 
+    dir_name: function () 
+    docx_show_chunk: function () 
+    feed: function (file) 
+    file_name: function () 
+    get: function () 
+    get_at_cursor: function () 
+    has_bookmark: function (id) 
+    initialize: function (path, main_file, cursor, body_xpath) 
+    length: function () 
+    name: function () 
+    rel_df: function () 
+    relationship: function () 
+    remove: function () 
+    replace_all_text: function (oldValue, newValue, onlyAtCursor = TRUE, warn = TRUE, 
+    save: function () 
+    set_cursor: function (cursor) 
+  Private:
+    body_xpath: /w:footnotes
+    cursor: /w:footnotes/*[last()]
+    doc: xml_document, xml_node
+    filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    package_dir: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ...
+    reldir: word
+    rels_doc: relationship, R6
+    rels_filename: /var/folders/76/rq_s_23s7fd5r8hqrbg8rmnc0000gp/T//RtmpFa ... 
+ $ default_styles:List of 4
+  ..$ paragraph: chr "Normal"
+  ..$ character: chr "Default Paragraph Font"
+  ..$ table    : chr "Normal Table"
+  ..$ numbering: chr "No List"
+ $ sect_dim      :List of 3
+  ..$ page     : Named int [1:2] 11920 15820
+  .. ..- attr(*, "names")= chr [1:2] "width" "height"
+  ..$ landscape: logi FALSE
+  ..$ margins  : Named int [1:4] 540 1080 900 900
+  .. ..- attr(*, "names")= chr [1:4] "top" "bottom" "left" "right"
+ $ NA:
+ + +
Error in object[[i]] : subscript out of bounds
+ + + + + +
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
+ + + +
+ + + + + + + + diff --git a/Vosviewer.Rmd b/Vosviewer.Rmd new file mode 100644 index 0000000..f201b90 --- /dev/null +++ b/Vosviewer.Rmd @@ -0,0 +1,20 @@ +--- +title: "Vosviewer" +output: html_notebook +--- + + + +--- + +# VOSVIEWER + +## VOSVIEWER TUTORIALS Documentation for Vosviewer in multiple languages + +https://github.com/seinecle/Vosviewer-tutorials + +https://seinecle.github.io/vosviewer-tutorials/ + + +--- + diff --git a/Vosviewer.nb.html b/Vosviewer.nb.html new file mode 100644 index 0000000..04e750f --- /dev/null +++ b/Vosviewer.nb.html @@ -0,0 +1,1818 @@ + + + + + + + + + + + + + +Vosviewer + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + +
+
+

VOSVIEWER

+
+

VOSVIEWER TUTORIALS Documentation for Vosviewer in multiple languages

+

https://github.com/seinecle/Vosviewer-tutorials

+

https://seinecle.github.io/vosviewer-tutorials/

+
+ +
+
+ +
LS0tCnRpdGxlOiAiVm9zdmlld2VyIgpvdXRwdXQ6IGh0bWxfbm90ZWJvb2sKLS0tCgoKCi0tLQoKIyBWT1NWSUVXRVIKCiMjIFZPU1ZJRVdFUiBUVVRPUklBTFMgRG9jdW1lbnRhdGlvbiBmb3IgVm9zdmlld2VyIGluIG11bHRpcGxlIGxhbmd1YWdlcwoKaHR0cHM6Ly9naXRodWIuY29tL3NlaW5lY2xlL1Zvc3ZpZXdlci10dXRvcmlhbHMKCmh0dHBzOi8vc2VpbmVjbGUuZ2l0aHViLmlvL3Zvc3ZpZXdlci10dXRvcmlhbHMvCgoKLS0tCgo=
+ + + +
+ + + + + + + + diff --git a/WOS.Rmd b/WOS.Rmd index eaffccb..7df7f4c 100644 --- a/WOS.Rmd +++ b/WOS.Rmd @@ -20,12 +20,32 @@ http://www.bibliometrix.org/ +https://cran.r-project.org/web/packages/bibliometrix/bibliometrix.pdf + +https://www.rdocumentation.org/packages/bibliometrix/versions/1.8/topics/convert2df + + --- +``` +install.packages(“bibliometrix”, dependencies=TRUE) ### installs bibliometrix package and dependencies + +library(bibliometrix) ### load bibliometrix package +## To cite bibliometrix in publications, please use: +## +## Aria, M. & Cuccurullo, C. (2017) bibliometrix: An R-tool for comprehensive science mapping analysis, Journal of Informetrics, 11(4), pp 959-975, Elsevier. +## +## +## http:\\www.bibliometrix.org +## +## +## To start with the shiny web-interface, please digit: +## biblioshiny() +``` + +--- -https://cran.r-project.org/web/packages/bibliometrix/bibliometrix.pdf -https://www.rdocumentation.org/packages/bibliometrix/versions/1.8/topics/convert2df ```{r} @@ -53,13 +73,42 @@ biblio_df_df <- convert2df(file = biblio, dbsource = "isi", format = "bibtex") ```{r} -biblio1 <- readLines("data/WOS-Turkey-PathologyField/savedrecs-1-500.txt") +# biblio1 <- readLines("data/WOS-Turkey-PathologyField/savedrecs-1-500.txt") # biblio_df1 <- convert2df(file = biblio1, dbsource = "isi", format = "plaintext") -biblio_df1 <- isi2df(D = biblio1) +# biblio_df1 <- isi2df(D = biblio1) + +``` ``` +Error in seq.default(iStart, iStop) : 'from' must be a finite number +This error is due to importing tab seperated or bibtex data instead of plaintext data. +For future download bibtex, plaintext and tab seperated file +``` + +```{r} +saveRDS(biblio_df_df, "data/WOS-Turkey-PathologyField/savedrecs-1-500.rds") +``` + + +```{r} +results <- biblioAnalysis(biblio_df_df, sep = ";") +results +``` + + +```{r eval=FALSE, include=FALSE} +S <- summary(object = results, k = 10, pause = FALSE) +``` + + + + +```{r} +plot(x = results, k = 10, pause = FALSE) +``` + - readFiles: Load a sequence of ISI or SCOPUS Export files into a large... diff --git a/WOS.nb.html b/WOS.nb.html index 783aa12..8c9891f 100644 --- a/WOS.nb.html +++ b/WOS.nb.html @@ -1769,38 +1769,1528 @@

bibliometrix

http://www.bibliometrix.org/

-

https://cran.r-project.org/web/packages/bibliometrix/bibliometrix.pdf

https://www.rdocumentation.org/packages/bibliometrix/versions/1.8/topics/convert2df

+
+
install.packages(“bibliometrix”, dependencies=TRUE) ### installs bibliometrix package and dependencies
+
+library(bibliometrix)   ### load bibliometrix package
+## To cite bibliometrix in publications, please use:
+## 
+## Aria, M. & Cuccurullo, C. (2017) bibliometrix: An R-tool for comprehensive science mapping analysis, Journal of Informetrics, 11(4), pp 959-975, Elsevier.
+##                         
+## 
+## http:\\www.bibliometrix.org
+## 
+##                         
+## To start with the shiny web-interface, please digit:
+## biblioshiny()
+
- -
biblio_df_df <- convert2df(file = biblio, dbsource = "isi", format = "bibtex")
-
- - -

-Converting your isi collection into a bibliographic dataframe
+
+
# NOT RUN {
+# An ISI or SCOPUS Export file can be read using \code{\link{readLines}} function:
 
-Articles extracted   99 
-Done!
+# largechar <- readLines('filename.txt')
 
+# filename.txt is an ISI or SCOPUS Export file in plain text or bibtex format.
+# The file have to be saved without Byte order mark (U+FEFF) at the beginning
+# and EoF code at the end of file.
+# The original file (exported by ISI or SCOPUS search web site) can be modified
+# using an advanced text editor like Notepad++ or Emacs.
 
-Generating affiliation field tag AU_UN from C1:  Done!

-
+# install.packages("bibliometrix", dependencies = TRUE)
+
+library(bibliometrix)
+
+biblio <- readLines('http://www.bibliometrix.org/datasets/bibliometrics_articles.txt')
+
+biblio_df_df <- convert2df(file = biblio, dbsource = "isi", format = "bibtex")
+
+# }
+ + + + + + +
# biblio1 <- readLines("data/WOS-Turkey-PathologyField/savedrecs-1-500.txt")
+
+# biblio_df1 <- convert2df(file = biblio1, dbsource = "isi", format = "plaintext")
+
+# biblio_df1 <- isi2df(D = biblio1)
+
+ + + +
Error in seq.default(iStart, iStop) : 'from' must be a finite number
+This error is due to importing tab seperated or bibtex data instead of plaintext data.
+For future download bibtex, plaintext and tab seperated file
+ + + +
saveRDS(biblio_df_df, "data/WOS-Turkey-PathologyField/savedrecs-1-500.rds")
+ - -
biblio_df1 <- isi2df(D = biblio1)
+
+
results
 

 
-
-
Error in seq.default(iStart, iStop) : 'from' must be a finite number

+
+
$Articles
+[1] 50
+
+$Authors
+AU
+                                MCCRORY P 
+                                       12 
+                            GUSKIEWICZ KM 
+                                       10 
+                              MEEUWISSE W 
+                                        9 
+                               COLLINS MW 
+                                        8 
+                                 DVORAK J 
+                                        8 
+                                LOVELL MR 
+                                        8 
+                                  AUBRY M 
+                                        6 
+                                 CANTU RC 
+                                        6 
+                               JOHNSTON K 
+                                        6 
+                              MARSHALL SW 
+                                        6 
+                                 MCCREA M 
+                                        6 
+                                  CANTU R 
+                                        5 
+                               IVERSON GL 
+                                        5 
+                              JOHNSTON KM 
+                                        5 
+                               MAKDISSI M 
+                                        5 
+                                MEEHAN WP 
+                                        4 
+                                 BAILES J 
+                                        3 
+                                 COLLIE A 
+                                        3 
+                                 ELBIN RJ 
+                                        3 
+                                 MAROON J 
+                                        3 
+                                MAROON JC 
+                                        3 
+                                 MARUFF P 
+                                        3 
+                             MEEUWISSE WH 
+                                        3 
+                               MIHALIK JP 
+                                        3 
+                                 MOLLOY M 
+                                        3 
+                                 NORWIG J 
+                                        3 
+                               RANDOLPH C 
+                                        3 
+                                BENNELL K 
+                                        2 
+                                BENSON BW 
+                                        2 
+                               COVASSIN T 
+                                        2 
+                                  DAVIS G 
+                                        2 
+                                 EMERY CA 
+                                        2 
+                                  FIELD M 
+                                        2 
+                                  GIZA CC 
+                                        2 
+                           GRAF-BAUMANN T 
+                                        2 
+                              HAMILTON GM 
+                                        2 
+                                JORDAN BD 
+                                        2 
+                                  KELLY J 
+                                        2 
+                                 KELLY JP 
+                                        2 
+                                KONTOS AP 
+                                        2 
+                               LACROIX VJ 
+                                        2 
+                                LECLERC S 
+                                        2 
+                                 LOVELL M 
+                                        2 
+                                  MUCHA A 
+                                        2 
+                                 PODELL K 
+                                        2 
+                              SCHAMASCH P 
+                                        2 
+                         ABDOLMOHAMMADI B 
+                                        1 
+                                AGLIPAY M 
+                                        1 
+                                   AHN KW 
+                                        1 
+                              ALMQUIST JL 
+                                        1 
+                                ALOSCO ML 
+                                        1 
+                                 ALTAYE M 
+                                        1 
+                               ALVAREZ VE 
+                                        1 
+                               ANDERSON P 
+                                        1 
+                               ANDERSON V 
+                                        1 
+                          BARKHOUDARIAN G 
+                                        1 
+                                 BARLOW K 
+                                        1 
+                                   BARR W 
+                                        1 
+                                  BARR WB 
+                                        1 
+                              BARROWMAN N 
+                                        1 
+                                 BAUGH CM 
+                                        1 
+                              BAZARIAN JJ 
+                                        1 
+                             BEAUCHAMP MH 
+                                        1 
+                                   BEER D 
+                                        1 
+                                  BELL DR 
+                                        1 
+                                  BLYTH B 
+                                        1 
+                                BORRINO A 
+                                        1 
+                                 BOUTIS K 
+                                        1 
+                                BROGLIO S 
+                                        1 
+                              BROLINSON G 
+                                        1 
+                                BROOKS BL 
+                                        1 
+                                 BROWN NJ 
+                                        1 
+                                BRUKNER P 
+                                        1 
+                                  BURNS E 
+                                        1 
+                                   BUSH A 
+                                        1 
+                                CASSIDY D 
+                                        1 
+                            CASTELLANI RJ 
+                                        1 
+                               CASWELL SV 
+                                        1 
+                                 CECIL KM 
+                                        1 
+                              CHAISSON CE 
+                                        1 
+                                CIOCCA MF 
+                                        1 
+                                COLLINS M 
+                                        1 
+                              COMSTOCK RD 
+                                        1 
+                               CORMIER KA 
+                                        1 
+                                  CRAIG W 
+                                        1 
+                               CROWELL DH 
+                                        1 
+                            D'HEMECOURT P 
+                                        1 
+                             DANESHVAR DH 
+                                        1 
+                                  DARBY D 
+                                        1 
+                                 DARBY DG 
+                                        1 
+                                 DAVIS GA 
+                                        1 
+                               DELANEY JS 
+                                        1 
+                               DELANEY TS 
+                                        1 
+                               DEMATTEO C 
+                                        1 
+                                DEWOLF RM 
+                                        1 
+                                  DICK RW 
+                                        1 
+                                DIETTER D 
+                                        1 
+                             DUBROVSKY AS 
+                                        1 
+                                   DUMA S 
+                                        1 
+                                  DUNN RE 
+                                        1 
+                            ECHEMENDIA RJ 
+                                        1 
+                             ELLENBOGEN R 
+                                        1 
+                                  EMERY C 
+                                        1 
+                            ENGEBRETSEN L 
+                                        1 
+                                FARION KJ 
+                                        1 
+                                 FARLEY C 
+                                        1 
+                      FEDDERMANN-DEMONT N 
+                                        1 
+                              FREEDMAN SB 
+                                        1 
+                                FURMAN JM 
+                                        1 
+                                 GAGNON I 
+                                        1 
+                               GARRETT WE 
+                                        1 
+                                  GIBBS N 
+                                        1 
+                                  GIOIA G 
+                                        1 
+                                GOFORTH M 
+                                        1 
+                             GOLDSTEIN LE 
+                                        1 
+                                GOSTINE D 
+                                        1 
+                                 GOULET C 
+                                        1 
+                                 GRAVEL J 
+                                        1 
+                               GRINDEL SH 
+                                        1 
+                                 GROOL AM 
+                                        1 
+                             GUSKIEWICZ K 
+                                        1 
+                                 HAGEL BE 
+                                        1 
+                               HAMMEKE TA 
+                                        1 
+                               HARDING HP 
+                                        1 
+                                 HARRIS W 
+                                        1 
+                               HARTL ATCR 
+                                        1 
+                                HERRING S 
+                                        1 
+                                HINTON RY 
+                                        1 
+                                HOOKER DN 
+                                        1 
+                              HOSHIZAKI B 
+                                        1 
+                                 HOVDA DA 
+                                        1 
+                                 HUBER BR 
+                                        1 
+                                    IDE T 
+                                        1 
+                                  KAMIL Y 
+                                        1 
+                                   KANG J 
+                                        1 
+                                  KATZ DI 
+                                        1 
+                              KEIGHTLEY M 
+                                        1 
+                               KESSELS AG 
+                                        1 
+                               KIERNAN PT 
+                                        1 
+                                KISSICK J 
+                                        1 
+                                KLASSEN T 
+                                        1 
+                                 KONTOS A 
+                                        1 
+                                 KOWALL N 
+                                        1 
+                               KUBILUS CA 
+                                        1 
+                                KUTCHER J 
+                                        1 
+                               LABELLA CR 
+                                        1 
+                                   LAU BC 
+                                        1 
+                                  LEACH J 
+                                        1 
+                                 LEDDY JJ 
+                                        1 
+                                 LEZAK MD 
+                                        1 
+                               LINCOLN AE 
+                                        1 
+                               MADDOCKS D 
+                                        1 
+                                MANLEY GT 
+                                        1 
+                                MANNIX RC 
+                                        1 
+                              MARCHETTI G 
+                                        1 
+                                MARTIN BM 
+                                        1 
+                               MATSER EJT 
+                                        1 
+                               MATTHEWS A 
+                                        1 
+                               MAUGANS TA 
+                                        1 
+                            MCALLISTER JR 
+                                        1 
+                               MCCLEAN MD 
+                                        1 
+                               MCCRORY PR 
+                                        1 
+                               MCGAHERN C 
+                                        1 
+                                 MCHALE L 
+                                        1 
+                                MCKEAG DB 
+                                        1 
+                                 MCKEE AC 
+                                        1 
+                                    MEZ J 
+                                        1 
+                               MIHALIK JR 
+                                        1 
+                          MIKROGIANAKIS A 
+                                        1 
+                               MOHTADI NG 
+                                        1 
+                            MONTENIGRO PH 
+                                        1 
+                                 MURPHY L 
+                                        1 
+                               NAGAHIRO S 
+                                        1 
+                         NETTEL-AGUIRRE A 
+                                        1 
+                                NORRIS JB 
+                                        1 
+                              NOWINSKI CJ 
+                                        1 
+                               O'BRIEN MJ 
+                                        1 
+                                OLIARO SM 
+                                        1 
+                                 ONATE JA 
+                                        1 
+                                OSMOND MH 
+                                        1 
+                                 PADUA DA 
+                                        1 
+                                PARDINI D 
+                                        1 
+                                PARDINI J 
+                                        1 
+                                 PARKER T 
+                                        1 
+                              PATRICIOS J 
+                                        1 
+PEDIAT EMERGENCY RES CANADA PERC PERCPERC 
+                                        1 
+                                POWELL JW 
+                                        1 
+                                POWELL MR 
+                                        1 
+                               PUTUKIAN M 
+                                        1 
+                       REGISTER-MIHALIK J 
+                                        1 
+                                 RICHER L 
+                                        1 
+                                 ROWSON S 
+                                        1 
+                                 SANGHA G 
+                                        1 
+                                 SCHATZ P 
+                                        1 
+                             SCHNEIDER KJ 
+                                        1 
+                                SHANKAR V 
+                                        1 
+                                 SHRIER I 
+                                        1 
+                             SIGURDSSON A 
+                                        1 
+                                  SILLS A 
+                                        1 
+                                 SMITH BW 
+                                        1 
+                               SOLOMON TM 
+                                        1 
+                                 STEIN TD 
+                                        1 
+                                 STERN RA 
+                                        1 
+                                 TATOR CH 
+                                        1 
+                               TRIPODIS Y 
+                                        1 
+                                 TROOST J 
+                                        1 
+                        TROUTMAN-ENSEKI C 
+                                        1 
+                                 TURNER M 
+                                        1 
+                                  UGONI A 
+                                        1 
+                             VASSILYADI M 
+                                        1 
+                                   VOS PE 
+                                        1 
+                                   WANG Y 
+                                        1 
+                                WEAVER NL 
+                                        1 
+                                  WEUVE J 
+                                        1 
+                                YEATES KO 
+                                        1 
+                                  ZEMEK R 
+                                        1 
+                                  ZHONG J 
+                                        1 
+                                    ZHU T 
+                                        1 
+
+$AuthorsFrac
+                                       Author  Frequency
+92                              GUSKIEWICZ KM 2.65674603
+151                                 MCCRORY P 1.81031746
+134                                 LOVELL MR 1.59444444
+44                                 COLLINS MW 1.51944444
+158                               MEEUWISSE W 1.04776335
+60                                    DICK RW 1.00000000
+80                                    GIBBS N 1.00000000
+65                                   DVORAK J 0.96746032
+108                               JOHNSTON KM 0.88888889
+161                                MIHALIK JP 0.87500000
+142                               MARSHALL SW 0.86785714
+159                              MEEUWISSE WH 0.80000000
+107                                JOHNSTON K 0.73968254
+106                                IVERSON GL 0.67222222
+67                                   ELBIN RJ 0.65833333
+10                                    AUBRY M 0.65634921
+136                                MAKDISSI M 0.64841270
+150                                  MCCREA M 0.63174603
+34                                    CANTU R 0.62857143
+35                                   CANTU RC 0.62433862
+140                                  MAROON J 0.61666667
+70                                   EMERY CA 0.60000000
+42                                   COLLIE A 0.59285714
+157                                 MEEHAN WP 0.55808081
+47                                 COVASSIN T 0.53333333
+144                                  MARUFF P 0.50952381
+126                                LACROIX VJ 0.50000000
+129                                 LECLERC S 0.50000000
+141                                 MAROON JC 0.44444444
+172                                  NORWIG J 0.44444444
+165                                  MOLLOY M 0.42857143
+75                                    FIELD M 0.41666667
+188                                RANDOLPH C 0.36785714
+54                                    DAVIS G 0.36111111
+82                                    GIZA CC 0.36111111
+22                                  BENNELL K 0.34285714
+109                                 JORDAN BD 0.34285714
+12                            BARKHOUDARIAN G 0.33333333
+45                                COMSTOCK RD 0.33333333
+50                              D'HEMECOURT P 0.33333333
+89                                 GRINDEL SH 0.33333333
+103                                  HOVDA DA 0.33333333
+125                                LABELLA CR 0.33333333
+194                                  SCHATZ P 0.33333333
+198                              SIGURDSSON A 0.33333333
+200                                  SMITH BW 0.33333333
+121                                 KONTOS AP 0.32500000
+167                                   MUCHA A 0.32500000
+23                                  BENSON BW 0.30000000
+94                                HAMILTON GM 0.30000000
+11                                   BAILES J 0.29563492
+184                                  PODELL K 0.27777778
+9                                  ANDERSON V 0.25000000
+21                                    BELL DR 0.25000000
+56                                 DELANEY JS 0.25000000
+57                                 DELANEY TS 0.25000000
+79                                 GARRETT WE 0.25000000
+164                                MOHTADI NG 0.25000000
+178                                  PADUA DA 0.25000000
+213                                 WEAVER NL 0.25000000
+115                                  KELLY JP 0.22500000
+6                                    ALTAYE M 0.20000000
+18                                BAZARIAN JJ 0.20000000
+24                                    BLYTH B 0.20000000
+25                                  BORRINO A 0.20000000
+28                                BROLINSON G 0.20000000
+39                                   CECIL KM 0.20000000
+43                                  COLLINS M 0.20000000
+61                                  DIETTER D 0.20000000
+63                                     DUMA S 0.20000000
+73                                   FARLEY C 0.20000000
+83                                  GOFORTH M 0.20000000
+87                             GRAF-BAUMANN T 0.20000000
+97                                   HARRIS W 0.20000000
+105                                     IDE T 0.20000000
+114                                   KELLY J 0.20000000
+116                                KESSELS AG 0.20000000
+120                                  KONTOS A 0.20000000
+127                                    LAU BC 0.20000000
+128                                   LEACH J 0.20000000
+131                                  LEZAK MD 0.20000000
+133                                  LOVELL M 0.20000000
+145                                MATSER EJT 0.20000000
+147                                MAUGANS TA 0.20000000
+181                                  PARKER T 0.20000000
+191                                  ROWSON S 0.20000000
+193                               SCHAMASCH P 0.20000000
+206                                  TROOST J 0.20000000
+217                                   ZHONG J 0.20000000
+218                                     ZHU T 0.20000000
+4                                 ALMQUIST JL 0.16666667
+30                                   BROWN NJ 0.16666667
+31                                  BRUKNER P 0.16666667
+38                                 CASWELL SV 0.16666667
+52                                    DARBY D 0.16666667
+64                                    DUNN RE 0.16666667
+85                                  GOSTINE D 0.16666667
+98                                 HARTL ATCR 0.16666667
+100                                 HINTON RY 0.16666667
+132                                LINCOLN AE 0.16666667
+138                                 MANNIX RC 0.16666667
+152                                MCCRORY PR 0.16666667
+155                                 MCKEAG DB 0.16666667
+171                                 NORRIS JB 0.16666667
+174                                O'BRIEN MJ 0.16666667
+185                                 POWELL JW 0.16666667
+209                                   UGONI A 0.16666667
+33                                     BUSH A 0.14285714
+53                                   DARBY DG 0.14285714
+14                                     BARR W 0.12500000
+41                                  CIOCCA MF 0.12500000
+49                                 CROWELL DH 0.12500000
+59                                  DEWOLF RM 0.12500000
+77                                  FURMAN JM 0.12500000
+96                                 HARDING HP 0.12500000
+101                                 HOOKER DN 0.12500000
+139                               MARCHETTI G 0.12500000
+146                                MATTHEWS A 0.12500000
+162                                MIHALIK JR 0.12500000
+175                                 OLIARO SM 0.12500000
+176                                  ONATE JA 0.12500000
+196                                 SHANKAR V 0.12500000
+207                         TROUTMAN-ENSEKI C 0.12500000
+179                                 PARDINI D 0.11111111
+180                                 PARDINI J 0.11111111
+189                        REGISTER-MIHALIK J 0.11111111
+3                                      AHN KW 0.10000000
+15                                    BARR WB 0.10000000
+86                                   GOULET C 0.10000000
+91                               GUSKIEWICZ K 0.10000000
+93                                   HAGEL BE 0.10000000
+95                                 HAMMEKE TA 0.10000000
+111                                    KANG J 0.10000000
+148                             MCALLISTER JR 0.10000000
+170                          NETTEL-AGUIRRE A 0.10000000
+186                                 POWELL MR 0.10000000
+197                                  SHRIER I 0.10000000
+212                                    WANG Y 0.10000000
+1                            ABDOLMOHAMMADI B 0.03703704
+5                                   ALOSCO ML 0.03703704
+7                                  ALVAREZ VE 0.03703704
+17                                   BAUGH CM 0.03703704
+40                                CHAISSON CE 0.03703704
+46                                 CORMIER KA 0.03703704
+51                               DANESHVAR DH 0.03703704
+84                               GOLDSTEIN LE 0.03703704
+104                                  HUBER BR 0.03703704
+112                                   KATZ DI 0.03703704
+117                                KIERNAN PT 0.03703704
+122                                  KOWALL N 0.03703704
+123                                KUBILUS CA 0.03703704
+143                                 MARTIN BM 0.03703704
+149                                MCCLEAN MD 0.03703704
+154                                  MCHALE L 0.03703704
+156                                  MCKEE AC 0.03703704
+160                                     MEZ J 0.03703704
+166                             MONTENIGRO PH 0.03703704
+168                                  MURPHY L 0.03703704
+173                               NOWINSKI CJ 0.03703704
+201                                SOLOMON TM 0.03703704
+202                                  STEIN TD 0.03703704
+203                                  STERN RA 0.03703704
+205                                TRIPODIS Y 0.03703704
+214                                   WEUVE J 0.03703704
+2                                   AGLIPAY M 0.03030303
+8                                  ANDERSON P 0.03030303
+13                                   BARLOW K 0.03030303
+16                                BARROWMAN N 0.03030303
+19                               BEAUCHAMP MH 0.03030303
+20                                     BEER D 0.03030303
+26                                   BOUTIS K 0.03030303
+29                                  BROOKS BL 0.03030303
+32                                    BURNS E 0.03030303
+48                                    CRAIG W 0.03030303
+58                                 DEMATTEO C 0.03030303
+62                               DUBROVSKY AS 0.03030303
+72                                  FARION KJ 0.03030303
+76                                FREEDMAN SB 0.03030303
+78                                   GAGNON I 0.03030303
+81                                    GIOIA G 0.03030303
+88                                   GRAVEL J 0.03030303
+90                                   GROOL AM 0.03030303
+102                               HOSHIZAKI B 0.03030303
+110                                   KAMIL Y 0.03030303
+113                               KEIGHTLEY M 0.03030303
+119                                 KLASSEN T 0.03030303
+153                                MCGAHERN C 0.03030303
+163                           MIKROGIANAKIS A 0.03030303
+177                                 OSMOND MH 0.03030303
+183 PEDIAT EMERGENCY RES CANADA PERC PERCPERC 0.03030303
+190                                  RICHER L 0.03030303
+192                                  SANGHA G 0.03030303
+210                              VASSILYADI M 0.03030303
+215                                 YEATES KO 0.03030303
+216                                   ZEMEK R 0.03030303
+27                                  BROGLIO S 0.02777778
+36                                  CASSIDY D 0.02777778
+37                              CASTELLANI RJ 0.02777778
+55                                   DAVIS GA 0.02777778
+66                              ECHEMENDIA RJ 0.02777778
+68                               ELLENBOGEN R 0.02777778
+69                                    EMERY C 0.02777778
+71                              ENGEBRETSEN L 0.02777778
+74                        FEDDERMANN-DEMONT N 0.02777778
+99                                  HERRING S 0.02777778
+118                                 KISSICK J 0.02777778
+124                                 KUTCHER J 0.02777778
+130                                  LEDDY JJ 0.02777778
+135                                MADDOCKS D 0.02777778
+137                                 MANLEY GT 0.02777778
+169                                NAGAHIRO S 0.02777778
+182                               PATRICIOS J 0.02777778
+187                                PUTUKIAN M 0.02777778
+195                              SCHNEIDER KJ 0.02777778
+199                                   SILLS A 0.02777778
+204                                  TATOR CH 0.02777778
+208                                  TURNER M 0.02777778
+211                                    VOS PE 0.02777778
+
+$FirstAuthors
+ [1] "GUSKIEWICZ KM"   "GUSKIEWICZ KM"   "MCCRORY P"       "MCCRORY P"      
+ [5] "FIELD M"         "GUSKIEWICZ KM"   "GUSKIEWICZ KM"   "MCCRORY P"      
+ [9] "COLLINS MW"      "LOVELL MR"       "MCCRORY P"       "LINCOLN AE"     
+[13] "MATSER EJT"      "MCCRORY P"       "BARKHOUDARIAN G" "GUSKIEWICZ KM"  
+[17] "COLLINS MW"      "MAROON JC"       "GUSKIEWICZ KM"   "DELANEY TS"     
+[21] "MEEHAN WP"       "DICK RW"         "MCCREA M"        "COVASSIN T"     
+[25] "MAUGANS TA"      "MIHALIK JP"      "COLLINS M"       "MAKDISSI M"     
+[29] "LAU BC"          "MCCRORY P"       "BAZARIAN JJ"     "EMERY CA"       
+[33] "GRINDEL SH"      "MUCHA A"         "GUSKIEWICZ KM"   "EMERY CA"       
+[37] "MEZ J"           "GUSKIEWICZ KM"   "ZEMEK R"         "JOHNSTON KM"    
+[41] "BROWN NJ"        "LABELLA CR"      "DELANEY JS"      "ELBIN RJ"       
+[45] "ROWSON S"        "BENSON BW"       "MAKDISSI M"      "COLLIE A"       
+[49] "GIBBS N"         "MCCRORY P"      
+
+$nAUperPaper
+ [1]  8  7 10 10  4  4  8  7  6  9  7  6  5 36  3  8  6  6  1  4  3  1 10  5  5
+[26]  4  5  6  5  4  5  2  3  8  9 10 27  2 33  4  6  3  4  3  5  5  7  5  1  7
+
+$Appearances
+[1] 352
+
+$nAuthors
+[1] 218
+
+$AuMultiAuthoredArt
+[1] 215
+
+$AuSingleAuthoredArt
+[1] 3
+
+$MostCitedPapers
+                                  Paper           TC  TCperYear
+1       GUSKIEWICZ KM, 2003, JAMA-J AM MED ASSOC 857  53.562500
+2              GUSKIEWICZ KM, 2005, NEUROSURGERY 594  42.428571
+3               MCCRORY P, 2005, BR J SPORTS MED 491  35.071429
+4             MCCRORY P, 2005, BR J SPORTS MED-a 491  35.071429
+5                       FIELD M, 2003, J PEDIATR 476  29.750000
+6           GUSKIEWICZ KM, 2000, AM J SPORTS MED 462  24.315789
+7      GUSKIEWICZ KM, 2007, MED SCI SPORTS EXERC 421  35.083333
+8               MCCRORY P, 2009, BR J SPORTS MED 299  29.900000
+9                 COLLINS MW, 2002, NEUROSURGERY 286  16.823529
+10            LOVELL MR, 2006, APPL NEUROPSYCHOL 283  21.769231
+11             MCCRORY P, 2009, CLIN J SPORT MED 273  27.300000
+12             LINCOLN AE, 2011, AM J SPORTS MED 266  33.250000
+13         MATSER EJT, 1999, JAMA-J AM MED ASSOC 241  12.050000
+14              MCCRORY P, 2017, BR J SPORTS MED 226 113.000000
+15        BARKHOUDARIAN G, 2011, CLIN SPORTS MED 224  28.000000
+16             GUSKIEWICZ KM, 2007, NEUROSURGERY 209  17.416667
+17            COLLINS MW, 2003, CLIN J SPORT MED 209  13.062500
+18                 MAROON JC, 2000, NEUROSURGERY 195  10.263158
+19         GUSKIEWICZ KM, 2001, CLIN J SPORT MED 188  10.444444
+20            DELANEY TS, 2002, CLIN J SPORT MED 185  10.882353
+21              MEEHAN WP, 2010, AM J SPORTS MED 172  19.111111
+22                DICK RW, 2009, BR J SPORTS MED 172  17.200000
+23        MCCREA M, 2013, J INT NEUROPSYCHOL SOC 157  26.166667
+24             COVASSIN T, 2012, AM J SPORTS MED 154  22.000000
+25                  MAUGANS TA, 2012, PEDIATRICS 154  22.000000
+26                MIHALIK JP, 2007, NEUROSURGERY 153  12.750000
+27                 COLLINS M, 2006, NEUROSURGERY 153  11.769231
+28             MAKDISSI M, 2010, AM J SPORTS MED 149  16.555556
+29                 LAU BC, 2011, AM J SPORTS MED 140  17.500000
+30              MCCRORY P, 2004, BR J SPORTS MED 135   9.000000
+31         BAZARIAN JJ, 2012, MAGN RESON IMAGING 130  18.571429
+32               EMERY CA, 2006, AM J SPORTS MED 123   9.461538
+33            GRINDEL SH, 2001, CLIN J SPORT MED 123   6.833333
+34                MUCHA A, 2014, AM J SPORTS MED 119  23.800000
+35          GUSKIEWICZ KM, 2013, BR J SPORTS MED 117  19.500000
+36           EMERY CA, 2010, JAMA-J AM MED ASSOC 116  12.888889
+37              MEZ J, 2017, JAMA-J AM MED ASSOC 113  56.500000
+38      GUSKIEWICZ KM, 2011, EXERC SPORT SCI REV 111  13.875000
+39            ZEMEK R, 2016, JAMA-J AM MED ASSOC 110  36.666667
+40           JOHNSTON KM, 2001, CLIN J SPORT MED 110   6.111111
+41                    BROWN NJ, 2014, PEDIATRICS 109  21.800000
+42        LABELLA CR, 2002, MED SCI SPORTS EXERC 109   6.411765
+43            DELANEY JS, 2000, CLIN J SPORT MED 106   5.578947
+44               ELBIN RJ, 2011, AM J SPORTS MED 102  12.750000
+45     ROWSON S, 2009, J BIOMECH ENG -TRANS ASME 101  10.100000
+46              BENSON BW, 2009, BR J SPORTS MED 101  10.100000
+47             MAKDISSI M, 2001, BR J SPORTS MED 100   5.555556
+48 COLLIE A, 2006, J NEUROL NEUROSURG PSYCHIATRY  99   7.615385
+49                GIBBS N, 1993, AM J SPORTS MED  98   3.769231
+50              MCCRORY P, 2009, J CLIN NEUROSCI  97   9.700000
+
+$Years
+ [1] 2003 2005 2005 2005 2003 2000 2007 2009 2002 2006 2009 2011 1999 2017 2011
+[16] 2007 2003 2000 2001 2002 2010 2009 2013 2012 2012 2007 2006 2010 2011 2004
+[31] 2012 2006 2001 2014 2013 2010 2017 2011 2016 2001 2014 2002 2000 2011 2009
+[46] 2009 2001 2006 1993 2009
+
+$FirstAffiliation
+ [1] "UNIV N CAROLINA"                      
+ [2] "UNIV N CAROLINA"                      
+ [3] "EMERSON HOSP"                         
+ [4] "EMERSON HOSP"                         
+ [5] "UNIV PITTSBURGH"                      
+ [6] "UNIV N CAROLINA"                      
+ [7] "UNIV N CAROLINA"                      
+ [8] "UNIV MELBOURNE"                       
+ [9] "UNIV PITTSBURGH"                      
+[10] "UNIV PITTSBURGH"                      
+[11] "UNIV MELBOURNE"                       
+[12] "MEDSTAR HLTH RES INST"                
+[13] "ST ANNA HOSP"                         
+[14] "FLOREY INST NEUROSCI AND MENTAL HLTH" 
+[15] "UNIV CALIF LOS ANGELES"               
+[16] "UNIV N CAROLINA"                      
+[17] "UNIV PITTSBURGH"                      
+[18] "UNIV PITTSBURGH"                      
+[19] "UNIV N CAROLINA"                      
+[20] "MCGILL SPORT MED CLIN"                
+[21] "CHILDRENS HOSP BOSTON"                
+[22] NA                                     
+[23] "MED COLL WISCONSIN"                   
+[24] "MICHIGAN STATE UNIV"                  
+[25] "CINCINNATI CHILDRENS HOSP MED CTR"    
+[26] "UNIV N CAROLINA"                      
+[27] "CTR SPORTS MED"                       
+[28] "UNIV MELBOURNE"                       
+[29] "UNIV PITTSBURGH"                      
+[30] "UNIV MELBOURNE"                       
+[31] "UNIV ROCHESTER"                       
+[32] "UNIV CALGARY"                         
+[33] "UNIV PITTSBURGH"                      
+[34] "UNIV PITTSBURGH"                      
+[35] "UNIV N CAROLINA"                      
+[36] "UNIV CALGARY"                         
+[37] "BOSTON UNIV"                          
+[38] "UNIV N CAROLINA"                      
+[39] "RES INST"                             
+[40] "MCGILL UNIV"                          
+[41] "CHILDRENS HOSP PHILADELPHIA"          
+[42] "UNIV N CAROLINA"                      
+[43] "MCGILL SPORT MED CLIN"                
+[44] "ST JOSEPHS UNIV"                      
+[45] "CTR INJURY BIOMECH"                   
+[46] "UNIV CALGARY"                         
+[47] "MENTAL HLTH RES INST VICTORIA"        
+[48] "UNIV MELBOURNE"                       
+[49] "S SYDNEY ORTHOPAED AND SPORTS MED CTR"
+[50] "UNIV MELBOURNE"                       
+
+$Affiliations
+AFF
+                        UNIV N CAROLINA                            UNIV CALGARY 
+                                     30                                      24 
+                         UNIV MELBOURNE                             BOSTON UNIV 
+                                     18                                      17 
+                        UNIV PITTSBURGH                            EMERSON HOSP 
+                                     16                                      14 
+                            MCGILL UNIV                      MED COLL WISCONSIN 
+                                     13                                      10 
+                        SCHULTHESS CLIN                  UNIV CALIF LOS ANGELES 
+                                      8                                       7 
+   FLOREY INST NEUROSCI AND MENTAL HLTH                   CHILDRENS HOSP BOSTON 
+                                      6                                       5 
+      CINCINNATI CHILDRENS HOSP MED CTR                   UNIV BRITISH COLUMBIA 
+                                      4                                       4 
+                           CTR NEUROSCI         FIFA MED ASSESSMENT AND RES CTR 
+                                      3                                       3 
+                            LOYOLA UNIV                    OTTAWA SPORT MED CTR 
+                                      3                                       3 
+                                SCH MED                    TORONTO REHABIL INST 
+                                      3                                       3 
+                            UNIV OTTAWA                            UNIV TORONTO 
+                                      3                                       3 
+                        UNIV WASHINGTON                   BOSTON CHILDRENS HOSP 
+                                      3                                       2 
+                     BURKE REHABIL HOSP          CHILDRENS HOSP EASTERN ONTARIO 
+                                      2                                       2 
+        FIFA MED RES AND ASSESSMENT CTR                            INDIANA UNIV 
+                                      2                                       2 
+                  MCGILL SPORT MED CLIN                    MCGILL SPORT MED CTR 
+                                      2                                       2 
+          MENTAL HLTH RES INST VICTORIA                     MICHIGAN STATE UNIV 
+                                      2                                       2 
+  NATL CTR CATASTROPH SPORTS INJURY RES                      NATL HOCKEY LEAGUE 
+                                      2                                       2 
+NATL HOCKEY LEAGUE NEUROPSYCHOL PROGRAM                NEUROL SPORTS INJURY CTR 
+                                      2                                       2 
+                      NORTHWESTERN UNIV                 STOLLERY CHILDRENS HOSP 
+                                      2                                       2 
+                          UNIV COLORADO                    UNIV HOSP MAASTRICHT 
+                                      2                                       2 
+                          UNIV MONTREAL                         VANDERBILT UNIV 
+                                      2                                       2 
+                        W VIRGINIA UNIV         ALBERTA CHILDRENS PROV GEN HOSP 
+                                      2                                       1 
+           AUSTIN AND REPATRIAT MED CTR                             AUSTIN HOSP 
+                                      1                                       1 
+                     BLOORVIEW RES INST                        BRAIN INJURY CTR 
+                                      1                                       1 
+                 BRAINTREE REHABIL HOSP                            CABRINI HOSP 
+                                      1                                       1 
+                    CHICAGO NEUROL INST             CHILDRENS HOSP PHILADELPHIA 
+                                      1                                       1 
+                     CONCUSS LEGACY FDN                            CORNELL UNIV 
+                                      1                                       1 
+                     CTR INJURY BIOMECH                          CTR SPORTS MED 
+                                      1                                       1 
+               DEPT VET AFFAIRS MED CTR  EDWARD VIA VIRGINIA COLL OSTEOPATH MED 
+                                      1                                       1 
+                    EMERGENCY SERV INST                            ERASMUS UNIV 
+                                      1                                       1 
+ FIFA MED ASSESSMENT AND RES CTR F MARC  FIFA MED RES AND ASSESSMENT CTR F MARC 
+                                      1                                       1 
+                     FLORIDA STATE UNIV                  GEORGE WASHINGTON UNIV 
+                                      1                                       1 
+                        HARVARD MED SCH                            HARVARD UNIV 
+                                      1                                       1 
+                     HOSP SICK CHILDREN                            IWK HLTH CTR 
+                                      1                                       1 
+                          LA TROBE UNIV                 MANITOBA CHILDRENS HOSP 
+                                      1                                       1 
+           MARSHFIELD CLIN MINOCQUA CTR              MATTEL CHILDRENS HOSP UCLA 
+                                      1                                       1 
+                          MCMASTER UNIV                   MEDSTAR HLTH RES INST 
+                                      1                                       1 
+      MICHELI CTR SPORTS INJURY PREVENT              MURDOCH CHILDRENS RES INST 
+                                      1                                       1 
+           NATL INTREPID CTR EXCELLENCE              NORTH SHORE UNIV HLTH SYST 
+                                      1                                       1 
+                OLYMP PK SPORTS MED CTR                    OREGON HLTH SCI UNIV 
+                                      1                                       1 
+                         OSLO UNIV HOSP                          PRINCETON UNIV 
+                                      1                                       1 
+       PSYCHOL AND NEUROBEHAV ASSOC INC                        RES AND PROD DEV 
+                                      1                                       1 
+                               RES INST                          RIVERVIEW HOSP 
+                                      1                                       1 
+                   ROYAL CHILDRENS HOSP   S SYDNEY ORTHOPAED AND SPORTS MED CTR 
+                                      1                                       1 
+                     SPORTS NEUROL CLIN                            ST ANNA HOSP 
+                                      1                                       1 
+                        ST JOSEPHS UNIV                           STANFORD UNIV 
+                                      1                                       1 
+                           SUNY BUFFALO                       SWISS CONCUSS CTR 
+                                      1                                       1 
+                   TORONTO WESTERN HOSP                TORONTO WESTERN RES INST 
+                                      1                                       1 
+    UCLA STEVE TISCH BRAINSPORT PROGRAM                UNIV CALIF SAN FRANCISCO 
+                                      1                                       1 
+               UNIV CINCINNATI COLL MED                        UNIV HOSP ZURICH 
+                                      1                                       1 
+                             UNIV LAVAL                           UNIV MARYLAND 
+                                      1                                       1 
+                          UNIV MICHIGAN               UNIV MISSOURI KANSAS CITY 
+                                      1                                       1 
+                          UNIV PRETORIA                          UNIV ROCHESTER 
+                                      1                                       1 
+                   UNIV WESTERN ONTARIO                      UNIV WITWATERSRAND 
+                                      1                                       1 
+              VA BOSTON HEALTHCARE SYST                           VIRGINIA TECH 
+                                      1                                       1 
+
+$Aff_frac
+                                Affiliation  Frequency
+98                          UNIV N CAROLINA 7.35367539
+100                         UNIV PITTSBURGH 6.18799020
+94                           UNIV MELBOURNE 3.97701398
+85                             UNIV CALGARY 3.55497986
+45                              MCGILL UNIV 2.38014706
+12                    CHILDRENS HOSP BOSTON 1.37984496
+24                             EMERSON HOSP 1.35252461
+51                      MICHIGAN STATE UNIV 1.25000000
+48                    MEDSTAR HLTH RES INST 1.00000000
+70    S SYDNEY ORTHOPAED AND SPORTS MED CTR 1.00000000
+75                          ST JOSEPHS UNIV 1.00000000
+86                   UNIV CALIF LOS ANGELES 1.00000000
+102                          UNIV ROCHESTER 1.00000000
+84                    UNIV BRITISH COLUMBIA 0.95000000
+15        CINCINNATI CHILDRENS HOSP MED CTR 0.80000000
+47                       MED COLL WISCONSIN 0.78296832
+72                          SCHULTHESS CLIN 0.77894627
+6                               BOSTON UNIV 0.75876306
+43                    MCGILL SPORT MED CLIN 0.66666667
+38                            LA TROBE UNIV 0.50000000
+49            MENTAL HLTH RES INST VICTORIA 0.50000000
+36                             INDIANA UNIV 0.40000000
+63                     OTTAWA SPORT MED CTR 0.36111111
+80                     TORONTO REHABIL INST 0.36111111
+18                       CTR INJURY BIOMECH 0.33333333
+22   EDWARD VIA VIRGINIA COLL OSTEOPATH MED 0.33333333
+90                     UNIV HOSP MAASTRICHT 0.33333333
+109                           VIRGINIA TECH 0.33333333
+30     FLOREY INST NEUROSCI AND MENTAL HLTH 0.31976744
+26          FIFA MED ASSESSMENT AND RES CTR 0.31944444
+19                             CTR NEUROSCI 0.28535354
+9                        BURKE REHABIL HOSP 0.25757576
+39                              LOYOLA UNIV 0.25116550
+17                             CORNELL UNIV 0.25000000
+20                           CTR SPORTS MED 0.25000000
+66                         RES AND PROD DEV 0.25000000
+68                           RIVERVIEW HOSP 0.25000000
+71                                  SCH MED 0.23717949
+57                 NEUROL SPORTS INJURY CTR 0.20202020
+110                         W VIRGINIA UNIV 0.20202020
+2              AUSTIN AND REPATRIAT MED CTR 0.20000000
+69                     ROYAL CHILDRENS HOSP 0.20000000
+88                 UNIV CINCINNATI COLL MED 0.20000000
+92                               UNIV LAVAL 0.20000000
+7                          BRAIN INJURY CTR 0.16666667
+14              CHILDRENS HOSP PHILADELPHIA 0.16666667
+25                             ERASMUS UNIV 0.16666667
+50        MICHELI CTR SPORTS INJURY PREVENT 0.16666667
+59                        NORTHWESTERN UNIV 0.16666667
+61                     OREGON HLTH SCI UNIV 0.16666667
+74                             ST ANNA HOSP 0.16666667
+103                            UNIV TORONTO 0.12984496
+27   FIFA MED ASSESSMENT AND RES CTR F MARC 0.12500000
+44                     MCGILL SPORT MED CTR 0.12132353
+53    NATL CTR CATASTROPH SPORTS INJURY RES 0.12132353
+54                       NATL HOCKEY LEAGUE 0.12132353
+55  NATL HOCKEY LEAGUE NEUROPSYCHOL PROGRAM 0.12132353
+89                            UNIV COLORADO 0.12132353
+28          FIFA MED RES AND ASSESSMENT CTR 0.11764706
+31                       FLORIDA STATE UNIV 0.11111111
+99                              UNIV OTTAWA 0.10658915
+11                      CHICAGO NEUROL INST 0.09090909
+5                     BOSTON CHILDRENS HOSP 0.08514493
+3                               AUSTIN HOSP 0.08333333
+10                             CABRINI HOSP 0.08333333
+13           CHILDRENS HOSP EASTERN ONTARIO 0.08333333
+23                      EMERGENCY SERV INST 0.08333333
+77                  STOLLERY CHILDRENS HOSP 0.08333333
+97                            UNIV MONTREAL 0.08333333
+41             MARSHFIELD CLIN MINOCQUA CTR 0.07692308
+56             NATL INTREPID CTR EXCELLENCE 0.07692308
+104                         UNIV WASHINGTON 0.06976744
+29   FIFA MED RES AND ASSESSMENT CTR F MARC 0.06250000
+108                         VANDERBILT UNIV 0.04651163
+8                    BRAINTREE REHABIL HOSP 0.04347826
+16                       CONCUSS LEGACY FDN 0.04347826
+21                 DEPT VET AFFAIRS MED CTR 0.04347826
+34                             HARVARD UNIV 0.04347826
+76                            STANFORD UNIV 0.04347826
+107               VA BOSTON HEALTHCARE SYST 0.04347826
+1           ALBERTA CHILDRENS PROV GEN HOSP 0.04166667
+4                        BLOORVIEW RES INST 0.04166667
+32                   GEORGE WASHINGTON UNIV 0.04166667
+35                       HOSP SICK CHILDREN 0.04166667
+37                             IWK HLTH CTR 0.04166667
+40                  MANITOBA CHILDRENS HOSP 0.04166667
+46                            MCMASTER UNIV 0.04166667
+67                                 RES INST 0.04166667
+105                    UNIV WESTERN ONTARIO 0.04166667
+33                          HARVARD MED SCH 0.02325581
+42               MATTEL CHILDRENS HOSP UCLA 0.02325581
+52               MURDOCH CHILDRENS RES INST 0.02325581
+58               NORTH SHORE UNIV HLTH SYST 0.02325581
+60                  OLYMP PK SPORTS MED CTR 0.02325581
+62                           OSLO UNIV HOSP 0.02325581
+64                           PRINCETON UNIV 0.02325581
+65         PSYCHOL AND NEUROBEHAV ASSOC INC 0.02325581
+73                       SPORTS NEUROL CLIN 0.02325581
+78                             SUNY BUFFALO 0.02325581
+79                        SWISS CONCUSS CTR 0.02325581
+81                     TORONTO WESTERN HOSP 0.02325581
+82                 TORONTO WESTERN RES INST 0.02325581
+83      UCLA STEVE TISCH BRAINSPORT PROGRAM 0.02325581
+87                 UNIV CALIF SAN FRANCISCO 0.02325581
+91                         UNIV HOSP ZURICH 0.02325581
+93                            UNIV MARYLAND 0.02325581
+95                            UNIV MICHIGAN 0.02325581
+96                UNIV MISSOURI KANSAS CITY 0.02325581
+101                           UNIV PRETORIA 0.02325581
+106                      UNIV WITWATERSRAND 0.02325581
+
+$CO
+ [1] "USA"            "USA"            "AUSTRALIA"      "AUSTRALIA"     
+ [5] "USA"            "USA"            "USA"            "AUSTRALIA"     
+ [9] "USA"            "USA"            "AUSTRALIA"      "USA"           
+[13] "NETHERLANDS"    "AUSTRALIA"      "USA"            "USA"           
+[17] "USA"            "USA"            "USA"            "CANADA"        
+[21] "USA"            "USA"            "USA"            "USA"           
+[25] "USA"            "USA"            "USA"            "AUSTRALIA"     
+[29] "USA"            "AUSTRALIA"      "USA"            "CANADA"        
+[33] "USA"            "USA"            "USA"            "CANADA"        
+[37] "USA"            "USA"            "CANADA"         "AUSTRALIA"     
+[41] "USA"            "USA"            "CANADA"         "USA"           
+[45] "USA"            "CANADA"         "AUSTRALIA"      "UNITED KINGDOM"
+[49] "AUSTRALIA"      "AUSTRALIA"     
+
+$Countries
+Tab
+           USA      AUSTRALIA         CANADA    NETHERLANDS UNITED KINGDOM 
+            31             11              6              1              1 
+
+$CountryCollaboration
+         Country SCP MCP
+1            USA  26   5
+2      AUSTRALIA   4   7
+3         CANADA   4   2
+4    NETHERLANDS   0   1
+5 UNITED KINGDOM   1   0
+
+$TotalCitation
+ [1] 857 594 491 491 476 462 421 299 286 283 273 266 241 226 224 209 209 195 188
+[20] 185 172 172 157 154 154 153 153 149 140 135 130 123 123 119 117 116 113 111
+[39] 110 110 109 109 106 102 101 101 100  99  98  97
+
+$TCperYear
+ [1]  53.562500  42.428571  35.071429  35.071429  29.750000  24.315789  35.083333
+ [8]  29.900000  16.823529  21.769231  27.300000  33.250000  12.050000 113.000000
+[15]  28.000000  17.416667  13.062500  10.263158  10.444444  10.882353  19.111111
+[22]  17.200000  26.166667  22.000000  22.000000  12.750000  11.769231  16.555556
+[29]  17.500000   9.000000  18.571429   9.461538   6.833333  23.800000  19.500000
+[36]  12.888889  56.500000  13.875000  36.666667   6.111111  21.800000   6.411765
+[43]   5.578947  12.750000  10.100000  10.100000   5.555556   7.615385   3.769231
+[50]   9.700000
+
+$Sources
+SO
+                          AMERICAN JOURNAL OF SPORTS MEDICINE 
+                                                           10 
+                           BRITISH JOURNAL OF SPORTS MEDICINE 
+                                                            9 
+                           CLINICAL JOURNAL OF SPORT MEDICINE 
+                                                            7 
+                                                 NEUROSURGERY 
+                                                            6 
+             JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION 
+                                                            5 
+                  MEDICINE AND SCIENCE IN SPORTS AND EXERCISE 
+                                                            2 
+                                                   PEDIATRICS 
+                                                            2 
+                                      APPLIED NEUROPSYCHOLOGY 
+                                                            1 
+                                   CLINICS IN SPORTS MEDICINE 
+                                                            1 
+                          EXERCISE AND SPORT SCIENCES REVIEWS 
+                                                            1 
+JOURNAL OF BIOMECHANICAL ENGINEERING-TRANSACTIONS OF THE ASME 
+                                                            1 
+                             JOURNAL OF CLINICAL NEUROSCIENCE 
+                                                            1 
+             JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY 
+                                                            1 
+                                        JOURNAL OF PEDIATRICS 
+                                                            1 
+      JOURNAL OF THE INTERNATIONAL NEUROPSYCHOLOGICAL SOCIETY 
+                                                            1 
+                                   MAGNETIC RESONANCE IMAGING 
+                                                            1 
+
+$DE
+Tab
+                           CONCUSSION                                SPORTS 
+                                   22                                     5 
+               TRAUMATIC BRAIN INJURY                                IMPACT 
+                                    5                                     4 
+                             SYMPTOMS                              FOOTBALL 
+                                    4                                     3 
+                          HEAD INJURY                                HELMET 
+                                    3                                     3 
+          MILD TRAUMATIC BRAIN INJURY                NEUROCOGNITIVE TESTING 
+                                    3                                     3 
+             NEUROPSYCHOLOGICAL TESTS                    POSTURAL STABILITY 
+                                    3                                     3 
+                                SPORT                       ATHLETIC INJURY 
+                                    3                                     2 
+                              BALANCE                          BIOMECHANICS 
+                                    2                                     2 
+                     BRAIN CONCUSSION                          BRAIN INJURY 
+                                    2                                     2 
+                  CEREBRAL CONCUSSION                           HIGH SCHOOL 
+                                    2                                     2 
+                     INJURY THRESHOLD                          RISK FACTORS 
+                                    2                                     2 
+                      SPORTS MEDICINE                          ACCELERATION 
+                                    2                                     1 
+                                  AGE                             ALZHEIMER 
+                                    1                                     1 
+                  ANTEROGRADE AMNESIA                BIOMEDICAL MEASUREMENT 
+                                    1                                     1 
+                                BRAIN                          BRAIN TRAUMA 
+                                    1                                     1 
+               CENTRAL NERVOUS SYSTEM                   CEREBRAL BLOOD FLOW 
+                                    1                                     1 
+    CEREBRAL METABOLISM HEAD INJURIES                  CHILD AND ADOLESCENT 
+                                    1                                     1 
+                              CHRONIC                    CLOSED HEAD INJURY 
+                                    1                                     1 
+                            COGNITION                             COGNITIVE 
+                                    1                                     1 
+                         COHORT STUDY                              DEMENTIA 
+                                    1                                     1 
+                         EPIDEMIOLOGY                       GRADING SYSTEMS 
+                                    1                                     1 
+                        HELMET DESIGN                                HOCKEY 
+                                    1                                     1 
+     IMPACT ACCELERATION/DECELERATION                                INJURY 
+                                    1                                     1 
+                      INJURY SEVERITY              INTERCOLLEGIATE ATHLETES 
+                                    1                                     1 
+                LOSS OF CONSCIOUSNESS       MAGNETIC RESONANCE SPECTROSCOPY 
+                                    1                                     1 
+                                 MILD             MILD COGNITIVE IMPAIRMENT 
+                                    1                                     1 
+   MILD TRAUMATIC BRAIN INJURY (MTBI)                  MOLECULAR MECHANISMS 
+                                    1                                     1 
+                     MOUTH PROTECTORS                            MOUTHGUARD 
+                                    1                                     1 
+                                  MRI                                  MTBI 
+                                    1                                     1 
+                           NEUROLOGIC                NEUROLOGICAL DISORDERS 
+                                    1                                     1 
+            NEUROLOGICAL RISK FACTORS           NEUROPSYCHOLOGICAL FUNCTION 
+                                    1                                     1 
+                      NEUROPSYCHOLOGY                          OCULAR MOTOR 
+                                    1                                     1 
+                        ORAL INJURIES                       PATHOPHYSIOLOGY 
+                                    1                                     1 
+                    PATIENT DIAGNOSIS           PEDIATRIC ATHLETIC INJURIES 
+                                    1                                     1 
+                           PEDIATRICS              POST-CONCUSSION SYNDROME 
+                                    1                                     1 
+              POSTCONCUSSION SYNDROME                 PROFESSIONAL FOOTBALL 
+                                    1                                     1 
+                            PROGNOSIS                           PSYCHIATRIC 
+                                    1                                     1 
+                        RECOVERY TIME                           RELIABILITY 
+                                    1                                     1 
+RETIRED PROFESSIONAL FOOTBALL PLAYERS                    RETROGRADE AMNESIA 
+                                    1                                     1 
+                       RETURN TO PLAY                SECOND IMPACT SYNDROME 
+                                    1                                     1 
+         SENSORY ORGANIZATION TESTING                              SEVERITY 
+                                    1                                     1 
+                                  SEX                        SIGNS/SYMPTOMS 
+                                    1                                     1 
+                               SOCCER                        SPORT INJURIES 
+                                    1                                     1 
+             SPORT-RELATED CONCUSSION                       SPORTS INJURIES 
+                                    1                                     1 
+                     SYMPTOM DURATION                            UNIVERSITY 
+                                    1                                     1 
+                           VESTIBULAR 
+                                    1 
+
+$ID
+Tab
+             TRAUMATIC BRAIN-INJURY                         HEAD-INJURY 
+                                 21                                  13 
+                CEREBRAL CONCUSSION                            RECOVERY 
+                                 12                                  11 
+                       EPIDEMIOLOGY                    FOOTBALL PLAYERS 
+                                  9                                   9 
+            STANDARDIZED ASSESSMENT                         HIGH-SCHOOL 
+                                  8                                   7 
+                    NCAA CONCUSSION                         PERFORMANCE 
+                                  7                                   7 
+              PROFESSIONAL FOOTBALL            SPORT-RELATED CONCUSSION 
+                                  7                                   7 
+                         MANAGEMENT              TRAUMATIC BRAIN INJURY 
+                                  6                                   6 
+                      UNITED-STATES         COLLEGIATE FOOTBALL PLAYERS 
+                                  6                                   5 
+                   MILD HEAD-INJURY                             PLAYERS 
+                                  5                                   5 
+                             SPORTS                 AGREEMENT STATEMENT 
+                                  5                                   4 
+           INTERNATIONAL-CONFERENCE                   MINOR HEAD-INJURY 
+                                  4                                   4 
+                 POSTURAL STABILITY       PROFESSIONAL FOOTBALL PLAYERS 
+                                  4                                   4 
+                PROTECTIVE HEADGEAR                RECURRENT CONCUSSION 
+                                  4                                   4 
+          SPORTS-RELATED CONCUSSION                            SYMPTOMS 
+                                  4                                   4 
+                 ALZHEIMERS-DISEASE                      CERVICAL-SPINE 
+                                  3                                   3 
+               COGNITIVE IMPAIRMENT                          CONCUSSION 
+                                  3                                   3 
+                     CONTACT SPORTS                          GUIDELINES 
+                                  3                                   3 
+                             IMPACT NEUROPSYCHOLOGICAL TEST-PERFORMANCE 
+                                  3                                   3 
+            POSTCONCUSSION SYNDROME                    POSTURAL CONTROL 
+                                  3                                   3 
+                           SEVERITY                     SOCCER INJURIES 
+                                  3                                   3 
+               AMYLOID BETA-PROTEIN          APOLIPOPROTEIN-E EPSILON-4 
+                                  2                                   2 
+                      AXONAL INJURY                             BALANCE 
+                                  2                                   2 
+                       BRAIN INJURY                       CONSCIOUSNESS 
+                                  2                                   2 
+                           DEMENTIA                           DIZZINESS 
+                                  2                                   2 
+               EMERGENCY-DEPARTMENT                       HEAD-INJURIES 
+                                  2                                   2 
+                         IMPAIRMENT                            INJURIES 
+                                  2                                   2 
+                      LEAGUE PLAYER          NEUROCOGNITIVE PERFORMANCE 
+                                  2                                   2 
+      NEUROPSYCHOLOGICAL ASSESSMENT         NEUROPSYCHOLOGICAL DEFICITS 
+                                  2                                   2 
+        NEUROPSYCHOLOGICAL FUNCTION                         ORIENTATION 
+                                  2                                   2 
+                         PREVENTION                                RATS 
+                                  2                                   2 
+                             RETURN                         SAFE RETURN 
+                                  2                                   2 
+                 SEVERE HEAD-INJURY                     SEX-DIFFERENCES 
+                                  2                                   2 
+                          STATEMENT                     TEMPORAL WINDOW 
+                                  2                                   2 
+                             TRAUMA                    YOUTH ICE HOCKEY 
+                                  2                                   2 
+                       1ST EXPOSURE                          2ND IMPACT 
+                                  1                                   1 
+                         ADAPTATION                         ADOLESCENTS 
+                                  1                                   1 
+                  AMERICAN FOOTBALL                             AMNESIA 
+                                  1                                   1 
+                        ASSOCIATION              ATHLETIC HEAD-INJURIES 
+                                  1                                   1 
+                  ATHLETIC-TRAINERS                 AUSTRALIAN FOOTBALL 
+                                  1                                   1 
+          AUSTRALIAN RULES FOOTBALL        AUSTRALIAN RULES FOOTBALLERS 
+                                  1                                   1 
+                  BALANCE DISORDERS                 BASKETBALL INJURIES 
+                                  1                                   1 
+                            BATTERY              BICYCLE SAFETY HELMETS 
+                                  1                                   1 
+                         BLOOD-FLOW                       BODY-CHECKING 
+                                  1                                   1 
+                              BRAIN                        BRAIN-INJURY 
+                                  1                                   1 
+                            CALGARY             CANADIAN AMATEUR HOCKEY 
+                                  1                                   1 
+             CENTRAL-NERVOUS-SYSTEM                 CEREBRAL BLOOD-FLOW 
+                                  1                                   1 
+                CEREBRAL-BLOOD-FLOW                            CHILDREN 
+                                  1                                   1 
+   CHRONIC TRAUMATIC ENCEPHALOPATHY                    COLLEGE FOOTBALL 
+                                  1                                   1 
+                     COMA DATA-BANK                           COMMUNITY 
+                                  1                                   1 
+                COMPUTED-TOMOGRAPHY                 CONSENSUS STATEMENT 
+                                  1                                   1 
+                        CONSISTENCY                         CONSUMPTION 
+                                  1                                   1 
+             CORTICAL IMPACT INJURY                            CRITERIA 
+                                  1                                   1 
+                            DEFICIT               DELAYED DETERIORATION 
+                                  1                                   1 
+           DESCRIPTIVE EPIDEMIOLOGY                              DT-MRI 
+                                  1                                   1 
+                    DYNAMIC CHANGES                         DYSFUNCTION 
+                                  1                                   1 
+               ERROR SCORING SYSTEM              EXCITATORY AMINO-ACIDS 
+                                  1                                   1 
+           EXPERIMENTAL HEAD-INJURY             EXTRACELLULAR POTASSIUM 
+                                  1                                   1 
+                 FITTED MOUTHGUARDS             FLUID PERCUSSION INJURY 
+                                  1                                   1 
+                           FOOTBALL   FRONTOTEMPORAL LOBAR DEGENERATION 
+                                  1                                   1 
+                     FUNCTIONAL MRI                  GENDER-DIFFERENCES 
+                                  1                                   1 
+                GLUCOSE-UTILIZATION                            HANDICAP 
+                                  1                                   1 
+                  HEAD ACCELERATION                HEAD IMPACT SEVERITY 
+                                  1                                   1 
+                       HEAD IMPACTS                         HEAD TRAUMA 
+                                  1                                   1 
+                             HEALTH                        HIGH-SCHOOLS 
+                                  1                                   1 
+                         ICE HOCKEY                 ICE HOCKEY INJURIES 
+                                  1                                   1 
+                            IMPACTS                              INJURY 
+                                  1                                   1 
+         INJURY SURVEILLANCE SYSTEM                        INTERVENTION 
+                                  1                                   1 
+              INTRACRANIAL-PRESSURE           INTRAVENTRICULAR PRESSURE 
+                                  1                                   1 
+             LONG-TERM POTENTIATION          LONGITUDINAL DATA-ANALYSIS 
+                                  1                                   1 
+    MAGNETIC-RESONANCE-SPECTROSCOPY                    MAJOR DEPRESSION 
+                                  1                                   1 
+                           MEDICINE                       MENTAL STATUS 
+                                  1                                   1 
+                       METAANALYSIS                          METABOLISM 
+                                  1                                   1 
+                               MILD           MILD COGNITIVE IMPAIRMENT 
+                                  1                                   1 
+          MITOCHONDRIAL DYSFUNCTION                MODERATE HEAD-INJURY 
+                                  1                                   1 
+               MOTOR-NEURON DISEASE                  NATIONAL INSTITUTE 
+                                  1                                   1 
+                      NECK INJURIES                         NECK-INJURY 
+                                  1                                   1 
+        NEUROPSYCHOLOGICAL SEQUELAE    NEUROPSYCHOLOGICAL TEST PROTOCOL 
+                                  1                                   1 
+                  OF-THE-LITERATURE                               ONSET 
+                                  1                                   1 
+                 OROFACIAL INJURIES                  PARKINSONS-DISEASE 
+                                  1                                   1 
+                      PARTICIPATION                     PATHOPHYSIOLOGY 
+                                  1                                   1 
+               PEDIATRIC CONCUSSION                                  PH 
+                                  1                                   1 
+          POISSON REGRESSION-MODELS        POSITRON EMISSION TOMOGRAPHY 
+                                  1                                   1 
+       POSITRON-EMISSION-TOMOGRAPHY             POSTCONCUSSION SYMPTOMS 
+                                  1                                   1 
+                         PREDICTORS                          PREVALENCE 
+                                  1                                   1 
+             PROTON MR SPECTROSCOPY         RANDOMIZED CONTROLLED-TRIAL 
+                                  1                                   1 
+                                RAT                               RATES 
+                                  1                                   1 
+                      REACTION-TIME                      REHABILITATION 
+                                  1                                   1 
+                        RELIABILITY              REPETITIVE HEAD-INJURY 
+                                  1                                   1 
+                         RETROGRADE                        RISK-FACTORS 
+                                  1                                   1 
+                        RUGBY UNION                RUGBY UNION FOOTBALL 
+                                  1                                   1 
+                             SCHOOL                             SCIENCE 
+                                  1                                   1 
+      SEGMENT DYNAMIC STABILIZATION                 SENSORY INTERACTION 
+                                  1                                   1 
+                           SEQUELAE                      SOCCER PLAYERS 
+                                  1                                   1 
+                         SPORT HELD                        SPORT INJURY 
+                                  1                                   1 
+                      STABILIZATION                              STANCE 
+                                  1                                   1 
+                            SUPPORT                                SWAY 
+                                  1                                   1 
+         TECHNETIUM-99M-HMPAO SPECT                    TEST-PERFORMANCE 
+                                  1                                   1 
+            TEST-RETEST RELIABILITY                         TEST-SCORES 
+                                  1                                   1 
+                               TIME                           TOLERANCE 
+                                  1                                   1 
+            TRAUMATIC AXONAL INJURY                VERBAL-LEARNING TEST 
+                                  1                                   1 
+                           WHIPLASH                      WILD BOOTSTRAP 
+                                  1                                   1 
+                             ZURICH 
+                                  1 
+
+$Documents
+ARTICLE                         ARTICLE, PROCEEDINGS PAPER      
+                             39                               5 
+EDITORIAL MATERIAL              REVIEW                          
+                              1                               5 
+
+$DB
+[1] "ISI"
+
+attr(,"class")
+[1] "bibliometrix"

 
 
 
+
+
+
+
+
+
plot(x = results, k = 10, pause = FALSE)
+

+
+
+

+
+
+

+
+
+

+
+
+

+
+
+

+
+
+
 
    
 
  • readFiles: Load a sequence of ISI or SCOPUS Export files into a large…
    • 
 

@@ -1822,7 +3312,7 @@ 
read.wos.R
-
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
+
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
diff --git a/scopus.Rmd b/scopus.Rmd new file mode 100644 index 0000000..5201c80 --- /dev/null +++ b/scopus.Rmd @@ -0,0 +1,14 @@ +--- +title: "Scopus" +output: html_notebook +--- + + +# rscopus + +https://cran.r-project.org/web/packages/rscopus/rscopus.pdf + + + + + diff --git a/scopus.nb.html b/scopus.nb.html new file mode 100644 index 0000000..cabfc92 --- /dev/null +++ b/scopus.nb.html @@ -0,0 +1,1817 @@ + + + + + + + + + + + + + +Scopus + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ + + + + + + + + + +
LS0tCnRpdGxlOiAiU2NvcHVzIgpvdXRwdXQ6IGh0bWxfbm90ZWJvb2sKLS0tCgoKIyByc2NvcHVzCgpodHRwczovL2NyYW4uci1wcm9qZWN0Lm9yZy93ZWIvcGFja2FnZXMvcnNjb3B1cy9yc2NvcHVzLnBkZgoKCgoKCg==
+ + + +
+ + + + + + + +