From acd19ab4b480c3da272be85a4bcb009533ca293d Mon Sep 17 00:00:00 2001 From: mirpedrol Date: Mon, 21 Nov 2022 14:39:18 +0100 Subject: [PATCH 1/2] change docker_arm by arm --- nf_core/pipeline-template/nextflow.config | 7 +------ 1 file changed, 1 insertion(+), 6 deletions(-) diff --git a/nf_core/pipeline-template/nextflow.config b/nf_core/pipeline-template/nextflow.config index 92e3c48396..77f6841fac 100644 --- a/nf_core/pipeline-template/nextflow.config +++ b/nf_core/pipeline-template/nextflow.config @@ -110,12 +110,7 @@ profiles { shifter.enabled = false charliecloud.enabled = false } - docker_arm { - docker.enabled = true - singularity.enabled = false - podman.enabled = false - shifter.enabled = false - charliecloud.enabled = false + arm { docker.runOptions = '-u $(id -u):$(id -g) --platform=linux/amd64' } singularity { From 9a9b8d3b63405d500515d8fe5ab295dba465dd60 Mon Sep 17 00:00:00 2001 From: mirpedrol Date: Mon, 21 Nov 2022 14:48:07 +0100 Subject: [PATCH 2/2] modify changelog --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 5a424f1ec5..07000cce58 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -8,7 +8,7 @@ - Add codespaces template ([#1957](https://github.com/nf-core/tools/pull/1957)) - Check that the workflow name provided with a template doesn't contain dashes ([#1822](https://github.com/nf-core/tools/pull/1822)) - `nextflow run --version` will now print the workflow version from the manifest and exit ([#1951](https://github.com/nf-core/tools/pull/1951)) -- Add profile for running `docker` with the ARM chips (including Apple silicon). +- Add profile for running `docker` with the ARM chips (including Apple silicon) ([#1942](https://github.com/nf-core/tools/pull/1942) and [#2034](https://github.com/nf-core/tools/pull/2034)) ### Linting