From 9be57f0013514203dcb4a55cab3bbc5a4add9b4a Mon Sep 17 00:00:00 2001
From: luisas <luisa.santus95@gmail.com>
Date: Thu, 12 Dec 2024 17:13:30 +0100
Subject: [PATCH] update configuaration

---
 conf/test.config            | 2 +-
 conf/test_full.config       | 4 ++--
 conf/test_parameters.config | 2 +-
 conf/test_pdb.config        | 2 +-
 conf/test_small.config      | 2 +-
 5 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/conf/test.config b/conf/test.config
index a9e1502c..ee9cf66c 100644
--- a/conf/test.config
+++ b/conf/test.config
@@ -35,6 +35,6 @@ params {
     build_consensus = true
 
     // Input data
-    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.0/samplesheet_test_af2.csv'
+    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.1/samplesheet_test_af2.csv'
     tools = params.pipelines_testdata_base_path + 'multiplesequencealign/toolsheet/v1.0/toolsheet_full.csv'
 }
diff --git a/conf/test_full.config b/conf/test_full.config
index 83154c7c..2ee5ec7e 100644
--- a/conf/test_full.config
+++ b/conf/test_full.config
@@ -13,7 +13,7 @@ process {
     resourceLimits = [
         cpus: 4,
         memory: '15.GB',
-        time: 4.h'
+        time: '4.h'
     ]
 }
 
@@ -36,6 +36,6 @@ params {
     build_consensus = true
 
     // Input data for full size test
-    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.0/samplesheet_full.csv'
+    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.1/samplesheet_full.csv'
     tools = params.pipelines_testdata_base_path + 'multiplesequencealign/toolsheet/v1.0/toolsheet_full.csv'
 }
diff --git a/conf/test_parameters.config b/conf/test_parameters.config
index 2eded35e..51e37ae0 100644
--- a/conf/test_parameters.config
+++ b/conf/test_parameters.config
@@ -25,6 +25,6 @@ params {
     skip_compression = false
 
     // Input data
-    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.0/samplesheet_test_af2.csv'
+    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.1/samplesheet_test_af2.csv'
     tools = params.pipelines_testdata_base_path + 'multiplesequencealign/toolsheet/v1.0/toolsheet_full.csv'
 }
diff --git a/conf/test_pdb.config b/conf/test_pdb.config
index b958bd67..f55ddf7f 100644
--- a/conf/test_pdb.config
+++ b/conf/test_pdb.config
@@ -33,6 +33,6 @@ params {
     calc_tcs           = false
 
     // Input data
-    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.0/samplesheet_test.csv'
+    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.1/samplesheet_test.csv'
     tools = params.pipelines_testdata_base_path + 'multiplesequencealign/toolsheet/v1.0/toolsheet_structural.csv'
 }
diff --git a/conf/test_small.config b/conf/test_small.config
index 7ee4fc78..956900a8 100644
--- a/conf/test_small.config
+++ b/conf/test_small.config
@@ -35,6 +35,6 @@ params {
     build_consensus = true
 
     // Input data for full size test
-    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.0/samplesheet_test_af2.csv'
+    input = params.pipelines_testdata_base_path + 'multiplesequencealign/samplesheet/v1.1/samplesheet_test_af2.csv'
     tools = params.pipelines_testdata_base_path + 'multiplesequencealign/toolsheet/v1.0/toolsheet_small.csv'
 }