From c782c52f0c2a170032a4e15d982e5936f2c66bfc Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 11:07:00 -0700 Subject: [PATCH 1/7] Drop support for Python 3.9 --- README.md | 2 +- noxfile.py | 2 +- pyproject.toml | 6 +- uv.lock | 467 +------------------------------------------------ 4 files changed, 14 insertions(+), 463 deletions(-) diff --git a/README.md b/README.md index 0489067b..e321f04e 100644 --- a/README.md +++ b/README.md @@ -82,7 +82,7 @@ Visit [our quick start guide](https://earthaccess.readthedocs.io/en/latest/quick ## Compatibility -The _minimum_ supported Python version is **3.9**. +The _minimum_ supported Python version is **3.10**. ## How to Contribute to `earthaccess` diff --git a/noxfile.py b/noxfile.py index f1db1c8c..0f79d18c 100644 --- a/noxfile.py +++ b/noxfile.py @@ -32,7 +32,7 @@ def tests(session: nox.Session) -> None: ) -@nox.session(name="test-min-deps", python="3.9", venv_backend="uv") +@nox.session(name="test-min-deps", python="3.10", venv_backend="uv") def test_min_deps(session: nox.Session) -> None: """Run the unit tests using the lowest compatible version of all direct dependencies.""" session.install("--resolution", "lowest-direct", "--editable", ".[test]") diff --git a/pyproject.toml b/pyproject.toml index 02e7e4d2..a3da4c5d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -26,16 +26,16 @@ classifiers = [ "Operating System :: Microsoft :: Windows", "Operating System :: MacOS", "Operating System :: POSIX :: Linux", - 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The `scripts/integration-test.sh` script has been removed in favor of the `integration-tests` nox session. ([#872](https://github.com/nsidc/earthaccess/issues/872)) ([@jhkennedy](https://github.com/jhkennedy)) +- Python 3.9 is no longer supported. + ([#876](https://github.com/nsidc/earthaccess/pull/876)) + ([@mfisher87](https://github.com/mfisher87)) ### Fixed From df3250eb5a52c4296f39721cb291e969930b79e8 Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 11:25:50 -0700 Subject: [PATCH 3/7] Upgrade h5py to 3.4.0 for Python 3.10 compatibility Remove numpy conditional dependency since h5py is incompatible with numpy<1.26.4 --- pyproject.toml | 6 ++---- uv.lock | 5 ++--- 2 files changed, 4 insertions(+), 7 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index a3da4c5d..53aefb17 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -59,12 +59,10 @@ Changelog = "https://github.com/nsidc/earthaccess/blob/main/CHANGELOG.md" kerchunk = [ "kerchunk", "dask", - "h5py >=3.0", + "h5py >=3.4.0", "h5netcdf", "xarray", - # kerchunk requires numpy, but numpy >=1.26.0 is required for Python 3.12 - "numpy >=1.24.0; python_version < '3.12'", - "numpy >=1.26.0; python_version >= '3.12'", + "numpy >=1.26.4", ] dev = [ "bump-my-version >=0.10.0", diff --git a/uv.lock b/uv.lock index 494ec552..334f5637 100644 --- a/uv.lock +++ b/uv.lock @@ -851,7 +851,7 @@ requires-dist = [ { name = "fsspec", specifier = ">=2022.11" }, { name = "h5netcdf", marker = "extra == 'docs'", specifier = ">=0.11" }, { name = "h5netcdf", marker = "extra == 'kerchunk'" }, - { name = "h5py", marker = "extra == 'kerchunk'", specifier = ">=3.0" }, + { name = "h5py", marker = "extra == 'kerchunk'", specifier = ">=3.4.0" }, { name = "importlib-resources", specifier = ">=6.3.2" }, { name = "ipywidgets", marker = "extra == 'docs'", specifier = ">=7.7.0" }, { name = "jupyterlab", marker = "extra == 'docs'", specifier = ">=3" }, @@ -868,8 +868,7 @@ requires-dist = [ { name = "multimethod", specifier = ">=1.8" }, { name = "mypy", marker = "extra == 'test'", specifier = ">=1.11.2" }, { name = "nox", marker = "extra == 'dev'" }, - { name = "numpy", marker = "python_full_version >= '3.12' and extra == 'kerchunk'", specifier = ">=1.26.0" }, - { name = "numpy", marker = "python_full_version < '3.12' and extra == 'kerchunk'", specifier = ">=1.24.0" }, + { name = "numpy", marker = "extra == 'kerchunk'", specifier = ">=1.26.4" }, { name = "pqdm", specifier = ">=0.1" }, { name = "pre-commit", marker = "extra == 'dev'", specifier = ">=2.4" }, { name = "pygments", marker = "extra == 'docs'", specifier = ">=2.11.1" }, From 9bbdd73cfb2b318be74f287f9f1e1bdcd7e9371e Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 11:29:02 -0700 Subject: [PATCH 4/7] Eliminate duplicate run of test-mindeps workflow on PRs --- .github/workflows/test-mindeps.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/workflows/test-mindeps.yml b/.github/workflows/test-mindeps.yml index a2412708..00a42e9b 100644 --- a/.github/workflows/test-mindeps.yml +++ b/.github/workflows/test-mindeps.yml @@ -2,6 +2,8 @@ name: Unit test minimum dependencies on: push: + branches: + - main pull_request: workflow_dispatch: From 75845c3e35a322e90b3e2513b1baf5da2aaf408f Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 11:53:29 -0700 Subject: [PATCH 5/7] Remove Python 3.9 from test matrices --- .github/workflows/integration-test.yml | 2 +- .github/workflows/test-mindeps.yml | 2 +- .github/workflows/test.yml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/integration-test.yml b/.github/workflows/integration-test.yml index 16583d28..39acb90c 100644 --- a/.github/workflows/integration-test.yml +++ b/.github/workflows/integration-test.yml @@ -49,7 +49,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] + python-version: ["3.10", "3.11", "3.12", "3.13"] fail-fast: false steps: diff --git a/.github/workflows/test-mindeps.yml b/.github/workflows/test-mindeps.yml index 00a42e9b..c6e17967 100644 --- a/.github/workflows/test-mindeps.yml +++ b/.github/workflows/test-mindeps.yml @@ -31,7 +31,7 @@ jobs: - name: Setup nox uses: wntrblm/nox@2024.10.09 with: - python-versions: 3.9 + python-versions: 3.10 - name: Test run: nox -s test-min-deps -- --verbose --cov=earthaccess --cov-report=term-missing --capture=no --tb=native --log-cli-level=INFO diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index e77cf237..fb792360 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -12,7 +12,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] + python-version: ["3.10", "3.11", "3.12", "3.13"] fail-fast: false steps: From a3275289f71c17e46d4fcb94436c1f89fbf14fe2 Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 12:02:45 -0700 Subject: [PATCH 6/7] Quote python version string YAML converts the number `3.10` -> `3.1`. --- .github/workflows/test-mindeps.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/test-mindeps.yml b/.github/workflows/test-mindeps.yml index c6e17967..dc47970b 100644 --- a/.github/workflows/test-mindeps.yml +++ b/.github/workflows/test-mindeps.yml @@ -31,7 +31,7 @@ jobs: - name: Setup nox uses: wntrblm/nox@2024.10.09 with: - python-versions: 3.10 + python-versions: "3.10" - name: Test run: nox -s test-min-deps -- --verbose --cov=earthaccess --cov-report=term-missing --capture=no --tb=native --log-cli-level=INFO From a2a4837bc8f02b0b90de4a4e5d6a48035d8c055b Mon Sep 17 00:00:00 2001 From: Matt Fisher Date: Fri, 8 Nov 2024 14:06:30 -0700 Subject: [PATCH 7/7] Bump h5py to a version with a pre-built wheel for Python 3.10 --- pyproject.toml | 4 +- uv.lock | 2461 +++++++++++++++++++++++++++--------------------- 2 files changed, 1384 insertions(+), 1081 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 53aefb17..1485125c 100644 --- 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