diff --git a/Pipfile b/Pipfile index 7403ca4e..98151633 100644 --- a/Pipfile +++ b/Pipfile @@ -4,44 +4,41 @@ verify_ssl = true name = "pypi" [packages] -fastapi = "==0.110.0" -uvicorn = {version = "==0.29.0", extras = ["standard"]} +fastapi = "==0.112.1" +uvicorn = {version = "==0.30.6", extras = ["standard"]} jsonlines = "==4.0.0" cacheout = "==0.16.0" -aiohttp = "==3.9.3" -requests = "==2.31.0" +aiohttp = "==3.10.3" +requests = "==2.32.3" jinja-cli = "==1.2.2" -pandas = "==2.2.1" +pandas = "==2.2.2" ftputil = "==5.1.0" beautifulsoup4 = "==4.12.3" -jsonschema = "==4.21.1" +jsonschema = "==4.23.0" apscheduler = "==3.10.4" -file-read-backwards = "==3.0.0" +file-read-backwards = "==3.1.0" aiodns = "==3.2.0" -docker = "==7.0.0" +docker = "==7.1.0" click = "==8.1.7" -PyYAML = "==6.0.1" +PyYAML = "==6.0.2" python-dateutil = "==2.9.0.post0" -numpy = "==1.26.4" +numpy = "==2.0.1" jsonschema-default = "==1.6.0" mergedeep = "==1.3.4" httpx = "==0.27.0" requests-toolbelt = "==1.0.0" [dev-packages] -# Installing 8.0.0 currently causes a conflict -# I'm guessing one of the pytest-*s has a requirement of <8 -# but haven't checked -pytest = "==7.4.4" -coverage = "==7.4.4" +pytest = "==8.3.2" +coverage = "==7.6.1" pytest-cov = "==5.0.0" -ipython = "==8.23.0" -pytest-asyncio = "==0.23.6" +ipython = "==8.26.0" +pytest-asyncio = "==0.23.8" # currently for design/experiments/store_mongo.py -pymongo = "==4.6.3" -sourmash = "==4.8.7" +pymongo = "==4.8.0" +sourmash = "==4.8.11" prometheus-client = "==0.20.0" -pyqt5 = "==5.15.10" +pyqt5 = "==5.15.11" [requires] python_version = "3.11" diff --git a/Pipfile.lock b/Pipfile.lock index ab47582b..84f18c3b 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "7c156b66bce6623b3cf32fc71db8bb9acb6698cb9a3e1fa8873e450e8d5fb781" + "sha256": "75018eac1a10153ad9c2164bf95cfc19d54acb08c6639ba11cc4f1fbdd0c1c20" }, "pipfile-spec": 6, "requires": { @@ -24,88 +24,96 @@ "index": "pypi", "version": 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