From afe33c2e16118770b8e5860260857cfa494c0862 Mon Sep 17 00:00:00 2001 From: SERDAR BALCI Date: Sun, 17 Nov 2019 19:47:54 +0300 Subject: [PATCH] update 1 --- BalciS.Rmd | 1 - Sources.Rmd | 73 ++++++++++++++-- Sources.nb.html | 224 ++++++++++++++++++++++++++++++------------------ 3 files changed, 209 insertions(+), 89 deletions(-) diff --git a/BalciS.Rmd b/BalciS.Rmd index c116a0c..f041fd4 100644 --- a/BalciS.Rmd +++ b/BalciS.Rmd @@ -29,4 +29,3 @@ BalciSdoi <- BalciS$V2 ```{r} write(BalciSdoi, "data/BalciSdoi.txt") ``` - diff --git a/Sources.Rmd b/Sources.Rmd index b01285b..3a6d6de 100644 --- a/Sources.Rmd +++ b/Sources.Rmd @@ -60,12 +60,6 @@ and --- - - - - - - # Codes for data download ## PubMed @@ -103,6 +97,40 @@ https://www.nlm.nih.gov/bsd/licensee/data_elements_doc.html https://dtd.nlm.nih.gov/ncbi/pubmed/out/doc/2018/ +### Edirect docker + +- Official NCBI EDirect docker image + +https://github.com/ncbi/docker/tree/master/edirect + +- ncbi-docker + +https://github.com/ncbi/docker + +- NCBI EDirect Docker image + +https://hub.docker.com/r/ncbi/edirect + +`docker pull ncbi/edirect` + + + + +### edirect anaconda + +https://anaconda.org/bioconda/repo + +https://anaconda.org/bioconda/entrez-direct + +`conda install -c bioconda entrez-direct` + + + + + + + + ### Entrez Direct: E-utilities on the UNIX Command Line - Entrez Direct: E-utilities on the UNIX Command Line @@ -165,6 +193,21 @@ https://github.com/ldbib/MEDLINEXMLToJSON https://github.com/titipata/pubmed_parser/wiki +## WOS + +## EigenFactor + +- EigenFactor Search + +http://www.eigenfactor.org/projects/journalRank/journalsearch.php + +- Scholarly publications + +http://www.eigenfactor.org/papers.php + +- Projects + +http://www.eigenfactor.org/projects.php ## ORCID @@ -201,6 +244,8 @@ caffeinate ``` + + ### AllenNLP https://allennlp.org/ @@ -218,6 +263,12 @@ https://github.com/allenai/allennlp https://allenai.org/semantic-scholar/citeomatic/ +### an error + +https://www.semanticscholar.org/paper/PBPath-Journal-Watch/46b65ddf9128eed990f938d1db7a1f1473b4c7c9 + +https://pdfs.semanticscholar.org/46b6/5ddf9128eed990f938d1db7a1f1473b4c7c9.pdf?_ga=2.114635586.411458507.1562087790-426299917.1562087790 + @@ -414,6 +465,16 @@ Söz konusu veri tabanına https://trdizin.gov.tr/search/projectSearch.xhtml lin https://trdizin.gov.tr/ +## bioRxiv API + + +http://api.biorxiv.org/ + + +http://api.biorxiv.org/reports/ + + + --- # Software diff --git a/Sources.nb.html b/Sources.nb.html index 9befe8c..7f2a3f0 100644 --- a/Sources.nb.html +++ b/Sources.nb.html @@ -7,11 +7,12 @@ + - + Bibliographic Studies @@ -2559,7 +2560,7 @@ // create a collapsable div to wrap the code in var div = $('
'); - if (show) + if (show || $(this)[0].classList.contains('fold-show')) div.addClass('in'); var id = 'rcode-643E0F36' + currentIndex++; div.attr('id', id); @@ -2657,7 +2658,6 @@ } img { max-width:100%; - height: auto; } .tabbed-pane { padding-top: 12px; @@ -2755,57 +2755,12 @@ } - - - - - - -