little fixes; now passing R CMD check if examples skipped

Author: pbreheny

.Rbuildignore

@@ -2,3 +2,4 @@
 ^\.Rproj\.user$
 ^\.lintr$
 ^ex$
+^\.project\.url$

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: hdrm
 Title: High-Dimensional Regression Modeling
-Date: 2023-12-09
-Version: 0.8.0
+Date: 2023-12-13
+Version: 0.9.0
 Author: Patrick Breheny and Jian Huang
 Maintainer: Patrick Breheny <patrick-breheny@uiowa.edu>
 Description: Examples, simulations, and figures from the book, "High-Dimensional

R/mfdr-power.R

@@ -2,6 +2,8 @@
 #'
 #' Reproduces Example Figure 6.4 from the book.  If you specify any options, your results may look different.
 #'
+#' @param out   Output of `Ex6.2()`
+#'
 #' @examples
 #' \dontrun{
 #' out <- Ex6.2()

README.md

@@ -1,4 +1,4 @@
-[![GitHub version](https://img.shields.io/static/v1?label=GitHub&message=0.8.0&color=blue&logo=github)](https://github.com/pbreheny/hdrm)
+[![GitHub version](https://img.shields.io/static/v1?label=GitHub&message=0.9.0&color=blue&logo=github)](https://github.com/pbreheny/hdrm)
 
 # hdrm: High dimensional regression modeling
 

inst/tinytest/gen_data.r

@@ -50,8 +50,8 @@ ggplot2::autoplot(res)
 rho <- 0.4
 b <- rnorm(10)
 E <- (1-rho)*diag(10) + matrix(rho, 10, 10)
-expect_equal(crossprod(b, E) %*% b |> drop(), calc_bsb(b, rho, 'exchangeable'))
+expect_equal(crossprod(b, E) %*% b |> drop(), hdrm:::calc_bsb(b, rho, 'exchangeable'))
 rho <- 0.9
 RHO <- matrix(rho^(0:9), 10, 10, byrow=TRUE)
 A <- Matrix::bandSparse(10, k=0:9, diagonals=RHO, symmetric=TRUE)
-expect_equal(crossprod(b, A) %*% b |> drop(), calc_bsb(b, rho, 'autoregressive'))
+expect_equal(crossprod(b, A) %*% b |> drop(), hdrm:::calc_bsb(b, rho, 'autoregressive'))

man/Ex6.3.Rd

@@ -66,7 +66,7 @@ the analysis as well.
     occupations
   \item
     \code{Poor}: Percentage of households with annual income under
-    \$3,000 in 1960
+    $3,000 in 1960
   \item
     \code{HC}: Pollution potential of hydrocarbons
   \item
@@ -87,4 +87,4 @@ McDonald GC and Schwing RC (1973). Instabilities of Regression Estimates
 Relating Air Pollution to Mortality. \emph{Technometrics}, \bold{15}:
 463-481.
 
-}
+}