diff --git a/backend/Dockerfile b/backend/Dockerfile index 907ce47..7977ab7 100644 --- a/backend/Dockerfile +++ b/backend/Dockerfile @@ -18,10 +18,10 @@ RUN set -eux && \ apt-get update && \ apt-get install -y \ build-essential \ - # to install poetry curl \ - # to install psycopg2 - libpq-dev python3-dev + libpq-dev \ + python3-dev \ + libmagic1 # https://python-poetry.org/docs/master/#installing-with-the-official-installer RUN curl -sSL https://install.python-poetry.org | python - @@ -42,4 +42,4 @@ EXPOSE 8000 ### FROM base as development -ENTRYPOINT ["bash", "./scripts/local_entry_point.sh"] \ No newline at end of file +ENTRYPOINT ["bash", "./scripts/local_entry_point.sh"] diff --git a/backend/db/models.py b/backend/db/models.py index 9025668..1d75eb2 100644 --- a/backend/db/models.py +++ b/backend/db/models.py @@ -6,7 +6,6 @@ from sqlalchemy.dialects.postgresql import JSONB, UUID from sqlalchemy.ext.declarative import declarative_base from sqlalchemy.orm import Session, relationship, sessionmaker -from sqlalchemy.sql import func from server.settings import get_postgres_url diff --git a/backend/poetry.lock b/backend/poetry.lock index ec9f429..c3dd234 100644 --- a/backend/poetry.lock +++ b/backend/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand. 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files = [ - {file = "urllib3-2.2.0-py3-none-any.whl", hash = "sha256:ce3711610ddce217e6d113a2732fafad960a03fd0318c91faa79481e35c11224"}, - {file = "urllib3-2.2.0.tar.gz", hash = "sha256:051d961ad0c62a94e50ecf1af379c3aba230c66c710493493560c0c223c49f20"}, + {file = "urllib3-2.2.1-py3-none-any.whl", hash = "sha256:450b20ec296a467077128bff42b73080516e71b56ff59a60a02bef2232c4fa9d"}, + {file = "urllib3-2.2.1.tar.gz", hash = "sha256:d0570876c61ab9e520d776c38acbbb5b05a776d3f9ff98a5c8fd5162a444cf19"}, ] [package.extras] @@ -4684,20 +4700,20 @@ test = ["mypy", "pre-commit", "pytest", "pytest-asyncio", "websockets (>=10.0)"] [[package]] name = "zipp" -version = "3.17.0" +version = "3.18.1" description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.8" files = [ - {file = "zipp-3.17.0-py3-none-any.whl", hash = "sha256:0e923e726174922dce09c53c59ad483ff7bbb8e572e00c7f7c46b88556409f31"}, - {file = "zipp-3.17.0.tar.gz", hash = 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"pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] [metadata] lock-version = "2.0" python-versions = "^3.8.1" -content-hash = "adb5aa5abbe85ad9a450118e1c91fdd578c187076b102e586315705fe0a241ae" +content-hash = "97f9563925d6adad46c479d89608f654f02042464536f3693bcc4adf0d5b137e" diff --git a/backend/pyproject.toml b/backend/pyproject.toml index 9d11f37..1b1a70c 100644 --- a/backend/pyproject.toml +++ b/backend/pyproject.toml @@ -14,7 +14,7 @@ fastapi = "^0.109.2" langserve = "^0.0.45" uvicorn = "^0.27.1" pydantic = "^1.10" -langchain-openai = "^0.0.6" +langchain-openai = "^0.0.8" jsonschema = "^4.21.1" sse-starlette = "^2.0.0" alembic = "^1.13.1" diff --git a/backend/server/api/suggest.py b/backend/server/api/suggest.py new file mode 100644 index 0000000..fd5f8ad --- /dev/null +++ b/backend/server/api/suggest.py @@ -0,0 +1,111 @@ +"""Module to handle the suggest API endpoint. + +This is logic that leverages LLMs to suggest an extractor for a given task. +""" +from typing import Optional + +from fastapi import APIRouter +from langchain_core.prompts import ChatPromptTemplate +from pydantic import BaseModel, Field + +from server.settings import get_model + +router = APIRouter( + prefix="/suggest", + tags=["Suggest an extractor"], + responses={404: {"description": "Not found"}}, +) + + +model = get_model() + + +class SuggestExtractor(BaseModel): + """A request to create an extractor.""" + + description: str = Field( + default="", + description=( + "Short description of what information the extractor is extracting." + ), + ) + jsonSchema: Optional[str] = Field( + default=None, + description=( + "Existing JSON Schema that describes the entity / " + "information that should be extracted." + ), + ) + + +class ExtractorDefinition(BaseModel): + """Define an information extractor to be used in an information extraction system.""" # noqa: E501 + + json_schema: str = Field( + ..., + description=( + "JSON Schema that describes the entity / " + "information that should be extracted. " + "This schema is specified in JSON Schema format. " + ), + ) + + +SUGGEST_PROMPT = ChatPromptTemplate.from_messages( + [ + ( + "system", + "You are are an expert ontologist and have been asked to help a user " + "define an information extractor.The user will describe an entity, " + "a topic or a piece of information that they would like to extract from " + "text. Based on the user input, you are to provide a schema and " + "description for the extractor. The schema should be a JSON Schema that " + "describes the entity or information to be extracted. information to be " + "extracted. Make sure to include title and description for all the " + "attributes in the schema.The JSON Schema should describe a top level " + "object. The object MUST have a title and description.Unless otherwise " + "stated all entity properties in the schema should be considered optional.", + ), + ("human", "{input}"), + ] +) + +suggestion_chain = SUGGEST_PROMPT | model.with_structured_output( + schema=ExtractorDefinition +) + +UPDATE_PROMPT = ChatPromptTemplate.from_messages( + [ + ( + "system", + "You are are an expert ontologist and have been asked to help a user " + "define an information extractor.gThe existing extractor schema is " + "provided.\ng```\n{json_schema}\n```\nThe user will describe a desired " + "modification to the schema (e.g., adding a new field, changing a field " + "type, etc.).Your goal is to provide a new schema that incorporates the " + "user's desired modification.The user may also request a completely new " + "schema, in which case you should provide a new schema based on the " + "user's input, and ignore the existing schema.The JSON Schema should " + "describe a top level object. The object MUST have a title and " + "description.Unless otherwise stated all entity properties in the schema " + "should be considered optional.", + ), + ("human", "{input}"), + ] +) + +UPDATE_CHAIN = UPDATE_PROMPT | model.with_structured_output(schema=ExtractorDefinition) + + +# PUBLIC API + + +@router.post("") +async def suggest(request: SuggestExtractor) -> ExtractorDefinition: + """Endpoint to create an extractor.""" + if len(request.jsonSchema) > 10: + print(f"Using update chain with {request.jsonSchema}") + return await UPDATE_CHAIN.ainvoke( + {"input": request.description, "json_schema": request.jsonSchema} + ) + return await suggestion_chain.ainvoke({"input": request.description}) diff --git a/backend/server/main.py b/backend/server/main.py index 917533f..934ba11 100644 --- a/backend/server/main.py +++ b/backend/server/main.py @@ -4,7 +4,7 @@ from fastapi.middleware.cors import CORSMiddleware from langserve import add_routes -from server.api import examples, extract, extractors +from server.api import examples, extract, extractors, suggest from server.extraction_runnable import ( ExtractRequest, ExtractResponse, @@ -23,7 +23,6 @@ ], ) - origins = [ "http://localhost:5173", ] @@ -46,6 +45,7 @@ def ready(): app.include_router(extractors.router) app.include_router(examples.router) app.include_router(extract.router) +app.include_router(suggest.router) add_routes( app, diff --git a/backend/tests/integration_tests/test_extraction.py b/backend/tests/integration_tests/test_extraction.py index 86ddb59..dfc6b02 100644 --- a/backend/tests/integration_tests/test_extraction.py +++ b/backend/tests/integration_tests/test_extraction.py @@ -78,7 +78,7 @@ class Person(BaseModel): json={ "input": { "text": text, - "schema": Person.schema(), + "schema": Person(), "instructions": "Redact all names using the characters `######`", "examples": examples, }