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Error in if (!(layer %in% slotNames(x = object))) { : argument is of length zero #32

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Eunice0519 opened this issue Feb 19, 2024 · 1 comment
Open

Error in if (!(layer %in% slotNames(x = object))) { : argument is of length zero #32

Eunice0519 opened this issue Feb 19, 2024 · 1 comment

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@Eunice0519
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I got this error when I try to run calculate_auc.

Error in if (!(layer %in% slotNames(x = object))) { :
argument is of length zero

Does this have something to do with the updated version of Seurat? As Augur is unable to identify the data columns.
@AlanTeoYueYang
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Hi Eunice,

I managed to make Augur run with the Seurat 5.0.1 with just a warning message.
Can you share with me your data so I can see what might be the issue?
Thanks.

Best,
Alan

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@AlanTeoYueYang @Eunice0519