diff --git a/docs/faq.rst b/docs/faq.rst
index 316e639db..002e6a7c7 100644
--- a/docs/faq.rst
+++ b/docs/faq.rst
@@ -307,9 +307,9 @@ Depending on the amount of files and metadata within the BIDS dataset, this proc
 As of the 20.2.0 release, *fMRIPrep* supports the ``--bids-database-dir <database_dir>`` option,
 which can be used to pass in an already indexed BIDS layout.
 
-The default *fMRIPrep* layout can be generated by running the following shell command (requires PyBIDS 0.12.1 or greater)::
+The default *fMRIPrep* layout can be generated by running the following shell command (requires PyBIDS 0.13.2 or greater)::
 
-  pybids layout <bids_root> <database_dir> --no-validate
+  pybids layout <bids_root> <database_dir> --no-validate --index-metadata
 
 where ``<bids_root>`` indicates the root path of the BIDS dataset, and ``<database_dir>``
 is the path where the pre-indexed layout is created - which is then passed into *fMRIPrep*.
@@ -319,7 +319,7 @@ finer control can be achieved of what files are visible to fMRIPrep.
 
 Note that any discrepancies between the pre-indexed database and
 the BIDS dataset complicate the provenance of fMRIPrep derivatives.
-If `--bids-database-dir` is used, the referenced directory should be
+If ``--bids-database-dir`` is used, the referenced directory should be
 preserved for the sake of reporting and reproducibility.
 
 Error in slice timing correction: *insufficient length of BOLD data after discarding nonsteady-states*