DESCRIPTION

Package: Trendy
Type: Package
Title: Breakpoint analysis of time-course expression data
Version: 1.25.1
Author: Rhonda Bacher and Ning Leng
Maintainer: Rhonda Bacher <rbacher@ufl.edu>
Description: Trendy implements segmented (or breakpoint) regression models 
  to estimate breakpoints which represent changes in expression for each
  feature/gene in high throughput data with ordered conditions.
Depends: 
    R (>= 3.4)
Imports: stats,
    utils,
    graphics,
    grDevices,
    segmented,
    gplots,
    parallel,
    magrittr,
    BiocParallel,
    DT, 
    S4Vectors,
    SummarizedExperiment, 
    methods,
    shiny,
    shinyFiles
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Suggests:
	BiocStyle,
	knitr,
	rmarkdown,
	devtools
VignetteBuilder: knitr
biocViews: TimeCourse, RNASeq, Regression, ImmunoOncology
URL: https://github.com/rhondabacher/Trendy