From e414cc8f3f3c389556ff8aa108ee9e13e2b7159f Mon Sep 17 00:00:00 2001 From: mirpedrol Date: Mon, 17 Jul 2023 14:31:50 +0200 Subject: [PATCH 1/2] add multiqc to modules.config --- nf_core/pipeline-template/conf/modules.config | 9 +++++++++ 1 file changed, 9 insertions(+) diff --git a/nf_core/pipeline-template/conf/modules.config b/nf_core/pipeline-template/conf/modules.config index da58a5d881..39e8138653 100644 --- a/nf_core/pipeline-template/conf/modules.config +++ b/nf_core/pipeline-template/conf/modules.config @@ -38,4 +38,13 @@ process { ] } + withName: 'MULTIQC' { + ext.args = params.multiqc_title ? "--title \"$params.multiqc_title\"" : '' + publishDir = [ + path: { "${params.outdir}/multiqc" }, + mode: params.publish_dir_mode, + saveAs: { filename -> filename.equals('versions.yml') ? null : filename } + ] + } + } From 7fffb4ba2baa8dd59a80fbb926fedfa428d2ae79 Mon Sep 17 00:00:00 2001 From: mirpedrol Date: Mon, 17 Jul 2023 14:32:55 +0200 Subject: [PATCH 2/2] update changelog --- CHANGELOG.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index a03ba8af70..55dfa2a81d 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,6 +4,8 @@ ### Template +- Add module MULTIQC to modules.config ([#2377](https://github.com/nf-core/tools/pull/2377)) + ### Download - Improved container image resolution and prioritization of http downloads over Docker URIs ([#2364](https://github.com/nf-core/tools/pull/2364)).