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[BUG]: mamba install fails in nvcr.io/nvidia/morpheus/morpheus:23.01-runtime #808

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richardincyberspace opened this issue Mar 28, 2023 · 2 comments
Closed
2 tasks done

[BUG]: mamba install fails in nvcr.io/nvidia/morpheus/morpheus:23.01-runtime #808

richardincyberspace opened this issue Mar 28, 2023 · 2 comments
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bug Something isn't working Needs Triage Need team to review and classify

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@richardincyberspace
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Version

23.01

Which installation method(s) does this occur on?

Docker

Describe the bug.

mamba install fails in nvcr.io/nvidia/morpheus/morpheus:23.01-runtime

Minimum reproducible example

docker run --rm -ti --runtime=nvidia --gpus=all --net=host -v /var/run/docker.sock:/var/run/docker.sock \
-v $(pwd):/workspace nvcr.io/nvidia/morpheus/morpheus:23.01-runtime bash
(morpheus) root@richard-dlrm-perf:/workspace# echo ${CONDA_DEFAULT_ENV}
morpheus
(morpheus) root@richard-dlrm-perf:/workspace# mamba env update -n ${CONDA_DEFAULT_ENV} -f examples/gnn_fraud_detection_pipeline/requirements.yml
nvidia/noarch                                        2.8kB @  17.8kB/s  0.2s
nvidia/linux-64                                    112.1kB @ 632.6kB/s  0.2s
rapidsai/noarch                                      5.9kB @  20.6kB/s  0.3s
nvidia/label/dev/linux-64                           36.9kB @ 123.3kB/s  0.3s
nvidia/label/dev/noarch                            135.0 B @ 431.0 B/s  0.2s
stellargraph/noarch                                  1.1kB @   2.5kB/s  0.2s
stellargraph/linux-64                              139.0 B @ 193.0 B/s  0.4s
rapidsai/linux-64                                  345.2kB @ 414.8kB/s  0.8s
conda-forge/noarch                                  11.7MB @   4.0MB/s  2.7s
conda-forge/linux-64                                30.5MB @   3.8MB/s  8.0s


Looking for: ['chardet=5.0.0', 'cuml=22.08', 'stellargraph=1.2.1', 'tensorflow=2.9.1']


Could not solve for environment specs
Encountered problems while solving:
  - package pyarrow-9.0.0-py38hb328d0c_2_cuda requires arrow-cpp 9.0.0 py38ha31b012_2_cuda, but none of the providers can be installed

The environment can't be solved, aborting the operation

(morpheus) root@richard-dlrm-perf:/workspace#

Relevant log output

No response

Full env printout

❯ ./external/utilities/scripts/print_env.sh
<details><summary>Click here to see environment details</summary><pre>
     
     **git***
     commit 8a9e644b204802d55703ff3d1567a2f9296b8620 (HEAD -> branch-23.03, origin/branch-23.03, origin/HEAD)
     Author: David Gardner <96306125+dagardner-nv@users.noreply.github.com>
     Date:   Mon Mar 27 22:02:19 2023 -0700
     
     Add InMemorySinkStage (#752)
     
     * Adds two new in-memory stages `InMemorySourceStage` & `InMemorySinkStage`
     * `CompareDataFrameStage`, which was formerly a part of the tests, now inherits from `InMemorySinkStage` and is a part of the public API
     * `ValidationStage` now inherits from `CompareDataFrameStage`
     * Stages which were in `tests/utils.py` have now been moved into their own modules under `tests/stages/`
     * The `set_source` and `add_stage` methods of `LinearPipeline` now return the stage being added
     * Fix a bug in `compare_df` when `include_columns` is not `None`.
     * `tests/test_serialize_stage_pipe.py` folded into `tests/test_file_in_out.py` since it was an end-to-end test and not a true test of the serialize stage.
     * Most tests now make use of the new `filter_probs_df` fixture along with the `InMemorySourceStage` & `CompareDataFrameStage` stages rather than `FileSourceStage` & `WriteToFileStage`, this cuts down on the amount of temporary files written to disk and redundant code.
     
     Note: Tests which either explicitly test either the `FileSourceStage` & `WriteToFileStage` stages or replicate a real-world pipeline remain unchanged.
     
     Fixes #746
     
     Authors:
     - David Gardner (https://github.com/dagardner-nv)
     - Michael Demoret (https://github.com/mdemoret-nv)
     
     Approvers:
     - Michael Demoret (https://github.com/mdemoret-nv)
     
     URL: https://github.com/nv-morpheus/Morpheus/pull/752
     **git submodules***
     145069979b10c90f12116f1984a124b02be664e9 external/morpheus-visualizations (v23.01.00a-3-g1450699)
     c49cae5e510a08934272284ffcf683488680acc4 external/utilities (v23.03.00a-10-gc49cae5)
     
     ***OS Information***
     DISTRIB_ID=Ubuntu
     DISTRIB_RELEASE=22.04
     DISTRIB_CODENAME=jammy
     DISTRIB_DESCRIPTION="Ubuntu 22.04.1 LTS"
     PRETTY_NAME="Ubuntu 22.04.1 LTS"
     NAME="Ubuntu"
     VERSION_ID="22.04"
     VERSION="22.04.1 LTS (Jammy Jellyfish)"
     VERSION_CODENAME=jammy
     ID=ubuntu
     ID_LIKE=debian
     HOME_URL="https://www.ubuntu.com/"
     SUPPORT_URL="https://help.ubuntu.com/"
     BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
     PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
     UBUNTU_CODENAME=jammy
     Linux richard-dlrm-perf 5.15.0-1027-oracle #33-Ubuntu SMP Fri Jan 6 16:30:21 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
     
     ***GPU Information***
     Tue Mar 28 16:41:51 2023
     +-----------------------------------------------------------------------------+
     | NVIDIA-SMI 515.65.07    Driver Version: 515.65.07    CUDA Version: 11.7     |
     |-------------------------------+----------------------+----------------------+
     | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
     | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
     |                               |                      |               MIG M. |
     |===============================+======================+======================|
     |   0  NVIDIA A10          Off  | 00000000:17:00.0 Off |                    0 |
     |  0%   30C    P8    20W / 150W |      0MiB / 23028MiB |      0%      Default |
     |                               |                      |                  N/A |
     +-------------------------------+----------------------+----------------------+
     |   1  NVIDIA A10          Off  | 00000000:31:00.0 Off |                    0 |
     |  0%   30C    P8    19W / 150W |      0MiB / 23028MiB |      0%      Default |
     |                               |                      |                  N/A |
     +-------------------------------+----------------------+----------------------+
     |   2  NVIDIA A10          Off  | 00000000:B1:00.0 Off |                    0 |
     |  0%   30C    P8    20W / 150W |      0MiB / 23028MiB |      0%      Default |
     |                               |                      |                  N/A |
     +-------------------------------+----------------------+----------------------+
     |   3  NVIDIA A10          Off  | 00000000:CA:00.0 Off |                    0 |
     |  0%   30C    P8    19W / 150W |      0MiB / 23028MiB |      0%      Default |
     |                               |                      |                  N/A |
     +-------------------------------+----------------------+----------------------+
     
     +-----------------------------------------------------------------------------+
     | Processes:                                                                  |
     |  GPU   GI   CI        PID   Type   Process name                  GPU Memory |
     |        ID   ID                                                   Usage      |
     |=============================================================================|
     |  No running processes found                                                 |
     +-----------------------------------------------------------------------------+
     
     ***CPU***
     Architecture:                    x86_64
     CPU op-mode(s):                  32-bit, 64-bit
     Address sizes:                   46 bits physical, 57 bits virtual
     Byte Order:                      Little Endian
     CPU(s):                          128
     On-line CPU(s) list:             0-127
     Vendor ID:                       GenuineIntel
     Model name:                      Intel(R) Xeon(R) Platinum 8358 CPU @ 2.60GHz
     CPU family:                      6
     Model:                           106
     Thread(s) per core:              2
     Core(s) per socket:              32
     Socket(s):                       2
     Stepping:                        6
     CPU max MHz:                     3400.0000
     CPU min MHz:                     800.0000
     BogoMIPS:                        5200.00
     Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 invpcid_single intel_ppin ssbd mba ibrs ibpb stibp ibrs_enhanced tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid cqm rdt_a avx512f avx512dq rdseed adx smap avx512ifma clflushopt clwb intel_pt avx512cd sha_ni avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local split_lock_detect wbnoinvd dtherm ida arat pln pts hwp hwp_act_window hwp_epp hwp_pkg_req avx512vbmi umip pku ospke avx512_vbmi2 gfni vaes vpclmulqdq avx512_vnni avx512_bitalg tme avx512_vpopcntdq la57 rdpid fsrm md_clear pconfig flush_l1d arch_capabilities
     Virtualization:                  VT-x
     L1d cache:                       3 MiB (64 instances)
     L1i cache:                       2 MiB (64 instances)
     L2 cache:                        80 MiB (64 instances)
     L3 cache:                        96 MiB (2 instances)
     NUMA node(s):                    2
     NUMA node0 CPU(s):               0-31,64-95
     NUMA node1 CPU(s):               32-63,96-127
     Vulnerability Itlb multihit:     Not affected
     Vulnerability L1tf:              Not affected
     Vulnerability Mds:               Not affected
     Vulnerability Meltdown:          Not affected
     Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT vulnerable
     Vulnerability Retbleed:          Not affected
     Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl and seccomp
     Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
     Vulnerability Spectre v2:        Mitigation; Enhanced IBRS, IBPB conditional, RSB filling, PBRSB-eIBRS SW sequence
     Vulnerability Srbds:             Not affected
     Vulnerability Tsx async abort:   Not affected
     
     ***CMake***
     
     ***g++***
     /usr/bin/g++
     g++ (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0
     Copyright (C) 2021 Free Software Foundation, Inc.
     This is free software; see the source for copying conditions.  There is NO
     warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
     
     
     ***nvcc***
     
     ***Python***
     /nvme0/ubuntu/anaconda3/bin/python
     Python 3.10.9
     
     ***Environment Variables***
     PATH                            : /nvme0/ubuntu/anaconda3/bin:/nvme0/ubuntu/anaconda3/condabin:/home/ubuntu/bin:/home/ubuntu/.vscode-server/bin/ee2b180d582a7f601fa6ecfdad8d9fd269ab1884/bin/remote-cli:/home/ubuntu/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
     LD_LIBRARY_PATH                 :
     NUMBAPRO_NVVM                   :
     NUMBAPRO_LIBDEVICE              :
     CONDA_PREFIX                    : /nvme0/ubuntu/anaconda3
     PYTHON_PATH                     :
     
     ***conda packages***
     /nvme0/ubuntu/anaconda3/bin/conda
     # packages in environment at /nvme0/ubuntu/anaconda3:
     #
     # Name                    Version                   Build  Channel
     _libgcc_mutex             0.1                        main
     _openmp_mutex             5.1                       1_gnu
     alabaster                 0.7.12             pyhd3eb1b0_0
     anaconda-client           1.11.1          py310h06a4308_0
     anaconda-navigator        2.4.0           py310h06a4308_0
     anaconda-project          0.11.1          py310h06a4308_0
     anyio                     3.5.0           py310h06a4308_0
     appdirs                   1.4.4              pyhd3eb1b0_0
     argon2-cffi               21.3.0             pyhd3eb1b0_0
     argon2-cffi-bindings      21.2.0          py310h7f8727e_0
     arrow                     1.2.3           py310h06a4308_1
     astroid                   2.14.2          py310h06a4308_0
     astropy                   5.1             py310ha9d4c09_0
     asttokens                 2.0.5              pyhd3eb1b0_0
     atomicwrites              1.4.0                      py_0
     attrs                     22.1.0          py310h06a4308_0
     automat                   20.2.0                     py_0
     autopep8                  1.6.0              pyhd3eb1b0_1
     babel                     2.11.0          py310h06a4308_0
     backcall                  0.2.0              pyhd3eb1b0_0
     backports                 1.1                pyhd3eb1b0_0
     backports.functools_lru_cache 1.6.4              pyhd3eb1b0_0
     backports.tempfile        1.0                pyhd3eb1b0_1
     backports.weakref         1.0.post1                  py_1
     bcrypt                    3.2.0           py310h5eee18b_1
     beautifulsoup4            4.11.1          py310h06a4308_0
     binaryornot               0.4.4              pyhd3eb1b0_1
     black                     22.6.0          py310h06a4308_0
     blas                      1.0                         mkl
     bleach                    4.1.0              pyhd3eb1b0_0
     blosc                     1.21.3               h6a678d5_0
     bokeh                     2.4.3           py310h06a4308_0
     bottleneck                1.3.5           py310ha9d4c09_0
     brotli                    1.0.9                h5eee18b_7
     brotli-bin                1.0.9                h5eee18b_7
     brotlipy                  0.7.0           py310h7f8727e_1002
     brunsli                   0.1                  h2531618_0
     bzip2                     1.0.8                h7b6447c_0
     c-ares                    1.18.1               h7f8727e_0
     ca-certificates           2023.01.10           h06a4308_0
     certifi                   2022.12.7       py310h06a4308_0
     cffi                      1.15.1          py310h5eee18b_3
     cfitsio                   3.470                h5893167_7
     chardet                   4.0.0           py310h06a4308_1003
     charls                    2.2.0                h2531618_0
     charset-normalizer        2.0.4              pyhd3eb1b0_0
     click                     8.0.4           py310h06a4308_0
     cloudpickle               2.0.0              pyhd3eb1b0_0
     clyent                    1.2.2           py310h06a4308_1
     colorama                  0.4.6           py310h06a4308_0
     colorcet                  3.0.1           py310h06a4308_0
     comm                      0.1.2           py310h06a4308_0
     conda                     23.1.0          py310h06a4308_0
     conda-build               3.23.3          py310h06a4308_0
     conda-content-trust       0.1.3           py310h06a4308_0
     conda-pack                0.6.0              pyhd3eb1b0_0
     conda-package-handling    2.0.2           py310h06a4308_0
     conda-package-streaming   0.7.0           py310h06a4308_0
     conda-repo-cli            1.0.27          py310h06a4308_0
     conda-token               0.4.0              pyhd3eb1b0_0
     conda-verify              3.4.2                      py_1
     constantly                15.1.0          py310h06a4308_0
     contourpy                 1.0.5           py310hdb19cb5_0
     cookiecutter              1.7.3              pyhd3eb1b0_0
     cryptography              39.0.1          py310h9ce1e76_0
     cssselect                 1.1.0              pyhd3eb1b0_0
     curl                      7.87.0               h5eee18b_0
     cycler                    0.11.0             pyhd3eb1b0_0
     cytoolz                   0.12.0          py310h5eee18b_0
     daal4py                   2023.0.2        py310h3c18c91_0
     dal                       2023.0.1         hdb19cb5_26647
     dask                      2022.7.0        py310h06a4308_0
     dask-core                 2022.7.0        py310h06a4308_0
     datashader                0.14.4          py310h06a4308_0
     datashape                 0.5.4           py310h06a4308_1
     dbus                      1.13.18              hb2f20db_0
     debugpy                   1.5.1           py310h295c915_0
     decorator                 5.1.1              pyhd3eb1b0_0
     defusedxml                0.7.1              pyhd3eb1b0_0
     diff-match-patch          20200713           pyhd3eb1b0_0
     dill                      0.3.6           py310h06a4308_0
     distributed               2022.7.0        py310h06a4308_0
     docstring-to-markdown     0.11            py310h06a4308_0
     docutils                  0.18.1          py310h06a4308_3
     entrypoints               0.4             py310h06a4308_0
     et_xmlfile                1.1.0           py310h06a4308_0
     executing                 0.8.3              pyhd3eb1b0_0
     expat                     2.4.9                h6a678d5_0
     filelock                  3.9.0           py310h06a4308_0
     flake8                    6.0.0           py310h06a4308_0
     flask                     2.2.2           py310h06a4308_0
     flit-core                 3.6.0              pyhd3eb1b0_0
     fontconfig                2.14.1               h52c9d5c_1
     fonttools                 4.25.0             pyhd3eb1b0_0
     freetype                  2.12.1               h4a9f257_0
     fsspec                    2022.11.0       py310h06a4308_0
     future                    0.18.3          py310h06a4308_0
     gensim                    4.3.0           py310h1128e8f_0
     giflib                    5.2.1                h5eee18b_3
     glib                      2.69.1               he621ea3_2
     glob2                     0.7                pyhd3eb1b0_0
     gmp                       6.2.1                h295c915_3
     gmpy2                     2.1.2           py310heeb90bb_0
     greenlet                  2.0.1           py310h6a678d5_0
     gst-plugins-base          1.14.1               h6a678d5_1
     gstreamer                 1.14.1               h5eee18b_1
     h5py                      3.7.0           py310he06866b_0
     hdf5                      1.10.6               h3ffc7dd_1
     heapdict                  1.0.1              pyhd3eb1b0_0
     holoviews                 1.15.4          py310h06a4308_0
     huggingface_hub           0.10.1          py310h06a4308_0
     hvplot                    0.8.2           py310h06a4308_0
     hyperlink                 21.0.0             pyhd3eb1b0_0
     icu                       58.2                 he6710b0_3
     idna                      3.4             py310h06a4308_0
     imagecodecs               2021.8.26       py310h46e8fbd_2
     imageio                   2.26.0          py310h06a4308_0
     imagesize                 1.4.1           py310h06a4308_0
     imbalanced-learn          0.10.1          py310h06a4308_0
     importlib-metadata        4.11.3          py310h06a4308_0
     importlib_metadata        4.11.3               hd3eb1b0_0
     incremental               21.3.0             pyhd3eb1b0_0
     inflection                0.5.1           py310h06a4308_0
     iniconfig                 1.1.1              pyhd3eb1b0_0
     intake                    0.6.7           py310h06a4308_0
     intel-openmp              2021.4.0          h06a4308_3561
     intervaltree              3.1.0              pyhd3eb1b0_0
     ipykernel                 6.19.2          py310h2f386ee_0
     ipython                   8.10.0          py310h06a4308_0
     ipython_genutils          0.2.0              pyhd3eb1b0_1
     ipywidgets                7.6.5              pyhd3eb1b0_1
     isort                     5.9.3              pyhd3eb1b0_0
     itemadapter               0.3.0              pyhd3eb1b0_0
     itemloaders               1.0.4              pyhd3eb1b0_1
     itsdangerous              2.0.1              pyhd3eb1b0_0
     jedi                      0.18.1          py310h06a4308_1
     jeepney                   0.7.1              pyhd3eb1b0_0
     jellyfish                 0.9.0           py310h7f8727e_0
     jinja2                    3.1.2           py310h06a4308_0
     jinja2-time               0.2.0              pyhd3eb1b0_3
     jmespath                  0.10.0             pyhd3eb1b0_0
     joblib                    1.1.1           py310h06a4308_0
     jpeg                      9e                   h5eee18b_1
     jq                        1.6               h27cfd23_1000
     json5                     0.9.6              pyhd3eb1b0_0
     jsonschema                4.17.3          py310h06a4308_0
     jupyter                   1.0.0           py310h06a4308_8
     jupyter_client            7.3.4           py310h06a4308_0
     jupyter_console           6.6.2           py310h06a4308_0
     jupyter_core              5.2.0           py310h06a4308_0
     jupyter_server            1.23.4          py310h06a4308_0
     jupyterlab                3.5.3           py310h06a4308_0
     jupyterlab_pygments       0.1.2                      py_0
     jupyterlab_server         2.19.0          py310h06a4308_0
     jupyterlab_widgets        1.0.0              pyhd3eb1b0_1
     jxrlib                    1.1                  h7b6447c_2
     keyring                   23.4.0          py310h06a4308_0
     kiwisolver                1.4.4           py310h6a678d5_0
     krb5                      1.19.4               h568e23c_0
     lazy-object-proxy         1.6.0           py310h7f8727e_0
     lcms2                     2.12                 h3be6417_0
     ld_impl_linux-64          2.38                 h1181459_1
     lerc                      3.0                  h295c915_0
     libaec                    1.0.4                he6710b0_1
     libarchive                3.6.2                hab531cd_0
     libbrotlicommon           1.0.9                h5eee18b_7
     libbrotlidec              1.0.9                h5eee18b_7
     libbrotlienc              1.0.9                h5eee18b_7
     libclang                  10.0.1          default_hb85057a_2
     libcurl                   7.87.0               h91b91d3_0
     libdeflate                1.17                 h5eee18b_0
     libedit                   3.1.20221030         h5eee18b_0
     libev                     4.33                 h7f8727e_1
     libevent                  2.1.12               h8f2d780_0
     libffi                    3.4.2                h6a678d5_6
     libgcc-ng                 11.2.0               h1234567_1
     libgfortran-ng            11.2.0               h00389a5_1
     libgfortran5              11.2.0               h1234567_1
     libgomp                   11.2.0               h1234567_1
     liblief                   0.12.3               h6a678d5_0
     libllvm10                 10.0.1               hbcb73fb_5
     libllvm11                 11.1.0               h9e868ea_6
     libnghttp2                1.46.0               hce63b2e_0
     libpng                    1.6.39               h5eee18b_0
     libpq                     12.9                 h16c4e8d_3
     libprotobuf               3.20.3               he621ea3_0
     libsodium                 1.0.18               h7b6447c_0
     libspatialindex           1.9.3                h2531618_0
     libssh2                   1.10.0               h8f2d780_0
     libstdcxx-ng              11.2.0               h1234567_1
     libtiff                   4.5.0                h6a678d5_2
     libuuid                   1.41.5               h5eee18b_0
     libwebp                   1.2.4                h11a3e52_1
     libwebp-base              1.2.4                h5eee18b_1
     libxcb                    1.15                 h7f8727e_0
     libxkbcommon              1.0.1                hfa300c1_0
     libxml2                   2.9.14               h74e7548_0
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     lzo                       2.10                 h7b6447c_2
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     mpi                       1.0                       mpich
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     nltk                      3.7                pyhd3eb1b0_0
     notebook                  6.5.2           py310h06a4308_0
     notebook-shim             0.2.2           py310h06a4308_0
     nspr                      4.33                 h295c915_0
     nss                       3.74                 h0370c37_0
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     numexpr                   2.8.4           py310h8879344_0
     numpy                     1.23.5          py310hd5efca6_0
     numpy-base                1.23.5          py310h8e6c178_0
     numpydoc                  1.5.0           py310h06a4308_0
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     openpyxl                  3.0.10          py310h5eee18b_0
     openssl                   1.1.1t               h7f8727e_0
     packaging                 22.0            py310h06a4308_0
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     panel                     0.14.3          py310h06a4308_0
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     partd                     1.2.0              pyhd3eb1b0_1
     patch                     2.7.6             h7b6447c_1001
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     pcre                      8.45                 h295c915_0
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     pillow                    9.4.0           py310h6a678d5_0
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     py                        1.11.0             pyhd3eb1b0_0
     py-lief                   0.12.3          py310h6a678d5_0
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     pyasn1-modules            0.2.8                      py_0
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     pydispatcher              2.0.5           py310h06a4308_2
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     pygments                  2.11.2             pyhd3eb1b0_0
     pyhamcrest                2.0.2              pyhd3eb1b0_2
     pyjwt                     2.4.0           py310h06a4308_0
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     pylint-venv               2.3.0           py310h06a4308_0
     pyls-spyder               0.4.0              pyhd3eb1b0_0
     pyodbc                    4.0.34          py310h6a678d5_0
     pyopenssl                 23.0.0          py310h06a4308_0
     pyparsing                 3.0.9           py310h06a4308_0
     pyqt                      5.15.7          py310h6a678d5_1
     pyqt5-sip                 12.11.0                  pypi_0    pypi
     pyqtwebengine             5.15.7          py310h6a678d5_1
     pyrsistent                0.18.0          py310h7f8727e_0
     pysocks                   1.7.1           py310h06a4308_0
     pytables                  3.7.0           py310hf19a122_1
     pytest                    7.1.2           py310h06a4308_0
     python                    3.10.9               h7a1cb2a_1
     python-dateutil           2.8.2              pyhd3eb1b0_0
     python-fastjsonschema     2.16.2          py310h06a4308_0
     python-libarchive-c       2.9                pyhd3eb1b0_1
     python-lsp-black          1.2.1           py310h06a4308_0
     python-lsp-jsonrpc        1.0.0              pyhd3eb1b0_0
     python-lsp-server         1.7.1           py310h06a4308_0
     python-slugify            5.0.2              pyhd3eb1b0_0
     python-snappy             0.6.1           py310h6a678d5_0
     pytoolconfig              1.2.5           py310h06a4308_1
     pytorch                   1.12.1          cpu_py310hb1f1ab4_1
     pytz                      2022.7          py310h06a4308_0
     pyviz_comms               2.0.2              pyhd3eb1b0_0
     pywavelets                1.4.1           py310h5eee18b_0
     pyxdg                     0.27               pyhd3eb1b0_0
     pyyaml                    6.0             py310h5eee18b_1
     pyzmq                     23.2.0          py310h6a678d5_0
     qdarkstyle                3.0.2              pyhd3eb1b0_0
     qstylizer                 0.2.2           py310h06a4308_0
     qt-main                   5.15.2               h327a75a_7
     qt-webengine              5.15.9               hd2b0992_4
     qtawesome                 1.2.2           py310h06a4308_0
     qtconsole                 5.4.0           py310h06a4308_0
     qtpy                      2.2.0           py310h06a4308_0
     qtwebkit                  5.212                h4eab89a_4
     queuelib                  1.5.0           py310h06a4308_0
     readline                  8.2                  h5eee18b_0
     regex                     2022.7.9        py310h5eee18b_0
     requests                  2.28.1          py310h06a4308_0
     requests-file             1.5.1              pyhd3eb1b0_0
     ripgrep                   13.0.0               hbdeaff8_0
     rope                      1.7.0           py310h06a4308_0
     rtree                     1.0.1           py310h06a4308_0
     ruamel.yaml               0.17.21         py310h5eee18b_0
     ruamel.yaml.clib          0.2.6           py310h5eee18b_1
     ruamel_yaml               0.17.21         py310h5eee18b_0
     scikit-image              0.19.3          py310h6a678d5_1
     scikit-learn              1.2.1           py310h6a678d5_0
     scikit-learn-intelex      2023.0.2        py310h06a4308_0
     scipy                     1.10.0          py310hd5efca6_1
     scrapy                    2.8.0           py310h06a4308_0
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     secretstorage             3.3.1           py310h06a4308_0
     send2trash                1.8.0              pyhd3eb1b0_1
     service_identity          18.1.0             pyhd3eb1b0_1
     setuptools                65.6.3          py310h06a4308_0
     sip                       6.6.2           py310h6a678d5_0
     six                       1.16.0             pyhd3eb1b0_1
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     snappy                    1.1.9                h295c915_0
     sniffio                   1.2.0           py310h06a4308_1
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     sphinxcontrib-applehelp   1.0.2              pyhd3eb1b0_0
     sphinxcontrib-devhelp     1.0.2              pyhd3eb1b0_0
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     sphinxcontrib-serializinghtml 1.1.5              pyhd3eb1b0_0
     spyder                    5.4.1           py310h06a4308_0
     spyder-kernels            2.4.1           py310h06a4308_0
     sqlalchemy                1.4.39          py310h5eee18b_0
     sqlite                    3.40.1               h5082296_0
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     statsmodels               0.13.5          py310ha9d4c09_1
     sympy                     1.11.1          py310h06a4308_0
     tabulate                  0.8.10          py310h06a4308_0
     tbb                       2021.7.0             hdb19cb5_0
     tbb4py                    2021.7.0        py310hdb19cb5_0
     tblib                     1.7.0              pyhd3eb1b0_0
     tenacity                  8.0.1           py310h06a4308_1
     terminado                 0.17.1          py310h06a4308_0
     text-unidecode            1.3                pyhd3eb1b0_0
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     threadpoolctl             2.2.0              pyh0d69192_0
     three-merge               0.1.1              pyhd3eb1b0_0
     tifffile                  2021.7.2           pyhd3eb1b0_2
     tinycss2                  1.2.1           py310h06a4308_0
     tk                        8.6.12               h1ccaba5_0
     tldextract                3.2.0              pyhd3eb1b0_0
     tokenizers                0.11.4          py310h3dcd8bd_1
     toml                      0.10.2             pyhd3eb1b0_0
     tomli                     2.0.1           py310h06a4308_0
     tomlkit                   0.11.1          py310h06a4308_0
     toolz                     0.12.0          py310h06a4308_0
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     tqdm                      4.64.1          py310h06a4308_0
     traitlets                 5.7.1           py310h06a4308_0
     transformers              4.24.0          py310h06a4308_0
     twisted                   22.2.0          py310h5eee18b_1
     typing-extensions         4.4.0           py310h06a4308_0
     typing_extensions         4.4.0           py310h06a4308_0
     tzdata                    2022g                h04d1e81_0
     ujson                     5.4.0           py310h6a678d5_0
     unidecode                 1.2.0              pyhd3eb1b0_0
     unixodbc                  2.3.11               h5eee18b_0
     urllib3                   1.26.14         py310h06a4308_0
     w3lib                     1.21.0             pyhd3eb1b0_0
     watchdog                  2.1.6           py310h06a4308_0
     wcwidth                   0.2.5              pyhd3eb1b0_0
     webencodings              0.5.1           py310h06a4308_1
     websocket-client          0.58.0          py310h06a4308_4
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     wurlitzer                 3.0.2           py310h06a4308_0
     xarray                    2022.11.0       py310h06a4308_0
     xz                        5.2.10               h5eee18b_1
     yaml                      0.2.5                h7b6447c_0
     yapf                      0.31.0             pyhd3eb1b0_0
     zeromq                    4.3.4                h2531618_0
     zfp                       0.5.5                h295c915_6
     zict                      2.1.0           py310h06a4308_0
     zipp                      3.11.0          py310h06a4308_0
     zlib                      1.2.13               h5eee18b_0
     zope                      1.0             py310h06a4308_1
     zope.interface            5.4.0           py310h7f8727e_0
     zstandard                 0.19.0          py310h5eee18b_0
     zstd                      1.5.2                ha4553b6_0
     
</pre></details>

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  • I agree to follow Morpheus' Code of Conduct
  • I have searched the open bugs and have found no duplicates for this bug report
@richardincyberspace richardincyberspace added the bug Something isn't working label Mar 28, 2023
@github-actions github-actions bot added the Needs Triage Need team to review and classify label Mar 28, 2023
@pdmack
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pdmack commented Mar 29, 2023

The pre-requirements for the GNN example were recently updated by #758. Basically, we needed to update the version of cuML in conjunction with some dependency pins identified by the RAPIDS project.
There is a GNN-related issue we are investigating here #810.
Let us know if there are any new issues.

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pdmack commented Apr 19, 2023

Closing this since we believe it's been addressed in the 23.03 release. Please open a new issue if there are further questions.

@pdmack pdmack closed this as completed Apr 19, 2023
@github-project-automation github-project-automation bot moved this from Todo to Done in Morpheus Boards Apr 19, 2023
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