From 754d68e8bcb00d6f327561d374b875738b78383b Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Thu, 26 Oct 2023 15:16:23 +0100 Subject: [PATCH 01/53] update test --- tests/example_collate.txt | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/tests/example_collate.txt b/tests/example_collate.txt index d07d224..55e69be 100644 --- a/tests/example_collate.txt +++ b/tests/example_collate.txt @@ -1,7 +1,7 @@ -sample main_lineage sub_lineage DR_type region_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid pyrazinamide ethambutol streptomycin fluoroquinolones moxifloxacin ofloxacin levofloxacin ciprofloxacin aminoglycosides amikacin kanamycin capreomycin ethionamide para-aminosalicylic_acid cycloserine linezolid bedaquiline clofazimine delamanid -por5A_illumina_bwa_freebayes_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - -por5A_illumina_bwa_gatk_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - -por5A_illumina_bwa_bcftools_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - -por5A_illumina_bwa_pilon_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - -por5A_illumina_bwa_lofreq_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - -por5_vcf lineage4 lineage4.3.4.2 MDR-TB NA NA NA 7 23 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr pncA_p.Val125Gly embB_p.Met306Val, embB_p.Met423Thr gid_p.Ala80Pro - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - - +sample main_lineage sub_lineage DR_type region_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid ethambutol pyrazinamide streptomycin fluoroquinolones moxifloxacin ofloxacin levofloxacin ciprofloxacin aminoglycosides amikacin capreomycin kanamycin cycloserine ethionamide clofazimine para-aminosalicylic_acid delamanid bedaquiline linezolid +por5A_illumina_bwa_freebayes_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +por5A_illumina_bwa_gatk_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +por5A_illumina_bwa_bcftools_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +por5A_illumina_bwa_pilon_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +por5A_illumina_bwa_lofreq_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +por5_vcf lineage4 lineage4.3.4.2 MDR-TB NA NA NA 7 23 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - From c50f7bbcf4f35f2a1a6cb301c8267feafd00a5b0 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 18:34:44 -0500 Subject: [PATCH 02/53] confirm to new pathogen-profiler reformatting --- tbprofiler/reformat.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/tbprofiler/reformat.py b/tbprofiler/reformat.py index ba51455..cf7fb4d 100644 --- a/tbprofiler/reformat.py +++ b/tbprofiler/reformat.py @@ -119,7 +119,11 @@ def reformat(results,conf,mutation_metadata=False,use_suspect=False): results["qc"]["missing_positions"] = pp.reformat_missing_genome_pos(results["qc"]["missing_positions"],conf) if "barcode" in results: results = barcode2lineage(results) - results = pp.reformat_annotations(results,conf,) + # results = pp.reformat_annotations(results,conf,) + results = pp.process_variants(results,conf,['drug_resistance']) + results['dr_variants'] = results['drug_resistance_variants'] + del results['drug_resistance_variants'] + results['dr_variants'] = pp.add_drugs_to_variants(results['dr_variants']) results = add_drtypes(results) results["db_version"] = conf["version"] if mutation_metadata: From db367c7c3f2134e26ad30891fbbe423f39c3b4b8 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 18:35:42 -0500 Subject: [PATCH 03/53] add coverage tools selection --- tb-profiler | 1 + 1 file changed, 1 insertion(+) diff --git a/tb-profiler b/tb-profiler index 3b381c2..0c178af 100644 --- a/tb-profiler +++ b/tb-profiler @@ -352,6 +352,7 @@ algorithm.add_argument('--mapper',default="bwa", choices=["bwa","minimap2","bowt algorithm.add_argument('--caller',default="freebayes", choices=["bcftools","gatk","freebayes","pilon","lofreq"],help="Variant calling tool to use.",type=str) algorithm.add_argument('--calling_params',type=str,help='Override default parameters for variant calling') algorithm.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") +algorithm.add_argument('--coverage_tool',default='samtools',choices=["samtools","bedtools"],type=str,help="Kmer counter") algorithm.add_argument('--suspect',action="store_true",help="Use the suspect suite of tools to add ML predictions") algorithm.add_argument('--spoligotype',action="store_true",help="Perform in-silico spoligotyping") algorithm.add_argument('--update_phylo',action="store_true",help="Update phylogeny using usher (experimental feature)") From 6fb038fe2d2f6d2d673318410a234028f3776327 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 18:37:16 -0500 Subject: [PATCH 04/53] remove rules --- tbprofiler/rules.py | 14 -------------- 1 file changed, 14 deletions(-) delete mode 100644 tbprofiler/rules.py diff --git a/tbprofiler/rules.py b/tbprofiler/rules.py deleted file mode 100644 index 2ea40b8..0000000 --- a/tbprofiler/rules.py +++ /dev/null @@ -1,14 +0,0 @@ -import logging -import importlib.util - - -def apply_rules(conf,results): - spec = importlib.util.spec_from_file_location("tbprofiler.rules", conf['rules']) - rules = importlib.util.module_from_spec(spec) - spec.loader.exec_module(rules) - - rule_names = [k for k in vars(rules) if k[0]!="_"] - for r in rule_names: - logging.info(f"Applying rule: {r}") - results = vars(rules)[r](results) - From e477f00782df1c24d2021e568e1eb1dae431265a Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 18:42:20 -0500 Subject: [PATCH 05/53] Fix for #316 --- tbprofiler/spoligotyping.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tbprofiler/spoligotyping.py b/tbprofiler/spoligotyping.py index 83afa06..24989f2 100644 --- a/tbprofiler/spoligotyping.py +++ b/tbprofiler/spoligotyping.py @@ -8,14 +8,14 @@ def spoligotype(args): elif args.read1: result = fq2spoligotype(r1=args.read1,r2=args.read2,files_prefix=args.files_prefix,conf=args.conf,threads=args.threads,max_mem=args.ram,kmer_counter=args.kmer_counter) elif args.fasta: - result = fa2spoligotype(args.fasta,args.files_prefix,args.conf,threads=args.threads,max_mem=args.ram,kmer_counter=args.kmer_counter) + result = fa2spoligotype(args.fasta,args.files_prefix,args.conf,threads=args.threads,max_mem=args.ram,counter=args.kmer_counter) ann = get_spoligotype_annotation(result["octal"],args.conf['spoligotype_annotations']) result.update(ann) return result def fa2spoligotype(fasta,files_prefix,conf,threads=1,max_mem=2,counter="kmc"): fasta = pp.Fasta(fasta) - kmers = fasta.get_kmer_counts(files_prefix,klen=25,threads=threads,max_mem=max_mem,kmer_counter=kmer_counter) + kmers = fasta.get_kmer_counts(files_prefix,klen=25,threads=threads,max_mem=max_mem,counter=counter) counts = kmers.load_kmer_counts(conf['spoligotype_spacers']) binary,octal = counts2spoligotype(counts,cutoff=1) return {"binary":binary_to_unicode(binary),"octal":octal,"spacers":counts} From a5615bea67dcd194e456f7d53d74b42e575720fe Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 18:50:21 -0500 Subject: [PATCH 06/53] Fix for #316 --- tb-profiler | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/tb-profiler b/tb-profiler index 0c178af..e9e9a7b 100644 --- a/tb-profiler +++ b/tb-profiler @@ -143,10 +143,7 @@ def main_profile(args): ] - ### TEST ### - if "rules" in args.conf: - tbp.apply_rules(args.conf,results) - ### END ### + ### Move files to respective directories ### result_files = { From 2660a50f76863fc3eca4bb4831a9a72f42b578bc Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 10 Dec 2023 19:37:42 -0500 Subject: [PATCH 07/53] remove rules --- tbprofiler/reformat.py | 19 +++---------------- 1 file changed, 3 insertions(+), 16 deletions(-) diff --git a/tbprofiler/reformat.py b/tbprofiler/reformat.py index cf7fb4d..99852a8 100644 --- a/tbprofiler/reformat.py +++ b/tbprofiler/reformat.py @@ -93,21 +93,7 @@ def variant_present(var,results): if (v['gene']==var['gene'] or v['locus_tag']==var['gene']) and v['type']==var['type']: result = v return result - -def apply_rules(results,conf): - if 'rules' not in conf: - return - for r in conf['rules']: - if r['type']=='interaction': - if r['interaction']=="negate": - - if variant_present(r['var1'],results) and (v:=variant_present(r['var2'],results)): - results['dr_variants'].remove(v) - results['other_variants'].append(v) - if 'note' in r: - results['notes'].append(r['note']) - - + def reformat(results,conf,mutation_metadata=False,use_suspect=False): results["notes"] = [] results["variants"] = [x for x in results["variants"] if len(x["consequences"])>0] @@ -119,11 +105,12 @@ def reformat(results,conf,mutation_metadata=False,use_suspect=False): results["qc"]["missing_positions"] = pp.reformat_missing_genome_pos(results["qc"]["missing_positions"],conf) if "barcode" in results: results = barcode2lineage(results) - # results = pp.reformat_annotations(results,conf,) + results = pp.process_variants(results,conf,['drug_resistance']) results['dr_variants'] = results['drug_resistance_variants'] del results['drug_resistance_variants'] results['dr_variants'] = pp.add_drugs_to_variants(results['dr_variants']) + results['qc_fail_variants'] = pp.add_drugs_to_variants(results['qc_fail_variants']) results = add_drtypes(results) results["db_version"] = conf["version"] if mutation_metadata: From 7048c458a4de3935e062e9b8fc47bc6fce58fa07 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Mon, 29 Jan 2024 07:59:52 +0000 Subject: [PATCH 08/53] update tests --- tests/example_collate.txt | 14 ++--- tests/run_test.py | 123 ++++++++++++++------------------------ 2 files changed, 53 insertions(+), 84 deletions(-) diff --git a/tests/example_collate.txt b/tests/example_collate.txt index 55e69be..cfa7382 100644 --- a/tests/example_collate.txt +++ b/tests/example_collate.txt @@ -1,7 +1,7 @@ -sample main_lineage sub_lineage DR_type region_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid ethambutol pyrazinamide streptomycin fluoroquinolones moxifloxacin ofloxacin levofloxacin ciprofloxacin aminoglycosides amikacin capreomycin kanamycin cycloserine ethionamide clofazimine para-aminosalicylic_acid delamanid bedaquiline linezolid -por5A_illumina_bwa_freebayes_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - -por5A_illumina_bwa_gatk_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - -por5A_illumina_bwa_bcftools_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - -por5A_illumina_bwa_pilon_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - -por5A_illumina_bwa_lofreq_PE lineage4 lineage4.3.4.2 MDR-TB 53.5 99.65 69876 7 17 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - -por5_vcf lineage4 lineage4.3.4.2 MDR-TB NA NA NA 7 23 rpoB_p.Ser450Leu fabG1_c.-15C>T, inhA_p.Ile194Thr embB_p.Met306Val, embB_p.Met423Thr pncA_p.Val125Gly gid_p.Ala80Pro - - - - - - - - - - fabG1_c.-15C>T, inhA_p.Ile194Thr - - - - - +sample main_lineage sub_lineage spoligotype drtype target_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid ethambutol pyrazinamide streptomycin fluoroquinolones moxifloxacin ofloxacin levofloxacin ciprofloxacin aminoglycosides amikacin capreomycin kanamycin cycloserine ethionamide clofazimine para-aminosalicylic_acid delamanid bedaquiline linezolid +por5A_bcftools lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +por5A_freebayes lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +por5A_gatk lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 28 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +por5A_lofreq lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 23 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +por5A_pilon lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 25 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +por5_vcf lineage4 lineage4.3.4.2 - MDR-TB nan nan nan 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - diff --git a/tests/run_test.py b/tests/run_test.py index fa6f274..090a4d1 100644 --- a/tests/run_test.py +++ b/tests/run_test.py @@ -2,6 +2,7 @@ import pathogenprofiler as pp import json import os +import pytest collate_text = open("example_collate.txt").read() @@ -12,103 +13,71 @@ if not os.path.isdir("tb-profiler-test-data"): run_cmd("git clone https://github.com/jodyphelan/tb-profiler-test-data.git") +# por5_dr_variants = [ +# ('rpoB', 'p.Ser450Leu'), +# ('fabG1', 'c.-15C>T'), +# ('inhA', 'p.Ile194Thr'), +# ('pncA', 'p.Val125Gly'), +# ('embB', 'p.Met306Val'), +# ('embB', 'p.Met423Thr'), +# ('gid', 'p.Ala80Pro') +# ] + por5_dr_variants = [ ('rpoB', 'p.Ser450Leu'), - ('fabG1', 'c.-15C>T'), - ('inhA', 'p.Ile194Thr'), + ('inhA', 'c.-777C>T'), ('pncA', 'p.Val125Gly'), ('embB', 'p.Met306Val'), - ('embB', 'p.Met423Thr'), - ('gid', 'p.Ala80Pro') ] - def test_db(): - run_cmd("tb-profiler update_tbdb") - - + run_cmd("tb-profiler update_tbdb --branch test") -def illumina_fastq(caller,mapper): - run_cmd(f"tb-profiler profile -1 tb-profiler-test-data/por5A.reduced_1.fastq.gz -2 tb-profiler-test-data/por5A.reduced_2.fastq.gz --spoligotype --mapper {mapper} --caller {caller} -p por5A_illumina_{mapper}_{caller}_PE -t 4 --txt --csv ") - results = json.load(open(f"results/por5A_illumina_{mapper}_{caller}_PE.results.json")) - return results +db = 'whov2' -def illumina_fastq_single(caller,mapper): - run_cmd(f"tb-profiler profile -1 tb-profiler-test-data/por5A.reduced_1.fastq.gz --spoligotype --mapper {mapper} --caller {caller} -p por5A_illumina_{mapper}_{caller}_SE -t 4 --txt --csv ") - results = json.load(open(f"results/por5A_illumina_{mapper}_{caller}_SE.results.json")) - return results +def check_assertations(filename): + results = json.load(open(filename)) + assert results["sub_lineage"] == "lineage4.3.4.2" + assert results["main_lineage"] == "lineage4" + assert [(v["gene_name"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants -def test_bwa_freebayes(): - results = illumina_fastq("freebayes","bwa") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants -def test_bwa_bcftools(): - results = illumina_fastq("bcftools","bwa") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants +def test_fastq(): + run_cmd(f"tb-profiler profile --db {db} -1 tb-profiler-test-data/por5A.reduced_1.fastq.gz -2 tb-profiler-test-data/por5A.reduced_2.fastq.gz -p por5A_fastq -t 4 --txt --csv ") + check_assertations("results/por5A_fastq.results.json") -def test_bwa_gatk(): - results = illumina_fastq("gatk","bwa") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants +variant_callers = ['bcftools','freebayes','gatk','lofreq','pilon'] +@pytest.mark.parametrize("caller",variant_callers) +def test_variant(caller): + run_cmd(f"tb-profiler profile --db {db} -a bam/por5A_fastq.bam --caller {caller} -p por5A_{caller} -t 4 --txt --csv ") + check_assertations(f"results/por5A_{caller}.results.json") -def test_bwa_pilon(): - results = illumina_fastq("pilon","bwa") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants - -def test_bwa_lofreq(): - results = illumina_fastq("lofreq","bwa") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"] if v["freq"]>0.05] == por5_dr_variants +def test_vcf1(): + run_cmd(f"tb-profiler profile --db {db} -v tb-profiler-test-data/por5A1.vcf.gz --prefix por5_vcf --txt --csv") + check_assertations("results/por5_vcf.results.json") + +def test_nanopore(): + run_cmd(f"tb-profiler profile --db {db} -1 tb-profiler-test-data/por5A.nanopore_reduced.fastq.gz --platform nanopore -p por5A_illumina_nanopore -t 4 --af '0.5,0.7' --depth '0,5' --txt --csv ") + check_assertations("results/por5A_illumina_nanopore.results.json") +def test_fasta(): + run_cmd(f"tb-profiler profile --db {db} -f tb-profiler-test-data/por5A1.fasta -p por5A_fasta --txt --csv") + results = json.load(open('results/por5A_fasta.results.json')) + assert results["sub_lineage"] == "lineage4.3.4.2" + assert results["main_lineage"] == "lineage4" + assert set([(v["gene_name"],v["change"]) for v in results["dr_variants"]]) - set([('fbiC','c.2565_*117del')]) == set(por5_dr_variants) -def test_vcf1(): - run_cmd("tb-profiler profile -v tb-profiler-test-data/por5A1.vcf.gz --prefix por5_vcf --txt --csv") - results = json.load(open("results/por5_vcf.results.json")) - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert len(results["dr_variants"]) == 7 - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants def test_collate(): with open("samples.txt","w") as O: - O.write("\n".join(["por5A_illumina_bwa_freebayes_PE","por5A_illumina_bwa_gatk_PE","por5A_illumina_bwa_bcftools_PE","por5A_illumina_bwa_pilon_PE","por5A_illumina_bwa_lofreq_PE","por5_vcf"])) - run_cmd("tb-profiler collate --samples samples.txt") + for caller in variant_callers: + O.write(f"por5A_{caller}\n") + O.write("por5_vcf\n") + run_cmd(f"tb-profiler collate --db {db} --samples samples.txt") assert open("tbprofiler.txt").read() == collate_text -def test_minimap2_freebayes(): - results = illumina_fastq("freebayes","minimap2") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants - -def test_bwa_freebayes_single(): - results = illumina_fastq_single("freebayes","minimap2") - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants -def test_nanopore(): - run_cmd("tb-profiler profile -1 tb-profiler-test-data/por5A.nanopore_reduced.fastq.gz --platform nanopore -p por5A_illumina_nanopore -t 4 --af '0.5,0.7' --depth '0,5' --txt --csv ") - results = json.load(open("results/por5A_illumina_nanopore.results.json")) - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants - -def test_fasta(): - run_cmd("tb-profiler profile -f tb-profiler-test-data/por5A1.fasta -p por5A_fasta --txt --csv") - results = json.load(open("results/por5A_fasta.results.json")) - assert results["sublin"] == "lineage4.3.4.2" - assert results["main_lin"] == "lineage4" - assert [(v["gene"],v["change"]) for v in results["dr_variants"]] == por5_dr_variants -def test_seqs_from_bam(): - assert pp.get_seqs_from_bam("bam/por5A_illumina_nanopore.bam") == ['Chromosome'] \ No newline at end of file +# def test_seqs_from_bam(): +# assert pp.get_seqs_from_bam("bam/por5A_illumina_nanopore.bam") == ['Chromosome'] \ No newline at end of file From 573b65546c1c576c2bb74604fb37a0ad4e6d8bbb Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Mon, 29 Jan 2024 08:09:42 +0000 Subject: [PATCH 09/53] update tests --- tests/run_test.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/run_test.py b/tests/run_test.py index 090a4d1..5f85d71 100644 --- a/tests/run_test.py +++ b/tests/run_test.py @@ -52,7 +52,7 @@ def test_variant(caller): run_cmd(f"tb-profiler profile --db {db} -a bam/por5A_fastq.bam --caller {caller} -p por5A_{caller} -t 4 --txt --csv ") check_assertations(f"results/por5A_{caller}.results.json") -def test_vcf1(): +def test_vcf(): run_cmd(f"tb-profiler profile --db {db} -v tb-profiler-test-data/por5A1.vcf.gz --prefix por5_vcf --txt --csv") check_assertations("results/por5_vcf.results.json") From 6d2a80831f1af6e3f490d0e97a87003f4339084e Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 15:22:50 +0000 Subject: [PATCH 10/53] too many updates --- scripts/tb-profiler-tools | 2 +- tb-profiler | 111 +++++---- tbprofiler/__init__.py | 3 +- tbprofiler/collate.py | 452 +++++++++++++++++++----------------- tbprofiler/models.py | 97 ++++++++ tbprofiler/output.py | 19 +- tbprofiler/phylo.py | 15 +- tbprofiler/reformat.py | 245 ++++++++++++++----- tbprofiler/snp_dists.py | 154 ++++++------ tbprofiler/spoligotyping.py | 4 +- tbprofiler/text.py | 122 ++++------ tbprofiler/utils.py | 10 + 12 files changed, 749 insertions(+), 485 deletions(-) create mode 100644 tbprofiler/models.py diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index d14562e..a31de67 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -20,7 +20,7 @@ def main_phylogeny(args): # cleanup(args.files_prefix) def prepare_usher(args): - tbp.phylotree.prepare_usher(args) + tbp.phylo.prepare_usher(args) argparser = argparse.ArgumentParser(description='TBProfiler pipeline',formatter_class=argparse.ArgumentDefaultsHelpFormatter) diff --git a/tb-profiler b/tb-profiler index e9e9a7b..4d4786b 100644 --- a/tb-profiler +++ b/tb-profiler @@ -17,6 +17,7 @@ from tqdm import tqdm import logging from rich.logging import RichHandler + __softwarename__ = 'tbprofiler' @atexit.register @@ -81,7 +82,7 @@ def multisample_vcf_run(args): def main_profile(args): - args.conf['variant_filters'] = pp.get_variant_filters(args) + pp.process_args(args) if args.vcf: nsamples = len(tbp.get_vcf_samples(args.vcf)) @@ -93,32 +94,56 @@ def main_profile(args): os.mkdir(args.dir) + tbp.process_tb_profiler_args(args) - args = pp.set_platform_params(args) + variants_profile = pp.run_profiler(args) + if 'rules' in args.conf: + rules_applied = pp.apply_rules(args.conf['rules'], variants_profile) + else: + rules_applied = [] - if args.snp_dist or args.update_phylo: - args.call_whole_genome = True + tbp.clean_up_duplicate_annotations(variants_profile) + # Convert variant objects to DrVariant if they cause resistance + for var in variants_profile: + var.convert_to_dr_element() - if args.no_lineage: - del args.conf["barcode"] - results = { - "id":args.prefix, - "tbprofiler_version": tbp.__version__ - } + if args.call_lineage: + barcode_result = tbp.barcode2lineage(pp.run_barcoder(args)) - results.update(pp.run_profiler(args)) if args.spoligotype: - if args.vcf: - pp.warninglog("Spoligotyping not available with vcf format... skipping!") - else: - results["spoligotype"] = tbp.spoligotype(args) + spoligotype = tbp.spoligotype(args) + else: + spoligotype = None + + if args.data_source in ('bam','fastq'): + qc = pp.run_bam_qc(args) + elif args.data_source=="fasta": + qc = pp.run_fasta_qc(args) + else: + qc = pp.run_vcf_qc(args) + + notes = [] + for rule in rules_applied: + notes.append(f"Rule applied: {rule}") + + result = tbp.create_resistance_result( + args = args, + notes=notes, + lineage=barcode_result, + spoligotype=spoligotype, + variants=variants_profile, + qc=qc + ) + if args.snp_dist: + tbp.run_snp_dists(args,result) + tbp.update_neighbour_snp_dist_output(args,result) + + if args.update_phylo: + tbp.phylo.usher_add_sample(args) - ### Reformat the results to TB-Profiler style ### - results = tbp.reformat(results, args.conf, mutation_metadata=args.add_mutation_metadata,use_suspect=args.suspect) - results["id"] = args.prefix ### Create folders for results if they don't exist ### if pp.nofolder(d:=args.dir+"/bam") and args.read1: @@ -128,27 +153,16 @@ def main_profile(args): if pp.nofolder(d:=args.dir+"/results"): os.mkdir(d) - if args.bam_for_depth: - args.bam = args.bam_for_depth - - if args.snp_dist: - tbp.run_snp_dists(args,results) - - if args.update_phylo: - tbp.usher_add_sample(args) - results["pipeline"] = [ - {"Analysis":"Mapping","Program":args.read1 if not args.bam else "N/A"}, - {"Analysis":"Variant calling","Program":args.caller} - ] + tbp.write_outputs(args,result) - ### Move files to respective directories ### + # ### Move files to respective directories ### result_files = { - "%s.delly.bcf" % args.files_prefix: "%s/vcf/%s.delly.bcf" % (args.dir,args.prefix), - "%s.targets.csq.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.csq.vcf.gz" % (args.dir,args.prefix), + + "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.csq.vcf.gz" % (args.dir,args.prefix), "%s.vcf.gz" % args.files_prefix: "%s/vcf/%s.vcf.gz" % (args.dir,args.prefix), "%s.bam" % args.files_prefix: "%s/bam/%s.bam" % (args.dir,args.prefix), "%s.bam.bai" % args.files_prefix: "%s/bam/%s.bam.bai" % (args.dir,args.prefix), @@ -158,12 +172,9 @@ def main_profile(args): if os.path.isfile(file): shutil.move(file,target) - pp.run_cmd("rm %s*" % args.files_prefix) + if not args.no_clean: + pp.run_cmd("rm %s*" % args.files_prefix) - tbp.write_outputs(args,results,template_file=args.text_template) - if args.snp_dist: - tbp.update_neighbour_snp_dist_output(args,results) - pp.logging.info("[green]Profiling finished sucessfully![/]",extra={"markup": True}) @@ -192,7 +203,7 @@ def main_create_db(args): extra_files = { "spoligotype_spacers": args.spoligotypes, "spoligotype_annotations": args.spoligotype_annotations, - "bedmask": {"name":args.bedmask,"convert":1} + "bedmask": {"name":args.bedmask,"convert":1}, } if args.barcode: extra_files["barcode"] = args.barcode @@ -247,16 +258,16 @@ def main_spoligotype(args): tbp.write_outputs(args,results,template_file=args.text_template) def main_collate(args): - tbp.collate_results(args.prefix,args.conf,sample_file=args.samples,result_dirs=args.dir,mark_missing=args.mark_missing) + tbp.collate_results(args) def main_version(args): sys.stdout.write("tb-profiler version %s\n" % tbp.__version__) def main_reformat(args): - - results = json.load(open(args.json)) - args.prefix = results["id"] - tbp.write_outputs(args,results,template_file=args.text_template) + data = json.load(open(args.json)) + result = tbp.ProfileResult(**data) + args.prefix = result.id + tbp.write_outputs(args,result,template_file=args.text_template) def main_batch(args): if args.args==None: @@ -358,8 +369,8 @@ algorithm.add_argument('--snp_dist',type=int,help="Store variant set and get all algorithm.add_argument('--snp_diff_db',type=str,help=argparse.SUPPRESS) algorithm.add_argument('--snp_diff_no_store',action='store_true',help=argparse.SUPPRESS) algorithm.add_argument('--no_trim',action="store_true",help="Don't trim files using trimmomatic") -algorithm.add_argument('--no_flagstat',action="store_true",help="Don't collect flagstats") -algorithm.add_argument('--no_clip',action="store_false",help="Don't clip reads") +algorithm.add_argument('--no_coverage_qc',action="store_true",help="Don't collect flagstats") +algorithm.add_argument('--no_samclip',action="store_false",help="Don't remove clipped reads from variant calling") algorithm.add_argument('--no_delly',action="store_true",help="Don't run delly") algorithm.add_argument('--no_lineage',action="store_true",help=argparse.SUPPRESS) algorithm.add_argument('--add_variant_annotations',action="store_true",help=argparse.SUPPRESS) @@ -425,10 +436,12 @@ parser_sub.set_defaults(func=main_spoligotype) parser_sub = subparsers.add_parser('collate', help='Collate results form multiple samples together', formatter_class=ArgumentDefaultsRichHelpFormatter) parser_sub.add_argument('--prefix','-p',default="tbprofiler",help='Sample prefix') parser_sub.add_argument('--samples',help='File with samples (one per line)') +parser_sub.add_argument('--itol',action="store_true",help='Generate itol config files') parser_sub.add_argument('--full',action="store_true",help='Output mutations in main result file') parser_sub.add_argument('--all_variants',action="store_true",help='Output all variants in variant matrix') parser_sub.add_argument('--mark_missing',action="store_true",help='An asteriks will be use to mark predictions which are affected by missing data at a drug resistance position') parser_sub.add_argument('--db',default='tbdb',help='Full path to mutation database json file to use') +parser_sub.add_argument('--format',default='txt',choices=['txt','csv'],help='Format of the output') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',nargs="+",default=["results"],help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) @@ -457,8 +470,8 @@ parser_sub.set_defaults(func=main_reformat) parser_sub = subparsers.add_parser('create_db', help='Generate the files required to run tb-profiler', formatter_class=ArgumentDefaultsRichHelpFormatter) parser_sub.add_argument('--prefix','-p',default="tbdb",type=str,help='The input CSV file containing the mutations') -parser_sub.add_argument('--csv','-c',default="tbdb.csv",type=str,help='The prefix for all output files') -parser_sub.add_argument('--watchlist','-w',default="tbdb.watchlist.csv",type=str,help='A csv file containing genes to profile but without any specific associated mutations') +parser_sub.add_argument('--csv','-c',default="mutations.csv",type=str,help='The prefix for all output files') +parser_sub.add_argument('--watchlist','-w',default="watchlist.csv",type=str,help='A csv file containing genes to profile but without any specific associated mutations') parser_sub.add_argument('--spoligotypes',default="spoligotype_spacers.txt",type=str,help='A file containing a list of spoligotype spacers') parser_sub.add_argument('--spoligotype_annotations',default="spoligotype_list.csv") parser_sub.add_argument('--barcode',default="barcode.bed",type=str,help='A bed file containing lineage barcode SNPs') @@ -466,7 +479,6 @@ parser_sub.add_argument('--bedmask',default="mask.bed",type=str,help='A bed file parser_sub.add_argument('--rules',type=str,help='A file containing python rules') parser_sub.add_argument('--amplicon_primers',type=str,help='A file containing a list of amplicon primers') parser_sub.add_argument('--match_ref',type=str,help='The prefix for all output files') -parser_sub.add_argument('--other_annotations',default="tbdb.other_annotations.csv",type=str,help="A CSV containing gene, mutation, drug and confidence columns") parser_sub.add_argument('--custom',action="store_true",help='Tells the script this is a custom database, this is used to alter the generation of the version file') parser_sub.add_argument('--db_name',help='Overrides the name of the database in the version file') parser_sub.add_argument('--db_commit',help='Overrides the commit string of the database in the version file') @@ -541,6 +553,7 @@ logging.basicConfig( if hasattr(args, 'func'): args.software_name = __softwarename__ + args.version = tbp.__version__ args.tmp_prefix = str(uuid4()) args.files_prefix = os.path.abspath(f"{args.temp}/{args.tmp_prefix}") if hasattr(args,'dir'): diff --git a/tbprofiler/__init__.py b/tbprofiler/__init__.py index d6ea102..bac0dc0 100644 --- a/tbprofiler/__init__.py +++ b/tbprofiler/__init__.py @@ -6,6 +6,5 @@ from .output import * from .snp_dists import * from .phylo import * -from .rules import * -__version__ = "5.0.1" +__version__ = "5.1.0" diff --git a/tbprofiler/collate.py b/tbprofiler/collate.py index 1cfbb37..3d95cfe 100644 --- a/tbprofiler/collate.py +++ b/tbprofiler/collate.py @@ -5,235 +5,263 @@ from .utils import get_lt2drugs import logging import csv +import argparse +from .models import ProfileResult +from typing import List, Tuple, Optional +from itol_config.interfaces import ColourStripConfigWriter, BinaryDataConfigWriter +from pydantic import BaseModel -def get_common_fields(rows): - cols = set(rows[0].keys()) - orders = {} - for r in rows: - cols = cols.intersection(set(r.keys())) - for i,c in enumerate(r): - orders[c] = i - return sorted(cols,key=lambda x:orders[x]) +class VariantDB: + def __init__(self, json_db: Optional[dict] = None): + self.samples2variants = defaultdict(set) + self.variant2samples = defaultdict(set) + self.variant_frequencies = {} + self.samples = list() + self.variant_rows = [] + if json_db: + for gene in json_db: + for mutation in json_db[gene]: + self.variant2samples[(gene,mutation)] = set() -def get_field_values(rows,cols): - new_rows = [] - for r in rows: - new_rows.append({c:r.get(c,None) for c in cols}) - return new_rows + def add_result(self, result: ProfileResult) -> None: + self.samples.append(result.id) + for var in result.dr_variants + result.other_variants: + key = (result.id,var.gene_name,var.change) + self.variant_frequencies[key] = var.freq + key = (var.gene_name,var.change) + self.variant2samples[key].add(result.id) + self.samples2variants[result.id].add(key) + d = var.model_dump() + d['sample'] = result.id + self.variant_rows.append(d) + def get_frequency(self,key: Tuple[str,str,str]) -> float: + return self.variant_frequencies.get(key,0.0) + def get_variant_list(self) -> List[Tuple[str,str]]: + return list(self.variant2samples.keys()) + def write_dump(self,filename: str) -> None: + with open(filename,"w") as O: + fields = ["sample","gene_name","change","freq","type"] + writer = csv.DictWriter(O,fieldnames=fields) + writer.writeheader() + for row in self.variant_rows: + d = {k:row[k] for k in fields} + writer.writerow(d) +class TransmissionEdge(BaseModel): + source: str + target: str + distance: float + + def dump(self): + return {"source":self.source,"target":self.target,"properties":{"distance":self.distance}} + + def __eq__(self, __value: object) -> bool: + if isinstance(__value, TransmissionEdge): + if set([self.source, self.target]) == set([__value.source, __value.target]) and self.distance == __value.distance: + return True + return False + def __hash__(self): + sorted_samples = sorted([self.source,self.target]) + return hash((type(self),sorted_samples[0],sorted_samples[1],self.distance) ) -def collate_results(prefix,conf,result_dirs=["./results"],sample_file=None,full_results=True,full_variant_results=True,mark_missing=False,sep="\t"): - for d in result_dirs: +def collate_results(args: argparse.Namespace) -> None: + """ + Collate results from tbprofiler + + Arguments + --------- + args : argparse.Namespace + Arguments from argparse + """ + for d in args.dir: if not os.path.isdir(d): logging.error("\nERROR: Can't find directory %s\n" % d ) exit() - set_all_drugs = set() - for l in open(conf["bed"]): - arr = l.rstrip().split() - for d in arr[5].split(","): - set_all_drugs.add(d) - # tmp_drugs = ["rifampicin", "isoniazid", "pyrazinamide", "ethambutol", "streptomycin", "fluoroquinolones", "moxifloxacin", "ofloxacin", "levofloxacin", "ciprofloxacin", "aminoglycosides", "amikacin", "kanamycin", "capreomycin", "ethionamide", "para-aminosalicylic_acid", "cycloserine", "linezolid"] - drug_list = conf['drugs'] - # for d in tmp_drugs: - # if d in set_all_drugs: - # drug_list.append(d) - # for d in sorted(list(set_all_drugs)): - # if d not in drug_list: - # drug_list.append(d) - + + drugs = args.conf['drugs'] samples = {} - for d in result_dirs: + for d in args.dir: for f in os.listdir(f"{d}/"): if f.endswith(".results.json"): - s = f[:-13] + s = f.replace(".results.json","") samples[s] = f'{d}/{s}.results.json' + + if args.samples: + samples = {s:samples[s] for s in [l.strip() for l in open(args.samples)]} - if sample_file: - samples = {s:samples[s] for s in [l.strip() for l in open(sample_file)]} - - results = defaultdict(dict) - result_rows = [] - dr_variants = defaultdict(lambda:defaultdict(dict)) - dr_variants_set = set() - dr_drugs = {} - sample_dr_mutations_set = defaultdict(set) - sample_other_mutations_set = defaultdict(set) - for s in samples: - for d in drug_list: - results[s][d] = set() - lt2drugs = get_lt2drugs(conf["bed"]) - - tmp_edges = set() + rows = [] + edges = [] + variant_db = VariantDB(args.conf['json_db']) for s in tqdm(samples): - res = {"sample":s} - dr_drugs[s] = set() - temp = json.load(open(samples[s])) - - missing_drugs = set() - if "missing_positions" in temp["qc"]: - missing_genes = [x["locus_tag"] for x in temp["qc"]["missing_positions"] if "drugs" in x] - for locus_tag in missing_genes: - missing_drugs = missing_drugs.union(set(lt2drugs[locus_tag])) - - - for x in temp["dr_variants"]: - dr_variants[x["gene"]][x["change"]][s] = x["freq"] - sample_dr_mutations_set[s].add((x["gene"],x["change"])) - dr_variants_set.add((x["gene"],x["change"])) - for d in x["drugs"]: - dr_drugs[s].add(d["drug"]) - results[s][d["drug"]].add("%s_%s" % (x["gene"],x["change"]) if full_results else "R") - for x in temp["other_variants"]: - sample_other_mutations_set[s].add((x["gene"],x["change"])) - - res["main_lineage"] = results[s]["main_lin"] = temp["main_lin"] - res["sub_lineage"] = results[s]["sublin"] = temp["sublin"] - if "spoligotype" in temp: - res["spoligotype"] = temp["spoligotype"]["octal"] - res["DR_type"] = results[s]["drtype"] = temp["drtype"] - res["region_median_depth"] = results[s]["region_median_depth"] = temp["qc"].get("region_median_depth","NA") - res["pct_reads_mapped"] = temp["qc"].get("pct_reads_mapped","NA") - res["num_reads_mapped"] = temp["qc"].get("num_reads_mapped","NA") - res["num_dr_variants"] = len(sample_dr_mutations_set[s]) - res["num_other_variants"] = len(sample_other_mutations_set[s]) - for d in drug_list: - results[s][d] = ", ".join(sorted(results[s][d])) if len(results[s][d])>0 else "-" - if mark_missing and d in missing_drugs: - res[d] = "*%s" % results[s][d] - else: - res[d] = results[s][d] - result_rows.append(res) - - - if "close_samples" in temp: - for d in temp['close_samples']: - sorted_samples = sorted([s,d['sample']]) - tmp_edges.add((sorted_samples[0],sorted_samples[1],d['distance'])) - - with open(prefix+".txt","w") as OUT: - fields = get_common_fields(result_rows) - writer = csv.DictWriter(OUT,fieldnames=fields,delimiter=sep) + data = json.load(open(samples[s])) + res = ProfileResult(**data) + variant_db.add_result(res) + + row = { + "sample":s, + "main_lineage":res.main_lineage, + "sub_lineage":res.sub_lineage, + "spoligotype":res.spoligotype.octal if res.spoligotype else "-", + "drtype":res.drtype, + "target_median_depth":res.qc.get_target_median_depth(), + "pct_reads_mapped":res.qc.get_percent_reads_mapped(), + "num_reads_mapped":res.qc.get_reads_mapped(), + "num_dr_variants":len(res.dr_variants), + "num_other_variants":len(res.other_variants), + } + for d in drugs: + variants = [var.get_str() for var in res.dr_variants if d in var.get_drugs()] + row[d] = ", ".join(sorted(variants)) if len(variants)>0 else "-" + + if args.mark_missing: + drug_missing_variants = set() + for var in res.qc.missing_positions: + for ann in var.annotation: + if ann["type"]=="drug_resistance": + drug_missing_variants.add(ann['drug']) + for d in drug_missing_variants: + row[d] = "*%s" % row[d] + + rows.append(row) + + for linked_sample in res.linked_samples: + edges.append( + TransmissionEdge( + source=s, + target=linked_sample.sample, + distance=linked_sample.distance + ) + ) + + + if args.format=="txt": + args.sep = "\t" + else: + args.sep = "," + + outfile = f'{args.prefix}.{args.format}' + with open(outfile,"w") as O: + writer = csv.DictWriter(O,fieldnames=list(rows[0]),delimiter=args.sep) writer.writeheader() - writer.writerows(get_field_values(result_rows,fields)) - - if full_variant_results: - - all_vars = conf["json_db"] - lt2gene = {} - for l in open(conf["bed"]): - #Chromosome 5240 7267 Rv0005 gyrB FLUOROQUINOLONES - row = l.rstrip().split() - lt2gene[row[3]] = row[4] if row[4]!="." else row[3] - for gene in all_vars: - for mutation in all_vars[gene]: - dr_variants_set.add((lt2gene[gene],mutation)) - VAR = open(prefix+".variants.txt","w") - VAR.write("sample\t%s\n" % ("\t".join(["%s_%s" % (g,c) for g,c in sorted(dr_variants_set,key=lambda x: x[0])]))) - for s in samples: - VAR.write("%s\t%s\n" % (s,"\t".join(["%.3f" % dr_variants[gene][change][s] if gene in dr_variants and change in dr_variants[gene] and s in dr_variants[gene][change] else "0" for gene,change in sorted(dr_variants_set,key=lambda x: x[0])]))) - VAR.close() - - # OUT = - # OUT.write("sample\tmain_lineage\tsub_lineage\tDR_type\tpct_reads_mapped\tnum_reads_mapped\tmedian_coverage\tnum_dr_variants\tnum_other_variants\t%s" % "\t".join(drug_list)+"\n") - # for s in samples: - - # OUT.write("%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\n" %(s,results[s]["main_lin"],results[s]["sublin"],results[s]["drtype"],results[s]["pct_reads_mapped"],results[s]["num_reads_mapped"],results[s]["median_coverage"],results[s]["num_dr_variants"],results[s]["num_other_variants"],"\t".join([results[s][x] for x in drug_list]))) - # OUT.close() - json.dump(dict(results),open(prefix+".json","w")) - - - - lineage_cols = {"lineage1":"#104577","lineage2":"#ab2323","lineage3":"#18a68c","lineage4":"#f68e51","lineage5":"#7cb5d2","lineage6":"#fde05e","lineage7":"#bc94b7","lineage8":"#ccc9e7","lineage9":"#bd9391","Animal strains":"#f8e0c8","Other":"#000000"} + writer.writerows(rows) + + if args.itol: + generate_itol_config(rows,drugs,args.prefix) + + generate_transmission_network(rows,edges,args.prefix) + generate_distance_matrix(rows,edges,args.prefix) + generate_variant_matrix(variant_db,args.prefix) + + variant_db.write_dump(f'{args.prefix}.variants.csv') + + +def generate_itol_config(rows: List[dict], drugs: list, prefix: str) -> None: + """ + Generate itol configuration files + + Arguments + --------- + rows : List[dict] + List of dictionaries containing results + drugs : list + List of drugs + prefix : str + Prefix for output files + """ + all_lineage_cols = {"lineage1":"#104577","lineage2":"#ab2323","lineage3":"#18a68c","lineage4":"#f68e51","lineage5":"#7cb5d2","lineage6":"#fde05e","lineage7":"#bc94b7","lineage8":"#ccc9e7","lineage9":"#bd9391","Animal strains":"#f8e0c8","Other":"#000000"} lineage_aggregation = {"M.caprae":"Animal strains","M.bovis":"Animal strains","M.orygis":"Animal strains"} - lineages_present = set([lineage_aggregation.get(results[s]["main_lin"],results[s]["main_lin"]) if ";" not in results[s]["main_lin"] else "Other" for s in samples]) - lineage_cols = {key:val for key,val in lineage_cols.items() if key in lineages_present} - OUT = open(prefix+".lineage.itol.txt","w") - OUT.write("""DATASET_COLORSTRIP -SEPARATOR TAB -DATASET_LABEL\tLineage -COLOR\t#ff0000 - -LEGEND_TITLE\tLineage -LEGEND_SHAPES\t%s -LEGEND_LABELS\t%s -LEGEND_COLORS\t%s - -DATA -""" % ("\t".join(["1" for _ in lineage_cols]),"\t".join(list([x.title() for x in lineage_cols.keys()])), "\t".join(list(lineage_cols.values())))) - for s in samples: - OUT.write("%s\t%s\n" % (s,lineage_cols.get(lineage_aggregation.get(results[s]["main_lin"],results[s]["main_lin"]),"#000000"))) - OUT.close() - - OUT = open(prefix+".dr.itol.txt","w") - dr_cols = {"Sensitive":"#28a745","RR-TB":"#007bff","HR-TB":"#E0ACD5","MDR-TB":"#ffc107","Pre-XDR-TB":"#dc3545","XDR-TB":"#343a40","Other":"#f8f9fa"} - drtypes_present = set([results[s]["drtype"] for s in samples]) - dr_cols = {key:val for key,val in dr_cols.items() if key in drtypes_present} - OUT.write("""DATASET_COLORSTRIP -SEPARATOR TAB -DATASET_LABEL\tDrug-Resistance -COLOR\t#ff0000 - -LEGEND_TITLE\tDrug resistance - -LEGEND_SHAPES\t%s -LEGEND_LABELS\t%s -LEGEND_COLORS\t%s - - -DATA -""" % ("\t".join(["1" for _ in dr_cols]),"\t".join(list(dr_cols.keys())), "\t".join(list(dr_cols.values())))) - for s in samples: - OUT.write("%s\t%s\n" % (s,dr_cols.get(results[s]["drtype"],"#000000"))) - OUT.close() - - drug_list = ['rifampicin', 'isoniazid', 'ethambutol', 'pyrazinamide', 'streptomycin', 'fluoroquinolones', 'aminoglycosides', 'kanamycin', 'amikacin', 'capreomycin', 'ethionamide', 'para-aminosalicylic_acid', 'clofazimine', 'linezolid', 'bedaquiline', 'delamanid'] - OUT = open(prefix+".dr.indiv.itol.txt","w") - # dr_cols = {"Sensitive":"#80FF00","Drug-resistant":"#00FFFF","MDR":"#8000FF","XDR":"#FF0000"} - legend_shapes = "\t".join(["2" for x in drug_list]) - legend_colours = "\t".join(["black" for x in drug_list]) - legend_labels = "\t".join(drug_list) - OUT.write("""DATASET_BINARY -SEPARATOR TAB -DATASET_LABEL\tDrugs -COLOR\t#ff0000 - -SHOW_LABELS\t1 -FIELD_SHAPES\t%s -FIELD_COLORS\t%s -FIELD_LABELS\t%s - -DATA -""" % (legend_shapes,legend_colours,legend_labels)) - for s in samples: - OUT.write("%s\t%s\n" % (s,"\t".join(["1" if d in dr_drugs[s] else "0" for d in drug_list]))) - OUT.close() - - if len(tmp_edges)>0: + lineage_dict = {r['sample']:lineage_aggregation.get(r["main_lineage"],r["main_lineage"]) if ";" not in r["main_lineage"] else "Other" for r in rows} + lineages_present = set(lineage_dict.values()) + lineage_cols = {key:val for key,val in all_lineage_cols.items() if key in lineages_present} + lineage_outfile = f'{prefix}.lineage.itol.txt' + writer = ColourStripConfigWriter(lineage_dict,'Main Lineage',lineage_cols) + writer.write(lineage_outfile) + + all_dr_cols = {"Sensitive":"#28a745","RR-TB":"#007bff","HR-TB":"#E0ACD5","MDR-TB":"#ffc107","Pre-XDR-TB":"#dc3545","XDR-TB":"#343a40","Other":"#f8f9fa"} + dr_data = {row['sample']:row['drtype'] for row in rows} + drtypes_present = set(dr_data.values()) + dr_cols = {key:val for key,val in all_dr_cols.items() if key in drtypes_present} + drtypeoutfile = f'{prefix}.dr.itol.txt' + writer = ColourStripConfigWriter(dr_data,'Drug Resistance',dr_cols) + writer.write(drtypeoutfile) + + drug_binary_data = {row['sample']:{drug:1 if row[drug]!="-" else 0 for drug in drugs} for row in rows} + drug_binary_outfile = f'{prefix}.dr.indiv.itol.txt' + writer = BinaryDataConfigWriter(drug_binary_data,'Drug Resistance') + writer.write(drug_binary_outfile) + +def generate_transmission_network(rows: List[dict], edges: List[TransmissionEdge], prefix: str) -> None: + """ + Generate transmission network in tjson format + + Arguments + --------- + rows : List[dict] + List of dictionaries containing results + edges : List[TransmissionEdge] + List of edges in transmission network + prefix : str + Prefix for output files + """ + row_lookup = {r['sample']:r for r in rows} + if len(edges)>0: tmp_nodes = set() - edges = [] + json_edges = [] - for i,e in enumerate(tmp_edges): - if e[0] in results and e[1] in results: - tmp_nodes.add(e[0]) - tmp_nodes.add(e[1]) - edges.append({"source":e[0],"target":e[1],"properties":{"distance":e[2]}}) + for e in edges: + if e.source in row_lookup and e.target in row_lookup: + tmp_nodes.add(e.source) + tmp_nodes.add(e.target) + json_edges.append(e.dump()) nodes = [] for n in tmp_nodes: - nodes.append({"id":n,"properties":{"drtype":results[n]["drtype"],"lineage":results[n]["main_lin"],"median_depth":results[n]["region_median_depth"]}}) - json.dump({"nodes":nodes,"edges":edges},open(prefix+".transmission_graph.json","w")) - - with open(prefix+".distance_matrix.txt","w") as MAT: - MAT.write("samples\t%s\n" % "\t".join(samples)) - transformed_edges = {} - for e in tmp_edges: - transformed_edges[(e[0],e[1])] = e[2] - for si in samples: - row = [si] - for sj in samples: - ss = tuple(sorted([si,sj])) - if si==sj: - row.append("0") - else: - row.append(str(transformed_edges[ss]) if ss in transformed_edges else "NA") - MAT.write("%s\n" % "\t".join(row)) \ No newline at end of file + nodes.append( + { + "id":n, + "properties": { + "drtype":row_lookup[n]["drtype"], + "lineage":row_lookup[n]["main_lineage"], + "median_depth":row_lookup[n]["target_median_depth"] + } + } + ) + json.dump({"nodes":nodes,"edges":json_edges},open(prefix+".transmission_graph.json","w")) + +def generate_distance_matrix(rows: List[dict], edges: List[TransmissionEdge], prefix: str) -> None: + """ + Generate distance matrix for transmission network + + Arguments + --------- + rows : List[dict] + List of dictionaries containing results + edges : List[TransmissionEdge] + List of edges in transmission network + prefix : str + Prefix for output files + """ + samples = [r['sample'] for r in rows] + with open(prefix+".distance_matrix.txt","w") as MAT: + MAT.write("samples\t%s\n" % "\t".join(samples)) + transformed_edges = {} + for e in edges: + transformed_edges[(e.source,e.target)] = e.distance + for si in samples: + row = [si] + for sj in samples: + ss = tuple(sorted([si,sj])) + if si==sj: + row.append("0.0") + else: + row.append(str(transformed_edges[ss]) if ss in transformed_edges else "NA") + MAT.write("%s\n" % "\t".join(row)) + + +def generate_variant_matrix(variant_db: VariantDB, prefix: str) -> None: + variant_list = variant_db.get_variant_list() + with open(prefix+".variants.txt","w") as VAR: + VAR.write("sample\t%s\n" % ("\t".join(["%s_%s" % (g,c) for g,c in variant_list]))) + for s in variant_db.samples: + VAR.write("%s\t%s\n" % (s,"\t".join(["%.3f" % variant_db.get_frequency((s,gene,change)) for gene,change in variant_list]))) + diff --git a/tbprofiler/models.py b/tbprofiler/models.py new file mode 100644 index 0000000..a0f717e --- /dev/null +++ b/tbprofiler/models.py @@ -0,0 +1,97 @@ +from pydantic import BaseModel, Field +from typing import Optional, List, Union +from pathogenprofiler import object_list2text +from pathogenprofiler.models import BamQC, FastaQC, VcfQC, Variant, DrVariant +from datetime import datetime + + + +class Lineage(BaseModel): + """ + A class to hold information about a lineage + + Attributes + ---------- + fraction : float + Fraction of reads belonging to this lineage + lineage : str + Name of the lineage + family : str + Family names associated with the lineage + rd : Optional[str] + RDs associated with the lineage + """ + fraction: float + lineage: str + family: str + rd: Optional[str] = None + + +class Result(BaseModel): + """ + A class to hold information about a TBProfiler result + + Attributes + ---------- + id : str + Sample ID + timestamp : datetime + Time of analysis + tbprofiler_version : str + TBProfiler version + db_version : dict + TBProfiler database version + """ + id: str + timestamp: datetime = Field(default_factory=datetime.now) + tbprofiler_version: str + db_version: dict + +class TbDrVariant(DrVariant): + locus_tag: str + gene_associated_drugs: List[str] = [] + +class TbVariant(Variant): + locus_tag: str + gene_associated_drugs: List[str] = [] + +class Spacer(BaseModel): + name: str + seq: str + count: int + +class Spoligotype(BaseModel): + binary: str + octal: str + family: str + SIT: str + countries: str + spacers: List[Spacer] + + def __repr__(self) -> str: + return self.octal + +class LinkedSample(BaseModel): + sample: str + distance: float + positions: List[int] + +class ProfileResult(Result): + notes: List[str] = [] + lineage: Optional[List[Lineage]] = [] + main_lineage: str = None + sub_lineage: str = None + spoligotype: Optional[Spoligotype] = None + drtype: str + dr_variants: List[TbDrVariant] = [] + other_variants: List[TbVariant] = [] + qc_fail_variants: List[Union[TbDrVariant,TbVariant]] = [] + qc: Union[BamQC, FastaQC, VcfQC] + linked_samples: List[LinkedSample] = [] + + def get_qc(self): + if isinstance(self.qc, (BamQC, FastaQC)): + text = object_list2text(l = self.qc.target_qc) + else: + text = "Not available for VCF input" + return text diff --git a/tbprofiler/output.py b/tbprofiler/output.py index f2d24de..073ab06 100644 --- a/tbprofiler/output.py +++ b/tbprofiler/output.py @@ -1,34 +1,27 @@ from .text import write_text -# from .pdf import write_pdf from .docx import write_docx from datetime import datetime import logging import json -import tbprofiler as tbp +from .models import ProfileResult -def write_outputs(args,results,template_file = None): +def write_outputs(args,result: ProfileResult,template_file: str = None): logging.info("Writing outputs") json_output = args.dir+"/results/"+args.prefix+".results.json" text_output = args.dir+"/results/"+args.prefix+".results.txt" csv_output = args.dir+"/results/"+args.prefix+".results.csv" docx_output = args.dir+"/results/"+args.prefix+".results.docx" - # tree_output = args.dir+"/results/"+args.prefix+".results.nwk" - - if "add_columns" not in vars(args): - args.add_columns = None - extra_columns = [x.lower() for x in args.add_columns.split(",")] if args.add_columns else [] - results["timestamp"] = datetime.now().strftime("%d-%m-%Y %H:%M:%S") logging.info(f"Writing json file: {json_output}") - json.dump(results,open(json_output,"w")) + open(json_output,"w").write(result.model_dump_json(indent=4)) if args.txt: logging.info(f"Writing text file: {text_output}") - write_text(results,args.conf,text_output,extra_columns,sep="\t",template_file=template_file) + write_text(result,args.conf,text_output,sep="\t",template_file=template_file) if args.csv: logging.info(f"Writing csv file: {csv_output}") - write_text(results,args.conf,csv_output,extra_columns,sep=",",template_file = template_file) + write_text(result,args.conf,csv_output,sep=",",template_file = template_file) if args.docx: logging.info(f"Writing docx file: {docx_output}") - write_docx(results,args.conf,docx_output,template_file = args.docx_template) \ No newline at end of file + write_docx(result,args.conf,docx_output,template_file = args.docx_template) \ No newline at end of file diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 67d974f..71647d6 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -8,8 +8,9 @@ from uuid import uuid4 import sys from pathogenprofiler import run_cmd, cmd_out +import argparse -def usher_add_sample(args): +def usher_add_sample(args: argparse.Namespace) -> None: logging.info(f"Adding sample to phylogeny") @@ -44,7 +45,7 @@ def usher_add_sample(args): run_cmd("mv %(tmp_output_phylo)s %(input_phylo)s " % vars(args)) os.chdir(cwd) -def generate_low_dp_mask(bam,ref,outfile,min_dp = 10): +def generate_low_dp_mask(bam: str,ref: str,outfile: str,min_dp: int = 10) -> None: missing_positions = [] ok_positions = set() for l in cmd_out(f"samtools depth {bam}"): @@ -62,10 +63,10 @@ def generate_low_dp_mask(bam,ref,outfile,min_dp = 10): for x in missing_positions: O.write(f"{x[0]}\t{x[1]}\t{x[1]+1}\n") -def prepare_usher(treefile,vcf_file): +def prepare_usher(treefile: str,vcf_file: str) -> None: run_cmd(f"usher --tree {treefile} --vcf {vcf_file} --collapse-tree --save-mutation-annotated-tree phylo.pb") -def prepare_sample_consensus(sample,input_vcf,args): +def prepare_sample_consensus(sample: str,input_vcf: str,args: argparse.Namespace) -> str: s = sample tmp_vcf = f"{args.files_prefix}.{s}.vcf.gz" run_cmd(f"bcftools norm -m - {input_vcf} | bcftools view -T ^{args.conf['bedmask']} | bcftools filter --SnpGap 50 | annotate_maaf.py | bcftools filter -S . -e 'MAAF<0.7' |bcftools filter -S . -e 'FMT/DP<20' | rename_vcf_sample.py --sample-name {s} | bcftools view -v snps -Oz -o {tmp_vcf}") @@ -76,7 +77,7 @@ def prepare_sample_consensus(sample,input_vcf,args): run_cmd(f"bcftools consensus --sample {s} -m {mask_bed} -M N -f {args.conf['ref']} {tmp_vcf} | sed 's/>/>{s} /' > {args.files_prefix}.{s}.consensus.fa") return f"{args.files_prefix}.{s}.consensus.fa" -def get_consensus_vcf(sample,input_vcf,args): +def get_consensus_vcf(sample: str,input_vcf: str,args: argparse.Namespace) -> str: consensus_file = prepare_sample_consensus(sample,input_vcf,args) tmp_aln = str(uuid4()) run_cmd(f"cat {args.conf['ref']} {consensus_file}> {tmp_aln}") @@ -85,11 +86,11 @@ def get_consensus_vcf(sample,input_vcf,args): os.remove(tmp_aln) return outfile -def wrapper_function(s,args): +def wrapper_function(s: str,args: argparse.Namespace) -> str: args.bam = f"{args.dir}/bam/{s}.bam" return prepare_sample_consensus(s,f"{args.dir}/vcf/{s}.vcf.gz",args) -def calculate_phylogeny(args): +def calculate_phylogeny(args: argparse.Namespace) -> None: samples = [l.strip() for l in open(args.samples)] args.tmp_masked_vcf = f"{args.files_prefix}.masked.vcf.gz" diff --git a/tbprofiler/reformat.py b/tbprofiler/reformat.py index 99852a8..55c730a 100644 --- a/tbprofiler/reformat.py +++ b/tbprofiler/reformat.py @@ -1,11 +1,42 @@ -import pathogenprofiler as pp -from .xdb import * - -def get_main_lineage(lineage_dict_list,max_node_skip=1): +from pathogenprofiler.models import BarcodeResult, Variant, BamQC, FastaQC, DrVariant, GenomicPosition +# from .xdb import * +from .models import Lineage, Result, TbDrVariant, TbVariant, ProfileResult, Spoligotype +from typing import List, Tuple , Union, Optional +from .utils import get_gene2drugs +import argparse + +def get_main_lineage(lineages: List[Lineage],max_node_skip: int = 1) -> Tuple[str, str]: + """ + Get the main lineage and sublineage from a list of Lineage objects + + Arguments + --------- + lineages : List[Lineage] + List of Lineage objects + + max_node_skip : int + Maximum number of nodes to skip when collapsing lineages + + Returns + ------- + Tuple[str, str] + Tuple of main lineage and sublineage + + Examples + -------- + >>> from tbprofiler import get_main_lineage + >>> lineage = [ + ... Lineage(fraction=0.8, lineage="lineage1", family="family1", spoligotype="spol1", rd="rd1"), + ... Lineage(fraction=0.2, lineage="lineage2", family="family2", spoligotype="spol2", rd="rd2"), + ... Lineage(fraction=0.2, lineage="lineage2.2", family="family2.2", spoligotype="spol2.2", rd="rd2.2"), + ... Lineage(fraction=0.8, lineage="lineage1.1", family="family1.1", spoligotype="spol1.1", rd="rd1.1"), + ... ] + >>> get_main_lineage(lineage) + ('lineage1;lineage2', 'lineage1.1;lineage2.2') + """ def collapse_paths(paths): filtered_paths = [] for p in sorted(paths,reverse=True): - if p=="lineageBOV_AFRI": continue path_stored = any([p in x for x in filtered_paths]) if not path_stored: filtered_paths.append(p) @@ -16,9 +47,9 @@ def derive_path(x): lin_freqs = {} pool = [] - for l in lineage_dict_list: - pool.append(l["lin"].replace("M.","M_")) - lin_freqs[l["lin"].replace("M.","M_")] = float(l["frac"]) + for l in lineages: + pool.append(l.lineage.replace("M.","M_")) + lin_freqs[l.lineage.replace("M.","M_")] = float(l.fraction) routes = [";".join(derive_path(x)) for x in pool] paths = collapse_paths(routes) path_mean_freq = {} @@ -29,28 +60,55 @@ def derive_path(x): freqs = [lin_freqs[n] for n in nodes if n in lin_freqs] path_mean_freq[nodes] = sum(freqs)/len(freqs) main_lin = ";".join(sorted(list(set([x[0] for x in path_mean_freq])))).replace("_",".") - sublin = ";".join([x[-1] for x in path_mean_freq]).replace("_",".") + sublin = ";".join(sorted(list(set([x[-1] for x in path_mean_freq])))).replace("_",".") return (main_lin,sublin) -def barcode2lineage(results,max_node_skip=1): - results["lineage"] = [] - for d in results["barcode"]: - results["lineage"].append({"lin":d["annotation"],"family":d["info"][0],"spoligotype":d["info"][1],"rd":d["info"][2],"frac":d["freq"]}) - del results["barcode"] - results["lineage"] = sorted(results["lineage"],key= lambda x:len(x["lin"])) - main_lin,sublin = get_main_lineage(results["lineage"]) - results["main_lin"] = main_lin - results["sublin"] = sublin - return results - - - - -def add_drtypes(results): +def barcode2lineage(barcode: List[BarcodeResult]) -> List[Lineage]: + """ + Convert a list of BarcodeResult objects to a list of Lineage objects + + Arguments + --------- + barcode : List[BarcodeResult] + List of BarcodeResult objects + + Returns + ------- + List[Lineage] + List of Lineage objects + + Examples + -------- + >>> from tbprofiler import barcode2lineage + >>> barcode = [ + ... BarcodeResult(id="barcode1", frequency=0.8, info=["family1", "spol1", "rd1"]), + ... BarcodeResult(id="barcode2", frequency=0.2, info=["family2", "spol2", "rd2"]), + ... ] + >>> barcode2lineage(barcode) + [Lineage(fraction=0.8, lineage='barcode1', family='family1', spoligotype='spol1', rd='rd1'), Lineage(fraction=0.2, lineage='barcode2', family='family2', spoligotype='spol2', rd='rd2')] + """ + + lineage = [] + for d in barcode: + lineage.append( + Lineage( + fraction=d.frequency, + lineage=d.id, + family=d.info[0], + spoligotype=d.info[1], + rd=d.info[2], + ) + ) + return lineage + + + + + +def get_drtypes(dr_variants: List[TbDrVariant]) -> str: resistant_drugs = set() - for var in results["dr_variants"]: - for d in var["drugs"]: - resistant_drugs.add(d["drug"]) + for var in dr_variants: + resistant_drugs.update(var.get_drugs()) FLQ_set = set(["levofloxacin","moxifloxacin","ciprofloxacin","ofloxacin"]) groupA_set = set(["bedaquiline","linezolid"]) @@ -75,9 +133,7 @@ def add_drtypes(results): else: drtype = "Other" - - results["drtype"] = drtype - return results + return drtype unlist = lambda t: [item for sublist in t for item in sublist] @@ -94,30 +150,105 @@ def variant_present(var,results): result = v return result -def reformat(results,conf,mutation_metadata=False,use_suspect=False): - results["notes"] = [] - results["variants"] = [x for x in results["variants"] if len(x["consequences"])>0] - results["variants"] = pp.select_csq(results["variants"]) - results["variants"] = pp.dict_list_add_genes(results["variants"],conf) - if "gene_coverage" in results["qc"]: - results["qc"]["gene_coverage"] = pp.dict_list_add_genes(results["qc"]["gene_coverage"],conf) - if "missing_positions" in results["qc"]: - results["qc"]["missing_positions"] = pp.reformat_missing_genome_pos(results["qc"]["missing_positions"],conf) - if "barcode" in results: - results = barcode2lineage(results) - - results = pp.process_variants(results,conf,['drug_resistance']) - results['dr_variants'] = results['drug_resistance_variants'] - del results['drug_resistance_variants'] - results['dr_variants'] = pp.add_drugs_to_variants(results['dr_variants']) - results['qc_fail_variants'] = pp.add_drugs_to_variants(results['qc_fail_variants']) - results = add_drtypes(results) - results["db_version"] = conf["version"] - if mutation_metadata: - pass - # results = add_mutation_metadata(results) - if use_suspect: - results = suspect_profiling(results) - - # apply_rules(results,conf) - return results +def process_variants( + variants: List[Union[Variant,DrVariant]], + bed_file: str +) -> List[Union[TbDrVariant,TbVariant]]: + new_objects = [] + gene2drugs = get_gene2drugs(bed_file) + for var in variants: + dump = var.model_dump() + dump['locus_tag'] = dump['gene_id'] + dump['gene_associated_drugs'] = gene2drugs.get(var.gene_name, []) + if isinstance(var, DrVariant): + new_objects.append(TbDrVariant(**dump)) + else: + new_objects.append(TbVariant(**dump)) + return new_objects + +def split_variants( + variants: List[Variant], + bed_file: str +) -> Tuple[List[TbDrVariant], List[TbVariant]]: + variants = process_variants(variants, bed_file) + + dr_variants = [] + other_variants = [] + fail_variants = [] + for var in variants: + if var.filter.upper() == "PASS": + if isinstance(var, TbDrVariant): + dr_variants.append(var) + else: + other_variants.append(var) + else: + fail_variants.append(var) + return dr_variants,other_variants,fail_variants + +def filter_missing_positions(missing_positions: List[GenomicPosition]) -> List[GenomicPosition]: + for pos in missing_positions: + who_annotations = [ + ann for ann in pos.annotation if + ann['type']=='who_confidence' and + ann['confidence'] in ('Assoc w R - Interim','Assoc w R') + ] + other_annotations = [ann for ann in pos.annotation if ann['type']!='who_confidence'] + pos.annotation = who_annotations + other_annotations + + return [pos for pos in missing_positions if len(pos.annotation)>0] + +def create_resistance_result( + args: argparse.Namespace, + notes: List[str], + lineage: List[Lineage], + spoligotype: Optional[Spoligotype], + variants: List[Variant], + qc: Union[BamQC, FastaQC] +) -> ProfileResult: + dr_variants, other_variants, fail_variants = split_variants(variants,args.conf['bed']) + main_lineage, sub_lineage = get_main_lineage(lineage) + drtype = get_drtypes(dr_variants) + if hasattr(qc, 'missing_positions'): + qc.missing_positions = filter_missing_positions(qc.missing_positions) + + data = { + 'id':args.prefix, + 'notes':notes, + 'lineage':lineage, + 'spoligotype':spoligotype, + 'drtype':drtype, + 'dr_variants':dr_variants, + 'other_variants':other_variants, + 'qc_fail_variants':fail_variants, + 'sub_lineage':sub_lineage, + 'main_lineage':main_lineage, + 'tbprofiler_version':args.version, + 'db_version':args.conf['version'], + } + + return ProfileResult(**data, qc=qc) + + +def clean_up_duplicate_annotations(variants: Variant) -> None: + """ + Remove duplicate annotations from a list of Variant objects + + Arguments + --------- + variants : List[Variant] + List of Variant objects + + Returns + ------- + None + """ + confidence_levels = ['Assoc w R','Assoc w R - Interim','Uncertain significance','Not assoc w R - Interim','Not assoc w R'] + for var in variants: + keys = set([(ann['type'],ann['drug']) for ann in var.annotation]) + new_annotations = [] + for key in keys: + anns = [ann for ann in var.annotation if ann['type']==key[0] and ann['drug']==key[1]] + if len(anns)>1: + anns = sorted(anns,key=lambda x: confidence_levels.index(x['confidence'])) + new_annotations.append(anns[0]) + var.annotation = new_annotations \ No newline at end of file diff --git a/tbprofiler/snp_dists.py b/tbprofiler/snp_dists.py index 50ca3f6..e854900 100644 --- a/tbprofiler/snp_dists.py +++ b/tbprofiler/snp_dists.py @@ -10,34 +10,37 @@ import sqlite3 from tqdm import tqdm from .phylo import get_consensus_vcf +import argparse +from .models import ProfileResult, LinkedSample +from typing import List, Tuple -def extract_variant_set_old(vcf_file, exclude_bed, min_cov=10, min_freq=0.8): - ref_diffs = set() - missing = set() - for l in cmd_out(f"bcftools view -V indels -T ^{exclude_bed} {vcf_file} | bcftools query -f '%POS[\t%GT:%AD]\n'"): - if l[0]=="#": continue - row = l.strip().split() - pos = int(row[0]) - gt,ad = row[1].split(":") - if ad==".": # delly - continue - if gt==".": - missing.add(pos) - continue - ad = [int(x) for x in ad.split(",")] - if sum(ad)<=min_cov: - missing.add(pos) - continue - adf = sorted([float(x/sum(ad)) for x in ad]) - if adf[-1] Tuple[set,set]: ref_diffs = set() missing = set() for l in cmd_out(f"bcftools view {vcf_file} | bcftools query -f '%POS[\t%GT]\n'"): @@ -53,28 +56,52 @@ def extract_variant_set(vcf_file): else: raise Exception("Unknown GT: %s" % gt) - return ref_diffs,missing + return ref_diffs, missing class DB: - def __init__(self, filename): + """ + Class for storing and searching for SNP differences between samples + + Arguments + --------- + filename : str + Filename of the sqlite database to use + + Attributes + ---------- + filename : str + Filename of the sqlite database to use + conn : sqlite3.Connection + Connection to the sqlite database + c : sqlite3.Cursor + Cursor to the sqlite database + + Methods + ------- + store(result,vcf_file) + Store the SNP differences from a sample in the database + search(result,vcf_file,cutoff=20) + Search for samples with similar SNP differences in the database + """ + def __init__(self, filename: str) -> None: self.filename = filename self.conn = sqlite3.connect(filename) self.c = self.conn.cursor() self.c.execute('''CREATE TABLE IF NOT EXISTS variants (sample text, lineage text, diffs binary, missing binary)''') - def store(self,json_results, vcf_file): - sample_name = json_results["id"] + def store(self,result: ProfileResult, vcf_file: str) -> None: + sample_name = result.id diffs,missing = extract_variant_set(vcf_file) res = self.c.execute("SELECT sample FROM variants WHERE sample=?",(sample_name,)).fetchone() if res: - self.c.execute("UPDATE variants SET lineage=?, diffs=?, missing=? WHERE sample=?",(json_results['sublin'], pickle.dumps(diffs), pickle.dumps(missing), sample_name)) + self.c.execute("UPDATE variants SET lineage=?, diffs=?, missing=? WHERE sample=?",(result.sub_lineage, pickle.dumps(diffs), pickle.dumps(missing), sample_name)) else: - self.c.execute("INSERT INTO variants VALUES (?,?,?,?)",(sample_name, json_results['sublin'], pickle.dumps(diffs), pickle.dumps(missing))) + self.c.execute("INSERT INTO variants VALUES (?,?,?,?)",(sample_name, result.sub_lineage, pickle.dumps(diffs), pickle.dumps(missing))) self.conn.commit() self.diffs = diffs self.missing = missing - def search(self,json_results,vcf_file, cutoff = 20): + def search(self,result: ProfileResult, vcf_file: str, cutoff: int = 20) -> List[LinkedSample]: logging.info("Searching for close samples in %s" % self.filename) - self.c.execute("SELECT sample, diffs, missing FROM variants WHERE lineage=?",(json_results['sublin'],)) + self.c.execute("SELECT sample, diffs, missing FROM variants WHERE lineage=?",(result.sub_lineage,)) self.diffs,self.missing = extract_variant_set(vcf_file) sample_dists = [] for s,d,m in tqdm(self.c.fetchall(),desc="Searching for close samples"): @@ -82,29 +109,24 @@ def search(self,json_results,vcf_file, cutoff = 20): dist -= self.missing dist -= pickle.loads(m) if (ld:=len(dist)) None: logging.info("Calculating SNP distances to look for closely related samples") if args.vcf: wg_vcf = args.vcf @@ -119,31 +141,33 @@ def run_snp_dists(args,results): lock = f"{dbname}.lock" with filelock.SoftFileLock(lock): db = DB(dbname) - results["close_samples"] = db.search(results,input_vcf,args.snp_dist) + linked_samples = db.search(result,input_vcf,args.snp_dist) if not args.snp_diff_no_store: - db.store(results,input_vcf) - results["close_samples"] = [d for d in results["close_samples"] if d["sample"]!=results["id"]] + db.store(result,input_vcf) + result.linked_samples = [d for d in linked_samples if d.sample!=result.id] -def update_neighbour_snp_dist_output(args,results): - for s in results['close_samples']: - logging.debug("Close sample found: %s (%s). Updating result files" % (s['sample'],s['distance'])) - f = os.path.join(args.dir,"results",f"{s['sample']}.results.json") +def update_neighbour_snp_dist_output(args: argparse.Namespace,result: ProfileResult) -> None: + for s in result.linked_samples: + logging.debug("Close sample found: %s (%s). Updating result files" % (s.sample,s.distance)) + f = os.path.join(args.dir,"results",f"{s.sample}.results.json") if not os.path.exists(f): continue - if not sample_in_json(args.prefix,f): + if not sample_in_linked_list(args.prefix,f): lock = filelock.SoftFileLock(f + ".lock") with lock: logging.debug("Acquiring lock for %s" % f) - data = json.load(open(f)) - data['close_samples'].append({ - "sample":args.prefix, - "distance":s['distance'], - "diffs":s['diffs'], - }) + data = ProfileResult(**json.load(open(f))) + data.linked_samples.append( + LinkedSample( + sample = args.prefix, + distance = s.distance, + positions = s.positions + ) + ) temp_args = copy(args) - temp_args.prefix = s['sample'] + temp_args.prefix = s.sample write_outputs(temp_args,data,template_file=args.text_template) logging.debug("Finished with lock for %s" % f) diff --git a/tbprofiler/spoligotyping.py b/tbprofiler/spoligotyping.py index 24989f2..a8d49ba 100644 --- a/tbprofiler/spoligotyping.py +++ b/tbprofiler/spoligotyping.py @@ -1,6 +1,7 @@ import os import pathogenprofiler as pp import csv +from .models import Spoligotype def spoligotype(args): if "bam_file" in vars(args) and args.bam_file: @@ -11,7 +12,8 @@ def spoligotype(args): result = fa2spoligotype(args.fasta,args.files_prefix,args.conf,threads=args.threads,max_mem=args.ram,counter=args.kmer_counter) ann = get_spoligotype_annotation(result["octal"],args.conf['spoligotype_annotations']) result.update(ann) - return result + + return Spoligotype(**result) def fa2spoligotype(fasta,files_prefix,conf,threads=1,max_mem=2,counter="kmc"): fasta = pp.Fasta(fasta) diff --git a/tbprofiler/text.py b/tbprofiler/text.py index da0f115..5de593a 100644 --- a/tbprofiler/text.py +++ b/tbprofiler/text.py @@ -6,11 +6,15 @@ from .utils import get_drug_list import jinja2 from copy import copy +import pathogenprofiler as pp +from .models import ProfileResult, Lineage +from typing import Union, List -def lineagejson2text(x): +def lineagejson2text(lineages: List[Lineage],sep: str = "\t") -> str: textlines = [] - for l in x: - textlines.append("%(lin)s\t%(family)s\t%(spoligotype)s\t%(rd)s\t%(frac)s" % l) + for l in lineages: + row = [l.lineage,l.fraction,l.info["family"],l.info["spoligotype"],l.info["rd"]] + textlines.append(sep.join(row)) return "\n".join(textlines) default_template = """ @@ -22,10 +26,10 @@ def lineagejson2text(x): Summary ------- ID{{d['sep']}}{{d['id']}} -Date{{d['sep']}}{{d['date']}} +Date{{d['sep']}}{{d['timestamp']}} Strain{{d['sep']}}{{d['strain']}} Drug-resistance{{d['sep']}}{{d['drtype']}} -Median Depth{{d['sep']}}{{d['med_dp']}} +Median Depth{{d['sep']}}{{d['median_depth']}} {% if 'notes' in d %} Notes @@ -99,11 +103,10 @@ def lineagejson2text(x): Genome Medicine 11, 41. 2019 """ -def load_text(text_strings,template = None): - if template==None: - template = default_template - else: - template = open(template).read() +def load_text(text_strings: str,template: str = None,file_template: str = None): + + if file_template: + template = open(file_template).read() t = jinja2.Template(template) return t.render(d=text_strings) @@ -114,77 +117,40 @@ def stringify_annotations(annotation): annotations.append("|".join([f'{key}={val}' for key,val in ann.items()])) return ";".join(annotations) -def write_text(json_results,conf,outfile,columns = None,sep="\t",add_annotations=True,template_file = None): - json_results = copy(json_results) - if columns==None: - columns = [] +def write_text( + result: ProfileResult, + conf: dict, + outfile: str, + sep="\t", + template_file=None + ): + + template_string = default_template + text_strings = {} + text_strings["id"] = result.id + text_strings["timestamp"] = result.timestamp + + summary_table = pp.get_dr_summary(result.dr_variants,conf) + text_strings["notes"] = "\n".join(result.notes) + text_strings["dr_report"] = pp.dict_list2text(summary_table,sep=sep) + text_strings["dr_var_report"] = pp.object_list2text(result.dr_variants,mappings={"pos":"Genome Position","gene_id":"Locus Tag",'gene_name':'Gene name',"type":"Variant type","change":"Change","freq":"Estimated fraction","drugs.drug":"Drug","drugs.confidence":"Confidence","drugs.comment":"Comment"},sep=sep) + text_strings["other_var_report"] = pp.object_list2text(result.other_variants,mappings={"pos":"Genome Position","gene_id":"Locus Tag",'gene_name':'Gene name',"type":"Variant type","change":"Change","freq":"Estimated fraction","annotation.drug":"Gene associated drug","annotation.confidence":"Confidence","annotation.comment":"Comment"},sep=sep) + text_strings["fail_var_report"] = pp.object_list2text(result.qc_fail_variants,mappings={"pos":"Genome Position","gene_id":"Locus Tag",'gene_name':'Gene name',"type":"Variant type","change":"Change","freq":"Estimated fraction","annotation.drug":"Gene associated drug","annotation.confidence":"Confidence","annotation.comment":"Comment"},sep=sep) + text_strings["coverage_report"] = result.get_qc() + text_strings['lineage_report'] = pp.object_list2text(result.lineage,mappings={"lineage":"Lineage","fraction":"Fraction","family":"Family","rd":"rd"},sep=sep)#result.lineage) + text_strings['strain'] = result.sub_lineage + text_strings['drtype'] = result.drtype + text_strings['median_depth'] = result.qc.get_target_median_depth() + + if result.spoligotype: + text_strings.update(result.spoligotype.model_dump()) + text_strings["spacers"] = pp.object_list2text(result.spoligotype.spacers,mappings={"name":"Spacer","seq":"Sequence","count":"Count"},sep=sep) - - text_strings = json_results - text_strings["id"] = json_results["id"] - text_strings["date"] = time.ctime() - if "dr_variants" in json_results: - use_suspect = False - for v in json_results["dr_variants"]: - for d in v["drugs"]: - if "evidence" in d: - if d["evidence"] in ('suspect-PZA','suspect-BDQ'): - use_suspect = True - - if use_suspect: - columns.append("evidence") - if add_annotations: - for var in json_results["dr_variants"] + json_results["other_variants"]: - if "annotation" in var: - var["annotation_str"] = stringify_annotations(var["annotation"]) - else: - var["annotation_str"] = "" - - json_results = get_summary(json_results,conf,columns = columns) - drug_list = get_drug_list(conf["bed"]) - - json_results["drug_table"] = [[y for y in json_results["drug_table"] if y["Drug"].upper()==d.upper()][0] for d in conf["drugs"] if d in drug_list] - for var in json_results["dr_variants"]: - var["drug"] = "; ".join([d["drug"] for d in var["drugs"]]) - - text_strings["dr_report"] = dict_list2text(json_results["drug_table"],["Drug","Genotypic Resistance","Mutations"]+columns if columns else [],sep=sep) - text_strings["dr_var_report"] = dict_list2text(json_results["dr_variants"],mappings={"genome_pos":"Genome Position","locus_tag":"Locus Tag","gene":"Gene","type":"Variant type","change": "Change","depth":"Depth of coverage","freq":"Estimated fraction","drugs.drug":"Drug","annotation_str":"Annotation"},sep=sep) - text_strings["other_var_report"] = dict_list2text(json_results["other_variants"],mappings={"genome_pos":"Genome Position","locus_tag":"Locus Tag","gene":"Gene","type":"Variant type","change": "Change","depth":"Depth of coverage","freq":"Estimated fraction","annotation_str":"Annotation"},sep=sep) - text_strings["qc_fail_var_report"] = dict_list2text(json_results["qc_fail_variants"],mappings={"genome_pos":"Genome Position","locus_tag":"Locus Tag","gene":"Gene","type":"Variant type","change": "Change","depth":"Depth of coverage","freq":"Estimated fraction","drugs.drug":"Drug","annotation_str":"Annotation"},sep=sep) - - text_strings["drtype"] = json_results["drtype"] - - if "notes" in json_results: - text_strings['notes'] = "\n".join(json_results['notes']) - - if "sublin" in json_results: - text_strings["strain"] = json_results["sublin"] - text_strings["lineage_report"] = dict_list2text(json_results["lineage"],["lin","frac","family","spoligotype","rd"],{"lin":"Lineage","frac":"Estimated fraction","spoligotype":"Spoligotype","rd":"Rd"},sep=sep) - - if "qc" in json_results: - text_strings["med_dp"] = json_results["qc"]["region_median_depth"] if json_results['input_data_source'] in ('bam','fastq') else "NA" - text_strings["coverage_report"] = dict_list2text(json_results["qc"]["gene_coverage"], ["gene","locus_tag","cutoff","fraction"],sep=sep) if "gene_coverage" in json_results["qc"] else "Not available" - text_strings["missing_report"] = dict_list2text(json_results["qc"]["missing_positions"],["gene","locus_tag","position","variants","drugs"],sep=sep) if "missing_positions" in json_results["qc"] else "Not available" - if "spoligotype" in json_results: - text_strings["binary"] = json_results["spoligotype"]["binary"] - text_strings["octal"] = json_results["spoligotype"]["octal"] - text_strings["SIT"] = json_results["spoligotype"]["SIT"] - text_strings["family"] = json_results["spoligotype"]["family"] - text_strings["spacers"] = dict_list2text(json_results["spoligotype"]["spacers"],["name","count"]) - - if "close_samples" in json_results: - text_strings["close_samples"] = dict_list2text(json_results["close_samples"],["sample","distance"],sep=sep) - - if "tree" in json_results: - text_strings["tree"] = json_results["tree"] - - text_strings["pipeline"] = dict_list2text(json_results["pipeline"],["Analysis","Program"],sep=sep) - text_strings["version"] = json_results["tbprofiler_version"] - tmp = json_results["db_version"] - text_strings["db_version"] = "%s_%s_%s_%s" % (tmp["name"],tmp["commit"],tmp["Author"],tmp["Date"]) if sep=="\t": text_strings["sep"] = ": " else: text_strings["sep"] = "," + with open(outfile,"w") as O: - O.write(load_text(text_strings,template_file)) \ No newline at end of file + O.write(load_text(text_strings,template_string,template_file)) + diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index 15a64f3..d75fd90 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -1,5 +1,15 @@ from collections import defaultdict from pathogenprofiler import Vcf +import argparse + +def process_tb_profiler_args(args: argparse.Namespace) -> None: + if args.snp_dist or args.update_phylo: + args.call_whole_genome = True + args.call_lineage = False if args.no_lineage else True + if args.vcf and args.spoligotype: + args.spoligotype = False + if args.snp_dist or args.update_phylo: + args.call_whole_genome = True def get_vcf_samples(vcf_file): vcf = Vcf(vcf_file) From 69d78759cd7d09725f4a9d062cad008140aef8a3 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 15:36:24 +0000 Subject: [PATCH 11/53] improve exiting --- tb-profiler | 21 ++++++++++++--------- 1 file changed, 12 insertions(+), 9 deletions(-) diff --git a/tb-profiler b/tb-profiler index 4d4786b..8db0e85 100644 --- a/tb-profiler +++ b/tb-profiler @@ -35,13 +35,13 @@ def cleanup(): outfile = "%s.errlog.txt" % args.vcf.split("/")[-1] else: outfile = "%s.errlog.txt" % uuid4() - if "conf" in vars(args): + if "conf" in vars(args) and args.conf: del args.conf['json_db'] with open(outfile, "w") as O: O.write("# tb-profiler error report\n\n") O.write("* OS: %s\n" % sys.platform) O.write("* Program version: %s\n" % tbp.__version__) - O.write("* Database version: %s\n" % args.conf.get("version","N/A") if "conf" in vars(args) else "") + O.write("* Database version: %s\n" % args.conf.get("version","N/A") if "conf" in vars(args) and args.conf else "") O.write("* Program call:\n") O.write("```\n") O.write("%s\n" % vars(args)) @@ -162,11 +162,11 @@ def main_profile(args): # ### Move files to respective directories ### result_files = { - "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.csq.vcf.gz" % (args.dir,args.prefix), - "%s.vcf.gz" % args.files_prefix: "%s/vcf/%s.vcf.gz" % (args.dir,args.prefix), - "%s.bam" % args.files_prefix: "%s/bam/%s.bam" % (args.dir,args.prefix), - "%s.bam.bai" % args.files_prefix: "%s/bam/%s.bam.bai" % (args.dir,args.prefix), - "%s.nwk" % args.files_prefix: "%s/results/%s.nwk" % (args.dir,args.prefix), + "%s.targets.vcf.gz" % args.files_prefix: "%s/%s.targets.csq.vcf.gz" % (args.dir,args.prefix), + "%s.vcf.gz" % args.files_prefix: "%s/%s.vcf.gz" % (args.dir,args.prefix), + "%s.bam" % args.files_prefix: "%s/%s.bam" % (args.dir,args.prefix), + "%s.bam.bai" % args.files_prefix: "%s/%s.bam.bai" % (args.dir,args.prefix), + "%s.nwk" % args.files_prefix: "%s/%s.nwk" % (args.dir,args.prefix), } for file,target in result_files.items(): if os.path.isfile(file): @@ -564,12 +564,15 @@ if hasattr(args, 'func'): if hasattr(args, 'db'): if args.db=="tbdb" and not args.external_db and pp.nofile(sys.base_prefix+"/share/tbprofiler/tbdb.fasta"): - logging.error("Can't find the tbdb file at %s. Please run 'tb-profiler update_tbdb' to load the default library or specify another using the '--external_db' flag" % sys.base_prefix,ext=True) + logging.error("Can't find the tbdb file at %s. Please run 'tb-profiler update_tbdb' to load the default library or specify another using the '--external_db' flag" % sys.base_prefix) + raise SystemExit if args.external_db: args.conf = pp.get_db(args.software_name,args.external_db) else: args.conf = pp.get_db(args.software_name,args.db) - + if args.conf is None: + logging.error("Can't find the database %s. Please run 'tb-profiler create_db' to create the database or specify another using the '--external_db' flag" % args.db) + raise SystemExit args.func(args) else: parser.print_help(sys.stderr) From bf0920880b1891a9b84d5f082445f2cd87a589b9 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 15:46:53 +0000 Subject: [PATCH 12/53] create output directories --- tb-profiler | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/tb-profiler b/tb-profiler index 8db0e85..0ac0d75 100644 --- a/tb-profiler +++ b/tb-profiler @@ -154,6 +154,9 @@ def main_profile(args): os.mkdir(d) + + create_output_directories(args) + tbp.write_outputs(args,result) @@ -269,6 +272,11 @@ def main_reformat(args): args.prefix = result.id tbp.write_outputs(args,result,template_file=args.text_template) +def create_output_directories(args): + for d in ["bam","vcf","results"]: + if pp.nofolder(args.dir+"/"+d): + os.mkdir(args.dir+"/"+d) + def main_batch(args): if args.args==None: args.args="" From cf5e7674f767ede0ba3ff0bdecc57fe6e31c7d90 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 15:52:12 +0000 Subject: [PATCH 13/53] update update --- tb-profiler | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/tb-profiler b/tb-profiler index 0ac0d75..c4b1bdd 100644 --- a/tb-profiler +++ b/tb-profiler @@ -182,7 +182,6 @@ def main_profile(args): pp.logging.info("[green]Profiling finished sucessfully![/]",extra={"markup": True}) def main_update_tbdb(args): - tmp = "--match_ref %s" % os.path.abspath(args.match_ref) if args.match_ref else "" if pp.nofolder("tbdb"): pp.run_cmd(f"git clone {args.repo}") os.chdir("tbdb") @@ -191,7 +190,14 @@ def main_update_tbdb(args): pp.run_cmd("git pull") if args.commit: pp.run_cmd(f"git checkout {args.commit}") - pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {tmp} --load") + extra_args = [] + if os.path.isfile('rules.txt'): + extra_args.append("--rules rules.txt") + if args.match_ref: + extra_args.append("--match_ref %s" % os.path.abspath(args.match_ref)) + + extra_args = " ".join(extra_args) + pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {extra_args} --load") os.chdir("../") pp.logging.info("Sucessfully updated TBDB") From 56dde8cad24c32ad7715884eb9ee501e687100f2 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 16:03:07 +0000 Subject: [PATCH 14/53] update update --- tbprofiler/collate.py | 29 +++++++++++++++-------------- 1 file changed, 15 insertions(+), 14 deletions(-) diff --git a/tbprofiler/collate.py b/tbprofiler/collate.py index 3d95cfe..a38da67 100644 --- a/tbprofiler/collate.py +++ b/tbprofiler/collate.py @@ -242,20 +242,21 @@ def generate_distance_matrix(rows: List[dict], edges: List[TransmissionEdge], pr Prefix for output files """ samples = [r['sample'] for r in rows] - with open(prefix+".distance_matrix.txt","w") as MAT: - MAT.write("samples\t%s\n" % "\t".join(samples)) - transformed_edges = {} - for e in edges: - transformed_edges[(e.source,e.target)] = e.distance - for si in samples: - row = [si] - for sj in samples: - ss = tuple(sorted([si,sj])) - if si==sj: - row.append("0.0") - else: - row.append(str(transformed_edges[ss]) if ss in transformed_edges else "NA") - MAT.write("%s\n" % "\t".join(row)) + if len(edges)>0: + with open(prefix+".distance_matrix.txt","w") as MAT: + MAT.write("samples\t%s\n" % "\t".join(samples)) + transformed_edges = {} + for e in edges: + transformed_edges[(e.source,e.target)] = e.distance + for si in samples: + row = [si] + for sj in samples: + ss = tuple(sorted([si,sj])) + if si==sj: + row.append("0.0") + else: + row.append(str(transformed_edges[ss]) if ss in transformed_edges else "NA") + MAT.write("%s\n" % "\t".join(row)) def generate_variant_matrix(variant_db: VariantDB, prefix: str) -> None: From b0e0e70fb57c4e92e64642521cc1749932208be5 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 18:47:07 +0000 Subject: [PATCH 15/53] add conda env file --- 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+https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2 +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-h77eed37_1.conda https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h41732ed_0.conda -https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-12.2.0-h337968e_19.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-12.2.0-h46fd767_19.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.9-3_cp39.conda -https://conda.anaconda.org/conda-forge/noarch/tzdata-2023c-h71feb2d_0.conda -https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-12.2.0-h69a702a_19.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgomp-12.2.0-h65d4601_19.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_4.conda +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/mpi-1.0-openmpi.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.10-4_cp310.conda +https://conda.anaconda.org/conda-forge/noarch/tzdata-2023d-h0c530f3_0.conda +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_4.conda https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2 -https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-12.2.0-h65d4601_19.tar.bz2 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+https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/openjdk-17.0.8-hbf40d96_2.conda +https://conda.anaconda.org/conda-forge/linux-64/pandas-2.2.0-py310hcc13569_0.conda +https://conda.anaconda.org/conda-forge/noarch/pydantic-2.6.0-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/noarch/rich-argparse-1.4.0-pyhd8ed1ab_0.conda +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/tabixpp-1.1.2-hd68fcf3_1.tar.bz2 +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/gatk4-4.4.0.0-py36hdfd78af_0.tar.bz2 +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/pilon-1.24-hdfd78af_0.tar.bz2 +https://conda.anaconda.org/bioconda/noarch/snpeff-5.2-hdfd78af_0.tar.bz2 +https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/trimmomatic-0.39-hdfd78af_2.tar.bz2 +https://conda.anaconda.org/bioconda/linux-64/vcflib-1.0.9-h146fbdb_4.tar.bz2 +https://conda.anaconda.org/bioconda/linux-64/freebayes-1.3.6-hb0f3ef8_7.tar.bz2 From 13989c4e1ac58d640babf30249003e4f423876d0 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 19:11:59 +0000 Subject: [PATCH 16/53] update tests --- tests/run_test.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tests/run_test.py b/tests/run_test.py index 5f85d71..7534f41 100644 --- a/tests/run_test.py +++ b/tests/run_test.py @@ -31,9 +31,9 @@ ] def test_db(): - run_cmd("tb-profiler update_tbdb --branch test") + run_cmd("tb-profiler update_tbdb --branch test --prefix testdb") -db = 'whov2' +db = 'testdb' def check_assertations(filename): results = json.load(open(filename)) From ce73fddc294740428abae3fb265e9bff4b73f7c5 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 19:12:06 +0000 Subject: [PATCH 17/53] fix bug --- tb-profiler | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/tb-profiler b/tb-profiler index c4b1bdd..feaca95 100644 --- a/tb-profiler +++ b/tb-profiler @@ -204,7 +204,7 @@ def main_update_tbdb(args): def main_create_db(args): if args.no_overwrite: dbs = pp.list_db(args.software_name) - names = [x["name"] for x in dbs] + names = [x['version']['name'] for x in dbs] if args.prefix in names: pp.warninglog("\nWarning: A database with this name already exists!\n") sys.exit() @@ -313,8 +313,9 @@ def main_batch(args): def main_list_db(args): dbs = pp.list_db(args.software_name) for db in dbs: - db['location'] = f"{sys.base_prefix}/share/{args.software_name}/{db['name']}" - sys.stdout.write("%(name)s\t%(commit)s\t%(Author)s\t%(Date)s\t%(location)s\n" % db) + if 'version' in db: + d = dict(**db['version'], location=f"{sys.base_prefix}/share/{args.software_name}/{db['version']['name']}") + sys.stdout.write("%(name)s\t%(commit)s\t%(Author)s\t%(Date)s\t%(location)s\n" % d) From 80be8a211d6d15d7c4762890c78d904789a068a6 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 19:19:27 +0000 Subject: [PATCH 18/53] fix bug --- tb-profiler | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/tb-profiler b/tb-profiler index feaca95..5e905ec 100644 --- a/tb-profiler +++ b/tb-profiler @@ -165,11 +165,11 @@ def main_profile(args): # ### Move files to respective directories ### result_files = { - "%s.targets.vcf.gz" % args.files_prefix: "%s/%s.targets.csq.vcf.gz" % (args.dir,args.prefix), - "%s.vcf.gz" % args.files_prefix: "%s/%s.vcf.gz" % (args.dir,args.prefix), - "%s.bam" % args.files_prefix: "%s/%s.bam" % (args.dir,args.prefix), - "%s.bam.bai" % args.files_prefix: "%s/%s.bam.bai" % (args.dir,args.prefix), - "%s.nwk" % args.files_prefix: "%s/%s.nwk" % (args.dir,args.prefix), + "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.vcf.gz" % (args.dir,args.prefix), + "%s.vcf.gz" % args.files_prefix: "%s/vcf/%s.vcf.gz" % (args.dir,args.prefix), + "%s.bam" % args.files_prefix: "%s/bam/%s.bam" % (args.dir,args.prefix), + "%s.bam.bai" % args.files_prefix: "%s/bam/%s.bam.bai" % (args.dir,args.prefix), + "%s.nwk" % args.files_prefix: "%s/results/%s.nwk" % (args.dir,args.prefix), } for file,target in result_files.items(): if os.path.isfile(file): From 50d36e49f6868e1e940c6b0b0c096a38c08ed635 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:07:43 +0000 Subject: [PATCH 19/53] small fix --- tb-profiler | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tb-profiler b/tb-profiler index 5e905ec..79f5612 100644 --- a/tb-profiler +++ b/tb-profiler @@ -494,7 +494,7 @@ parser_sub.add_argument('--bedmask',default="mask.bed",type=str,help='A bed file parser_sub.add_argument('--rules',type=str,help='A file containing python rules') parser_sub.add_argument('--amplicon_primers',type=str,help='A file containing a list of amplicon primers') parser_sub.add_argument('--match_ref',type=str,help='The prefix for all output files') -parser_sub.add_argument('--custom',action="store_true",help='Tells the script this is a custom database, this is used to alter the generation of the version file') +parser_sub.add_argument('--custom',action="store_true",help='Tells the script this is a custom database, this is used to alter the generation of the version definition') parser_sub.add_argument('--db_name',help='Overrides the name of the database in the version file') parser_sub.add_argument('--db_commit',help='Overrides the commit string of the database in the version file') parser_sub.add_argument('--db_author',help='Overrides the author of the database in the version file') From 3fb42ac39791590342da6750bb7430da19e40f5b Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:07:50 +0000 Subject: [PATCH 20/53] update default database --- db/tbdb.bed | 58 - db/tbdb.dr.json | 270402 --------------- db/tbdb.mask.bed | 385 - db/tbdb.variables.json | 39 - db/tbdb.version.json | 1 - db/{tbdb.barcode.bed => who-v2.barcode.bed} | 0 db/who-v2.bed | 65 + db/who-v2.dict | 2 + db/who-v2.dr.json | 1 + db/{tbdb.fasta => who-v2.fasta} | 0 db/who-v2.fasta.fai | 1 + db/{tbdb.gff => who-v2.gff} | 8172 +- db/who-v2.mask.bed | 2292 + db/who-v2.rules.txt | 2 + ...e_list.csv => who-v2.spoligotype_list.csv} | 0 ...ers.txt => who-v2.spoligotype_spacers.txt} | 0 db/who-v2.variables.json | 1 + 17 files changed, 6450 insertions(+), 274971 deletions(-) delete mode 100644 db/tbdb.bed delete mode 100644 db/tbdb.dr.json delete mode 100644 db/tbdb.mask.bed delete mode 100644 db/tbdb.variables.json delete mode 100644 db/tbdb.version.json rename db/{tbdb.barcode.bed => who-v2.barcode.bed} (100%) create mode 100644 db/who-v2.bed create mode 100644 db/who-v2.dict create mode 100644 db/who-v2.dr.json rename db/{tbdb.fasta => who-v2.fasta} (100%) create mode 100644 db/who-v2.fasta.fai rename db/{tbdb.gff => who-v2.gff} (84%) create mode 100644 db/who-v2.mask.bed create mode 100644 db/who-v2.rules.txt rename db/{tbdb.spoligotype_list.csv => who-v2.spoligotype_list.csv} (100%) rename db/{tbdb.spoligotype_spacers.txt => who-v2.spoligotype_spacers.txt} (100%) create mode 100644 db/who-v2.variables.json diff --git a/db/tbdb.bed b/db/tbdb.bed deleted file mode 100644 index bfc23b1..0000000 --- a/db/tbdb.bed +++ /dev/null @@ -1,58 +0,0 @@ -Chromosome 5040 7467 Rv0005 gyrB fluoroquinolones,moxifloxacin,levofloxacin,ciprofloxacin,ofloxacin -Chromosome 7102 10018 Rv0006 gyrA fluoroquinolones,moxifloxacin,levofloxacin,ciprofloxacin,ofloxacin -Chromosome 490583 491993 Rv0407 fgd1 delamanid -Chromosome 575148 576990 Rv0486 mshA ethionamide,isoniazid -Chromosome 619691 621065 Rv0529 ccsA capreomycin,amikacin -Chromosome 759607 763525 Rv0667 rpoB rifampicin -Chromosome 763170 767520 Rv0668 rpoC rifampicin -Chromosome 775386 778680 Rv0676c mmpL5 clofazimine,bedaquiline -Chromosome 778277 779105 Rv0677c mmpS5 clofazimine,bedaquiline -Chromosome 778790 779687 Rv0678 mmpR5 clofazimine,bedaquiline -Chromosome 781360 782134 Rv0682 rpsL streptomycin -Chromosome 800609 801662 Rv0701 rplC linezolid -Chromosome 1302731 1305701 Rv1173 fbiC delamanid -Chromosome 1405881 1407540 Rv1258c Rv1258c streptomycin,pyrazinamide,isoniazid -Chromosome 1415981 1417547 Rv1267c embR ethambutol -Chromosome 1460845 1461490 Rv1305 atpE bedaquiline -Chromosome 1471646 1473582 EBG00000313325 rrs linezolid,kanamycin,capreomycin,amikacin,aminoglycosides,streptomycin -Chromosome 1473458 1476995 EBG00000313339 rrl linezolid -Chromosome 1673148 1674383 Rv1483 fabG1 ethionamide,isoniazid -Chromosome 1673848 1675211 Rv1484 inhA ethionamide,isoniazid -Chromosome 1833342 1835187 Rv1630 rpsA pyrazinamide -Chromosome 1917740 1918946 Rv1694 tlyA capreomycin -Chromosome 2101451 2103242 Rv1854c ndh ethionamide,isoniazid -Chromosome 2153689 2156570 Rv1908c katG isoniazid -Chromosome 2167449 2170812 Rv1918c PPE35 pyrazinamide -Chromosome 2221519 2223364 Rv1979c Rv1979c clofazimine,bedaquiline -Chromosome 2288481 2290323 Rv2043c pncA pyrazinamide -Chromosome 2517915 2519565 Rv2245 kasA isoniazid -Chromosome 2713924 2715586 Rv2416c eis kanamycin,amikacin -Chromosome 2725912 2726980 Rv2428 ahpC isoniazid -Chromosome 2745935 2747798 Rv2447c folC para-aminosalicylic_acid -Chromosome 2859100 2860618 Rv2535c pepQ clofazimine,bedaquiline -Chromosome 2986639 2987815 Rv2671 ribD para-aminosalicylic_acid -Chromosome 3064315 3066391 Rv2752c Rv2752c rifampicin,isoniazid -Chromosome 3066993 3068161 Rv2754c thyX para-aminosalicylic_acid -Chromosome 3073480 3074671 Rv2764c thyA para-aminosalicylic_acid -Chromosome 3086620 3088135 Rv2780 ald cycloserine -Chromosome 3338918 3339962 Rv2983 fbiD delamanid -Chromosome 3448304 3450191 Rv3083 Rv3083 ethionamide -Chromosome 3473807 3475577 Rv3106 fprA capreomycin,amikacin -Chromosome 3568201 3568879 Rv3197A whiB7 streptomycin,kanamycin,amikacin -Chromosome 3611759 3613316 Rv3236c Rv3236c pyrazinamide -Chromosome 3640343 3641738 Rv3261 fbiA delamanid -Chromosome 3641335 3643081 Rv3262 fbiB delamanid -Chromosome 3839994 3841620 Rv3423c alr cycloserine -Chromosome 3877264 3878707 Rv3457c rpoA rifampicin -Chromosome 3986644 3987499 Rv3547 ddn delamanid -Chromosome 4037958 4040904 Rv3596c clpC1 pyrazinamide -Chromosome 4043662 4044481 Rv3601c panD pyrazinamide -Chromosome 4239663 4243347 Rv3793 embC ethambutol -Chromosome 4243004 4246717 Rv3794 embA ethambutol -Chromosome 4246314 4250010 Rv3795 embB ethambutol -Chromosome 4266753 4269036 Rv3805c aftB capreomycin,amikacin -Chromosome 4268725 4270033 Rv3806c ubiA ethambutol -Chromosome 4325804 4330174 Rv3854c ethA ethionamide -Chromosome 4327349 4328399 Rv3855 ethR ethionamide -Chromosome 4337971 4338721 Rv3862c whiB6 streptomycin,capreomycin,amikacin -Chromosome 4407328 4408476 Rv3919c gid streptomycin diff --git a/db/tbdb.dr.json b/db/tbdb.dr.json deleted file mode 100644 index 15d9581..0000000 --- a/db/tbdb.dr.json +++ /dev/null @@ -1,270402 +0,0 @@ -{ - "Rv1694": { - "c.100delA": { - "annotations": [ - 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333437 336310 Rv0278c PE-PGRS_family_protein -Chromosome 336560 339073 Rv0279c PE-PGRS_family_protein -Chromosome 339364 340974 Rv0280 PPE_family_protein -Chromosome 349624 349932 Rv0285 PE_family_protein -Chromosome 349935 351476 Rv0286 PPE_family_protein -Chromosome 361334 363109 Rv0297 PE-PGRS_family_protein -Chromosome 366150 372764 Rv0304c PPE_family_protein -Chromosome 372820 375711 Rv0305c PPE_family_protein -Chromosome 399535 400050 Rv0335c PE_family_protein -Chromosome 400192 401703 Rv0336 50bp_duplicated -Chromosome 423639 424019 Rv0353 50bp_duplicated -Chromosome 424269 424694 Rv0354c PPE_family_protein -Chromosome 424777 434679 Rv0355c PPE_family_protein -Chromosome 466672 467406 Rv0387c PPE_family_protein -Chromosome 467459 468001 Rv0388c PPE_family_protein -Chromosome 472781 474106 Rv0393 50bp_duplicated -Chromosome 475816 476184 Rv0397 50bp_duplicated -Chromosome 530751 532214 Rv0442c PPE_family_protein -Chromosome 543174 544730 Rv0453 PPE_family_protein -Chromosome 576787 577338 Rv0487 50bp_duplicated -Chromosome 579349 580581 Rv0490 50bp_duplicated -Chromosome 606551 608062 Rv0515 50bp_duplicated -Chromosome 622793 624577 Rv0532 PE-PGRS_family_protein -Chromosome 630040 631686 Rv0538 50bp_duplicated -Chromosome 671996 675916 Rv0578c PE-PGRS_family_protein -Chromosome 701406 702014 Rv0605 repeat_region -Chromosome 701406 702014 Rv0605 resolvase -Chromosome 831776 832303 Rv0740 50bp_duplicated -Chromosome 832534 832848 Rv0741 transposase -Chromosome 832981 833508 Rv0742 PE-PGRS_family_protein -Chromosome 835701 838052 Rv0746 PE-PGRS_family_protein -Chromosome 838451 840856 Rv0747 PE-PGRS_family_protein -Chromosome 842033 842278 Rv0750 50bp_duplicated -Chromosome 846159 847913 Rv0754 PE-PGRS_family_protein -Chromosome 850342 850527 Rv0755A transposase -Chromosome 848103 850040 Rv0755c PPE_family_protein -Chromosome 889072 889398 Rv0795 transposase_IS6110 -Chromosome 889347 890333 Rv0796 transposase_IS6110 -Chromosome 890388 891482 Rv0797 50bp_duplicated -Chromosome 908181 908483 Rv0814c 50bp_duplicated -Chromosome 916477 917646 Rv0823c 50bp_duplicated -Chromosome 921575 921865 Rv0829 50bp_duplicated -Chromosome 924951 925364 Rv0832 PE-PGRS_family_protein -Chromosome 925361 927610 Rv0833 PE-PGRS_family_protein -Chromosome 927837 930485 Rv0834c PE-PGRS_family_protein -Chromosome 947312 947644 Rv0850 transposase -Chromosome 964312 965535 Rv0867c 50bp_duplicated -Chromosome 968424 970244 Rv0872c PE-PGRS_family_protein -Chromosome 976872 978203 Rv0878c PPE_family_protein -Chromosome 1020058 1021329 Rv0915c PPE_family_protein -Chromosome 1021344 1021643 Rv0916c PE_family_protein -Chromosome 1025497 1026816 Rv0920c transposase -Chromosome 1027104 1027685 Rv0921 resolvase -Chromosome 1027685 1029337 Rv0922 transposase -Chromosome 1090373 1093144 Rv0977 PE-PGRS_family_protein -Chromosome 1093361 1094356 Rv0978c PE-PGRS_family_protein -Chromosome 1095078 1096451 Rv0980c PE-PGRS_family_protein -Chromosome 1158918 1159307 Rv1034c transposase -Chromosome 1159375 1160061 Rv1035c transposase -Chromosome 1160095 1160433 Rv1036c truncated_IS1560_transposase -Chromosome 1160544 1160828 Rv1037c 50bp_duplicated -Chromosome 1160855 1161151 Rv1038c 50bp_duplicated -Chromosome 1161297 1162472 Rv1039c PPE_family_protein -Chromosome 1162549 1163376 Rv1040c PE_family_protein -Chromosome 1164572 1165435 Rv1041c IS_like-2_transposase -Chromosome 1165092 1165499 Rv1042c IS_like-2_transposase -Chromosome 1169423 1170670 Rv1047 transposase -Chromosome 1188421 1190424 Rv1067c PE-PGRS_family_protein -Chromosome 1190757 1192148 Rv1068c PE-PGRS_family_protein -Chromosome 1211560 1213863 Rv1087 PE-PGRS_family_protein -Chromosome 1214513 1214947 Rv1088 PE_family_protein -Chromosome 1214769 1215131 Rv1089 PE_family_protein -Chromosome 1216469 1219030 Rv1091 PE-PGRS_family_protein -Chromosome 1251617 1252972 Rv1128c repeat_region -Chromosome 1262272 1264128 Rv1135c PPE_family_protein -Chromosome 1276300 1277748 Rv1148c 50bp_duplicated -Chromosome 1277893 1278300 Rv1149 transposase -Chromosome 1278269 1278820 Rv1150 Possible_fragment_of_transposase_ -Chromosome 1298764 1299804 Rv1168c PPE_family_protein -Chromosome 1299822 1300124 Rv1169c PE_family_protein -Chromosome 1301755 1302681 Rv1172c PE_family_protein -Chromosome 1339003 1339302 Rv1195 PE_family_protein -Chromosome 1339349 1340524 Rv1196 PPE_family_protein -Chromosome 1340659 1340955 Rv1197 50bp_duplicated -Chromosome 1341006 1341290 Rv1198 50bp_duplicated -Chromosome 1341358 1342605 Rv1199c transposase -Chromosome 1357293 1357625 Rv1214c PE_family_protein -Chromosome 1384989 1386677 Rv1243c PE-PGRS_family_protein -Chromosome 1441348 1442718 Rv1288 50bp_duplicated -Chromosome 1450697 1451779 Rv1295 50bp_duplicated -Chromosome 1468171 1469505 Rv1313c transposase -Chromosome 1479199 1480824 Rv1318c 50bp_duplicated -Chromosome 1480894 1482501 Rv1319c 50bp_duplicated -Chromosome 1488154 1489965 Rv1325c PE-PGRS_family_protein -Chromosome 1532443 1533633 Rv1361c PPE_family_protein -Chromosome 1541994 1542980 Rv1369c transposase -Chromosome 1542929 1543255 Rv1370c transposase -Chromosome 1561464 1561772 Rv1386 PE_family_protein -Chromosome 1561769 1563388 Rv1387 PPE_family_protein -Chromosome 1572127 1573857 Rv1396c PE-PGRS_family_protein -Chromosome 1606386 1607972 Rv1430 PE_family_protein -Chromosome 1618209 1619684 Rv1441c PE-PGRS_family_protein -Chromosome 1630638 1634627 Rv1450c PE-PGRS_family_protein -Chromosome 1636004 1638229 Rv1452c PE-PGRS_family_protein -Chromosome 1643319 1644260 Rv1458c 50bp_duplicated -Chromosome 1655609 1656721 Rv1468c PE-PGRS_family_protein -Chromosome 1678942 1679172 Rv1489A 50bp_duplicated -Chromosome 1684005 1686257 Rv1493 50bp_duplicated -Chromosome 1751297 1753333 Rv1548c PPE_family_protein -Chromosome 1761744 1762937 Rv1557 repeat_region -Chromosome 1762947 1763393 Rv1558 repeat_region -Chromosome 1779194 1779298 Rv1572c repeat_region -Chromosome 1779930 1780241 Rv1574 repeat_region -Chromosome 1780199 1780699 Rv1575 repeat_region -Chromosome 1779314 1779724 Rv1573 phiRV1_phage_protein -Chromosome 1779930 1780241 Rv1574 phiRV1_phage_related_protein -Chromosome 1780199 1780699 Rv1575 phiRV1_phage_protein -Chromosome 1780643 1782064 Rv1576c phiRV1_phage_protein -Chromosome 1782072 1782584 Rv1577c phiRv1_phage_protein -Chromosome 1782758 1783228 Rv1578c phiRv1_phage_protein -Chromosome 1783309 1783623 Rv1579c phiRv1_phage_protein -Chromosome 1783620 1783892 Rv1580c phiRv1_phage_protein -Chromosome 1783906 1784301 Rv1581c phiRv1_phage_protein -Chromosome 1784497 1785912 Rv1582c phiRv1_phage_protein -Chromosome 1785912 1786310 Rv1583c phiRv1_phage_protein -Chromosome 1786307 1786528 Rv1584c phiRv1_phage_protein -Chromosome 1786584 1787099 Rv1585c phiRv1_phage_protein -Chromosome 1787096 1788505 Rv1586c phiRv1_integrase -Chromosome 1788162 1789163 Rv1587c REP13E12_repeat-containing_protein -Chromosome 1789168 1789836 Rv1588c REP13E12_repeat-containing_protein -Chromosome 1855764 1856696 Rv1646 PE_family_protein -Chromosome 1862347 1865382 Rv1651c PE-PGRS_family_protein -Chromosome 1927211 1928575 Rv1702c repeat_region -Chromosome 1931497 1932654 Rv1705c PPE_family_protein -Chromosome 1932694 1933878 Rv1706c PPE_family_protein -Chromosome 1981614 1984775 Rv1753c PPE_family_protein -Chromosome 1987745 1988731 Rv1756c putative_transposase -Chromosome 1988680 1989006 Rv1757c putative_transposase -Chromosome 1989042 1989566 Rv1758 putative_transposase -Chromosome 1989833 1992577 Rv1759c PE-PGRS_family_protein -Chromosome 1996152 1996478 Rv1763 putative_transposase -Chromosome 1996427 1997413 Rv1764 putative_transposase -Chromosome 1999142 1999357 Rv1765A transposase -Chromosome 1997418 1998515 Rv1765c 50bp_duplicated -Chromosome 2000614 2002470 Rv1768 PE-PGRS_family_protein -Chromosome 2025301 2026398 Rv1787 PPE_family_protein -Chromosome 2026477 2026776 Rv1788 PE_family_protein -Chromosome 2026790 2027971 Rv1789 PPE_family_protein -Chromosome 2028425 2029477 Rv1790 PPE_family_protein -Chromosome 2029904 2030203 Rv1791 PE_family_protein -Chromosome 2030694 2030978 Rv1793 50bp_duplicated -Chromosome 2039453 2041420 Rv1800 PPE_family_protein -Chromosome 2042001 2043272 Rv1801 PPE_family_protein -Chromosome 2043384 2044775 Rv1802 PPE_family_protein -Chromosome 2044923 2046842 Rv1803c PE-PGRS_family_protein -Chromosome 2048072 2048371 Rv1806 PE_family_protein -Chromosome 2048398 2049597 Rv1807 PPE_family_protein -Chromosome 2049921 2051150 Rv1808 PPE_family_protein -Chromosome 2051282 2052688 Rv1809 PPE_family_protein -Chromosome 2061178 2062674 Rv1818c PE-PGRS_family_protein -Chromosome 2073943 2074437 Rv1829 50bp_duplicated -Chromosome 2087971 2089518 Rv1840c PE-PGRS_family_protein -Chromosome 2156706 2157299 Rv1910c 50bp_duplicated -Chromosome 2157382 2157987 Rv1911c 50bp_duplicated -Chromosome 2162932 2167311 Rv1917c PPE_family_protein -Chromosome 2167649 2170612 Rv1918c PPE_family_protein -Chromosome 2195989 2197353 Rv1945 repeat_region -Chromosome 2226244 2227920 Rv1983 PE-PGRS_family_protein -Chromosome 2260665 2261144 Rv2013 transposase -Chromosome 2261098 2261688 Rv2014 transposase -Chromosome 2261816 2263072 Rv2015c 50bp_duplicated -Chromosome 2294531 2306986 Rv2048c 50bp_duplicated -Chromosome 2338709 2340874 Rv2082 50bp_duplicated -Chromosome 2343027 2343332 Rv2085 repeat_region -Chromosome 2347373 2348554 Rv2090 50bp_duplicated -Chromosome 2365465 2365791 Rv2105 transposase -Chromosome 2365740 2366726 Rv2106 transposase -Chromosome 2367359 2367655 Rv2107 PE_family_protein -Chromosome 2367711 2368442 Rv2108 PPE_family_protein -Chromosome 2370905 2372569 Rv2112c 50bp_duplicated -Chromosome 2381071 2382492 Rv2123 PPE_family_protein -Chromosome 2387202 2387972 Rv2126c PE-PGRS_family_protein -Chromosome 2423240 2424838 Rv2162c PE-PGRS_family_protein -Chromosome 2430159 2431145 Rv2167c transposase -Chromosome 2431094 2431420 Rv2168c transposase -Chromosome 2439282 2439947 Rv2177c transposase -Chromosome 2459678 2461327 Rv2196 50bp_duplicated -Chromosome 2530836 2531897 Rv2258c 50bp_duplicated -Chromosome 2549124 2550029 Rv2277c 50bp_duplicated -Chromosome 2550065 2550391 Rv2278 transposase -Chromosome 2550340 2551326 Rv2279 transposase -Chromosome 2600731 2601879 Rv2328 PE_family_protein -Chromosome 2617667 2618908 Rv2340c PE-PGRS_family_protein -Chromosome 2625888 2626172 Rv2346c 50bp_duplicated -Chromosome 2626223 2626519 Rv2347c 50bp_duplicated -Chromosome 2632923 2634098 Rv2352c PPE_family_protein -Chromosome 2634528 2635592 Rv2353c PPE_family_protein -Chromosome 2635628 2635954 Rv2354 transposase -Chromosome 2635903 2636889 Rv2355 transposase -Chromosome 2637688 2639535 Rv2356c PPE_family_protein -Chromosome 2651753 2651938 Rv2371 PE-PGRS_family_protein -Chromosome 2692799 2693884 Rv2396 PE-PGRS_family_protein -Chromosome 2706017 2706736 Rv2408 PE_family_protein -Chromosome 2720776 2721777 Rv2424c transposase -Chromosome 2727336 2727920 Rv2430c PPE_family_protein -Chromosome 2727967 2728266 Rv2431c PE_family_protein -Chromosome 2762531 2763175 Rv2460c repeat_region -Chromosome 2763172 2763774 Rv2461c repeat_region -Chromosome 2784657 2785643 Rv2479c transposase -Chromosome 2785592 2785918 Rv2480c transposase -Chromosome 2795301 2797385 Rv2487c PE-PGRS_family_protein -Chromosome 2800846 2801145 Rv2489c repeat_region -Chromosome 2801254 2806236 Rv2490c PE-PGRS_family_protein -Chromosome 2828556 2829803 Rv2512c IS1081_transposase -Chromosome 2835785 2837263 Rv2519 PE_family_protein -Chromosome 2866468 2867127 Rv2543 50bp_duplicated -Chromosome 2867124 2867786 Rv2544 50bp_duplicated -Chromosome 2921551 2923182 Rv2591 PE-PGRS_family_protein -Chromosome 2935046 2936788 Rv2608 PPE_family_protein -Chromosome 2943600 2944985 Rv2615c PE-PGRS_family_protein -Chromosome 2960105 2962441 Rv2634c PE-PGRS_family_protein -Chromosome 2972160 2972486 Rv2648 transposase_IS6110 -Chromosome 2972435 2973421 Rv2649 transposase_IS6110 -Chromosome 2973795 2975234 Rv2650c phiRv2_prophage_protein -Chromosome 2975242 2975775 Rv2651c phiRv2_prophage_protease -Chromosome 2975928 2976554 Rv2652c phiRv2_prophage_protein -Chromosome 2976586 2976909 Rv2653c phiRv2_prophage_protein -Chromosome 2976989 2977234 Rv2654c phiRv2_prophage_protein -Chromosome 2977231 2978658 Rv2655c phiRv2_prophage_protein -Chromosome 2978660 2979052 Rv2656c phiRv2_prophage_protein -Chromosome 2979049 2979309 Rv2657c phiRv2_prophage_protein -Chromosome 2979691 2980818 Rv2659c phiRv2_prophage_integrase -Chromosome 2982699 2982980 Rv2665 50bp_duplicated -Chromosome 2983071 2983874 Rv2666 truncated_IS1081_transposase -Chromosome 2989291 2990592 Rv2673 50bp_duplicated -Chromosome 2996105 2996737 Rv2680 50bp_duplicated -Chromosome 3005845 3007062 Rv2689c 50bp_duplicated -Chromosome 3007236 3009209 Rv2690c repeat_region -Chromosome 3053914 3055491 Rv2741 PE-PGRS_family_protein -Chromosome 3076894 3078078 Rv2768c PPE_family_protein -Chromosome 3078158 3078985 Rv2769c PE_family_protein -Chromosome 3079309 3080457 Rv2770c PPE_family_protein -Chromosome 3082352 3082756 Rv2774c 50bp_duplicated -Chromosome 3100202 3101581 Rv2791c transposase -Chromosome 3101581 3102162 Rv2792c resolvase -Chromosome 3112867 3113271 Rv2805 50bp_duplicated -Chromosome 3113658 3114812 Rv2807 50bp_duplicated -Chromosome 3115741 3116142 Rv2810c transposase -Chromosome 3116818 3118227 Rv2812 transposase -Chromosome 3120566 3121552 Rv2814c transposase -Chromosome 3121501 3121827 Rv2815c transposase -Chromosome 3132892 3133539 Rv2825c 50bp_duplicated -Chromosome 3135788 3136333 Rv2828c 50bp_duplicated -Chromosome 3162268 3164115 Rv2853 PE-PGRS_family_protein -Chromosome 3170720 3171646 Rv2859c 50bp_duplicated -Chromosome 3191644 3192201 Rv2882c 50bp_duplicated -Chromosome 3194166 3195548 Rv2885c transposase -Chromosome 3195545 3196432 Rv2886c resolvase -Chromosome 3200794 3202020 Rv2892c PPE_family_protein -Chromosome 3245445 3251075 Rv2931 50bp_duplicated -Chromosome 3251072 3255688 Rv2932 50bp_duplicated -Chromosome 3288464 3289705 Rv2943 IS1533_transposase -Chromosome 3289705 3290235 Rv2943A transposase -Chromosome 3289790 3290506 Rv2944 IS1533_transposase -Chromosome 3313283 3313672 Rv2961 transposase -Chromosome 3332787 3333788 Rv2977c 50bp_duplicated -Chromosome 3333785 3335164 Rv2978c transposase -Chromosome 3335164 3335748 Rv2979c resolvase -Chromosome 3335960 3336505 Rv2980 50bp_duplicated -Chromosome 3378329 3378415 Rv3018A PE_family_protein -Chromosome 3376939 3378243 Rv3018c PPE_family_protein -Chromosome 3379376 3380452 Rv3021c PPE_family_protein -Chromosome 3380679 3380993 Rv3022A PE_family_protein -Chromosome 3380440 3380682 Rv3022c PPE_family_protein -Chromosome 3381375 3382622 Rv3023c transposase -Chromosome 3465778 3467091 Rv3097c PE-PGRS_family_protein -Chromosome 3481451 3482698 Rv3115 transposase -Chromosome 3490476 3491651 Rv3125c PPE_family_protein -Chromosome 3501334 3501732 Rv3135 PPE_family_protein -Chromosome 3501794 3502936 Rv3136 PPE_family_protein -Chromosome 3510088 3511317 Rv3144c PPE_family_protein -Chromosome 3527391 3529163 Rv3159c PPE_family_protein -Chromosome 3551281 3551607 Rv3184 transposase -Chromosome 3551556 3552542 Rv3185 transposase -Chromosome 3552764 3553090 Rv3186 transposase -Chromosome 3553039 3554025 Rv3187 transposase -Chromosome 3557311 3558345 Rv3191c transposase -Chromosome 3663689 3664222 Rv3281 50bp_duplicated -Chromosome 3710433 3710759 Rv3325 transposase -Chromosome 3710708 3711694 Rv3326 transposase -Chromosome 3711749 3713461 Rv3327 transposase -Chromosome 3729364 3736935 Rv3343c PPE_family_protein -Chromosome 3736984 3738438 Rv3344c PE-PGRS_family_protein -Chromosome 3738158 3742774 Rv3345c PE-PGRS_family_protein -Chromosome 3743198 3743455 Rv3346c 50bp_duplicated -Chromosome 3743711 3753184 Rv3347c PPE_family_protein -Chromosome 3753765 3754256 Rv3348 transposase -Chromosome 3754293 3755033 Rv3349c transposase -Chromosome 3755952 3767102 Rv3350c PPE_family_protein -Chromosome 3769514 3769807 Rv3355c 50bp_duplicated -Chromosome 3778568 3780334 Rv3367 PE-PGRS_family_protein -Chromosome 3795100 3796086 Rv3380c transposase -Chromosome 3796035 3796361 Rv3381c transposase -Chromosome 3800092 3800796 Rv3386 transposase -Chromosome 3800786 3801463 Rv3387 transposase -Chromosome 3801653 3803848 Rv3388 PE-PGRS_family_protein -Chromosome 3841714 3842076 Rv3424c 50bp_duplicated -Chromosome 3842239 3842769 Rv3425 PPE_family_protein -Chromosome 3843036 3843734 Rv3426 PPE_family_protein -Chromosome 3843885 3844640 Rv3427c transposase -Chromosome 3844738 3845970 Rv3428c transposase -Chromosome 3847165 3847701 Rv3429 PPE_family_protein -Chromosome 3847642 3848805 Rv3430c transposase -Chromosome 3849294 3850139 Rv3431c repeat_region -Chromosome 3883525 3884193 Rv3466 repeat_region -Chromosome 3883964 3884917 Rv3467 repeat_region -Chromosome 3890830 3891156 Rv3474 transposase_IS6110 -Chromosome 3891105 3892091 Rv3475 transposase_IS6110 -Chromosome 3894093 3894389 Rv3477 PE_family_protein -Chromosome 3894426 3895607 Rv3478 PE_family_protein -Chromosome 3926569 3930714 Rv3507 PE-PGRS_family_protein -Chromosome 3931005 3936710 Rv3508 PE-PGRS_family_protein -Chromosome 3939617 3941761 Rv3511 PE-PGRS_family_protein -Chromosome 3941724 3944963 Rv3512 PE-PGRS_family_protein -Chromosome 3945092 3945748 Rv3513c 50bp_duplicated -Chromosome 3945794 3950263 Rv3514 PE-PGRS_family_protein -Chromosome 3950824 3952470 Rv3515c 50bp_duplicated -Chromosome 3969343 3970563 Rv3532 PPE_family_protein -Chromosome 3970705 3972453 Rv3533c PPE_family_protein -Chromosome 3978059 3979498 Rv3539 PPE_family_protein -Chromosome 3997980 3999638 Rv3558 PPE_family_protein -Chromosome 4031404 4033158 Rv3590c PE-PGRS_family_protein -Chromosome 4036731 4038050 Rv3595c PE-PGRS_family_protein -Chromosome 4052950 4053603 Rv3611 50bp_duplicated -Chromosome 4059984 4060268 Rv3619c 50bp_duplicated -Chromosome 4060295 4060591 Rv3620c 50bp_duplicated -Chromosome 4060648 4061889 Rv3621c PPE_family_protein -Chromosome 4061899 4062198 Rv3622c PE_family_protein -Chromosome 4075752 4076099 Rv3636 transposase -Chromosome 4076484 4076984 Rv3637 transposase -Chromosome 4076984 4077730 Rv3638 transposase -Chromosome 4077884 4078450 Rv3639c 50bp_duplicated -Chromosome 4078520 4079749 Rv3640c transposase -Chromosome 4091233 4091517 Rv3650 PE_family_protein -Chromosome 4119795 4120955 Rv3680 50bp_duplicated -Chromosome 4153740 4155674 Rv3710 50bp_duplicated -Chromosome 4189285 4190232 Rv3738c PPE_family_protein -Chromosome 4190284 4190517 Rv3739c PPE_family_protein -Chromosome 4196171 4196506 Rv3746c PE_family_protein -Chromosome 4252993 4254327 Rv3798 transposase -Chromosome 4276571 4278085 Rv3812 PE-PGRS_family_protein -Chromosome 4299812 4301566 Rv3826 50bp_duplicated -Chromosome 4301563 4302789 Rv3827c transposase -Chromosome 4302786 4303397 Rv3828c resolvase -Chromosome 4318775 4319266 Rv3844 transposase -Chromosome 4351075 4352181 Rv3873 PPE_family_protein -Chromosome 4353010 4355010 Rv3876 50bp_duplicated -Chromosome 4374484 4375683 Rv3892c PPE_family_protein -Chromosome 4375762 4375995 Rv3893c PE_family_protein -Chromosome 1306002 1306201 IG1195_Rv1174c-Rv1175c -Chromosome 154130 154231 IG127_Rv0126-Rv0127 -Chromosome 1907321 1907593 IG1711_Rv1682-Rv1683 -Chromosome 23182 23269 IG18_Rv0018c-Rv0019c -Chromosome 3318816 3318900 IG3012_Rv2965c-Rv2966c -Chromosome 3319468 3319662 IG3013_Rv2966c-Rv2967c -Chromosome 616832 616845 IG533_Rv0525-Rv0526 -Chromosome 642812 642888 IG559_Rv0551c-Rv0552 -Chromosome 706930 706947 IG622_Rv0612-Rv0613c -Chromosome 80194 80623 IG71_Rv0071-Rv0072 -Chromosome 863159 863255 IG784_Rv0769-Rv0770 -Chromosome 960152 960341 IG877_Rv0861c-Rv0862c -Chromosome 4093940 4094527 Rv3653 PE_family_protein diff --git a/db/tbdb.variables.json b/db/tbdb.variables.json deleted file mode 100644 index 320762a..0000000 --- a/db/tbdb.variables.json +++ /dev/null @@ -1,39 +0,0 @@ -{ - "snpEff_db": "Mycobacterium_tuberculosis_h37rv", - "drugs": [ - "rifampicin", - "isoniazid", - "ethambutol", - "pyrazinamide", - "streptomycin", - "fluoroquinolones", - "moxifloxacin", - "ofloxacin", - "levofloxacin", - "ciprofloxacin", - "aminoglycosides", - "amikacin", - "capreomycin", - "kanamycin", - "cycloserine", - "ethionamide", - "clofazimine", - "para-aminosalicylic_acid", - "delamanid", - "bedaquiline", - "linezolid" - ], - "amplicon": false, - "files": { - "ref": "tbdb.fasta", - "gff": "tbdb.gff", - "bed": "tbdb.bed", - "version": "tbdb.version.json", - "json_db": "tbdb.dr.json", - "variables": "tbdb.variables.json", - "spoligotype_spacers": "tbdb.spoligotype_spacers.txt", - "spoligotype_annotations": "tbdb.spoligotype_list.csv", - "bedmask": "tbdb.mask.bed", - "barcode": "tbdb.barcode.bed" - } -} diff --git a/db/tbdb.version.json b/db/tbdb.version.json deleted file mode 100644 index ffba34d..0000000 --- a/db/tbdb.version.json +++ /dev/null @@ -1 +0,0 @@ -{"name": "tbdb", "commit": "c2fb9a2", "Author": "jodyphelan ", "Date": "Tue Oct 4 11:40:15 2022 +0100"} \ No newline at end of file diff --git a/db/tbdb.barcode.bed b/db/who-v2.barcode.bed similarity index 100% rename from db/tbdb.barcode.bed rename to db/who-v2.barcode.bed diff --git a/db/who-v2.bed b/db/who-v2.bed new file mode 100644 index 0000000..6d0275f --- /dev/null +++ b/db/who-v2.bed @@ -0,0 +1,65 @@ +Chromosome 1 1524 Rv0001 dnaA isoniazid +Chromosome 4933 7267 Rv0005 gyrB levofloxacin,moxifloxacin +Chromosome 7068 9818 Rv0006 gyrA levofloxacin,moxifloxacin +Chromosome 13133 13911 Rv0010c Rv0010c isoniazid +Chromosome 490545 491793 Rv0407 fgd1 clofazimine,delamanid +Chromosome 574479 576790 Rv0486 mshA isoniazid,ethionamide +Chromosome 619500 620865 Rv0529 ccsA kanamycin,amikacin,capreomycin +Chromosome 656010 657739 Rv0565c Rv0565c ethionamide +Chromosome 731680 732406 Rv0635 hadA isoniazid +Chromosome 733853 734970 Rv0639 nusG rifampicin +Chromosome 759342 763325 Rv0667 rpoB rifampicin +Chromosome 763127 767320 Rv0668 rpoC rifampicin +Chromosome 775586 778680 Rv0676c mmpL5 clofazimine,bedaquiline +Chromosome 778477 779624 Rv0677c mmpS5 clofazimine,bedaquiline +Chromosome 778790 779487 Rv0678 mmpR5 clofazimine,bedaquiline +Chromosome 781126 781934 Rv0682 rpsL streptomycin +Chromosome 800106 801462 Rv0701 rplC linezolid +Chromosome 1253074 1254783 Rv1129c Rv1129c rifampicin,levofloxacin,moxifloxacin,isoniazid +Chromosome 1302606 1305501 Rv1173 fbiC clofazimine,delamanid +Chromosome 1364162 1365186 Rv1221 sigE pyrazinamide +Chromosome 1406081 1407604 Rv1258c Rv1258c streptomycin,isoniazid,pyrazinamide +Chromosome 1416181 1418048 Rv1267c embR ethambutol +Chromosome 1460802 1461290 Rv1305 atpE bedaquiline +Chromosome 1471498 1473382 EBG00000313325 rrs kanamycin,amikacin,capreomycin,streptomycin +Chromosome 1473408 1476795 EBG00000313339 rrl linezolid,capreomycin +Chromosome 1673189 1675011 Rv1484 inhA isoniazid,ethionamide +Chromosome 1833247 1834987 Rv1630 rpsA pyrazinamide +Chromosome 1853358 1854388 Rv1644 tsnR linezolid +Chromosome 1917506 1918746 Rv1694 tlyA capreomycin +Chromosome 2062809 2065010 Rv1819c bacA kanamycin,amikacin,capreomycin,streptomycin +Chromosome 2101651 2103337 Rv1854c ndh ethionamide,isoniazid,delamanid +Chromosome 2153889 2156842 Rv1908c katG isoniazid +Chromosome 2167649 2170934 Rv1918c PPE35 pyrazinamide +Chromosome 2221719 2223825 Rv1979c Rv1979c clofazimine,bedaquiline +Chromosome 2288681 2289480 Rv2043c pncA pyrazinamide +Chromosome 2714124 2715832 Rv2416c eis kanamycin,amikacin +Chromosome 2725899 2726780 Rv2428 ahpC isoniazid +Chromosome 2782366 2786169 Rv2477c Rv2477c rifampicin,ethambutol,streptomycin,kanamycin,amikacin,moxifloxacin,levofloxacin +Chromosome 2859300 2860640 Rv2535c pepQ clofazimine,bedaquiline +Chromosome 2995772 2996737 Rv2680 Rv2680 capreomycin +Chromosome 2996539 2998055 Rv2681 Rv2681 capreomycin +Chromosome 3064515 3067372 Rv2752c Rv2752c rifampicin,ethambutol,isoniazid,moxifloxacin,levofloxacin +Chromosome 3338868 3339762 Rv2983 fbiD clofazimine,delamanid +Chromosome 3448253 3449991 Rv3083 Rv3083 ethionamide +Chromosome 3568401 3569280 Rv3197A whiB7 kanamycin,amikacin,streptomycin +Chromosome 3611959 3613847 Rv3236c Rv3236c pyrazinamide +Chromosome 3623159 3625110 Rv3244c lpqB rifampicin,bedaquiline +Chromosome 3624910 3626860 Rv3245c mtrB rifampicin,bedaquiline +Chromosome 3626663 3627924 Rv3246c mtrA rifampicin,bedaquiline +Chromosome 3640207 3641538 Rv3261 fbiA clofazimine,delamanid +Chromosome 3641335 3642881 Rv3262 fbiB clofazimine,delamanid +Chromosome 3877464 3879240 Rv3457c rpoA rifampicin +Chromosome 3986612 3987299 Rv3547 ddn delamanid +Chromosome 4038158 4041013 Rv3596c clpC1 pyrazinamide +Chromosome 4043862 4046428 Rv3601c panD pyrazinamide +Chromosome 4138202 4140002 Rv3696c glpK rifampicin,ethambutol,streptomycin,isoniazid,moxifloxacin,levofloxacin +Chromosome 4237683 4243147 Rv3793 embC ethambutol +Chromosome 4242947 4246517 Rv3794 embA ethambutol +Chromosome 4246314 4249810 Rv3795 embB ethambutol +Chromosome 4266953 4269124 Rv3805c aftB ethambutol +Chromosome 4268925 4270084 Rv3806c ubiA ethambutol +Chromosome 4326004 4327723 Rv3854c ethA ethionamide +Chromosome 4327328 4328199 Rv3855 ethR ethionamide +Chromosome 4338171 4338961 Rv3862c whiB6 kanamycin,amikacin,capreomycin +Chromosome 4407528 4408481 Rv3919c gid streptomycin diff --git a/db/who-v2.dict b/db/who-v2.dict new file mode 100644 index 0000000..6919b88 --- /dev/null +++ b/db/who-v2.dict @@ -0,0 +1,2 @@ +@HD VN:1.0 SO:unsorted +@SQ SN:Chromosome LN:4411532 M5:57b12ff2773c5fd3a0f879972f176e50 UR:file:///Users/jody/mambaforge/envs/pp/share/tbprofiler/whov2.fasta diff --git a/db/who-v2.dr.json b/db/who-v2.dr.json new file mode 100644 index 0000000..acfe185 --- /dev/null +++ b/db/who-v2.dr.json @@ -0,0 +1 @@ +{"Rv1819c": {"c.102G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064627], "chromosome": "Chromosome"}, "c.1044G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063685], "chromosome": "Chromosome"}, "c.105C>G": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064624], "chromosome": "Chromosome"}, "c.1065T>G": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063664], "chromosome": "Chromosome"}, "c.1080G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063649], "chromosome": "Chromosome"}, "c.1140G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063589], "chromosome": "Chromosome"}, "c.1170G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063559], "chromosome": "Chromosome"}, "c.1194C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063535], "chromosome": "Chromosome"}, "c.1210C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1210C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1210C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1210C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063519], "chromosome": "Chromosome"}, "c.1212G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1212G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1212G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1212G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063517], "chromosome": "Chromosome"}, "c.1212G>C": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1212G>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1212G>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1212G>C", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063517], "chromosome": "Chromosome"}, "c.1242G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1242G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1242G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1242G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1242G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063487], "chromosome": "Chromosome"}, "c.129T>C": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.129T>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.129T>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.129T>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.129T>C", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064600], "chromosome": "Chromosome"}, "c.1317C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1317C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1317C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1317C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063412], "chromosome": "Chromosome"}, "c.1323G>C": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1323G>C", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1323G>C", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063406], "chromosome": "Chromosome"}, "c.1348C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1348C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1348C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1348C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1348C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063381], "chromosome": "Chromosome"}, "c.135G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.135G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.135G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064594], "chromosome": "Chromosome"}, "c.1371G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1371G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1371G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1371G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063358], "chromosome": "Chromosome"}, "c.1374C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1374C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1374C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1374C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063355], "chromosome": "Chromosome"}, "c.138C>G": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.138C>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.138C>G", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.138C>G", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064591], "chromosome": "Chromosome"}, "c.1405C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1405C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1405C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1405C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063324], "chromosome": "Chromosome"}, "c.1426C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1426C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1426C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1426C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063303], "chromosome": "Chromosome"}, "c.1428G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1428G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1428G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1428G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1428G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063301], "chromosome": "Chromosome"}, "c.1527C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1527C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1527C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1527C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063202], "chromosome": "Chromosome"}, "c.1533G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1533G>A", 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"who_confidence", "drug": "streptomycin", "original_mutation": "c.1542C>T", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063187], "chromosome": "Chromosome"}, "c.1563C>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1563C>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1563C>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2063166], "chromosome": "Chromosome"}, "c.1572C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1572C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1572C>T", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1572C>T", "confidence": "Not assoc w R - Interim", 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Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln51Lys": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln51Lys", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln51Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln51Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln51Pro", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln51Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln76Arg": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Arg", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln76Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76Glu": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Glu", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln76Glu", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76Lys": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76*": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln76*", "confidence": "Assoc w R - 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[{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "LoF", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": null, "chromosome": "Chromosome"}, "frameshift_variant": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "LoF", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": null, "chromosome": "Chromosome"}, "p.Ala113Gly": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ala113Gly", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781896, 781897, 781898], "chromosome": "Chromosome"}, "p.Arg114Cys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg114Cys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781899, 781900, 781901], "chromosome": "Chromosome"}, "p.Arg116His": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg116His", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781905, 781906, 781907], "chromosome": "Chromosome"}, "p.Arg30Cys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg30Cys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781647, 781648, 781649], "chromosome": "Chromosome"}, "p.Arg86Gln": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg86Gln", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781815, 781816, 781817], "chromosome": "Chromosome"}, "p.Arg86Gly": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg86Gly", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781815, 781816, 781817], "chromosome": "Chromosome"}, "p.Arg94Cys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Arg94Cys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781839, 781840, 781841], "chromosome": "Chromosome"}, "p.Asn73Lys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Asn73Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781776, 781777, 781778], "chromosome": "Chromosome"}, "p.Asp14Glu": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Asp14Glu", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781599, 781600, 781601], "chromosome": "Chromosome"}, "p.Asp14Tyr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Asp14Tyr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781599, 781600, 781601], "chromosome": "Chromosome"}, "p.Gln105Glu": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gln105Glu", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781872, 781873, 781874], "chromosome": "Chromosome"}, "p.Glu122Lys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Glu122Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781923, 781924, 781925], "chromosome": "Chromosome"}, "p.Glu70Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Glu70Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781767, 781768, 781769], "chromosome": "Chromosome"}, "p.Glu76Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Glu76Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781785, 781786, 781787], "chromosome": "Chromosome"}, "p.Gly100Ser": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gly100Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781857, 781858, 781859], "chromosome": "Chromosome"}, "p.Gly106Cys": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gly106Cys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781875, 781876, 781877], "chromosome": "Chromosome"}, "p.Gly124Ser": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gly124Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781929, 781930, 781931], "chromosome": "Chromosome"}, "p.Gly71Asp": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gly71Asp", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781770, 781771, 781772], "chromosome": "Chromosome"}, "p.Gly71Ser": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Gly71Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781770, 781771, 781772], "chromosome": "Chromosome"}, "p.Ile16Thr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ile16Thr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781605, 781606, 781607], "chromosome": "Chromosome"}, "p.Ile16Val": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ile16Val", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781605, 781606, 781607], "chromosome": "Chromosome"}, "p.Lys108Thr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys108Thr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781881, 781882, 781883], "chromosome": "Chromosome"}, "p.Lys10Thr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys10Thr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781587, 781588, 781589], "chromosome": "Chromosome"}, "p.Lys123*": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys123*", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781926, 781927, 781928], "chromosome": "Chromosome"}, "p.Lys43Arg": {"annotations": [{"type": "drug_resistance", "drug": "streptomycin", "original_mutation": "p.Lys43Arg", "confidence": "Assoc w R", "comment": ""}], "genome_positions": [781686, 781687, 781688], "chromosome": "Chromosome"}, "p.Lys43Asn": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys43Asn", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781686, 781687, 781688], "chromosome": "Chromosome"}, "p.Lys43Met": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys43Met", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781686, 781687, 781688], "chromosome": "Chromosome"}, "p.Lys43Thr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys43Thr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781686, 781687, 781688], "chromosome": "Chromosome"}, "p.Lys88Arg": {"annotations": [{"type": "drug_resistance", "drug": "streptomycin", "original_mutation": "p.Lys88Arg", "confidence": "Assoc w R", "comment": ""}], "genome_positions": [781821, 781822, 781823], "chromosome": "Chromosome"}, "p.Lys88Gln": {"annotations": [{"type": "drug_resistance", "drug": "streptomycin", "original_mutation": "p.Lys88Gln", "confidence": "Assoc w R - Interim", "comment": ""}], "genome_positions": [781821, 781822, 781823], "chromosome": "Chromosome"}, "p.Lys88Met": {"annotations": [{"type": "drug_resistance", "drug": "streptomycin", "original_mutation": "p.Lys88Met", "confidence": "Assoc w R", "comment": ""}], "genome_positions": [781821, 781822, 781823], "chromosome": "Chromosome"}, "p.Lys88Thr": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Lys88Thr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781821, 781822, 781823], "chromosome": "Chromosome"}, "p.Pro2Arg": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Pro2Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781563, 781564, 781565], "chromosome": "Chromosome"}, "p.Pro2Ser": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Pro2Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781563, 781564, 781565], "chromosome": "Chromosome"}, "p.Pro91Ser": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Pro91Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781830, 781831, 781832], "chromosome": "Chromosome"}, "p.Ser101Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ser101Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781860, 781861, 781862], "chromosome": "Chromosome"}, "p.Ser17Arg": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ser17Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781608, 781609, 781610], "chromosome": "Chromosome"}, "p.Ser17Asn": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ser17Asn", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781608, 781609, 781610], "chromosome": "Chromosome"}, "p.Ser17Ile": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Ser17Ile", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781608, 781609, 781610], "chromosome": "Chromosome"}, "p.Thr104Met": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Thr104Met", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781869, 781870, 781871], "chromosome": "Chromosome"}, "p.Thr35Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Thr35Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781662, 781663, 781664], "chromosome": "Chromosome"}, "p.Thr40Ile": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Thr40Ile", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781677, 781678, 781679], "chromosome": "Chromosome"}, "p.Thr58Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Thr58Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781731, 781732, 781733], "chromosome": "Chromosome"}, "p.Thr64Met": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Thr64Met", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781749, 781750, 781751], "chromosome": "Chromosome"}, "p.Val107Ala": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Val107Ala", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781878, 781879, 781880], "chromosome": "Chromosome"}, "p.Val55Met": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Val55Met", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781722, 781723, 781724], "chromosome": "Chromosome"}, "p.Val63Ile": {"annotations": [{"type": "who_confidence", "drug": "streptomycin", "original_mutation": "p.Val63Ile", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781746, 781747, 781748], "chromosome": "Chromosome"}}} \ No newline at end of file diff --git a/db/tbdb.fasta b/db/who-v2.fasta similarity index 100% rename from db/tbdb.fasta rename to db/who-v2.fasta diff --git a/db/who-v2.fasta.fai b/db/who-v2.fasta.fai new file mode 100644 index 0000000..d80b5e4 --- /dev/null +++ b/db/who-v2.fasta.fai @@ -0,0 +1 @@ +Chromosome 4411532 77 60 61 diff --git a/db/tbdb.gff b/db/who-v2.gff similarity index 84% rename from db/tbdb.gff rename to db/who-v2.gff index acc3e79..5177962 100644 --- a/db/tbdb.gff +++ b/db/who-v2.gff @@ -5,39 +5,39 @@ #!genome-date 2015-02 #!genome-build-accession GCA_000195955.2 #!genebuild-last-updated 2015-02 -Chromosome ena gene 1 1524 . + . ID=gene:Rv0001;Name=dnaA;biotype=protein_coding;description=Chromosomal replication initiator protein DnaA;gene_id=Rv0001;logic_name=ena +Chromosome ena gene 1 1524 . + . ID=gene:Rv0001;Name=dnaA;biotype=protein_coding;description=Chromosomal replication initiator protein DnaA;gene_id=Rv0001;logic_name=ena Chromosome ena mRNA 1 1524 . + . ID=transcript:Rv0001;Parent=gene:Rv0001;Name=dnaA-1;biotype=protein_coding;transcript_id=Rv0001 Chromosome ena exon 1 1524 . + . Parent=transcript:Rv0001;Name=Rv0001-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0001-1;rank=1 Chromosome ena CDS 1 1524 . + 0 ID=CDS:Rv0001;Parent=transcript:Rv0001;protein_id=Rv0001 ### -Chromosome European Nucleotide Archive chromosome 1 4411532 . . . ID=chromosome:Chromosome;Alias=AL123456.3 +Chromosome European Nucleotide Archive chromosome 1 4411532 . . . ID=chromosome:Chromosome;Alias=AL123456.3 ### -Chromosome ena gene 2052 3260 . + . ID=gene:Rv0002;Name=dnaN;biotype=protein_coding;description=DNA polymerase III (beta chain) DnaN (DNA nucleotidyltransferase);gene_id=Rv0002;logic_name=ena +Chromosome ena gene 2052 3260 . + . ID=gene:Rv0002;Name=dnaN;biotype=protein_coding;description=DNA polymerase III (beta chain) DnaN (DNA nucleotidyltransferase);gene_id=Rv0002;logic_name=ena Chromosome ena mRNA 2052 3260 . + . ID=transcript:Rv0002;Parent=gene:Rv0002;Name=dnaN-1;biotype=protein_coding;transcript_id=Rv0002 Chromosome ena exon 2052 3260 . + . Parent=transcript:Rv0002;Name=Rv0002-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0002-1;rank=1 Chromosome ena CDS 2052 3260 . + 0 ID=CDS:Rv0002;Parent=transcript:Rv0002;protein_id=Rv0002 ### -Chromosome ena gene 3280 4437 . + . ID=gene:Rv0003;Name=recF;biotype=protein_coding;description=DNA replication and repair protein RecF (single-strand DNA binding protein);gene_id=Rv0003;logic_name=ena +Chromosome ena gene 3280 4437 . + . ID=gene:Rv0003;Name=recF;biotype=protein_coding;description=DNA replication and repair protein RecF (single-strand DNA binding protein);gene_id=Rv0003;logic_name=ena Chromosome ena mRNA 3280 4437 . + . ID=transcript:Rv0003;Parent=gene:Rv0003;Name=recF-1;biotype=protein_coding;transcript_id=Rv0003 Chromosome ena exon 3280 4437 . + . Parent=transcript:Rv0003;Name=Rv0003-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0003-1;rank=1 Chromosome ena CDS 3280 4437 . + 0 ID=CDS:Rv0003;Parent=transcript:Rv0003;protein_id=Rv0003 ### -Chromosome ena gene 4434 4997 . + . ID=gene:Rv0004;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0004;logic_name=ena +Chromosome ena gene 4434 4997 . + . ID=gene:Rv0004;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0004;logic_name=ena Chromosome ena mRNA 4434 4997 . + . ID=transcript:Rv0004;Parent=gene:Rv0004;biotype=protein_coding;transcript_id=Rv0004 Chromosome ena exon 4434 4997 . + . Parent=transcript:Rv0004;Name=Rv0004-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0004-1;rank=1 Chromosome ena CDS 4434 4997 . + 0 ID=CDS:Rv0004;Parent=transcript:Rv0004;protein_id=Rv0004 ### -Chromosome ena gene 5240 7267 . + . ID=gene:Rv0005;Name=gyrB;biotype=protein_coding;description=DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase);gene_id=Rv0005;logic_name=ena +Chromosome ena gene 5240 7267 . + . ID=gene:Rv0005;Name=gyrB;biotype=protein_coding;description=DNA gyrase (subunit B) GyrB (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase);gene_id=Rv0005;logic_name=ena Chromosome ena mRNA 5240 7267 . + . ID=transcript:Rv0005;Parent=gene:Rv0005;Name=gyrB-1;biotype=protein_coding;transcript_id=Rv0005 Chromosome ena exon 5240 7267 . + . Parent=transcript:Rv0005;Name=Rv0005-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0005-1;rank=1 Chromosome ena CDS 5240 7267 . + 0 ID=CDS:Rv0005;Parent=transcript:Rv0005;protein_id=Rv0005 ### -Chromosome ena gene 7302 9818 . + . ID=gene:Rv0006;Name=gyrA;biotype=protein_coding;description=DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase);gene_id=Rv0006;logic_name=ena +Chromosome ena gene 7302 9818 . + . ID=gene:Rv0006;Name=gyrA;biotype=protein_coding;description=DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase);gene_id=Rv0006;logic_name=ena Chromosome ena mRNA 7302 9818 . + . ID=transcript:Rv0006;Parent=gene:Rv0006;Name=gyrA-1;biotype=protein_coding;transcript_id=Rv0006 Chromosome ena exon 7302 9818 . + . Parent=transcript:Rv0006;Name=Rv0006-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0006-1;rank=1 Chromosome ena CDS 7302 9818 . + 0 ID=CDS:Rv0006;Parent=transcript:Rv0006;protein_id=Rv0006 ### -Chromosome ena gene 9914 10828 . + . ID=gene:Rv0007;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0007;logic_name=ena +Chromosome ena gene 9914 10828 . + . ID=gene:Rv0007;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0007;logic_name=ena Chromosome ena mRNA 9914 10828 . + . ID=transcript:Rv0007;Parent=gene:Rv0007;biotype=protein_coding;transcript_id=Rv0007 Chromosome ena exon 9914 10828 . + . Parent=transcript:Rv0007;Name=Rv0007-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0007-1;rank=1 Chromosome ena CDS 9914 10828 . + 0 ID=CDS:Rv0007;Parent=transcript:Rv0007;protein_id=Rv0007 @@ -52,67 +52,67 @@ Chromosome ena transcript 11112 11184 . + . ID=transcript:EBG00000313365;Parent= Chromosome ena exon 11112 11184 . + . Parent=transcript:EBG00000313365;Name=EBG00000313365;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313365;rank=1 ### Chromosome ena_gene biological_region 11112 11184 . + . external_name=AL123456.3:gene:11112..11184;logic_name=ena_gene -Chromosome ena gene 11874 12311 . - . ID=gene:Rv0008c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0008c;logic_name=ena +Chromosome ena gene 11874 12311 . - . ID=gene:Rv0008c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0008c;logic_name=ena Chromosome ena mRNA 11874 12311 . - . ID=transcript:Rv0008c;Parent=gene:Rv0008c;biotype=protein_coding;transcript_id=Rv0008c Chromosome ena exon 11874 12311 . - . Parent=transcript:Rv0008c;Name=Rv0008c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0008c-1;rank=1 Chromosome ena CDS 11874 12311 . - 0 ID=CDS:Rv0008c;Parent=transcript:Rv0008c;protein_id=Rv0008c ### -Chromosome ena gene 12468 13016 . + . ID=gene:Rv0009;Name=ppiA;biotype=protein_coding;description=Probable iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA (PPIase A) (rotamase A);gene_id=Rv0009;logic_name=ena +Chromosome ena gene 12468 13016 . + . ID=gene:Rv0009;Name=ppiA;biotype=protein_coding;description=Probable iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA (PPIase A) (rotamase A);gene_id=Rv0009;logic_name=ena Chromosome ena mRNA 12468 13016 . + . ID=transcript:Rv0009;Parent=gene:Rv0009;Name=ppiA-1;biotype=protein_coding;transcript_id=Rv0009 Chromosome ena exon 12468 13016 . + . Parent=transcript:Rv0009;Name=Rv0009-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0009-1;rank=1 Chromosome ena CDS 12468 13016 . + 0 ID=CDS:Rv0009;Parent=transcript:Rv0009;protein_id=Rv0009 ### -Chromosome ena gene 13133 13558 . - . ID=gene:Rv0010c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0010c;logic_name=ena +Chromosome ena gene 13133 13558 . - . ID=gene:Rv0010c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0010c;logic_name=ena Chromosome ena mRNA 13133 13558 . - . ID=transcript:Rv0010c;Parent=gene:Rv0010c;biotype=protein_coding;transcript_id=Rv0010c Chromosome ena exon 13133 13558 . - . Parent=transcript:Rv0010c;Name=Rv0010c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0010c-1;rank=1 Chromosome ena CDS 13133 13558 . - 0 ID=CDS:Rv0010c;Parent=transcript:Rv0010c;protein_id=Rv0010c ### -Chromosome ena gene 13714 13995 . - . ID=gene:Rv0011c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0011c;logic_name=ena +Chromosome ena gene 13714 13995 . - . ID=gene:Rv0011c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0011c;logic_name=ena Chromosome ena mRNA 13714 13995 . - . ID=transcript:Rv0011c;Parent=gene:Rv0011c;biotype=protein_coding;transcript_id=Rv0011c Chromosome ena exon 13714 13995 . - . Parent=transcript:Rv0011c;Name=Rv0011c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0011c-1;rank=1 Chromosome ena CDS 13714 13995 . - 0 ID=CDS:Rv0011c;Parent=transcript:Rv0011c;protein_id=Rv0011c ### -Chromosome ena gene 14089 14877 . + . ID=gene:Rv0012;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0012;logic_name=ena +Chromosome ena gene 14089 14877 . + . ID=gene:Rv0012;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0012;logic_name=ena Chromosome ena mRNA 14089 14877 . + . ID=transcript:Rv0012;Parent=gene:Rv0012;biotype=protein_coding;transcript_id=Rv0012 Chromosome ena exon 14089 14877 . + . Parent=transcript:Rv0012;Name=Rv0012-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0012-1;rank=1 Chromosome ena CDS 14089 14877 . + 0 ID=CDS:Rv0012;Parent=transcript:Rv0012;protein_id=Rv0012 ### -Chromosome ena gene 14914 15612 . + . ID=gene:Rv0013;Name=trpG;biotype=protein_coding;description=Possible anthranilate synthase component II TrpG (glutamine amidotransferase);gene_id=Rv0013;logic_name=ena +Chromosome ena gene 14914 15612 . + . ID=gene:Rv0013;Name=trpG;biotype=protein_coding;description=Possible anthranilate synthase component II TrpG (glutamine amidotransferase);gene_id=Rv0013;logic_name=ena Chromosome ena mRNA 14914 15612 . + . ID=transcript:Rv0013;Parent=gene:Rv0013;Name=trpG-1;biotype=protein_coding;transcript_id=Rv0013 Chromosome ena exon 14914 15612 . + . Parent=transcript:Rv0013;Name=Rv0013-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0013-1;rank=1 Chromosome ena CDS 14914 15612 . + 0 ID=CDS:Rv0013;Parent=transcript:Rv0013;protein_id=Rv0013 ### -Chromosome ena gene 15590 17470 . - . ID=gene:Rv0014c;Name=pknB;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase B PknB (protein kinase B) (STPK B);gene_id=Rv0014c;logic_name=ena +Chromosome ena gene 15590 17470 . - . ID=gene:Rv0014c;Name=pknB;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase B PknB (protein kinase B) (STPK B);gene_id=Rv0014c;logic_name=ena Chromosome ena mRNA 15590 17470 . - . ID=transcript:Rv0014c;Parent=gene:Rv0014c;Name=pknB-1;biotype=protein_coding;transcript_id=Rv0014c Chromosome ena exon 15590 17470 . - . Parent=transcript:Rv0014c;Name=Rv0014c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0014c-1;rank=1 Chromosome ena CDS 15590 17470 . - 0 ID=CDS:Rv0014c;Parent=transcript:Rv0014c;protein_id=Rv0014c ### -Chromosome ena gene 17467 18762 . - . ID=gene:Rv0015c;Name=pknA;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase A PknA (protein kinase A) (STPK A);gene_id=Rv0015c;logic_name=ena +Chromosome ena gene 17467 18762 . - . ID=gene:Rv0015c;Name=pknA;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase A PknA (protein kinase A) (STPK A);gene_id=Rv0015c;logic_name=ena Chromosome ena mRNA 17467 18762 . - . ID=transcript:Rv0015c;Parent=gene:Rv0015c;Name=pknA-1;biotype=protein_coding;transcript_id=Rv0015c Chromosome ena exon 17467 18762 . - . Parent=transcript:Rv0015c;Name=Rv0015c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0015c-1;rank=1 Chromosome ena CDS 17467 18762 . - 0 ID=CDS:Rv0015c;Parent=transcript:Rv0015c;protein_id=Rv0015c ### -Chromosome ena gene 18759 20234 . - . ID=gene:Rv0016c;Name=pbpA;biotype=protein_coding;description=Probable penicillin-binding protein PbpA;gene_id=Rv0016c;logic_name=ena +Chromosome ena gene 18759 20234 . - . ID=gene:Rv0016c;Name=pbpA;biotype=protein_coding;description=Probable penicillin-binding protein PbpA;gene_id=Rv0016c;logic_name=ena Chromosome ena mRNA 18759 20234 . - . ID=transcript:Rv0016c;Parent=gene:Rv0016c;Name=pbpA-1;biotype=protein_coding;transcript_id=Rv0016c Chromosome ena exon 18759 20234 . - . Parent=transcript:Rv0016c;Name=Rv0016c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0016c-1;rank=1 Chromosome ena CDS 18759 20234 . - 0 ID=CDS:Rv0016c;Parent=transcript:Rv0016c;protein_id=Rv0016c ### -Chromosome ena gene 20231 21640 . - . ID=gene:Rv0017c;Name=rodA;biotype=protein_coding;description=Probable cell division protein RodA;gene_id=Rv0017c;logic_name=ena +Chromosome ena gene 20231 21640 . - . ID=gene:Rv0017c;Name=rodA;biotype=protein_coding;description=Probable cell division protein RodA;gene_id=Rv0017c;logic_name=ena Chromosome ena mRNA 20231 21640 . - . ID=transcript:Rv0017c;Parent=gene:Rv0017c;Name=rodA-1;biotype=protein_coding;transcript_id=Rv0017c Chromosome ena exon 20231 21640 . - . Parent=transcript:Rv0017c;Name=Rv0017c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0017c-1;rank=1 Chromosome ena CDS 20231 21640 . - 0 ID=CDS:Rv0017c;Parent=transcript:Rv0017c;protein_id=Rv0017c ### -Chromosome ena gene 21637 23181 . - . ID=gene:Rv0018c;Name=pstP;biotype=protein_coding;description=Phosphoserine/threonine phosphatase PstP;gene_id=Rv0018c;logic_name=ena +Chromosome ena gene 21637 23181 . - . ID=gene:Rv0018c;Name=pstP;biotype=protein_coding;description=Phosphoserine/threonine phosphatase PstP;gene_id=Rv0018c;logic_name=ena Chromosome ena mRNA 21637 23181 . - . ID=transcript:Rv0018c;Parent=gene:Rv0018c;Name=pstP-1;biotype=protein_coding;transcript_id=Rv0018c Chromosome ena exon 21637 23181 . - . Parent=transcript:Rv0018c;Name=Rv0018c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0018c-1;rank=1 Chromosome ena CDS 21637 23181 . - 0 ID=CDS:Rv0018c;Parent=transcript:Rv0018c;protein_id=Rv0018c ### -Chromosome ena gene 23270 23737 . - . ID=gene:Rv0019c;Name=fhaB;biotype=protein_coding;description=Conserved protein with FHA domain%2C FhaB;gene_id=Rv0019c;logic_name=ena +Chromosome ena gene 23270 23737 . - . ID=gene:Rv0019c;Name=fhaB;biotype=protein_coding;description=Conserved protein with FHA domain%2C FhaB;gene_id=Rv0019c;logic_name=ena Chromosome ena mRNA 23270 23737 . - . ID=transcript:Rv0019c;Parent=gene:Rv0019c;Name=fhaB-1;biotype=protein_coding;transcript_id=Rv0019c Chromosome ena exon 23270 23737 . - . Parent=transcript:Rv0019c;Name=Rv0019c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0019c-1;rank=1 Chromosome ena CDS 23270 23737 . - 0 ID=CDS:Rv0019c;Parent=transcript:Rv0019c;protein_id=Rv0019c ### -Chromosome ena gene 23861 25444 . - . ID=gene:Rv0020c;Name=fhaA;biotype=protein_coding;description=Conserved protein with FHA domain%2C FhaA;gene_id=Rv0020c;logic_name=ena +Chromosome ena gene 23861 25444 . - . ID=gene:Rv0020c;Name=fhaA;biotype=protein_coding;description=Conserved protein with FHA domain%2C FhaA;gene_id=Rv0020c;logic_name=ena Chromosome ena mRNA 23861 25444 . - . ID=transcript:Rv0020c;Parent=gene:Rv0020c;Name=fhaA-1;biotype=protein_coding;transcript_id=Rv0020c Chromosome ena exon 23861 25444 . - . Parent=transcript:Rv0020c;Name=Rv0020c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0020c-1;rank=1 Chromosome ena CDS 23861 25444 . - 0 ID=CDS:Rv0020c;Parent=transcript:Rv0020c;protein_id=Rv0020c @@ -122,1152 +122,1152 @@ Chromosome ena transcript 25644 25726 . + . ID=transcript:EBG00000313373;Parent= Chromosome ena exon 25644 25726 . + . Parent=transcript:EBG00000313373;Name=EBG00000313373;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313373;rank=1 ### Chromosome ena_gene biological_region 25644 25726 . + . external_name=AL123456.3:gene:25644..25726;logic_name=ena_gene -Chromosome ena gene 25913 26881 . - . ID=gene:Rv0021c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0021c;logic_name=ena +Chromosome ena gene 25913 26881 . - . ID=gene:Rv0021c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0021c;logic_name=ena Chromosome ena mRNA 25913 26881 . - . ID=transcript:Rv0021c;Parent=gene:Rv0021c;biotype=protein_coding;transcript_id=Rv0021c Chromosome ena exon 25913 26881 . - . Parent=transcript:Rv0021c;Name=Rv0021c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0021c-1;rank=1 Chromosome ena CDS 25913 26881 . - 0 ID=CDS:Rv0021c;Parent=transcript:Rv0021c;protein_id=Rv0021c ### -Chromosome ena gene 27023 27442 . - . ID=gene:Rv0022c;Name=whiB5;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB5;gene_id=Rv0022c;logic_name=ena +Chromosome ena gene 27023 27442 . - . ID=gene:Rv0022c;Name=whiB5;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB5;gene_id=Rv0022c;logic_name=ena Chromosome ena mRNA 27023 27442 . - . ID=transcript:Rv0022c;Parent=gene:Rv0022c;Name=whiB5-1;biotype=protein_coding;transcript_id=Rv0022c Chromosome ena exon 27023 27442 . - . Parent=transcript:Rv0022c;Name=Rv0022c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0022c-1;rank=1 Chromosome ena CDS 27023 27442 . - 0 ID=CDS:Rv0022c;Parent=transcript:Rv0022c;protein_id=Rv0022c ### -Chromosome ena gene 27595 28365 . + . ID=gene:Rv0023;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0023;logic_name=ena +Chromosome ena gene 27595 28365 . + . ID=gene:Rv0023;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0023;logic_name=ena Chromosome ena mRNA 27595 28365 . + . ID=transcript:Rv0023;Parent=gene:Rv0023;biotype=protein_coding;transcript_id=Rv0023 Chromosome ena exon 27595 28365 . + . Parent=transcript:Rv0023;Name=Rv0023-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0023-1;rank=1 Chromosome ena CDS 27595 28365 . + 0 ID=CDS:Rv0023;Parent=transcript:Rv0023;protein_id=Rv0023 ### -Chromosome ena gene 28362 29207 . + . ID=gene:Rv0024;biotype=protein_coding;description=Putative secreted protein P60-related protein;gene_id=Rv0024;logic_name=ena +Chromosome ena gene 28362 29207 . + . ID=gene:Rv0024;biotype=protein_coding;description=Putative secreted protein P60-related protein;gene_id=Rv0024;logic_name=ena Chromosome ena mRNA 28362 29207 . + . ID=transcript:Rv0024;Parent=gene:Rv0024;biotype=protein_coding;transcript_id=Rv0024 Chromosome ena exon 28362 29207 . + . Parent=transcript:Rv0024;Name=Rv0024-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0024-1;rank=1 Chromosome ena CDS 28362 29207 . + 0 ID=CDS:Rv0024;Parent=transcript:Rv0024;protein_id=Rv0024 ### -Chromosome ena gene 29245 29607 . + . ID=gene:Rv0025;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0025;logic_name=ena +Chromosome ena gene 29245 29607 . + . ID=gene:Rv0025;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0025;logic_name=ena Chromosome ena mRNA 29245 29607 . + . ID=transcript:Rv0025;Parent=gene:Rv0025;biotype=protein_coding;transcript_id=Rv0025 Chromosome ena exon 29245 29607 . + . Parent=transcript:Rv0025;Name=Rv0025-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0025-1;rank=1 Chromosome ena CDS 29245 29607 . + 0 ID=CDS:Rv0025;Parent=transcript:Rv0025;protein_id=Rv0025 ### -Chromosome ena gene 29722 31068 . + . ID=gene:Rv0026;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0026;logic_name=ena +Chromosome ena gene 29722 31068 . + . ID=gene:Rv0026;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0026;logic_name=ena Chromosome ena mRNA 29722 31068 . + . ID=transcript:Rv0026;Parent=gene:Rv0026;biotype=protein_coding;transcript_id=Rv0026 Chromosome ena exon 29722 31068 . + . Parent=transcript:Rv0026;Name=Rv0026-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0026-1;rank=1 Chromosome ena CDS 29722 31068 . + 0 ID=CDS:Rv0026;Parent=transcript:Rv0026;protein_id=Rv0026 ### -Chromosome ena gene 31189 31506 . + . ID=gene:Rv0027;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0027;logic_name=ena +Chromosome ena gene 31189 31506 . + . ID=gene:Rv0027;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0027;logic_name=ena Chromosome ena mRNA 31189 31506 . + . ID=transcript:Rv0027;Parent=gene:Rv0027;biotype=protein_coding;transcript_id=Rv0027 Chromosome ena exon 31189 31506 . + . Parent=transcript:Rv0027;Name=Rv0027-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0027-1;rank=1 Chromosome ena CDS 31189 31506 . + 0 ID=CDS:Rv0027;Parent=transcript:Rv0027;protein_id=Rv0027 ### -Chromosome ena gene 31514 31819 . + . ID=gene:Rv0028;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0028;logic_name=ena +Chromosome ena gene 31514 31819 . + . ID=gene:Rv0028;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0028;logic_name=ena Chromosome ena mRNA 31514 31819 . + . ID=transcript:Rv0028;Parent=gene:Rv0028;biotype=protein_coding;transcript_id=Rv0028 Chromosome ena exon 31514 31819 . + . Parent=transcript:Rv0028;Name=Rv0028-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0028-1;rank=1 Chromosome ena CDS 31514 31819 . + 0 ID=CDS:Rv0028;Parent=transcript:Rv0028;protein_id=Rv0028 ### -Chromosome ena gene 32057 33154 . + . ID=gene:Rv0029;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0029;logic_name=ena +Chromosome ena gene 32057 33154 . + . ID=gene:Rv0029;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0029;logic_name=ena Chromosome ena mRNA 32057 33154 . + . ID=transcript:Rv0029;Parent=gene:Rv0029;biotype=protein_coding;transcript_id=Rv0029 Chromosome ena exon 32057 33154 . + . Parent=transcript:Rv0029;Name=Rv0029-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0029-1;rank=1 Chromosome ena CDS 32057 33154 . + 0 ID=CDS:Rv0029;Parent=transcript:Rv0029;protein_id=Rv0029 ### -Chromosome ena gene 33224 33553 . + . ID=gene:Rv0030;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0030;logic_name=ena +Chromosome ena gene 33224 33553 . + . ID=gene:Rv0030;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0030;logic_name=ena Chromosome ena mRNA 33224 33553 . + . ID=transcript:Rv0030;Parent=gene:Rv0030;biotype=protein_coding;transcript_id=Rv0030 Chromosome ena exon 33224 33553 . + . Parent=transcript:Rv0030;Name=Rv0030-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0030-1;rank=1 Chromosome ena CDS 33224 33553 . + 0 ID=CDS:Rv0030;Parent=transcript:Rv0030;protein_id=Rv0030 ### -Chromosome ena gene 33582 33794 . + . ID=gene:Rv0031;biotype=protein_coding;description=Possible remnant of a transposase;gene_id=Rv0031;logic_name=ena +Chromosome ena gene 33582 33794 . + . ID=gene:Rv0031;biotype=protein_coding;description=Possible remnant of a transposase;gene_id=Rv0031;logic_name=ena Chromosome ena mRNA 33582 33794 . + . ID=transcript:Rv0031;Parent=gene:Rv0031;biotype=protein_coding;transcript_id=Rv0031 Chromosome ena exon 33582 33794 . + . Parent=transcript:Rv0031;Name=Rv0031-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0031-1;rank=1 Chromosome ena CDS 33582 33794 . + 0 ID=CDS:Rv0031;Parent=transcript:Rv0031;protein_id=Rv0031 ### -Chromosome ena gene 34295 36610 . + . ID=gene:Rv0032;Name=bioF2;biotype=protein_coding;description=Possible 8-amino-7-oxononanoate synthase BioF2 (AONS) (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase);gene_id=Rv0032;logic_name=ena +Chromosome ena gene 34295 36610 . + . ID=gene:Rv0032;Name=bioF2;biotype=protein_coding;description=Possible 8-amino-7-oxononanoate synthase BioF2 (AONS) (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase);gene_id=Rv0032;logic_name=ena Chromosome ena mRNA 34295 36610 . + . ID=transcript:Rv0032;Parent=gene:Rv0032;Name=bioF2-1;biotype=protein_coding;transcript_id=Rv0032 Chromosome ena exon 34295 36610 . + . Parent=transcript:Rv0032;Name=Rv0032-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0032-1;rank=1 Chromosome ena CDS 34295 36610 . + 0 ID=CDS:Rv0032;Parent=transcript:Rv0032;protein_id=Rv0032 ### -Chromosome ena gene 36607 36870 . + . ID=gene:Rv0033;Name=acpA;biotype=protein_coding;description=Probable acyl carrier protein AcpA (ACP);gene_id=Rv0033;logic_name=ena +Chromosome ena gene 36607 36870 . + . ID=gene:Rv0033;Name=acpA;biotype=protein_coding;description=Probable acyl carrier protein AcpA (ACP);gene_id=Rv0033;logic_name=ena Chromosome ena mRNA 36607 36870 . + . ID=transcript:Rv0033;Parent=gene:Rv0033;Name=acpA-1;biotype=protein_coding;transcript_id=Rv0033 Chromosome ena exon 36607 36870 . + . Parent=transcript:Rv0033;Name=Rv0033-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0033-1;rank=1 Chromosome ena CDS 36607 36870 . + 0 ID=CDS:Rv0033;Parent=transcript:Rv0033;protein_id=Rv0033 ### -Chromosome ena gene 36867 37262 . + . ID=gene:Rv0034;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0034;logic_name=ena +Chromosome ena gene 36867 37262 . + . ID=gene:Rv0034;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0034;logic_name=ena Chromosome ena mRNA 36867 37262 . + . ID=transcript:Rv0034;Parent=gene:Rv0034;biotype=protein_coding;transcript_id=Rv0034 Chromosome ena exon 36867 37262 . + . Parent=transcript:Rv0034;Name=Rv0034-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0034-1;rank=1 Chromosome ena CDS 36867 37262 . + 0 ID=CDS:Rv0034;Parent=transcript:Rv0034;protein_id=Rv0034 ### -Chromosome ena gene 37259 38947 . + . ID=gene:Rv0035;Name=fadD34;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD34 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0035;logic_name=ena +Chromosome ena gene 37259 38947 . + . ID=gene:Rv0035;Name=fadD34;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD34 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0035;logic_name=ena Chromosome ena mRNA 37259 38947 . + . ID=transcript:Rv0035;Parent=gene:Rv0035;Name=fadD34-1;biotype=protein_coding;transcript_id=Rv0035 Chromosome ena exon 37259 38947 . + . Parent=transcript:Rv0035;Name=Rv0035-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0035-1;rank=1 Chromosome ena CDS 37259 38947 . + 0 ID=CDS:Rv0035;Parent=transcript:Rv0035;protein_id=Rv0035 ### -Chromosome ena gene 39056 39829 . - . ID=gene:Rv0036c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0036c;logic_name=ena +Chromosome ena gene 39056 39829 . - . ID=gene:Rv0036c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0036c;logic_name=ena Chromosome ena mRNA 39056 39829 . - . ID=transcript:Rv0036c;Parent=gene:Rv0036c;biotype=protein_coding;transcript_id=Rv0036c Chromosome ena exon 39056 39829 . - . Parent=transcript:Rv0036c;Name=Rv0036c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0036c-1;rank=1 Chromosome ena CDS 39056 39829 . - 0 ID=CDS:Rv0036c;Parent=transcript:Rv0036c;protein_id=Rv0036c ### -Chromosome ena gene 39877 41202 . - . ID=gene:Rv0037c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0037c;logic_name=ena +Chromosome ena gene 39877 41202 . - . ID=gene:Rv0037c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0037c;logic_name=ena Chromosome ena mRNA 39877 41202 . - . ID=transcript:Rv0037c;Parent=gene:Rv0037c;biotype=protein_coding;transcript_id=Rv0037c Chromosome ena exon 39877 41202 . - . Parent=transcript:Rv0037c;Name=Rv0037c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0037c-1;rank=1 Chromosome ena CDS 39877 41202 . - 0 ID=CDS:Rv0037c;Parent=transcript:Rv0037c;protein_id=Rv0037c ### -Chromosome ena gene 41304 41912 . + . ID=gene:Rv0038;biotype=protein_coding;description=Conserved protein;gene_id=Rv0038;logic_name=ena +Chromosome ena gene 41304 41912 . + . ID=gene:Rv0038;biotype=protein_coding;description=Conserved protein;gene_id=Rv0038;logic_name=ena Chromosome ena mRNA 41304 41912 . + . ID=transcript:Rv0038;Parent=gene:Rv0038;biotype=protein_coding;transcript_id=Rv0038 Chromosome ena exon 41304 41912 . + . Parent=transcript:Rv0038;Name=Rv0038-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0038-1;rank=1 Chromosome ena CDS 41304 41912 . + 0 ID=CDS:Rv0038;Parent=transcript:Rv0038;protein_id=Rv0038 ### -Chromosome ena gene 42004 42351 . - . ID=gene:Rv0039c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0039c;logic_name=ena +Chromosome ena gene 42004 42351 . - . ID=gene:Rv0039c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0039c;logic_name=ena Chromosome ena mRNA 42004 42351 . - . ID=transcript:Rv0039c;Parent=gene:Rv0039c;biotype=protein_coding;transcript_id=Rv0039c Chromosome ena exon 42004 42351 . - . Parent=transcript:Rv0039c;Name=Rv0039c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0039c-1;rank=1 Chromosome ena CDS 42004 42351 . - 0 ID=CDS:Rv0039c;Parent=transcript:Rv0039c;protein_id=Rv0039c ### -Chromosome ena gene 42433 43365 . - . ID=gene:Rv0040c;Name=mtc28;biotype=protein_coding;description=Secreted proline rich protein Mtc28 (proline rich 28 kDa antigen);gene_id=Rv0040c;logic_name=ena +Chromosome ena gene 42433 43365 . - . ID=gene:Rv0040c;Name=mtc28;biotype=protein_coding;description=Secreted proline rich protein Mtc28 (proline rich 28 kDa antigen);gene_id=Rv0040c;logic_name=ena Chromosome ena mRNA 42433 43365 . - . ID=transcript:Rv0040c;Parent=gene:Rv0040c;Name=mtc28-1;biotype=protein_coding;transcript_id=Rv0040c Chromosome ena exon 42433 43365 . - . Parent=transcript:Rv0040c;Name=Rv0040c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0040c-1;rank=1 Chromosome ena CDS 42433 43365 . - 0 ID=CDS:Rv0040c;Parent=transcript:Rv0040c;protein_id=Rv0040c ### -Chromosome ena gene 43562 46471 . + . ID=gene:Rv0041;Name=leuS;biotype=protein_coding;description=Probable leucyl-tRNA synthetase LeuS (leucine--tRNA ligase) (LEURS);gene_id=Rv0041;logic_name=ena +Chromosome ena gene 43562 46471 . + . ID=gene:Rv0041;Name=leuS;biotype=protein_coding;description=Probable leucyl-tRNA synthetase LeuS (leucine--tRNA ligase) (LEURS);gene_id=Rv0041;logic_name=ena Chromosome ena mRNA 43562 46471 . + . ID=transcript:Rv0041;Parent=gene:Rv0041;Name=leuS-1;biotype=protein_coding;transcript_id=Rv0041 Chromosome ena exon 43562 46471 . + . Parent=transcript:Rv0041;Name=Rv0041-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0041-1;rank=1 Chromosome ena CDS 43562 46471 . + 0 ID=CDS:Rv0041;Parent=transcript:Rv0041;protein_id=Rv0041 ### -Chromosome ena gene 46581 47207 . - . ID=gene:Rv0042c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably MarR-family);gene_id=Rv0042c;logic_name=ena +Chromosome ena gene 46581 47207 . - . ID=gene:Rv0042c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably MarR-family);gene_id=Rv0042c;logic_name=ena Chromosome ena mRNA 46581 47207 . - . ID=transcript:Rv0042c;Parent=gene:Rv0042c;biotype=protein_coding;transcript_id=Rv0042c Chromosome ena exon 46581 47207 . - . Parent=transcript:Rv0042c;Name=Rv0042c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0042c-1;rank=1 Chromosome ena CDS 46581 47207 . - 0 ID=CDS:Rv0042c;Parent=transcript:Rv0042c;protein_id=Rv0042c ### -Chromosome ena gene 47366 48100 . - . ID=gene:Rv0043c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0043c;logic_name=ena +Chromosome ena gene 47366 48100 . - . ID=gene:Rv0043c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0043c;logic_name=ena Chromosome ena mRNA 47366 48100 . - . ID=transcript:Rv0043c;Parent=gene:Rv0043c;biotype=protein_coding;transcript_id=Rv0043c Chromosome ena exon 47366 48100 . - . Parent=transcript:Rv0043c;Name=Rv0043c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0043c-1;rank=1 Chromosome ena CDS 47366 48100 . - 0 ID=CDS:Rv0043c;Parent=transcript:Rv0043c;protein_id=Rv0043c ### -Chromosome ena gene 48233 49027 . - . ID=gene:Rv0044c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0044c;logic_name=ena +Chromosome ena gene 48233 49027 . - . ID=gene:Rv0044c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0044c;logic_name=ena Chromosome ena mRNA 48233 49027 . - . ID=transcript:Rv0044c;Parent=gene:Rv0044c;biotype=protein_coding;transcript_id=Rv0044c Chromosome ena exon 48233 49027 . - . Parent=transcript:Rv0044c;Name=Rv0044c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0044c-1;rank=1 Chromosome ena CDS 48233 49027 . - 0 ID=CDS:Rv0044c;Parent=transcript:Rv0044c;protein_id=Rv0044c ### -Chromosome ena gene 49043 49939 . - . ID=gene:Rv0045c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv0045c;logic_name=ena +Chromosome ena gene 49043 49939 . - . ID=gene:Rv0045c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv0045c;logic_name=ena Chromosome ena mRNA 49043 49939 . - . ID=transcript:Rv0045c;Parent=gene:Rv0045c;biotype=protein_coding;transcript_id=Rv0045c Chromosome ena exon 49043 49939 . - . Parent=transcript:Rv0045c;Name=Rv0045c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0045c-1;rank=1 Chromosome ena CDS 49043 49939 . - 0 ID=CDS:Rv0045c;Parent=transcript:Rv0045c;protein_id=Rv0045c ### -Chromosome ena gene 50021 51124 . - . ID=gene:Rv0046c;Name=ino1;biotype=protein_coding;description=myo-inositol-1-phosphate synthase Ino1 (inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (glucose 6-phosphate cyclase) (glucocycloaldolase);gene_id=Rv0046c;logic_name=ena +Chromosome ena gene 50021 51124 . - . ID=gene:Rv0046c;Name=ino1;biotype=protein_coding;description=myo-inositol-1-phosphate synthase Ino1 (inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (glucose 6-phosphate cyclase) (glucocycloaldolase);gene_id=Rv0046c;logic_name=ena Chromosome ena mRNA 50021 51124 . - . ID=transcript:Rv0046c;Parent=gene:Rv0046c;Name=ino1-1;biotype=protein_coding;transcript_id=Rv0046c Chromosome ena exon 50021 51124 . - . Parent=transcript:Rv0046c;Name=Rv0046c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0046c-1;rank=1 Chromosome ena CDS 50021 51124 . - 0 ID=CDS:Rv0046c;Parent=transcript:Rv0046c;protein_id=Rv0046c ### -Chromosome ena gene 51185 51727 . - . ID=gene:Rv0047c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0047c;logic_name=ena +Chromosome ena gene 51185 51727 . - . ID=gene:Rv0047c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0047c;logic_name=ena Chromosome ena mRNA 51185 51727 . - . ID=transcript:Rv0047c;Parent=gene:Rv0047c;biotype=protein_coding;transcript_id=Rv0047c Chromosome ena exon 51185 51727 . - . Parent=transcript:Rv0047c;Name=Rv0047c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0047c-1;rank=1 Chromosome ena CDS 51185 51727 . - 0 ID=CDS:Rv0047c;Parent=transcript:Rv0047c;protein_id=Rv0047c ### -Chromosome ena gene 51828 52697 . - . ID=gene:Rv0048c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0048c;logic_name=ena +Chromosome ena gene 51828 52697 . - . ID=gene:Rv0048c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0048c;logic_name=ena Chromosome ena mRNA 51828 52697 . - . ID=transcript:Rv0048c;Parent=gene:Rv0048c;biotype=protein_coding;transcript_id=Rv0048c Chromosome ena exon 51828 52697 . - . Parent=transcript:Rv0048c;Name=Rv0048c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0048c-1;rank=1 Chromosome ena CDS 51828 52697 . - 0 ID=CDS:Rv0048c;Parent=transcript:Rv0048c;protein_id=Rv0048c ### -Chromosome ena gene 52831 53244 . + . ID=gene:Rv0049;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0049;logic_name=ena +Chromosome ena gene 52831 53244 . + . ID=gene:Rv0049;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0049;logic_name=ena Chromosome ena mRNA 52831 53244 . + . ID=transcript:Rv0049;Parent=gene:Rv0049;biotype=protein_coding;transcript_id=Rv0049 Chromosome ena exon 52831 53244 . + . Parent=transcript:Rv0049;Name=Rv0049-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0049-1;rank=1 Chromosome ena CDS 52831 53244 . + 0 ID=CDS:Rv0049;Parent=transcript:Rv0049;protein_id=Rv0049 ### -Chromosome ena gene 53663 55699 . + . ID=gene:Rv0050;Name=ponA1;biotype=protein_coding;description=Probable bifunctional penicillin-binding protein 1A/1B PonA1 (murein polymerase) (PBP1): penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase);gene_id=Rv0050;logic_name=ena +Chromosome ena gene 53663 55699 . + . ID=gene:Rv0050;Name=ponA1;biotype=protein_coding;description=Probable bifunctional penicillin-binding protein 1A/1B PonA1 (murein polymerase) (PBP1): penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase);gene_id=Rv0050;logic_name=ena Chromosome ena mRNA 53663 55699 . + . ID=transcript:Rv0050;Parent=gene:Rv0050;Name=ponA1-1;biotype=protein_coding;transcript_id=Rv0050 Chromosome ena exon 53663 55699 . + . Parent=transcript:Rv0050;Name=Rv0050-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0050-1;rank=1 Chromosome ena CDS 53663 55699 . + 0 ID=CDS:Rv0050;Parent=transcript:Rv0050;protein_id=Rv0050 ### -Chromosome ena gene 55696 57378 . + . ID=gene:Rv0051;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0051;logic_name=ena +Chromosome ena gene 55696 57378 . + . ID=gene:Rv0051;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0051;logic_name=ena Chromosome ena mRNA 55696 57378 . + . ID=transcript:Rv0051;Parent=gene:Rv0051;biotype=protein_coding;transcript_id=Rv0051 Chromosome ena exon 55696 57378 . + . Parent=transcript:Rv0051;Name=Rv0051-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0051-1;rank=1 Chromosome ena CDS 55696 57378 . + 0 ID=CDS:Rv0051;Parent=transcript:Rv0051;protein_id=Rv0051 ### -Chromosome ena gene 57410 57973 . + . ID=gene:Rv0052;biotype=protein_coding;description=Conserved protein;gene_id=Rv0052;logic_name=ena +Chromosome ena gene 57410 57973 . + . ID=gene:Rv0052;biotype=protein_coding;description=Conserved protein;gene_id=Rv0052;logic_name=ena Chromosome ena mRNA 57410 57973 . + . ID=transcript:Rv0052;Parent=gene:Rv0052;biotype=protein_coding;transcript_id=Rv0052 Chromosome ena exon 57410 57973 . + . Parent=transcript:Rv0052;Name=Rv0052-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0052-1;rank=1 Chromosome ena CDS 57410 57973 . + 0 ID=CDS:Rv0052;Parent=transcript:Rv0052;protein_id=Rv0052 ### -Chromosome ena gene 58192 58482 . + . ID=gene:Rv0053;Name=rpsF;biotype=protein_coding;description=30S ribosomal protein S6 RpsF;gene_id=Rv0053;logic_name=ena +Chromosome ena gene 58192 58482 . + . ID=gene:Rv0053;Name=rpsF;biotype=protein_coding;description=30S ribosomal protein S6 RpsF;gene_id=Rv0053;logic_name=ena Chromosome ena mRNA 58192 58482 . + . ID=transcript:Rv0053;Parent=gene:Rv0053;Name=rpsF-1;biotype=protein_coding;transcript_id=Rv0053 Chromosome ena exon 58192 58482 . + . Parent=transcript:Rv0053;Name=Rv0053-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0053-1;rank=1 Chromosome ena CDS 58192 58482 . + 0 ID=CDS:Rv0053;Parent=transcript:Rv0053;protein_id=Rv0053 ### -Chromosome ena gene 58586 59080 . + . ID=gene:Rv0054;Name=ssb;biotype=protein_coding;description=Single-strand binding protein Ssb (helix-destabilizing protein);gene_id=Rv0054;logic_name=ena +Chromosome ena gene 58586 59080 . + . ID=gene:Rv0054;Name=ssb;biotype=protein_coding;description=Single-strand binding protein Ssb (helix-destabilizing protein);gene_id=Rv0054;logic_name=ena Chromosome ena mRNA 58586 59080 . + . ID=transcript:Rv0054;Parent=gene:Rv0054;Name=ssb-1;biotype=protein_coding;transcript_id=Rv0054 Chromosome ena exon 58586 59080 . + . Parent=transcript:Rv0054;Name=Rv0054-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0054-1;rank=1 Chromosome ena CDS 58586 59080 . + 0 ID=CDS:Rv0054;Parent=transcript:Rv0054;protein_id=Rv0054 ### -Chromosome ena gene 59122 59376 . + . ID=gene:Rv0055;Name=rpsR1;biotype=protein_coding;description=30S ribosomal protein S18-1 RpsR1;gene_id=Rv0055;logic_name=ena +Chromosome ena gene 59122 59376 . + . ID=gene:Rv0055;Name=rpsR1;biotype=protein_coding;description=30S ribosomal protein S18-1 RpsR1;gene_id=Rv0055;logic_name=ena Chromosome ena mRNA 59122 59376 . + . ID=transcript:Rv0055;Parent=gene:Rv0055;Name=rpsR1-1;biotype=protein_coding;transcript_id=Rv0055 Chromosome ena exon 59122 59376 . + . Parent=transcript:Rv0055;Name=Rv0055-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0055-1;rank=1 Chromosome ena CDS 59122 59376 . + 0 ID=CDS:Rv0055;Parent=transcript:Rv0055;protein_id=Rv0055 ### -Chromosome ena gene 59409 59867 . + . ID=gene:Rv0056;Name=rplI;biotype=protein_coding;description=50S ribosomal protein L9 RplI;gene_id=Rv0056;logic_name=ena +Chromosome ena gene 59409 59867 . + . ID=gene:Rv0056;Name=rplI;biotype=protein_coding;description=50S ribosomal protein L9 RplI;gene_id=Rv0056;logic_name=ena Chromosome ena mRNA 59409 59867 . + . ID=transcript:Rv0056;Parent=gene:Rv0056;Name=rplI-1;biotype=protein_coding;transcript_id=Rv0056 Chromosome ena exon 59409 59867 . + . Parent=transcript:Rv0056;Name=Rv0056-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0056-1;rank=1 Chromosome ena CDS 59409 59867 . + 0 ID=CDS:Rv0056;Parent=transcript:Rv0056;protein_id=Rv0056 ### -Chromosome ena gene 59896 60417 . + . ID=gene:Rv0057;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0057;logic_name=ena +Chromosome ena gene 59896 60417 . + . ID=gene:Rv0057;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0057;logic_name=ena Chromosome ena mRNA 59896 60417 . + . ID=transcript:Rv0057;Parent=gene:Rv0057;biotype=protein_coding;transcript_id=Rv0057 Chromosome ena exon 59896 60417 . + . Parent=transcript:Rv0057;Name=Rv0057-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0057-1;rank=1 Chromosome ena CDS 59896 60417 . + 0 ID=CDS:Rv0057;Parent=transcript:Rv0057;protein_id=Rv0057 ### -Chromosome ena gene 60396 63020 . + . ID=gene:Rv0058;Name=dnaB;biotype=protein_coding;description=Probable replicative DNA helicase DnaB;gene_id=Rv0058;logic_name=ena +Chromosome ena gene 60396 63020 . + . ID=gene:Rv0058;Name=dnaB;biotype=protein_coding;description=Probable replicative DNA helicase DnaB;gene_id=Rv0058;logic_name=ena Chromosome ena mRNA 60396 63020 . + . ID=transcript:Rv0058;Parent=gene:Rv0058;Name=dnaB-1;biotype=protein_coding;transcript_id=Rv0058 Chromosome ena exon 60396 63020 . + . Parent=transcript:Rv0058;Name=Rv0058-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0058-1;rank=1 Chromosome ena CDS 60396 63020 . + 0 ID=CDS:Rv0058;Parent=transcript:Rv0058;protein_id=Rv0058 ### -Chromosome ena gene 63200 63892 . + . ID=gene:Rv0059;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0059;logic_name=ena +Chromosome ena gene 63200 63892 . + . ID=gene:Rv0059;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0059;logic_name=ena Chromosome ena mRNA 63200 63892 . + . ID=transcript:Rv0059;Parent=gene:Rv0059;biotype=protein_coding;transcript_id=Rv0059 Chromosome ena exon 63200 63892 . + . Parent=transcript:Rv0059;Name=Rv0059-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0059-1;rank=1 Chromosome ena CDS 63200 63892 . + 0 ID=CDS:Rv0059;Parent=transcript:Rv0059;protein_id=Rv0059 ### -Chromosome ena gene 63909 64967 . + . ID=gene:Rv0060;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0060;logic_name=ena +Chromosome ena gene 63909 64967 . + . ID=gene:Rv0060;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0060;logic_name=ena Chromosome ena mRNA 63909 64967 . + . ID=transcript:Rv0060;Parent=gene:Rv0060;biotype=protein_coding;transcript_id=Rv0060 Chromosome ena exon 63909 64967 . + . Parent=transcript:Rv0060;Name=Rv0060-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0060-1;rank=1 Chromosome ena CDS 63909 64967 . + 0 ID=CDS:Rv0060;Parent=transcript:Rv0060;protein_id=Rv0060 ### -Chromosome ena gene 65012 65350 . - . ID=gene:Rv0061c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0061c;logic_name=ena +Chromosome ena gene 65012 65350 . - . ID=gene:Rv0061c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0061c;logic_name=ena Chromosome ena mRNA 65012 65350 . - . ID=transcript:Rv0061c;Parent=gene:Rv0061c;biotype=protein_coding;transcript_id=Rv0061c Chromosome ena exon 65012 65350 . - . Parent=transcript:Rv0061c;Name=Rv0061c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0061c-1;rank=1 Chromosome ena CDS 65012 65350 . - 0 ID=CDS:Rv0061c;Parent=transcript:Rv0061c;protein_id=Rv0061c ### -Chromosome ena gene 65552 66694 . + . ID=gene:Rv0062;Name=celA1;biotype=protein_coding;description=Possible cellulase CelA1 (endoglucanase) (endo-1%2C4-beta-glucanase) (FI-cmcase) (carboxymethyl cellulase);gene_id=Rv0062;logic_name=ena +Chromosome ena gene 65552 66694 . + . ID=gene:Rv0062;Name=celA1;biotype=protein_coding;description=Possible cellulase CelA1 (endoglucanase) (endo-1%2C4-beta-glucanase) (FI-cmcase) (carboxymethyl cellulase);gene_id=Rv0062;logic_name=ena Chromosome ena mRNA 65552 66694 . + . ID=transcript:Rv0062;Parent=gene:Rv0062;Name=celA1-1;biotype=protein_coding;transcript_id=Rv0062 Chromosome ena exon 65552 66694 . + . Parent=transcript:Rv0062;Name=Rv0062-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0062-1;rank=1 Chromosome ena CDS 65552 66694 . + 0 ID=CDS:Rv0062;Parent=transcript:Rv0062;protein_id=Rv0062 ### -Chromosome ena gene 66923 68362 . + . ID=gene:Rv0063;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0063;logic_name=ena +Chromosome ena gene 66923 68362 . + . ID=gene:Rv0063;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0063;logic_name=ena Chromosome ena mRNA 66923 68362 . + . ID=transcript:Rv0063;Parent=gene:Rv0063;biotype=protein_coding;transcript_id=Rv0063 Chromosome ena exon 66923 68362 . + . Parent=transcript:Rv0063;Name=Rv0063-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0063-1;rank=1 Chromosome ena CDS 66923 68362 . + 0 ID=CDS:Rv0063;Parent=transcript:Rv0063;protein_id=Rv0063 ### -Chromosome ena gene 68620 71559 . + . ID=gene:Rv0064;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0064;logic_name=ena +Chromosome ena gene 68620 71559 . + . ID=gene:Rv0064;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0064;logic_name=ena Chromosome ena mRNA 68620 71559 . + . ID=transcript:Rv0064;Parent=gene:Rv0064;biotype=protein_coding;transcript_id=Rv0064 Chromosome ena exon 68620 71559 . + . Parent=transcript:Rv0064;Name=Rv0064-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0064-1;rank=1 Chromosome ena CDS 68620 71559 . + 0 ID=CDS:Rv0064;Parent=transcript:Rv0064;protein_id=Rv0064 ### -Chromosome ena gene 71589 71828 . + . ID=gene:Rv0064A;Name=vapB1;biotype=protein_coding;description=Possible antitoxin VapB1;gene_id=Rv0064A;logic_name=ena +Chromosome ena gene 71589 71828 . + . ID=gene:Rv0064A;Name=vapB1;biotype=protein_coding;description=Possible antitoxin VapB1;gene_id=Rv0064A;logic_name=ena Chromosome ena mRNA 71589 71828 . + . ID=transcript:Rv0064A;Parent=gene:Rv0064A;Name=vapB1-1;biotype=protein_coding;transcript_id=Rv0064A Chromosome ena exon 71589 71828 . + . Parent=transcript:Rv0064A;Name=Rv0064A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0064A-1;rank=1 Chromosome ena CDS 71589 71828 . + 0 ID=CDS:Rv0064A;Parent=transcript:Rv0064A;protein_id=Rv0064A ### -Chromosome ena gene 71821 72222 . + . ID=gene:Rv0065;Name=vapC1;biotype=protein_coding;description=Possible toxin VapC1;gene_id=Rv0065;logic_name=ena +Chromosome ena gene 71821 72222 . + . ID=gene:Rv0065;Name=vapC1;biotype=protein_coding;description=Possible toxin VapC1;gene_id=Rv0065;logic_name=ena Chromosome ena mRNA 71821 72222 . + . ID=transcript:Rv0065;Parent=gene:Rv0065;Name=vapC1-1;biotype=protein_coding;transcript_id=Rv0065 Chromosome ena exon 71821 72222 . + . Parent=transcript:Rv0065;Name=Rv0065-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0065-1;rank=1 Chromosome ena CDS 71821 72222 . + 0 ID=CDS:Rv0065;Parent=transcript:Rv0065;protein_id=Rv0065 ### -Chromosome ena gene 72274 74511 . - . ID=gene:Rv0066c;Name=icd2;biotype=protein_coding;description=Probable isocitrate dehydrogenase [NADP] Icd2 (oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP);gene_id=Rv0066c;logic_name=ena +Chromosome ena gene 72274 74511 . - . ID=gene:Rv0066c;Name=icd2;biotype=protein_coding;description=Probable isocitrate dehydrogenase [NADP] Icd2 (oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP);gene_id=Rv0066c;logic_name=ena Chromosome ena mRNA 72274 74511 . - . ID=transcript:Rv0066c;Parent=gene:Rv0066c;Name=icd2-1;biotype=protein_coding;transcript_id=Rv0066c Chromosome ena exon 72274 74511 . - . Parent=transcript:Rv0066c;Name=Rv0066c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0066c-1;rank=1 Chromosome ena CDS 72274 74511 . - 0 ID=CDS:Rv0066c;Parent=transcript:Rv0066c;protein_id=Rv0066c ### -Chromosome ena gene 74629 75198 . - . ID=gene:Rv0067c;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0067c;logic_name=ena +Chromosome ena gene 74629 75198 . - . ID=gene:Rv0067c;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0067c;logic_name=ena Chromosome ena mRNA 74629 75198 . - . ID=transcript:Rv0067c;Parent=gene:Rv0067c;biotype=protein_coding;transcript_id=Rv0067c Chromosome ena exon 74629 75198 . - . Parent=transcript:Rv0067c;Name=Rv0067c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0067c-1;rank=1 Chromosome ena CDS 74629 75198 . - 0 ID=CDS:Rv0067c;Parent=transcript:Rv0067c;protein_id=Rv0067c ### -Chromosome ena gene 75301 76212 . + . ID=gene:Rv0068;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0068;logic_name=ena +Chromosome ena gene 75301 76212 . + . ID=gene:Rv0068;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0068;logic_name=ena Chromosome ena mRNA 75301 76212 . + . ID=transcript:Rv0068;Parent=gene:Rv0068;biotype=protein_coding;transcript_id=Rv0068 Chromosome ena exon 75301 76212 . + . Parent=transcript:Rv0068;Name=Rv0068-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0068-1;rank=1 Chromosome ena CDS 75301 76212 . + 0 ID=CDS:Rv0068;Parent=transcript:Rv0068;protein_id=Rv0068 ### -Chromosome ena gene 76237 77622 . - . ID=gene:Rv0069c;Name=sdaA;biotype=protein_coding;description=Probable L-serine dehydratase SdaA (L-serine deaminase) (SDH) (L-SD);gene_id=Rv0069c;logic_name=ena +Chromosome ena gene 76237 77622 . - . ID=gene:Rv0069c;Name=sdaA;biotype=protein_coding;description=Probable L-serine dehydratase SdaA (L-serine deaminase) (SDH) (L-SD);gene_id=Rv0069c;logic_name=ena Chromosome ena mRNA 76237 77622 . - . ID=transcript:Rv0069c;Parent=gene:Rv0069c;Name=sdaA-1;biotype=protein_coding;transcript_id=Rv0069c Chromosome ena exon 76237 77622 . - . Parent=transcript:Rv0069c;Name=Rv0069c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0069c-1;rank=1 Chromosome ena CDS 76237 77622 . - 0 ID=CDS:Rv0069c;Parent=transcript:Rv0069c;protein_id=Rv0069c ### -Chromosome ena gene 77619 78896 . - . ID=gene:Rv0070c;Name=glyA2;biotype=protein_coding;description=Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2);gene_id=Rv0070c;logic_name=ena +Chromosome ena gene 77619 78896 . - . ID=gene:Rv0070c;Name=glyA2;biotype=protein_coding;description=Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2);gene_id=Rv0070c;logic_name=ena Chromosome ena mRNA 77619 78896 . - . ID=transcript:Rv0070c;Parent=gene:Rv0070c;Name=glyA2-1;biotype=protein_coding;transcript_id=Rv0070c Chromosome ena exon 77619 78896 . - . Parent=transcript:Rv0070c;Name=Rv0070c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0070c-1;rank=1 Chromosome ena CDS 77619 78896 . - 0 ID=CDS:Rv0070c;Parent=transcript:Rv0070c;protein_id=Rv0070c ### -Chromosome ena gene 79486 80193 . + . ID=gene:Rv0071;biotype=protein_coding;description=Possible maturase;gene_id=Rv0071;logic_name=ena +Chromosome ena gene 79486 80193 . + . ID=gene:Rv0071;biotype=protein_coding;description=Possible maturase;gene_id=Rv0071;logic_name=ena Chromosome ena mRNA 79486 80193 . + . ID=transcript:Rv0071;Parent=gene:Rv0071;biotype=protein_coding;transcript_id=Rv0071 Chromosome ena exon 79486 80193 . + . Parent=transcript:Rv0071;Name=Rv0071-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0071-1;rank=1 Chromosome ena CDS 79486 80193 . + 0 ID=CDS:Rv0071;Parent=transcript:Rv0071;protein_id=Rv0071 ### -Chromosome ena gene 80624 81673 . + . ID=gene:Rv0072;biotype=protein_coding;description=Probable glutamine-transport transmembrane protein ABC transporter;gene_id=Rv0072;logic_name=ena +Chromosome ena gene 80624 81673 . + . ID=gene:Rv0072;biotype=protein_coding;description=Probable glutamine-transport transmembrane protein ABC transporter;gene_id=Rv0072;logic_name=ena Chromosome ena mRNA 80624 81673 . + . ID=transcript:Rv0072;Parent=gene:Rv0072;biotype=protein_coding;transcript_id=Rv0072 Chromosome ena exon 80624 81673 . + . Parent=transcript:Rv0072;Name=Rv0072-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0072-1;rank=1 Chromosome ena CDS 80624 81673 . + 0 ID=CDS:Rv0072;Parent=transcript:Rv0072;protein_id=Rv0072 ### -Chromosome ena gene 81676 82668 . + . ID=gene:Rv0073;biotype=protein_coding;description=Probable glutamine-transport ATP-binding protein ABC transporter;gene_id=Rv0073;logic_name=ena +Chromosome ena gene 81676 82668 . + . ID=gene:Rv0073;biotype=protein_coding;description=Probable glutamine-transport ATP-binding protein ABC transporter;gene_id=Rv0073;logic_name=ena Chromosome ena mRNA 81676 82668 . + . ID=transcript:Rv0073;Parent=gene:Rv0073;biotype=protein_coding;transcript_id=Rv0073 Chromosome ena exon 81676 82668 . + . Parent=transcript:Rv0073;Name=Rv0073-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0073-1;rank=1 Chromosome ena CDS 81676 82668 . + 0 ID=CDS:Rv0073;Parent=transcript:Rv0073;protein_id=Rv0073 ### -Chromosome ena gene 82748 83983 . + . ID=gene:Rv0074;biotype=protein_coding;description=Conserved protein;gene_id=Rv0074;logic_name=ena +Chromosome ena gene 82748 83983 . + . ID=gene:Rv0074;biotype=protein_coding;description=Conserved protein;gene_id=Rv0074;logic_name=ena Chromosome ena mRNA 82748 83983 . + . ID=transcript:Rv0074;Parent=gene:Rv0074;biotype=protein_coding;transcript_id=Rv0074 Chromosome ena exon 82748 83983 . + . Parent=transcript:Rv0074;Name=Rv0074-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0074-1;rank=1 Chromosome ena CDS 82748 83983 . + 0 ID=CDS:Rv0074;Parent=transcript:Rv0074;protein_id=Rv0074 ### -Chromosome ena gene 83996 85168 . + . ID=gene:Rv0075;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv0075;logic_name=ena +Chromosome ena gene 83996 85168 . + . ID=gene:Rv0075;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv0075;logic_name=ena Chromosome ena mRNA 83996 85168 . + . ID=transcript:Rv0075;Parent=gene:Rv0075;biotype=protein_coding;transcript_id=Rv0075 Chromosome ena exon 83996 85168 . + . Parent=transcript:Rv0075;Name=Rv0075-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0075-1;rank=1 Chromosome ena CDS 83996 85168 . + 0 ID=CDS:Rv0075;Parent=transcript:Rv0075;protein_id=Rv0075 ### -Chromosome ena gene 85183 85572 . - . ID=gene:Rv0076c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv0076c;logic_name=ena +Chromosome ena gene 85183 85572 . - . ID=gene:Rv0076c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv0076c;logic_name=ena Chromosome ena mRNA 85183 85572 . - . ID=transcript:Rv0076c;Parent=gene:Rv0076c;biotype=protein_coding;transcript_id=Rv0076c Chromosome ena exon 85183 85572 . - . Parent=transcript:Rv0076c;Name=Rv0076c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0076c-1;rank=1 Chromosome ena CDS 85183 85572 . - 0 ID=CDS:Rv0076c;Parent=transcript:Rv0076c;protein_id=Rv0076c ### -Chromosome ena gene 85636 86466 . - . ID=gene:Rv0077c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0077c;logic_name=ena +Chromosome ena gene 85636 86466 . - . ID=gene:Rv0077c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0077c;logic_name=ena Chromosome ena mRNA 85636 86466 . - . ID=transcript:Rv0077c;Parent=gene:Rv0077c;biotype=protein_coding;transcript_id=Rv0077c Chromosome ena exon 85636 86466 . - . Parent=transcript:Rv0077c;Name=Rv0077c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0077c-1;rank=1 Chromosome ena CDS 85636 86466 . - 0 ID=CDS:Rv0077c;Parent=transcript:Rv0077c;protein_id=Rv0077c ### -Chromosome ena gene 86528 87133 . + . ID=gene:Rv0078;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0078;logic_name=ena +Chromosome ena gene 86528 87133 . + . ID=gene:Rv0078;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0078;logic_name=ena Chromosome ena mRNA 86528 87133 . + . ID=transcript:Rv0078;Parent=gene:Rv0078;biotype=protein_coding;transcript_id=Rv0078 Chromosome ena exon 86528 87133 . + . Parent=transcript:Rv0078;Name=Rv0078-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0078-1;rank=1 Chromosome ena CDS 86528 87133 . + 0 ID=CDS:Rv0078;Parent=transcript:Rv0078;protein_id=Rv0078 ### -Chromosome ena gene 87208 87801 . - . ID=gene:Rv0078A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0078A;logic_name=ena +Chromosome ena gene 87208 87801 . - . ID=gene:Rv0078A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0078A;logic_name=ena Chromosome ena mRNA 87208 87801 . - . ID=transcript:Rv0078A;Parent=gene:Rv0078A;biotype=protein_coding;transcript_id=Rv0078A Chromosome ena exon 87208 87801 . - . Parent=transcript:Rv0078A;Name=Rv0078A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0078A-1;rank=1 Chromosome ena CDS 87208 87801 . - 0 ID=CDS:Rv0078A;Parent=transcript:Rv0078A;protein_id=Rv0078A ### -Chromosome ena gene 87798 88004 . - . ID=gene:Rv0078B;biotype=protein_coding;description=Conserved protein;gene_id=Rv0078B;logic_name=ena +Chromosome ena gene 87798 88004 . - . ID=gene:Rv0078B;biotype=protein_coding;description=Conserved protein;gene_id=Rv0078B;logic_name=ena Chromosome ena mRNA 87798 88004 . - . ID=transcript:Rv0078B;Parent=gene:Rv0078B;biotype=protein_coding;transcript_id=Rv0078B Chromosome ena exon 87798 88004 . - . Parent=transcript:Rv0078B;Name=Rv0078B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0078B-1;rank=1 Chromosome ena CDS 87798 88004 . - 0 ID=CDS:Rv0078B;Parent=transcript:Rv0078B;protein_id=Rv0078B ### -Chromosome ena gene 88204 89025 . + . ID=gene:Rv0079;biotype=protein_coding;description=Unknown protein;gene_id=Rv0079;logic_name=ena +Chromosome ena gene 88204 89025 . + . ID=gene:Rv0079;biotype=protein_coding;description=Unknown protein;gene_id=Rv0079;logic_name=ena Chromosome ena mRNA 88204 89025 . + . ID=transcript:Rv0079;Parent=gene:Rv0079;biotype=protein_coding;transcript_id=Rv0079 Chromosome ena exon 88204 89025 . + . Parent=transcript:Rv0079;Name=Rv0079-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0079-1;rank=1 Chromosome ena CDS 88204 89025 . + 0 ID=CDS:Rv0079;Parent=transcript:Rv0079;protein_id=Rv0079 ### -Chromosome ena gene 89022 89480 . + . ID=gene:Rv0080;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0080;logic_name=ena +Chromosome ena gene 89022 89480 . + . ID=gene:Rv0080;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0080;logic_name=ena Chromosome ena mRNA 89022 89480 . + . ID=transcript:Rv0080;Parent=gene:Rv0080;biotype=protein_coding;transcript_id=Rv0080 Chromosome ena exon 89022 89480 . + . Parent=transcript:Rv0080;Name=Rv0080-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0080-1;rank=1 Chromosome ena CDS 89022 89480 . + 0 ID=CDS:Rv0080;Parent=transcript:Rv0080;protein_id=Rv0080 ### -Chromosome ena gene 89575 89919 . + . ID=gene:Rv0081;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0081;logic_name=ena +Chromosome ena gene 89575 89919 . + . ID=gene:Rv0081;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0081;logic_name=ena Chromosome ena mRNA 89575 89919 . + . ID=transcript:Rv0081;Parent=gene:Rv0081;biotype=protein_coding;transcript_id=Rv0081 Chromosome ena exon 89575 89919 . + . Parent=transcript:Rv0081;Name=Rv0081-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0081-1;rank=1 Chromosome ena CDS 89575 89919 . + 0 ID=CDS:Rv0081;Parent=transcript:Rv0081;protein_id=Rv0081 ### -Chromosome ena gene 89924 90403 . + . ID=gene:Rv0082;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0082;logic_name=ena +Chromosome ena gene 89924 90403 . + . ID=gene:Rv0082;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0082;logic_name=ena Chromosome ena mRNA 89924 90403 . + . ID=transcript:Rv0082;Parent=gene:Rv0082;biotype=protein_coding;transcript_id=Rv0082 Chromosome ena exon 89924 90403 . + . Parent=transcript:Rv0082;Name=Rv0082-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0082-1;rank=1 Chromosome ena CDS 89924 90403 . + 0 ID=CDS:Rv0082;Parent=transcript:Rv0082;protein_id=Rv0082 ### -Chromosome ena gene 90400 92322 . + . ID=gene:Rv0083;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0083;logic_name=ena +Chromosome ena gene 90400 92322 . + . ID=gene:Rv0083;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0083;logic_name=ena Chromosome ena mRNA 90400 92322 . + . ID=transcript:Rv0083;Parent=gene:Rv0083;biotype=protein_coding;transcript_id=Rv0083 Chromosome ena exon 90400 92322 . + . Parent=transcript:Rv0083;Name=Rv0083-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0083-1;rank=1 Chromosome ena CDS 90400 92322 . + 0 ID=CDS:Rv0083;Parent=transcript:Rv0083;protein_id=Rv0083 ### -Chromosome ena gene 92328 93278 . + . ID=gene:Rv0084;Name=hycD;biotype=protein_coding;description=Possible formate hydrogenlyase HycD (FHL);gene_id=Rv0084;logic_name=ena +Chromosome ena gene 92328 93278 . + . ID=gene:Rv0084;Name=hycD;biotype=protein_coding;description=Possible formate hydrogenlyase HycD (FHL);gene_id=Rv0084;logic_name=ena Chromosome ena mRNA 92328 93278 . + . ID=transcript:Rv0084;Parent=gene:Rv0084;Name=hycD-1;biotype=protein_coding;transcript_id=Rv0084 Chromosome ena exon 92328 93278 . + . Parent=transcript:Rv0084;Name=Rv0084-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0084-1;rank=1 Chromosome ena CDS 92328 93278 . + 0 ID=CDS:Rv0084;Parent=transcript:Rv0084;protein_id=Rv0084 ### -Chromosome ena gene 93289 93951 . + . ID=gene:Rv0085;Name=hycP;biotype=protein_coding;description=Possible hydrogenase HycP;gene_id=Rv0085;logic_name=ena +Chromosome ena gene 93289 93951 . + . ID=gene:Rv0085;Name=hycP;biotype=protein_coding;description=Possible hydrogenase HycP;gene_id=Rv0085;logic_name=ena Chromosome ena mRNA 93289 93951 . + . ID=transcript:Rv0085;Parent=gene:Rv0085;Name=hycP-1;biotype=protein_coding;transcript_id=Rv0085 Chromosome ena exon 93289 93951 . + . Parent=transcript:Rv0085;Name=Rv0085-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0085-1;rank=1 Chromosome ena CDS 93289 93951 . + 0 ID=CDS:Rv0085;Parent=transcript:Rv0085;protein_id=Rv0085 ### -Chromosome ena gene 93951 95417 . + . ID=gene:Rv0086;Name=hycQ;biotype=protein_coding;description=Possible hydrogenase HycQ;gene_id=Rv0086;logic_name=ena +Chromosome ena gene 93951 95417 . + . ID=gene:Rv0086;Name=hycQ;biotype=protein_coding;description=Possible hydrogenase HycQ;gene_id=Rv0086;logic_name=ena Chromosome ena mRNA 93951 95417 . + . ID=transcript:Rv0086;Parent=gene:Rv0086;Name=hycQ-1;biotype=protein_coding;transcript_id=Rv0086 Chromosome ena exon 93951 95417 . + . Parent=transcript:Rv0086;Name=Rv0086-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0086-1;rank=1 Chromosome ena CDS 93951 95417 . + 0 ID=CDS:Rv0086;Parent=transcript:Rv0086;protein_id=Rv0086 ### -Chromosome ena gene 95414 96892 . + . ID=gene:Rv0087;Name=hycE;biotype=protein_coding;description=Possible formate hydrogenase HycE (FHL);gene_id=Rv0087;logic_name=ena +Chromosome ena gene 95414 96892 . + . ID=gene:Rv0087;Name=hycE;biotype=protein_coding;description=Possible formate hydrogenase HycE (FHL);gene_id=Rv0087;logic_name=ena Chromosome ena mRNA 95414 96892 . + . ID=transcript:Rv0087;Parent=gene:Rv0087;Name=hycE-1;biotype=protein_coding;transcript_id=Rv0087 Chromosome ena exon 95414 96892 . + . Parent=transcript:Rv0087;Name=Rv0087-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0087-1;rank=1 Chromosome ena CDS 95414 96892 . + 0 ID=CDS:Rv0087;Parent=transcript:Rv0087;protein_id=Rv0087 ### -Chromosome ena gene 96927 97601 . + . ID=gene:Rv0088;biotype=protein_coding;description=Possible polyketide cyclase/dehydrase;gene_id=Rv0088;logic_name=ena +Chromosome ena gene 96927 97601 . + . ID=gene:Rv0088;biotype=protein_coding;description=Possible polyketide cyclase/dehydrase;gene_id=Rv0088;logic_name=ena Chromosome ena mRNA 96927 97601 . + . ID=transcript:Rv0088;Parent=gene:Rv0088;biotype=protein_coding;transcript_id=Rv0088 Chromosome ena exon 96927 97601 . + . Parent=transcript:Rv0088;Name=Rv0088-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0088-1;rank=1 Chromosome ena CDS 96927 97601 . + 0 ID=CDS:Rv0088;Parent=transcript:Rv0088;protein_id=Rv0088 ### -Chromosome ena gene 97758 98351 . + . ID=gene:Rv0089;biotype=protein_coding;description=Possible methyltransferase/methylase;gene_id=Rv0089;logic_name=ena +Chromosome ena gene 97758 98351 . + . ID=gene:Rv0089;biotype=protein_coding;description=Possible methyltransferase/methylase;gene_id=Rv0089;logic_name=ena Chromosome ena mRNA 97758 98351 . + . ID=transcript:Rv0089;Parent=gene:Rv0089;biotype=protein_coding;transcript_id=Rv0089 Chromosome ena exon 97758 98351 . + . Parent=transcript:Rv0089;Name=Rv0089-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0089-1;rank=1 Chromosome ena CDS 97758 98351 . + 0 ID=CDS:Rv0089;Parent=transcript:Rv0089;protein_id=Rv0089 ### -Chromosome ena gene 98480 99250 . + . ID=gene:Rv0090;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0090;logic_name=ena +Chromosome ena gene 98480 99250 . + . ID=gene:Rv0090;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0090;logic_name=ena Chromosome ena mRNA 98480 99250 . + . ID=transcript:Rv0090;Parent=gene:Rv0090;biotype=protein_coding;transcript_id=Rv0090 Chromosome ena exon 98480 99250 . + . Parent=transcript:Rv0090;Name=Rv0090-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0090-1;rank=1 Chromosome ena CDS 98480 99250 . + 0 ID=CDS:Rv0090;Parent=transcript:Rv0090;protein_id=Rv0090 ### -Chromosome ena gene 99684 100451 . + . ID=gene:Rv0091;Name=mtn;biotype=protein_coding;description=Probable bifunctional MTA/SAH nucleosidase Mtn: 5'-methylthioadenosine nucleosidase (methylthioadenosine methylthioribohydrolase) + S-adenosylhomocysteine nucleosidase (S-adenosyl-L-homocysteine homocysteinylribohydrolase);gene_id=Rv0091;logic_name=ena +Chromosome ena gene 99684 100451 . + . ID=gene:Rv0091;Name=mtn;biotype=protein_coding;description=Probable bifunctional MTA/SAH nucleosidase Mtn: 5'-methylthioadenosine nucleosidase (methylthioadenosine methylthioribohydrolase) + S-adenosylhomocysteine nucleosidase (S-adenosyl-L-homocysteine homocysteinylribohydrolase);gene_id=Rv0091;logic_name=ena Chromosome ena mRNA 99684 100451 . + . ID=transcript:Rv0091;Parent=gene:Rv0091;Name=mtn-1;biotype=protein_coding;transcript_id=Rv0091 Chromosome ena exon 99684 100451 . + . Parent=transcript:Rv0091;Name=Rv0091-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0091-1;rank=1 Chromosome ena CDS 99684 100451 . + 0 ID=CDS:Rv0091;Parent=transcript:Rv0091;protein_id=Rv0091 ### -Chromosome ena gene 100583 102868 . + . ID=gene:Rv0092;Name=ctpA;biotype=protein_coding;description=Cation transporter P-type ATPase a CtpA;gene_id=Rv0092;logic_name=ena +Chromosome ena gene 100583 102868 . + . ID=gene:Rv0092;Name=ctpA;biotype=protein_coding;description=Cation transporter P-type ATPase a CtpA;gene_id=Rv0092;logic_name=ena Chromosome ena mRNA 100583 102868 . + . ID=transcript:Rv0092;Parent=gene:Rv0092;Name=ctpA-1;biotype=protein_coding;transcript_id=Rv0092 Chromosome ena exon 100583 102868 . + . Parent=transcript:Rv0092;Name=Rv0092-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0092-1;rank=1 Chromosome ena CDS 100583 102868 . + 0 ID=CDS:Rv0092;Parent=transcript:Rv0092;protein_id=Rv0092 ### -Chromosome ena gene 102815 103663 . - . ID=gene:Rv0093c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0093c;logic_name=ena +Chromosome ena gene 102815 103663 . - . ID=gene:Rv0093c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0093c;logic_name=ena Chromosome ena mRNA 102815 103663 . - . ID=transcript:Rv0093c;Parent=gene:Rv0093c;biotype=protein_coding;transcript_id=Rv0093c Chromosome ena exon 102815 103663 . - . Parent=transcript:Rv0093c;Name=Rv0093c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0093c-1;rank=1 Chromosome ena CDS 102815 103663 . - 0 ID=CDS:Rv0093c;Parent=transcript:Rv0093c;protein_id=Rv0093c ### -Chromosome ena gene 103710 104663 . - . ID=gene:Rv0094c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0094c;logic_name=ena +Chromosome ena gene 103710 104663 . - . ID=gene:Rv0094c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0094c;logic_name=ena Chromosome ena mRNA 103710 104663 . - . ID=transcript:Rv0094c;Parent=gene:Rv0094c;biotype=protein_coding;transcript_id=Rv0094c Chromosome ena exon 103710 104663 . - . Parent=transcript:Rv0094c;Name=Rv0094c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0094c-1;rank=1 Chromosome ena CDS 103710 104663 . - 0 ID=CDS:Rv0094c;Parent=transcript:Rv0094c;protein_id=Rv0094c ### -Chromosome ena gene 104805 105215 . - . ID=gene:Rv0095c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0095c;logic_name=ena +Chromosome ena gene 104805 105215 . - . ID=gene:Rv0095c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0095c;logic_name=ena Chromosome ena mRNA 104805 105215 . - . ID=transcript:Rv0095c;Parent=gene:Rv0095c;biotype=protein_coding;transcript_id=Rv0095c Chromosome ena exon 104805 105215 . - . Parent=transcript:Rv0095c;Name=Rv0095c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0095c-1;rank=1 Chromosome ena CDS 104805 105215 . - 0 ID=CDS:Rv0095c;Parent=transcript:Rv0095c;protein_id=Rv0095c ### -Chromosome ena gene 105324 106715 . + . ID=gene:Rv0096;Name=PPE1;biotype=protein_coding;description=PPE family protein PPE1;gene_id=Rv0096;logic_name=ena +Chromosome ena gene 105324 106715 . + . ID=gene:Rv0096;Name=PPE1;biotype=protein_coding;description=PPE family protein PPE1;gene_id=Rv0096;logic_name=ena Chromosome ena mRNA 105324 106715 . + . ID=transcript:Rv0096;Parent=gene:Rv0096;Name=PPE1-1;biotype=protein_coding;transcript_id=Rv0096 Chromosome ena exon 105324 106715 . + . Parent=transcript:Rv0096;Name=Rv0096-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0096-1;rank=1 Chromosome ena CDS 105324 106715 . + 0 ID=CDS:Rv0096;Parent=transcript:Rv0096;protein_id=Rv0096 ### -Chromosome ena gene 106734 107603 . + . ID=gene:Rv0097;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0097;logic_name=ena +Chromosome ena gene 106734 107603 . + . ID=gene:Rv0097;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0097;logic_name=ena Chromosome ena mRNA 106734 107603 . + . ID=transcript:Rv0097;Parent=gene:Rv0097;biotype=protein_coding;transcript_id=Rv0097 Chromosome ena exon 106734 107603 . + . Parent=transcript:Rv0097;Name=Rv0097-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0097-1;rank=1 Chromosome ena CDS 106734 107603 . + 0 ID=CDS:Rv0097;Parent=transcript:Rv0097;protein_id=Rv0097 ### -Chromosome ena gene 107600 108151 . + . ID=gene:Rv0098;Name=fcoT;biotype=protein_coding;description=Probable fatty acyl CoA thioesterase type III FcoT;gene_id=Rv0098;logic_name=ena +Chromosome ena gene 107600 108151 . + . ID=gene:Rv0098;Name=fcoT;biotype=protein_coding;description=Probable fatty acyl CoA thioesterase type III FcoT;gene_id=Rv0098;logic_name=ena Chromosome ena mRNA 107600 108151 . + . ID=transcript:Rv0098;Parent=gene:Rv0098;Name=fcoT-1;biotype=protein_coding;transcript_id=Rv0098 Chromosome ena exon 107600 108151 . + . Parent=transcript:Rv0098;Name=Rv0098-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0098-1;rank=1 Chromosome ena CDS 107600 108151 . + 0 ID=CDS:Rv0098;Parent=transcript:Rv0098;protein_id=Rv0098 ### -Chromosome ena gene 108156 109778 . + . ID=gene:Rv0099;Name=fadD10;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD10 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0099;logic_name=ena +Chromosome ena gene 108156 109778 . + . ID=gene:Rv0099;Name=fadD10;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD10 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0099;logic_name=ena Chromosome ena mRNA 108156 109778 . + . ID=transcript:Rv0099;Parent=gene:Rv0099;Name=fadD10-1;biotype=protein_coding;transcript_id=Rv0099 Chromosome ena exon 108156 109778 . + . Parent=transcript:Rv0099;Name=Rv0099-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0099-1;rank=1 Chromosome ena CDS 108156 109778 . + 0 ID=CDS:Rv0099;Parent=transcript:Rv0099;protein_id=Rv0099 ### -Chromosome ena gene 109783 110019 . + . ID=gene:Rv0100;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0100;logic_name=ena +Chromosome ena gene 109783 110019 . + . ID=gene:Rv0100;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0100;logic_name=ena Chromosome ena mRNA 109783 110019 . + . ID=transcript:Rv0100;Parent=gene:Rv0100;biotype=protein_coding;transcript_id=Rv0100 Chromosome ena exon 109783 110019 . + . Parent=transcript:Rv0100;Name=Rv0100-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0100-1;rank=1 Chromosome ena CDS 109783 110019 . + 0 ID=CDS:Rv0100;Parent=transcript:Rv0100;protein_id=Rv0100 ### -Chromosome ena gene 110001 117539 . + . ID=gene:Rv0101;Name=nrp;biotype=protein_coding;description=Probable peptide synthetase Nrp (peptide synthase);gene_id=Rv0101;logic_name=ena +Chromosome ena gene 110001 117539 . + . ID=gene:Rv0101;Name=nrp;biotype=protein_coding;description=Probable peptide synthetase Nrp (peptide synthase);gene_id=Rv0101;logic_name=ena Chromosome ena mRNA 110001 117539 . + . ID=transcript:Rv0101;Parent=gene:Rv0101;Name=nrp-1;biotype=protein_coding;transcript_id=Rv0101 Chromosome ena exon 110001 117539 . + . Parent=transcript:Rv0101;Name=Rv0101-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0101-1;rank=1 Chromosome ena CDS 110001 117539 . + 0 ID=CDS:Rv0101;Parent=transcript:Rv0101;protein_id=Rv0101 ### -Chromosome ena gene 117714 119699 . + . ID=gene:Rv0102;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0102;logic_name=ena +Chromosome ena gene 117714 119699 . + . ID=gene:Rv0102;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0102;logic_name=ena Chromosome ena mRNA 117714 119699 . + . ID=transcript:Rv0102;Parent=gene:Rv0102;biotype=protein_coding;transcript_id=Rv0102 Chromosome ena exon 117714 119699 . + . Parent=transcript:Rv0102;Name=Rv0102-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0102-1;rank=1 Chromosome ena CDS 117714 119699 . + 0 ID=CDS:Rv0102;Parent=transcript:Rv0102;protein_id=Rv0102 ### -Chromosome ena gene 119915 122173 . - . ID=gene:Rv0103c;Name=ctpB;biotype=protein_coding;description=Probable cation-transporter P-type ATPase B CtpB;gene_id=Rv0103c;logic_name=ena +Chromosome ena gene 119915 122173 . - . ID=gene:Rv0103c;Name=ctpB;biotype=protein_coding;description=Probable cation-transporter P-type ATPase B CtpB;gene_id=Rv0103c;logic_name=ena Chromosome ena mRNA 119915 122173 . - . ID=transcript:Rv0103c;Parent=gene:Rv0103c;Name=ctpB-1;biotype=protein_coding;transcript_id=Rv0103c Chromosome ena exon 119915 122173 . - . Parent=transcript:Rv0103c;Name=Rv0103c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0103c-1;rank=1 Chromosome ena CDS 119915 122173 . - 0 ID=CDS:Rv0103c;Parent=transcript:Rv0103c;protein_id=Rv0103c ### -Chromosome ena gene 122317 123831 . + . ID=gene:Rv0104;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0104;logic_name=ena +Chromosome ena gene 122317 123831 . + . ID=gene:Rv0104;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0104;logic_name=ena Chromosome ena mRNA 122317 123831 . + . ID=transcript:Rv0104;Parent=gene:Rv0104;biotype=protein_coding;transcript_id=Rv0104 Chromosome ena exon 122317 123831 . + . Parent=transcript:Rv0104;Name=Rv0104-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0104-1;rank=1 Chromosome ena CDS 122317 123831 . + 0 ID=CDS:Rv0104;Parent=transcript:Rv0104;protein_id=Rv0104 ### -Chromosome ena gene 123980 124264 . - . ID=gene:Rv0105c;Name=rpmB1;biotype=protein_coding;description=50S ribosomal protein L28-1 RpmB1;gene_id=Rv0105c;logic_name=ena +Chromosome ena gene 123980 124264 . - . ID=gene:Rv0105c;Name=rpmB1;biotype=protein_coding;description=50S ribosomal protein L28-1 RpmB1;gene_id=Rv0105c;logic_name=ena Chromosome ena mRNA 123980 124264 . - . ID=transcript:Rv0105c;Parent=gene:Rv0105c;Name=rpmB1-1;biotype=protein_coding;transcript_id=Rv0105c Chromosome ena exon 123980 124264 . - . Parent=transcript:Rv0105c;Name=Rv0105c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0105c-1;rank=1 Chromosome ena CDS 123980 124264 . - 0 ID=CDS:Rv0105c;Parent=transcript:Rv0105c;protein_id=Rv0105c ### -Chromosome ena gene 124374 125570 . + . ID=gene:Rv0106;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0106;logic_name=ena +Chromosome ena gene 124374 125570 . + . ID=gene:Rv0106;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0106;logic_name=ena Chromosome ena mRNA 124374 125570 . + . ID=transcript:Rv0106;Parent=gene:Rv0106;biotype=protein_coding;transcript_id=Rv0106 Chromosome ena exon 124374 125570 . + . Parent=transcript:Rv0106;Name=Rv0106-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0106-1;rank=1 Chromosome ena CDS 124374 125570 . + 0 ID=CDS:Rv0106;Parent=transcript:Rv0106;protein_id=Rv0106 ### -Chromosome ena gene 125643 130541 . - . ID=gene:Rv0107c;Name=ctpI;biotype=protein_coding;description=Probable cation-transporter ATPase I CtpI;gene_id=Rv0107c;logic_name=ena +Chromosome ena gene 125643 130541 . - . ID=gene:Rv0107c;Name=ctpI;biotype=protein_coding;description=Probable cation-transporter ATPase I CtpI;gene_id=Rv0107c;logic_name=ena Chromosome ena mRNA 125643 130541 . - . ID=transcript:Rv0107c;Parent=gene:Rv0107c;Name=ctpI-1;biotype=protein_coding;transcript_id=Rv0107c Chromosome ena exon 125643 130541 . - . Parent=transcript:Rv0107c;Name=Rv0107c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0107c-1;rank=1 Chromosome ena CDS 125643 130541 . - 0 ID=CDS:Rv0107c;Parent=transcript:Rv0107c;protein_id=Rv0107c ### -Chromosome ena gene 130895 131104 . - . ID=gene:Rv0108c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0108c;logic_name=ena +Chromosome ena gene 130895 131104 . - . ID=gene:Rv0108c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0108c;logic_name=ena Chromosome ena mRNA 130895 131104 . - . ID=transcript:Rv0108c;Parent=gene:Rv0108c;biotype=protein_coding;transcript_id=Rv0108c Chromosome ena exon 130895 131104 . - . Parent=transcript:Rv0108c;Name=Rv0108c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0108c-1;rank=1 Chromosome ena CDS 130895 131104 . - 0 ID=CDS:Rv0108c;Parent=transcript:Rv0108c;protein_id=Rv0108c ### -Chromosome ena gene 131382 132872 . + . ID=gene:Rv0109;Name=PE_PGRS1;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS1;gene_id=Rv0109;logic_name=ena +Chromosome ena gene 131382 132872 . + . ID=gene:Rv0109;Name=PE_PGRS1;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS1;gene_id=Rv0109;logic_name=ena Chromosome ena mRNA 131382 132872 . + . ID=transcript:Rv0109;Parent=gene:Rv0109;Name=PE_PGRS1-1;biotype=protein_coding;transcript_id=Rv0109 Chromosome ena exon 131382 132872 . + . Parent=transcript:Rv0109;Name=Rv0109-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0109-1;rank=1 Chromosome ena CDS 131382 132872 . + 0 ID=CDS:Rv0109;Parent=transcript:Rv0109;protein_id=Rv0109 ### -Chromosome ena gene 133020 133769 . + . ID=gene:Rv0110;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0110;logic_name=ena +Chromosome ena gene 133020 133769 . + . ID=gene:Rv0110;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0110;logic_name=ena Chromosome ena mRNA 133020 133769 . + . ID=transcript:Rv0110;Parent=gene:Rv0110;biotype=protein_coding;transcript_id=Rv0110 Chromosome ena exon 133020 133769 . + . Parent=transcript:Rv0110;Name=Rv0110-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0110-1;rank=1 Chromosome ena CDS 133020 133769 . + 0 ID=CDS:Rv0110;Parent=transcript:Rv0110;protein_id=Rv0110 ### -Chromosome ena gene 133950 136007 . + . ID=gene:Rv0111;biotype=protein_coding;description=Possible transmembrane acyltransferase;gene_id=Rv0111;logic_name=ena +Chromosome ena gene 133950 136007 . + . ID=gene:Rv0111;biotype=protein_coding;description=Possible transmembrane acyltransferase;gene_id=Rv0111;logic_name=ena Chromosome ena mRNA 133950 136007 . + . ID=transcript:Rv0111;Parent=gene:Rv0111;biotype=protein_coding;transcript_id=Rv0111 Chromosome ena exon 133950 136007 . + . Parent=transcript:Rv0111;Name=Rv0111-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0111-1;rank=1 Chromosome ena CDS 133950 136007 . + 0 ID=CDS:Rv0111;Parent=transcript:Rv0111;protein_id=Rv0111 ### -Chromosome ena gene 136289 137245 . + . ID=gene:Rv0112;Name=gca;biotype=protein_coding;description=Possible GDP-mannose 4%2C6-dehydratase Gca (GDP-D-mannose dehydratase);gene_id=Rv0112;logic_name=ena +Chromosome ena gene 136289 137245 . + . ID=gene:Rv0112;Name=gca;biotype=protein_coding;description=Possible GDP-mannose 4%2C6-dehydratase Gca (GDP-D-mannose dehydratase);gene_id=Rv0112;logic_name=ena Chromosome ena mRNA 136289 137245 . + . ID=transcript:Rv0112;Parent=gene:Rv0112;Name=gca-1;biotype=protein_coding;transcript_id=Rv0112 Chromosome ena exon 136289 137245 . + . Parent=transcript:Rv0112;Name=Rv0112-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0112-1;rank=1 Chromosome ena CDS 136289 137245 . + 0 ID=CDS:Rv0112;Parent=transcript:Rv0112;protein_id=Rv0112 ### -Chromosome ena gene 137319 137909 . + . ID=gene:Rv0113;Name=gmhA;biotype=protein_coding;description=Probable sedoheptulose-7-phosphate isomerase GmhA (phosphoheptose isomerase);gene_id=Rv0113;logic_name=ena +Chromosome ena gene 137319 137909 . + . ID=gene:Rv0113;Name=gmhA;biotype=protein_coding;description=Probable sedoheptulose-7-phosphate isomerase GmhA (phosphoheptose isomerase);gene_id=Rv0113;logic_name=ena Chromosome ena mRNA 137319 137909 . + . ID=transcript:Rv0113;Parent=gene:Rv0113;Name=gmhA-1;biotype=protein_coding;transcript_id=Rv0113 Chromosome ena exon 137319 137909 . + . Parent=transcript:Rv0113;Name=Rv0113-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0113-1;rank=1 Chromosome ena CDS 137319 137909 . + 0 ID=CDS:Rv0113;Parent=transcript:Rv0113;protein_id=Rv0113 ### -Chromosome ena gene 137941 138513 . + . ID=gene:Rv0114;Name=gmhB;biotype=protein_coding;description=Possible D-alpha%2Cbeta-D-heptose-1%2C7-biphosphate phosphatase GmhB (D-glycero-D-manno-heptose 7-phosphate kinase);gene_id=Rv0114;logic_name=ena +Chromosome ena gene 137941 138513 . + . ID=gene:Rv0114;Name=gmhB;biotype=protein_coding;description=Possible D-alpha%2Cbeta-D-heptose-1%2C7-biphosphate phosphatase GmhB (D-glycero-D-manno-heptose 7-phosphate kinase);gene_id=Rv0114;logic_name=ena Chromosome ena mRNA 137941 138513 . + . ID=transcript:Rv0114;Parent=gene:Rv0114;Name=gmhB-1;biotype=protein_coding;transcript_id=Rv0114 Chromosome ena exon 137941 138513 . + . Parent=transcript:Rv0114;Name=Rv0114-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0114-1;rank=1 Chromosome ena CDS 137941 138513 . + 0 ID=CDS:Rv0114;Parent=transcript:Rv0114;protein_id=Rv0114 ### -Chromosome ena gene 138513 139673 . + . ID=gene:Rv0115;Name=hddA;biotype=protein_coding;description=Possible D-alpha-D-heptose-7-phosphate kinase HddA;gene_id=Rv0115;logic_name=ena +Chromosome ena gene 138513 139673 . + . ID=gene:Rv0115;Name=hddA;biotype=protein_coding;description=Possible D-alpha-D-heptose-7-phosphate kinase HddA;gene_id=Rv0115;logic_name=ena Chromosome ena mRNA 138513 139673 . + . ID=transcript:Rv0115;Parent=gene:Rv0115;Name=hddA-1;biotype=protein_coding;transcript_id=Rv0115 Chromosome ena exon 138513 139673 . + . Parent=transcript:Rv0115;Name=Rv0115-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0115-1;rank=1 Chromosome ena CDS 138513 139673 . + 0 ID=CDS:Rv0115;Parent=transcript:Rv0115;protein_id=Rv0115 ### -Chromosome ena gene 140267 141022 . - . ID=gene:Rv0116c;Name=ldtA;biotype=protein_coding;description=Probable L%2CD-transpeptidase LdtA;gene_id=Rv0116c;logic_name=ena +Chromosome ena gene 140267 141022 . - . ID=gene:Rv0116c;Name=ldtA;biotype=protein_coding;description=Probable L%2CD-transpeptidase LdtA;gene_id=Rv0116c;logic_name=ena Chromosome ena mRNA 140267 141022 . - . ID=transcript:Rv0116c;Parent=gene:Rv0116c;Name=ldtA-1;biotype=protein_coding;transcript_id=Rv0116c Chromosome ena exon 140267 141022 . - . Parent=transcript:Rv0116c;Name=Rv0116c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0116c-1;rank=1 Chromosome ena CDS 140267 141022 . - 0 ID=CDS:Rv0116c;Parent=transcript:Rv0116c;protein_id=Rv0116c ### -Chromosome ena gene 141200 142144 . + . ID=gene:Rv0117;Name=oxyS;biotype=protein_coding;description=Oxidative stress response regulatory protein OxyS;gene_id=Rv0117;logic_name=ena +Chromosome ena gene 141200 142144 . + . ID=gene:Rv0117;Name=oxyS;biotype=protein_coding;description=Oxidative stress response regulatory protein OxyS;gene_id=Rv0117;logic_name=ena Chromosome ena mRNA 141200 142144 . + . ID=transcript:Rv0117;Parent=gene:Rv0117;Name=oxyS-1;biotype=protein_coding;transcript_id=Rv0117 Chromosome ena exon 141200 142144 . + . Parent=transcript:Rv0117;Name=Rv0117-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0117-1;rank=1 Chromosome ena CDS 141200 142144 . + 0 ID=CDS:Rv0117;Parent=transcript:Rv0117;protein_id=Rv0117 ### -Chromosome ena gene 142128 143876 . - . ID=gene:Rv0118c;Name=oxcA;biotype=protein_coding;description=Probable oxalyl-CoA decarboxylase OxcA;gene_id=Rv0118c;logic_name=ena +Chromosome ena gene 142128 143876 . - . ID=gene:Rv0118c;Name=oxcA;biotype=protein_coding;description=Probable oxalyl-CoA decarboxylase OxcA;gene_id=Rv0118c;logic_name=ena Chromosome ena mRNA 142128 143876 . - . ID=transcript:Rv0118c;Parent=gene:Rv0118c;Name=oxcA-1;biotype=protein_coding;transcript_id=Rv0118c Chromosome ena exon 142128 143876 . - . Parent=transcript:Rv0118c;Name=Rv0118c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0118c-1;rank=1 Chromosome ena CDS 142128 143876 . - 0 ID=CDS:Rv0118c;Parent=transcript:Rv0118c;protein_id=Rv0118c ### -Chromosome ena gene 144049 145626 . + . ID=gene:Rv0119;Name=fadD7;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD7 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0119;logic_name=ena +Chromosome ena gene 144049 145626 . + . ID=gene:Rv0119;Name=fadD7;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD7 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0119;logic_name=ena Chromosome ena mRNA 144049 145626 . + . ID=transcript:Rv0119;Parent=gene:Rv0119;Name=fadD7-1;biotype=protein_coding;transcript_id=Rv0119 Chromosome ena exon 144049 145626 . + . Parent=transcript:Rv0119;Name=Rv0119-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0119-1;rank=1 Chromosome ena CDS 144049 145626 . + 0 ID=CDS:Rv0119;Parent=transcript:Rv0119;protein_id=Rv0119 ### -Chromosome ena gene 145627 147771 . - . ID=gene:Rv0120c;Name=fusA2;biotype=protein_coding;description=Probable elongation factor G FusA2 (EF-G);gene_id=Rv0120c;logic_name=ena +Chromosome ena gene 145627 147771 . - . ID=gene:Rv0120c;Name=fusA2;biotype=protein_coding;description=Probable elongation factor G FusA2 (EF-G);gene_id=Rv0120c;logic_name=ena Chromosome ena mRNA 145627 147771 . - . ID=transcript:Rv0120c;Parent=gene:Rv0120c;Name=fusA2-1;biotype=protein_coding;transcript_id=Rv0120c Chromosome ena exon 145627 147771 . - . Parent=transcript:Rv0120c;Name=Rv0120c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0120c-1;rank=1 Chromosome ena CDS 145627 147771 . - 0 ID=CDS:Rv0120c;Parent=transcript:Rv0120c;protein_id=Rv0120c ### -Chromosome ena gene 147908 148342 . - . ID=gene:Rv0121c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0121c;logic_name=ena +Chromosome ena gene 147908 148342 . - . ID=gene:Rv0121c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0121c;logic_name=ena Chromosome ena mRNA 147908 148342 . - . ID=transcript:Rv0121c;Parent=gene:Rv0121c;biotype=protein_coding;transcript_id=Rv0121c Chromosome ena exon 147908 148342 . - . Parent=transcript:Rv0121c;Name=Rv0121c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0121c-1;rank=1 Chromosome ena CDS 147908 148342 . - 0 ID=CDS:Rv0121c;Parent=transcript:Rv0121c;protein_id=Rv0121c ### -Chromosome ena gene 148491 148859 . + . ID=gene:Rv0122;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0122;logic_name=ena +Chromosome ena gene 148491 148859 . + . ID=gene:Rv0122;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0122;logic_name=ena Chromosome ena mRNA 148491 148859 . + . ID=transcript:Rv0122;Parent=gene:Rv0122;biotype=protein_coding;transcript_id=Rv0122 Chromosome ena exon 148491 148859 . + . Parent=transcript:Rv0122;Name=Rv0122-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0122-1;rank=1 Chromosome ena CDS 148491 148859 . + 0 ID=CDS:Rv0122;Parent=transcript:Rv0122;protein_id=Rv0122 ### -Chromosome ena gene 148856 149224 . + . ID=gene:Rv0123;biotype=protein_coding;description=Unknown protein;gene_id=Rv0123;logic_name=ena +Chromosome ena gene 148856 149224 . + . ID=gene:Rv0123;biotype=protein_coding;description=Unknown protein;gene_id=Rv0123;logic_name=ena Chromosome ena mRNA 148856 149224 . + . ID=transcript:Rv0123;Parent=gene:Rv0123;biotype=protein_coding;transcript_id=Rv0123 Chromosome ena exon 148856 149224 . + . Parent=transcript:Rv0123;Name=Rv0123-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0123-1;rank=1 Chromosome ena CDS 148856 149224 . + 0 ID=CDS:Rv0123;Parent=transcript:Rv0123;protein_id=Rv0123 ### -Chromosome ena gene 149533 150996 . + . ID=gene:Rv0124;Name=PE_PGRS2;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS2;gene_id=Rv0124;logic_name=ena +Chromosome ena gene 149533 150996 . + . ID=gene:Rv0124;Name=PE_PGRS2;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS2;gene_id=Rv0124;logic_name=ena Chromosome ena mRNA 149533 150996 . + . ID=transcript:Rv0124;Parent=gene:Rv0124;Name=PE_PGRS2-1;biotype=protein_coding;transcript_id=Rv0124 Chromosome ena exon 149533 150996 . + . Parent=transcript:Rv0124;Name=Rv0124-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0124-1;rank=1 Chromosome ena CDS 149533 150996 . + 0 ID=CDS:Rv0124;Parent=transcript:Rv0124;protein_id=Rv0124 ### -Chromosome ena gene 151148 152215 . + . ID=gene:Rv0125;Name=pepA;biotype=protein_coding;description=Probable serine protease PepA (serine proteinase) (MTB32A);gene_id=Rv0125;logic_name=ena +Chromosome ena gene 151148 152215 . + . ID=gene:Rv0125;Name=pepA;biotype=protein_coding;description=Probable serine protease PepA (serine proteinase) (MTB32A);gene_id=Rv0125;logic_name=ena Chromosome ena mRNA 151148 152215 . + . ID=transcript:Rv0125;Parent=gene:Rv0125;Name=pepA-1;biotype=protein_coding;transcript_id=Rv0125 Chromosome ena exon 151148 152215 . + . Parent=transcript:Rv0125;Name=Rv0125-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0125-1;rank=1 Chromosome ena CDS 151148 152215 . + 0 ID=CDS:Rv0125;Parent=transcript:Rv0125;protein_id=Rv0125 ### -Chromosome ena gene 152324 154129 . + . ID=gene:Rv0126;Name=treS;biotype=protein_coding;description=Trehalose synthase TreS;gene_id=Rv0126;logic_name=ena +Chromosome ena gene 152324 154129 . + . ID=gene:Rv0126;Name=treS;biotype=protein_coding;description=Trehalose synthase TreS;gene_id=Rv0126;logic_name=ena Chromosome ena mRNA 152324 154129 . + . ID=transcript:Rv0126;Parent=gene:Rv0126;Name=treS-1;biotype=protein_coding;transcript_id=Rv0126 Chromosome ena exon 152324 154129 . + . Parent=transcript:Rv0126;Name=Rv0126-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0126-1;rank=1 Chromosome ena CDS 152324 154129 . + 0 ID=CDS:Rv0126;Parent=transcript:Rv0126;protein_id=Rv0126 ### -Chromosome ena gene 154232 155599 . + . ID=gene:Rv0127;Name=mak;biotype=protein_coding;description=Maltokinase Mak;gene_id=Rv0127;logic_name=ena +Chromosome ena gene 154232 155599 . + . ID=gene:Rv0127;Name=mak;biotype=protein_coding;description=Maltokinase Mak;gene_id=Rv0127;logic_name=ena Chromosome ena mRNA 154232 155599 . + . ID=transcript:Rv0127;Parent=gene:Rv0127;Name=mak-1;biotype=protein_coding;transcript_id=Rv0127 Chromosome ena exon 154232 155599 . + . Parent=transcript:Rv0127;Name=Rv0127-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0127-1;rank=1 Chromosome ena CDS 154232 155599 . + 0 ID=CDS:Rv0127;Parent=transcript:Rv0127;protein_id=Rv0127 ### -Chromosome ena gene 155667 156446 . + . ID=gene:Rv0128;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0128;logic_name=ena +Chromosome ena gene 155667 156446 . + . ID=gene:Rv0128;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0128;logic_name=ena Chromosome ena mRNA 155667 156446 . + . ID=transcript:Rv0128;Parent=gene:Rv0128;biotype=protein_coding;transcript_id=Rv0128 Chromosome ena exon 155667 156446 . + . Parent=transcript:Rv0128;Name=Rv0128-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0128-1;rank=1 Chromosome ena CDS 155667 156446 . + 0 ID=CDS:Rv0128;Parent=transcript:Rv0128;protein_id=Rv0128 ### -Chromosome ena gene 156578 157600 . - . ID=gene:Rv0129c;Name=fbpC;biotype=protein_coding;description=Secreted antigen 85-C FbpC (85C) (antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C);gene_id=Rv0129c;logic_name=ena +Chromosome ena gene 156578 157600 . - . ID=gene:Rv0129c;Name=fbpC;biotype=protein_coding;description=Secreted antigen 85-C FbpC (85C) (antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C);gene_id=Rv0129c;logic_name=ena Chromosome ena mRNA 156578 157600 . - . ID=transcript:Rv0129c;Parent=gene:Rv0129c;Name=fbpC-1;biotype=protein_coding;transcript_id=Rv0129c Chromosome ena exon 156578 157600 . - . Parent=transcript:Rv0129c;Name=Rv0129c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0129c-1;rank=1 Chromosome ena CDS 156578 157600 . - 0 ID=CDS:Rv0129c;Parent=transcript:Rv0129c;protein_id=Rv0129c ### -Chromosome ena gene 157847 158302 . + . ID=gene:Rv0130;Name=htdZ;biotype=protein_coding;description=Probable 3-hydroxyl-thioester dehydratase;gene_id=Rv0130;logic_name=ena +Chromosome ena gene 157847 158302 . + . ID=gene:Rv0130;Name=htdZ;biotype=protein_coding;description=Probable 3-hydroxyl-thioester dehydratase;gene_id=Rv0130;logic_name=ena Chromosome ena mRNA 157847 158302 . + . ID=transcript:Rv0130;Parent=gene:Rv0130;Name=htdZ-1;biotype=protein_coding;transcript_id=Rv0130 Chromosome ena exon 157847 158302 . + . Parent=transcript:Rv0130;Name=Rv0130-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0130-1;rank=1 Chromosome ena CDS 157847 158302 . + 0 ID=CDS:Rv0130;Parent=transcript:Rv0130;protein_id=Rv0130 ### -Chromosome ena gene 158315 159658 . - . ID=gene:Rv0131c;Name=fadE1;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE1;gene_id=Rv0131c;logic_name=ena +Chromosome ena gene 158315 159658 . - . ID=gene:Rv0131c;Name=fadE1;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE1;gene_id=Rv0131c;logic_name=ena Chromosome ena mRNA 158315 159658 . - . ID=transcript:Rv0131c;Parent=gene:Rv0131c;Name=fadE1-1;biotype=protein_coding;transcript_id=Rv0131c Chromosome ena exon 158315 159658 . - . Parent=transcript:Rv0131c;Name=Rv0131c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0131c-1;rank=1 Chromosome ena CDS 158315 159658 . - 0 ID=CDS:Rv0131c;Parent=transcript:Rv0131c;protein_id=Rv0131c ### -Chromosome ena gene 159700 160782 . - . ID=gene:Rv0132c;Name=fgd2;biotype=protein_coding;description=Putative F420-dependent glucose-6-phosphate dehydrogenase Fgd2;gene_id=Rv0132c;logic_name=ena +Chromosome ena gene 159700 160782 . - . ID=gene:Rv0132c;Name=fgd2;biotype=protein_coding;description=Putative F420-dependent glucose-6-phosphate dehydrogenase Fgd2;gene_id=Rv0132c;logic_name=ena Chromosome ena mRNA 159700 160782 . - . ID=transcript:Rv0132c;Parent=gene:Rv0132c;Name=fgd2-1;biotype=protein_coding;transcript_id=Rv0132c Chromosome ena exon 159700 160782 . - . Parent=transcript:Rv0132c;Name=Rv0132c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0132c-1;rank=1 Chromosome ena CDS 159700 160782 . - 0 ID=CDS:Rv0132c;Parent=transcript:Rv0132c;protein_id=Rv0132c ### -Chromosome ena gene 160869 161474 . + . ID=gene:Rv0133;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0133;logic_name=ena +Chromosome ena gene 160869 161474 . + . ID=gene:Rv0133;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0133;logic_name=ena Chromosome ena mRNA 160869 161474 . + . ID=transcript:Rv0133;Parent=gene:Rv0133;biotype=protein_coding;transcript_id=Rv0133 Chromosome ena exon 160869 161474 . + . Parent=transcript:Rv0133;Name=Rv0133-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0133-1;rank=1 Chromosome ena CDS 160869 161474 . + 0 ID=CDS:Rv0133;Parent=transcript:Rv0133;protein_id=Rv0133 ### -Chromosome ena gene 161771 162673 . + . ID=gene:Rv0134;Name=ephF;biotype=protein_coding;description=Possible epoxide hydrolase EphF (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv0134;logic_name=ena +Chromosome ena gene 161771 162673 . + . ID=gene:Rv0134;Name=ephF;biotype=protein_coding;description=Possible epoxide hydrolase EphF (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv0134;logic_name=ena Chromosome ena mRNA 161771 162673 . + . ID=transcript:Rv0134;Parent=gene:Rv0134;Name=ephF-1;biotype=protein_coding;transcript_id=Rv0134 Chromosome ena exon 161771 162673 . + . Parent=transcript:Rv0134;Name=Rv0134-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0134-1;rank=1 Chromosome ena CDS 161771 162673 . + 0 ID=CDS:Rv0134;Parent=transcript:Rv0134;protein_id=Rv0134 ### -Chromosome ena gene 162644 163249 . - . ID=gene:Rv0135c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0135c;logic_name=ena +Chromosome ena gene 162644 163249 . - . ID=gene:Rv0135c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0135c;logic_name=ena Chromosome ena mRNA 162644 163249 . - . ID=transcript:Rv0135c;Parent=gene:Rv0135c;biotype=protein_coding;transcript_id=Rv0135c Chromosome ena exon 162644 163249 . - . Parent=transcript:Rv0135c;Name=Rv0135c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0135c-1;rank=1 Chromosome ena CDS 162644 163249 . - 0 ID=CDS:Rv0135c;Parent=transcript:Rv0135c;protein_id=Rv0135c ### -Chromosome ena gene 163366 164691 . + . ID=gene:Rv0136;Name=cyp138;biotype=protein_coding;description=Probable cytochrome P450 138 Cyp138;gene_id=Rv0136;logic_name=ena +Chromosome ena gene 163366 164691 . + . ID=gene:Rv0136;Name=cyp138;biotype=protein_coding;description=Probable cytochrome P450 138 Cyp138;gene_id=Rv0136;logic_name=ena Chromosome ena mRNA 163366 164691 . + . ID=transcript:Rv0136;Parent=gene:Rv0136;Name=cyp138-1;biotype=protein_coding;transcript_id=Rv0136 Chromosome ena exon 163366 164691 . + . Parent=transcript:Rv0136;Name=Rv0136-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0136-1;rank=1 Chromosome ena CDS 163366 164691 . + 0 ID=CDS:Rv0136;Parent=transcript:Rv0136;protein_id=Rv0136 ### -Chromosome ena gene 164712 165260 . - . ID=gene:Rv0137c;Name=msrA;biotype=protein_coding;description=Probable peptide methionine sulfoxide reductase MsrA (protein-methionine-S-oxide reductase) (peptide met(O) reductase);gene_id=Rv0137c;logic_name=ena +Chromosome ena gene 164712 165260 . - . ID=gene:Rv0137c;Name=msrA;biotype=protein_coding;description=Probable peptide methionine sulfoxide reductase MsrA (protein-methionine-S-oxide reductase) (peptide met(O) reductase);gene_id=Rv0137c;logic_name=ena Chromosome ena mRNA 164712 165260 . - . ID=transcript:Rv0137c;Parent=gene:Rv0137c;Name=msrA-1;biotype=protein_coding;transcript_id=Rv0137c Chromosome ena exon 164712 165260 . - . Parent=transcript:Rv0137c;Name=Rv0137c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0137c-1;rank=1 Chromosome ena CDS 164712 165260 . - 0 ID=CDS:Rv0137c;Parent=transcript:Rv0137c;protein_id=Rv0137c ### -Chromosome ena gene 165323 165826 . + . ID=gene:Rv0138;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0138;logic_name=ena +Chromosome ena gene 165323 165826 . + . ID=gene:Rv0138;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0138;logic_name=ena Chromosome ena mRNA 165323 165826 . + . ID=transcript:Rv0138;Parent=gene:Rv0138;biotype=protein_coding;transcript_id=Rv0138 Chromosome ena exon 165323 165826 . + . Parent=transcript:Rv0138;Name=Rv0138-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0138-1;rank=1 Chromosome ena CDS 165323 165826 . + 0 ID=CDS:Rv0138;Parent=transcript:Rv0138;protein_id=Rv0138 ### -Chromosome ena gene 165827 166849 . + . ID=gene:Rv0139;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0139;logic_name=ena +Chromosome ena gene 165827 166849 . + . ID=gene:Rv0139;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0139;logic_name=ena Chromosome ena mRNA 165827 166849 . + . ID=transcript:Rv0139;Parent=gene:Rv0139;biotype=protein_coding;transcript_id=Rv0139 Chromosome ena exon 165827 166849 . + . Parent=transcript:Rv0139;Name=Rv0139-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0139-1;rank=1 Chromosome ena CDS 165827 166849 . + 0 ID=CDS:Rv0139;Parent=transcript:Rv0139;protein_id=Rv0139 ### -Chromosome ena gene 166910 167290 . + . ID=gene:Rv0140;biotype=protein_coding;description=Conserved protein;gene_id=Rv0140;logic_name=ena +Chromosome ena gene 166910 167290 . + . ID=gene:Rv0140;biotype=protein_coding;description=Conserved protein;gene_id=Rv0140;logic_name=ena Chromosome ena mRNA 166910 167290 . + . ID=transcript:Rv0140;Parent=gene:Rv0140;biotype=protein_coding;transcript_id=Rv0140 Chromosome ena exon 166910 167290 . + . Parent=transcript:Rv0140;Name=Rv0140-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0140-1;rank=1 Chromosome ena CDS 166910 167290 . + 0 ID=CDS:Rv0140;Parent=transcript:Rv0140;protein_id=Rv0140 ### -Chromosome ena gene 167271 167681 . - . ID=gene:Rv0141c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0141c;logic_name=ena +Chromosome ena gene 167271 167681 . - . ID=gene:Rv0141c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0141c;logic_name=ena Chromosome ena mRNA 167271 167681 . - . ID=transcript:Rv0141c;Parent=gene:Rv0141c;biotype=protein_coding;transcript_id=Rv0141c Chromosome ena exon 167271 167681 . - . Parent=transcript:Rv0141c;Name=Rv0141c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0141c-1;rank=1 Chromosome ena CDS 167271 167681 . - 0 ID=CDS:Rv0141c;Parent=transcript:Rv0141c;protein_id=Rv0141c ### -Chromosome ena gene 167711 168637 . + . ID=gene:Rv0142;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0142;logic_name=ena +Chromosome ena gene 167711 168637 . + . ID=gene:Rv0142;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0142;logic_name=ena Chromosome ena mRNA 167711 168637 . + . ID=transcript:Rv0142;Parent=gene:Rv0142;biotype=protein_coding;transcript_id=Rv0142 Chromosome ena exon 167711 168637 . + . Parent=transcript:Rv0142;Name=Rv0142-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0142-1;rank=1 Chromosome ena CDS 167711 168637 . + 0 ID=CDS:Rv0142;Parent=transcript:Rv0142;protein_id=Rv0142 ### -Chromosome ena gene 168704 170182 . - . ID=gene:Rv0143c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0143c;logic_name=ena +Chromosome ena gene 168704 170182 . - . ID=gene:Rv0143c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0143c;logic_name=ena Chromosome ena mRNA 168704 170182 . - . ID=transcript:Rv0143c;Parent=gene:Rv0143c;biotype=protein_coding;transcript_id=Rv0143c Chromosome ena exon 168704 170182 . - . Parent=transcript:Rv0143c;Name=Rv0143c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0143c-1;rank=1 Chromosome ena CDS 168704 170182 . - 0 ID=CDS:Rv0143c;Parent=transcript:Rv0143c;protein_id=Rv0143c ### -Chromosome ena gene 170284 171126 . + . ID=gene:Rv0144;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0144;logic_name=ena +Chromosome ena gene 170284 171126 . + . ID=gene:Rv0144;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0144;logic_name=ena Chromosome ena mRNA 170284 171126 . + . ID=transcript:Rv0144;Parent=gene:Rv0144;biotype=protein_coding;transcript_id=Rv0144 Chromosome ena exon 170284 171126 . + . Parent=transcript:Rv0144;Name=Rv0144-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0144-1;rank=1 Chromosome ena CDS 170284 171126 . + 0 ID=CDS:Rv0144;Parent=transcript:Rv0144;protein_id=Rv0144 ### -Chromosome ena gene 171215 172168 . + . ID=gene:Rv0145;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0145;logic_name=ena +Chromosome ena gene 171215 172168 . + . ID=gene:Rv0145;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0145;logic_name=ena Chromosome ena mRNA 171215 172168 . + . ID=transcript:Rv0145;Parent=gene:Rv0145;biotype=protein_coding;transcript_id=Rv0145 Chromosome ena exon 171215 172168 . + . Parent=transcript:Rv0145;Name=Rv0145-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0145-1;rank=1 Chromosome ena CDS 171215 172168 . + 0 ID=CDS:Rv0145;Parent=transcript:Rv0145;protein_id=Rv0145 ### -Chromosome ena gene 172211 173143 . + . ID=gene:Rv0146;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0146;logic_name=ena +Chromosome ena gene 172211 173143 . + . ID=gene:Rv0146;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0146;logic_name=ena Chromosome ena mRNA 172211 173143 . + . ID=transcript:Rv0146;Parent=gene:Rv0146;biotype=protein_coding;transcript_id=Rv0146 Chromosome ena exon 172211 173143 . + . Parent=transcript:Rv0146;Name=Rv0146-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0146-1;rank=1 Chromosome ena CDS 172211 173143 . + 0 ID=CDS:Rv0146;Parent=transcript:Rv0146;protein_id=Rv0146 ### -Chromosome ena gene 173238 174758 . + . ID=gene:Rv0147;biotype=protein_coding;description=Probable aldehyde dehydrogenase (NAD+) dependent;gene_id=Rv0147;logic_name=ena +Chromosome ena gene 173238 174758 . + . ID=gene:Rv0147;biotype=protein_coding;description=Probable aldehyde dehydrogenase (NAD+) dependent;gene_id=Rv0147;logic_name=ena Chromosome ena mRNA 173238 174758 . + . ID=transcript:Rv0147;Parent=gene:Rv0147;biotype=protein_coding;transcript_id=Rv0147 Chromosome ena exon 173238 174758 . + . Parent=transcript:Rv0147;Name=Rv0147-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0147-1;rank=1 Chromosome ena CDS 173238 174758 . + 0 ID=CDS:Rv0147;Parent=transcript:Rv0147;protein_id=Rv0147 ### -Chromosome ena gene 174833 175693 . + . ID=gene:Rv0148;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0148;logic_name=ena +Chromosome ena gene 174833 175693 . + . ID=gene:Rv0148;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0148;logic_name=ena Chromosome ena mRNA 174833 175693 . + . ID=transcript:Rv0148;Parent=gene:Rv0148;biotype=protein_coding;transcript_id=Rv0148 Chromosome ena exon 174833 175693 . + . Parent=transcript:Rv0148;Name=Rv0148-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0148-1;rank=1 Chromosome ena CDS 174833 175693 . + 0 ID=CDS:Rv0148;Parent=transcript:Rv0148;protein_id=Rv0148 ### -Chromosome ena gene 175700 176668 . + . ID=gene:Rv0149;biotype=protein_coding;description=Possible quinone oxidoreductase (NADPH:quinone oxidoreductase) (zeta-crystallin);gene_id=Rv0149;logic_name=ena +Chromosome ena gene 175700 176668 . + . ID=gene:Rv0149;biotype=protein_coding;description=Possible quinone oxidoreductase (NADPH:quinone oxidoreductase) (zeta-crystallin);gene_id=Rv0149;logic_name=ena Chromosome ena mRNA 175700 176668 . + . ID=transcript:Rv0149;Parent=gene:Rv0149;biotype=protein_coding;transcript_id=Rv0149 Chromosome ena exon 175700 176668 . + . Parent=transcript:Rv0149;Name=Rv0149-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0149-1;rank=1 Chromosome ena CDS 175700 176668 . + 0 ID=CDS:Rv0149;Parent=transcript:Rv0149;protein_id=Rv0149 ### -Chromosome ena gene 176665 176952 . - . ID=gene:Rv0150c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0150c;logic_name=ena +Chromosome ena gene 176665 176952 . - . ID=gene:Rv0150c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0150c;logic_name=ena Chromosome ena mRNA 176665 176952 . - . ID=transcript:Rv0150c;Parent=gene:Rv0150c;biotype=protein_coding;transcript_id=Rv0150c Chromosome ena exon 176665 176952 . - . Parent=transcript:Rv0150c;Name=Rv0150c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0150c-1;rank=1 Chromosome ena CDS 176665 176952 . - 0 ID=CDS:Rv0150c;Parent=transcript:Rv0150c;protein_id=Rv0150c ### -Chromosome ena gene 177543 179309 . - . ID=gene:Rv0151c;Name=PE1;biotype=protein_coding;description=PE family protein PE1;gene_id=Rv0151c;logic_name=ena +Chromosome ena gene 177543 179309 . - . ID=gene:Rv0151c;Name=PE1;biotype=protein_coding;description=PE family protein PE1;gene_id=Rv0151c;logic_name=ena Chromosome ena mRNA 177543 179309 . - . ID=transcript:Rv0151c;Parent=gene:Rv0151c;Name=PE1-1;biotype=protein_coding;transcript_id=Rv0151c Chromosome ena exon 177543 179309 . - . Parent=transcript:Rv0151c;Name=Rv0151c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0151c-1;rank=1 Chromosome ena CDS 177543 179309 . - 0 ID=CDS:Rv0151c;Parent=transcript:Rv0151c;protein_id=Rv0151c ### -Chromosome ena gene 179319 180896 . - . ID=gene:Rv0152c;Name=PE2;biotype=protein_coding;description=PE family protein PE2;gene_id=Rv0152c;logic_name=ena +Chromosome ena gene 179319 180896 . - . ID=gene:Rv0152c;Name=PE2;biotype=protein_coding;description=PE family protein PE2;gene_id=Rv0152c;logic_name=ena Chromosome ena mRNA 179319 180896 . - . ID=transcript:Rv0152c;Parent=gene:Rv0152c;Name=PE2-1;biotype=protein_coding;transcript_id=Rv0152c Chromosome ena exon 179319 180896 . - . Parent=transcript:Rv0152c;Name=Rv0152c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0152c-1;rank=1 Chromosome ena CDS 179319 180896 . - 0 ID=CDS:Rv0152c;Parent=transcript:Rv0152c;protein_id=Rv0152c ### -Chromosome ena gene 181155 181985 . - . ID=gene:Rv0153c;Name=ptbB;biotype=protein_coding;description=Phosphotyrosine protein phosphatase PTPB (protein-tyrosine-phosphatase) (PTPase);gene_id=Rv0153c;logic_name=ena +Chromosome ena gene 181155 181985 . - . ID=gene:Rv0153c;Name=ptbB;biotype=protein_coding;description=Phosphotyrosine protein phosphatase PTPB (protein-tyrosine-phosphatase) (PTPase);gene_id=Rv0153c;logic_name=ena Chromosome ena mRNA 181155 181985 . - . ID=transcript:Rv0153c;Parent=gene:Rv0153c;Name=ptbB-1;biotype=protein_coding;transcript_id=Rv0153c Chromosome ena exon 181155 181985 . - . Parent=transcript:Rv0153c;Name=Rv0153c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0153c-1;rank=1 Chromosome ena CDS 181155 181985 . - 0 ID=CDS:Rv0153c;Parent=transcript:Rv0153c;protein_id=Rv0153c ### -Chromosome ena gene 181987 183198 . - . ID=gene:Rv0154c;Name=fadE2;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE2;gene_id=Rv0154c;logic_name=ena +Chromosome ena gene 181987 183198 . - . ID=gene:Rv0154c;Name=fadE2;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE2;gene_id=Rv0154c;logic_name=ena Chromosome ena mRNA 181987 183198 . - . ID=transcript:Rv0154c;Parent=gene:Rv0154c;Name=fadE2-1;biotype=protein_coding;transcript_id=Rv0154c Chromosome ena exon 181987 183198 . - . Parent=transcript:Rv0154c;Name=Rv0154c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0154c-1;rank=1 Chromosome ena CDS 181987 183198 . - 0 ID=CDS:Rv0154c;Parent=transcript:Rv0154c;protein_id=Rv0154c ### -Chromosome ena gene 183622 184722 . + . ID=gene:Rv0155;Name=pntAa;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit alpha) PntAa [first part%3B catalytic part] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha);gene_id=Rv0155;logic_name=ena +Chromosome ena gene 183622 184722 . + . ID=gene:Rv0155;Name=pntAa;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit alpha) PntAa [first part%3B catalytic part] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha);gene_id=Rv0155;logic_name=ena Chromosome ena mRNA 183622 184722 . + . ID=transcript:Rv0155;Parent=gene:Rv0155;Name=pntAa-1;biotype=protein_coding;transcript_id=Rv0155 Chromosome ena exon 183622 184722 . + . Parent=transcript:Rv0155;Name=Rv0155-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0155-1;rank=1 Chromosome ena CDS 183622 184722 . + 0 ID=CDS:Rv0155;Parent=transcript:Rv0155;protein_id=Rv0155 ### -Chromosome ena gene 184723 185055 . + . ID=gene:Rv0156;Name=pntAb;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit alpha) PntAb [second part%3B integral membrane protein] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha);gene_id=Rv0156;logic_name=ena +Chromosome ena gene 184723 185055 . + . ID=gene:Rv0156;Name=pntAb;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit alpha) PntAb [second part%3B integral membrane protein] (pyridine nucleotide transhydrogenase subunit alpha) (nicotinamide nucleotide transhydrogenase subunit alpha);gene_id=Rv0156;logic_name=ena Chromosome ena mRNA 184723 185055 . + . ID=transcript:Rv0156;Parent=gene:Rv0156;Name=pntAb-1;biotype=protein_coding;transcript_id=Rv0156 Chromosome ena exon 184723 185055 . + . Parent=transcript:Rv0156;Name=Rv0156-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0156-1;rank=1 Chromosome ena CDS 184723 185055 . + 0 ID=CDS:Rv0156;Parent=transcript:Rv0156;protein_id=Rv0156 ### -Chromosome ena gene 185052 186479 . + . ID=gene:Rv0157;Name=pntB;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit beta) PntB [integral membrane protein] (pyridine nucleotide transhydrogenase subunit beta) (nicotinamide nucleotide transhydrogenase subunit beta);gene_id=Rv0157;logic_name=ena +Chromosome ena gene 185052 186479 . + . ID=gene:Rv0157;Name=pntB;biotype=protein_coding;description=Probable NAD(P) transhydrogenase (subunit beta) PntB [integral membrane protein] (pyridine nucleotide transhydrogenase subunit beta) (nicotinamide nucleotide transhydrogenase subunit beta);gene_id=Rv0157;logic_name=ena Chromosome ena mRNA 185052 186479 . + . ID=transcript:Rv0157;Parent=gene:Rv0157;Name=pntB-1;biotype=protein_coding;transcript_id=Rv0157 Chromosome ena exon 185052 186479 . + . Parent=transcript:Rv0157;Name=Rv0157-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0157-1;rank=1 Chromosome ena CDS 185052 186479 . + 0 ID=CDS:Rv0157;Parent=transcript:Rv0157;protein_id=Rv0157 ### -Chromosome ena gene 186495 186623 . - . ID=gene:Rv0157A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0157A;logic_name=ena +Chromosome ena gene 186495 186623 . - . ID=gene:Rv0157A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0157A;logic_name=ena Chromosome ena mRNA 186495 186623 . - . ID=transcript:Rv0157A;Parent=gene:Rv0157A;biotype=protein_coding;transcript_id=Rv0157A Chromosome ena exon 186495 186623 . - . Parent=transcript:Rv0157A;Name=Rv0157A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0157A-1;rank=1 Chromosome ena CDS 186495 186623 . - 0 ID=CDS:Rv0157A;Parent=transcript:Rv0157A;protein_id=Rv0157A ### -Chromosome ena gene 186785 187429 . + . ID=gene:Rv0158;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0158;logic_name=ena +Chromosome ena gene 186785 187429 . + . ID=gene:Rv0158;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0158;logic_name=ena Chromosome ena mRNA 186785 187429 . + . ID=transcript:Rv0158;Parent=gene:Rv0158;biotype=protein_coding;transcript_id=Rv0158 Chromosome ena exon 186785 187429 . + . Parent=transcript:Rv0158;Name=Rv0158-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0158-1;rank=1 Chromosome ena CDS 186785 187429 . + 0 ID=CDS:Rv0158;Parent=transcript:Rv0158;protein_id=Rv0158 ### -Chromosome ena gene 187433 188839 . - . ID=gene:Rv0159c;Name=PE3;biotype=protein_coding;description=PE family protein PE3;gene_id=Rv0159c;logic_name=ena +Chromosome ena gene 187433 188839 . - . ID=gene:Rv0159c;Name=PE3;biotype=protein_coding;description=PE family protein PE3;gene_id=Rv0159c;logic_name=ena Chromosome ena mRNA 187433 188839 . - . ID=transcript:Rv0159c;Parent=gene:Rv0159c;Name=PE3-1;biotype=protein_coding;transcript_id=Rv0159c Chromosome ena exon 187433 188839 . - . Parent=transcript:Rv0159c;Name=Rv0159c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0159c-1;rank=1 Chromosome ena CDS 187433 188839 . - 0 ID=CDS:Rv0159c;Parent=transcript:Rv0159c;protein_id=Rv0159c ### -Chromosome ena gene 188931 190439 . - . ID=gene:Rv0160c;Name=PE4;biotype=protein_coding;description=PE family protein PE4;gene_id=Rv0160c;logic_name=ena +Chromosome ena gene 188931 190439 . - . ID=gene:Rv0160c;Name=PE4;biotype=protein_coding;description=PE family protein PE4;gene_id=Rv0160c;logic_name=ena Chromosome ena mRNA 188931 190439 . - . ID=transcript:Rv0160c;Parent=gene:Rv0160c;Name=PE4-1;biotype=protein_coding;transcript_id=Rv0160c Chromosome ena exon 188931 190439 . - . Parent=transcript:Rv0160c;Name=Rv0160c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0160c-1;rank=1 Chromosome ena CDS 188931 190439 . - 0 ID=CDS:Rv0160c;Parent=transcript:Rv0160c;protein_id=Rv0160c ### -Chromosome ena gene 190607 191956 . + . ID=gene:Rv0161;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0161;logic_name=ena +Chromosome ena gene 190607 191956 . + . ID=gene:Rv0161;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0161;logic_name=ena Chromosome ena mRNA 190607 191956 . + . ID=transcript:Rv0161;Parent=gene:Rv0161;biotype=protein_coding;transcript_id=Rv0161 Chromosome ena exon 190607 191956 . + . Parent=transcript:Rv0161;Name=Rv0161-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0161-1;rank=1 Chromosome ena CDS 190607 191956 . + 0 ID=CDS:Rv0161;Parent=transcript:Rv0161;protein_id=Rv0161 ### -Chromosome ena gene 191984 193135 . - . ID=gene:Rv0162c;Name=adhE1;biotype=protein_coding;description=Probable zinc-type alcohol dehydrogenase (E subunit) AdhE1;gene_id=Rv0162c;logic_name=ena +Chromosome ena gene 191984 193135 . - . ID=gene:Rv0162c;Name=adhE1;biotype=protein_coding;description=Probable zinc-type alcohol dehydrogenase (E subunit) AdhE1;gene_id=Rv0162c;logic_name=ena Chromosome ena mRNA 191984 193135 . - . ID=transcript:Rv0162c;Parent=gene:Rv0162c;Name=adhE1-1;biotype=protein_coding;transcript_id=Rv0162c Chromosome ena exon 191984 193135 . - . Parent=transcript:Rv0162c;Name=Rv0162c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0162c-1;rank=1 Chromosome ena CDS 191984 193135 . - 0 ID=CDS:Rv0162c;Parent=transcript:Rv0162c;protein_id=Rv0162c ### -Chromosome ena gene 193117 193572 . + . ID=gene:Rv0163;biotype=protein_coding;description=Conserved protein;gene_id=Rv0163;logic_name=ena +Chromosome ena gene 193117 193572 . + . ID=gene:Rv0163;biotype=protein_coding;description=Conserved protein;gene_id=Rv0163;logic_name=ena Chromosome ena mRNA 193117 193572 . + . ID=transcript:Rv0163;Parent=gene:Rv0163;biotype=protein_coding;transcript_id=Rv0163 Chromosome ena exon 193117 193572 . + . Parent=transcript:Rv0163;Name=Rv0163-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0163-1;rank=1 Chromosome ena CDS 193117 193572 . + 0 ID=CDS:Rv0163;Parent=transcript:Rv0163;protein_id=Rv0163 ### -Chromosome ena gene 193626 194111 . + . ID=gene:Rv0164;Name=TB18.5;biotype=protein_coding;description=Conserved protein TB18.5;gene_id=Rv0164;logic_name=ena +Chromosome ena gene 193626 194111 . + . ID=gene:Rv0164;Name=TB18.5;biotype=protein_coding;description=Conserved protein TB18.5;gene_id=Rv0164;logic_name=ena Chromosome ena mRNA 193626 194111 . + . ID=transcript:Rv0164;Parent=gene:Rv0164;Name=TB18.5-1;biotype=protein_coding;transcript_id=Rv0164 Chromosome ena exon 193626 194111 . + . Parent=transcript:Rv0164;Name=Rv0164-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0164-1;rank=1 Chromosome ena CDS 193626 194111 . + 0 ID=CDS:Rv0164;Parent=transcript:Rv0164;protein_id=Rv0164 ### -Chromosome ena gene 194144 194815 . - . ID=gene:Rv0165c;Name=mce1R;biotype=protein_coding;description=Probable transcriptional regulatory protein Mce1R (probably GntR-family);gene_id=Rv0165c;logic_name=ena +Chromosome ena gene 194144 194815 . - . ID=gene:Rv0165c;Name=mce1R;biotype=protein_coding;description=Probable transcriptional regulatory protein Mce1R (probably GntR-family);gene_id=Rv0165c;logic_name=ena Chromosome ena mRNA 194144 194815 . - . ID=transcript:Rv0165c;Parent=gene:Rv0165c;Name=mce1R-1;biotype=protein_coding;transcript_id=Rv0165c Chromosome ena exon 194144 194815 . - . Parent=transcript:Rv0165c;Name=Rv0165c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0165c-1;rank=1 Chromosome ena CDS 194144 194815 . - 0 ID=CDS:Rv0165c;Parent=transcript:Rv0165c;protein_id=Rv0165c ### -Chromosome ena gene 194993 196657 . + . ID=gene:Rv0166;Name=fadD5;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD5 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0166;logic_name=ena +Chromosome ena gene 194993 196657 . + . ID=gene:Rv0166;Name=fadD5;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD5 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0166;logic_name=ena Chromosome ena mRNA 194993 196657 . + . ID=transcript:Rv0166;Parent=gene:Rv0166;Name=fadD5-1;biotype=protein_coding;transcript_id=Rv0166 Chromosome ena exon 194993 196657 . + . Parent=transcript:Rv0166;Name=Rv0166-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0166-1;rank=1 Chromosome ena CDS 194993 196657 . + 0 ID=CDS:Rv0166;Parent=transcript:Rv0166;protein_id=Rv0166 ### -Chromosome ena gene 196861 197658 . + . ID=gene:Rv0167;Name=yrbE1A;biotype=protein_coding;description=Conserved integral membrane protein YrbE1A;gene_id=Rv0167;logic_name=ena +Chromosome ena gene 196861 197658 . + . ID=gene:Rv0167;Name=yrbE1A;biotype=protein_coding;description=Conserved integral membrane protein YrbE1A;gene_id=Rv0167;logic_name=ena Chromosome ena mRNA 196861 197658 . + . ID=transcript:Rv0167;Parent=gene:Rv0167;Name=yrbE1A-1;biotype=protein_coding;transcript_id=Rv0167 Chromosome ena exon 196861 197658 . + . Parent=transcript:Rv0167;Name=Rv0167-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0167-1;rank=1 Chromosome ena CDS 196861 197658 . + 0 ID=CDS:Rv0167;Parent=transcript:Rv0167;protein_id=Rv0167 ### -Chromosome ena gene 197660 198529 . + . ID=gene:Rv0168;Name=yrbE1B;biotype=protein_coding;description=Conserved integral membrane protein YrbE1B;gene_id=Rv0168;logic_name=ena +Chromosome ena gene 197660 198529 . + . ID=gene:Rv0168;Name=yrbE1B;biotype=protein_coding;description=Conserved integral membrane protein YrbE1B;gene_id=Rv0168;logic_name=ena Chromosome ena mRNA 197660 198529 . + . ID=transcript:Rv0168;Parent=gene:Rv0168;Name=yrbE1B-1;biotype=protein_coding;transcript_id=Rv0168 Chromosome ena exon 197660 198529 . + . Parent=transcript:Rv0168;Name=Rv0168-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0168-1;rank=1 Chromosome ena CDS 197660 198529 . + 0 ID=CDS:Rv0168;Parent=transcript:Rv0168;protein_id=Rv0168 ### -Chromosome ena gene 198534 199898 . + . ID=gene:Rv0169;Name=mce1A;biotype=protein_coding;description=Mce-family protein Mce1A;gene_id=Rv0169;logic_name=ena +Chromosome ena gene 198534 199898 . + . ID=gene:Rv0169;Name=mce1A;biotype=protein_coding;description=Mce-family protein Mce1A;gene_id=Rv0169;logic_name=ena Chromosome ena mRNA 198534 199898 . + . ID=transcript:Rv0169;Parent=gene:Rv0169;Name=mce1A-1;biotype=protein_coding;transcript_id=Rv0169 Chromosome ena exon 198534 199898 . + . Parent=transcript:Rv0169;Name=Rv0169-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0169-1;rank=1 Chromosome ena CDS 198534 199898 . + 0 ID=CDS:Rv0169;Parent=transcript:Rv0169;protein_id=Rv0169 ### -Chromosome ena gene 199895 200935 . + . ID=gene:Rv0170;Name=mce1B;biotype=protein_coding;description=Mce-family protein Mce1B;gene_id=Rv0170;logic_name=ena +Chromosome ena gene 199895 200935 . + . ID=gene:Rv0170;Name=mce1B;biotype=protein_coding;description=Mce-family protein Mce1B;gene_id=Rv0170;logic_name=ena Chromosome ena mRNA 199895 200935 . + . ID=transcript:Rv0170;Parent=gene:Rv0170;Name=mce1B-1;biotype=protein_coding;transcript_id=Rv0170 Chromosome ena exon 199895 200935 . + . Parent=transcript:Rv0170;Name=Rv0170-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0170-1;rank=1 Chromosome ena CDS 199895 200935 . + 0 ID=CDS:Rv0170;Parent=transcript:Rv0170;protein_id=Rv0170 ### -Chromosome ena gene 200932 202479 . + . ID=gene:Rv0171;Name=mce1C;biotype=protein_coding;description=Mce-family protein Mce1C;gene_id=Rv0171;logic_name=ena +Chromosome ena gene 200932 202479 . + . ID=gene:Rv0171;Name=mce1C;biotype=protein_coding;description=Mce-family protein Mce1C;gene_id=Rv0171;logic_name=ena Chromosome ena mRNA 200932 202479 . + . ID=transcript:Rv0171;Parent=gene:Rv0171;Name=mce1C-1;biotype=protein_coding;transcript_id=Rv0171 Chromosome ena exon 200932 202479 . + . Parent=transcript:Rv0171;Name=Rv0171-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0171-1;rank=1 Chromosome ena CDS 200932 202479 . + 0 ID=CDS:Rv0171;Parent=transcript:Rv0171;protein_id=Rv0171 ### -Chromosome ena gene 202476 204068 . + . ID=gene:Rv0172;Name=mce1D;biotype=protein_coding;description=Mce-family protein Mce1D;gene_id=Rv0172;logic_name=ena +Chromosome ena gene 202476 204068 . + . ID=gene:Rv0172;Name=mce1D;biotype=protein_coding;description=Mce-family protein Mce1D;gene_id=Rv0172;logic_name=ena Chromosome ena mRNA 202476 204068 . + . ID=transcript:Rv0172;Parent=gene:Rv0172;Name=mce1D-1;biotype=protein_coding;transcript_id=Rv0172 Chromosome ena exon 202476 204068 . + . Parent=transcript:Rv0172;Name=Rv0172-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0172-1;rank=1 Chromosome ena CDS 202476 204068 . + 0 ID=CDS:Rv0172;Parent=transcript:Rv0172;protein_id=Rv0172 ### -Chromosome ena gene 204065 205237 . + . ID=gene:Rv0173;Name=lprK;biotype=protein_coding;description=Possible Mce-family lipoprotein LprK (Mce-family lipoprotein Mce1E);gene_id=Rv0173;logic_name=ena +Chromosome ena gene 204065 205237 . + . ID=gene:Rv0173;Name=lprK;biotype=protein_coding;description=Possible Mce-family lipoprotein LprK (Mce-family lipoprotein Mce1E);gene_id=Rv0173;logic_name=ena Chromosome ena mRNA 204065 205237 . + . ID=transcript:Rv0173;Parent=gene:Rv0173;Name=lprK-1;biotype=protein_coding;transcript_id=Rv0173 Chromosome ena exon 204065 205237 . + . Parent=transcript:Rv0173;Name=Rv0173-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0173-1;rank=1 Chromosome ena CDS 204065 205237 . + 0 ID=CDS:Rv0173;Parent=transcript:Rv0173;protein_id=Rv0173 ### -Chromosome ena gene 205231 206778 . + . ID=gene:Rv0174;Name=mce1F;biotype=protein_coding;description=Mce-family protein Mce1F;gene_id=Rv0174;logic_name=ena +Chromosome ena gene 205231 206778 . + . ID=gene:Rv0174;Name=mce1F;biotype=protein_coding;description=Mce-family protein Mce1F;gene_id=Rv0174;logic_name=ena Chromosome ena mRNA 205231 206778 . + . ID=transcript:Rv0174;Parent=gene:Rv0174;Name=mce1F-1;biotype=protein_coding;transcript_id=Rv0174 Chromosome ena exon 205231 206778 . + . Parent=transcript:Rv0174;Name=Rv0174-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0174-1;rank=1 Chromosome ena CDS 205231 206778 . + 0 ID=CDS:Rv0174;Parent=transcript:Rv0174;protein_id=Rv0174 ### -Chromosome ena gene 206814 207455 . + . ID=gene:Rv0175;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv0175;logic_name=ena +Chromosome ena gene 206814 207455 . + . ID=gene:Rv0175;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv0175;logic_name=ena Chromosome ena mRNA 206814 207455 . + . ID=transcript:Rv0175;Parent=gene:Rv0175;biotype=protein_coding;transcript_id=Rv0175 Chromosome ena exon 206814 207455 . + . Parent=transcript:Rv0175;Name=Rv0175-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0175-1;rank=1 Chromosome ena CDS 206814 207455 . + 0 ID=CDS:Rv0175;Parent=transcript:Rv0175;protein_id=Rv0175 ### -Chromosome ena gene 207452 208420 . + . ID=gene:Rv0176;biotype=protein_coding;description=Probable conserved Mce associated transmembrane protein;gene_id=Rv0176;logic_name=ena +Chromosome ena gene 207452 208420 . + . ID=gene:Rv0176;biotype=protein_coding;description=Probable conserved Mce associated transmembrane protein;gene_id=Rv0176;logic_name=ena Chromosome ena mRNA 207452 208420 . + . ID=transcript:Rv0176;Parent=gene:Rv0176;biotype=protein_coding;transcript_id=Rv0176 Chromosome ena exon 207452 208420 . + . Parent=transcript:Rv0176;Name=Rv0176-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0176-1;rank=1 Chromosome ena CDS 207452 208420 . + 0 ID=CDS:Rv0176;Parent=transcript:Rv0176;protein_id=Rv0176 ### -Chromosome ena gene 208417 208971 . + . ID=gene:Rv0177;biotype=protein_coding;description=Probable conserved Mce associated protein;gene_id=Rv0177;logic_name=ena +Chromosome ena gene 208417 208971 . + . ID=gene:Rv0177;biotype=protein_coding;description=Probable conserved Mce associated protein;gene_id=Rv0177;logic_name=ena Chromosome ena mRNA 208417 208971 . + . ID=transcript:Rv0177;Parent=gene:Rv0177;biotype=protein_coding;transcript_id=Rv0177 Chromosome ena exon 208417 208971 . + . Parent=transcript:Rv0177;Name=Rv0177-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0177-1;rank=1 Chromosome ena CDS 208417 208971 . + 0 ID=CDS:Rv0177;Parent=transcript:Rv0177;protein_id=Rv0177 ### -Chromosome ena gene 208938 209672 . + . ID=gene:Rv0178;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv0178;logic_name=ena +Chromosome ena gene 208938 209672 . + . ID=gene:Rv0178;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv0178;logic_name=ena Chromosome ena mRNA 208938 209672 . + . ID=transcript:Rv0178;Parent=gene:Rv0178;biotype=protein_coding;transcript_id=Rv0178 Chromosome ena exon 208938 209672 . + . Parent=transcript:Rv0178;Name=Rv0178-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0178-1;rank=1 Chromosome ena CDS 208938 209672 . + 0 ID=CDS:Rv0178;Parent=transcript:Rv0178;protein_id=Rv0178 ### -Chromosome ena gene 209703 210812 . - . ID=gene:Rv0179c;Name=lprO;biotype=protein_coding;description=Possible lipoprotein LprO;gene_id=Rv0179c;logic_name=ena +Chromosome ena gene 209703 210812 . - . ID=gene:Rv0179c;Name=lprO;biotype=protein_coding;description=Possible lipoprotein LprO;gene_id=Rv0179c;logic_name=ena Chromosome ena mRNA 209703 210812 . - . ID=transcript:Rv0179c;Parent=gene:Rv0179c;Name=lprO-1;biotype=protein_coding;transcript_id=Rv0179c Chromosome ena exon 209703 210812 . - . Parent=transcript:Rv0179c;Name=Rv0179c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0179c-1;rank=1 Chromosome ena CDS 209703 210812 . - 0 ID=CDS:Rv0179c;Parent=transcript:Rv0179c;protein_id=Rv0179c ### -Chromosome ena gene 210892 212250 . - . ID=gene:Rv0180c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0180c;logic_name=ena +Chromosome ena gene 210892 212250 . - . ID=gene:Rv0180c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0180c;logic_name=ena Chromosome ena mRNA 210892 212250 . - . ID=transcript:Rv0180c;Parent=gene:Rv0180c;biotype=protein_coding;transcript_id=Rv0180c Chromosome ena exon 210892 212250 . - . Parent=transcript:Rv0180c;Name=Rv0180c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0180c-1;rank=1 Chromosome ena CDS 210892 212250 . - 0 ID=CDS:Rv0180c;Parent=transcript:Rv0180c;protein_id=Rv0180c ### -Chromosome ena gene 212277 213011 . - . ID=gene:Rv0181c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0181c;logic_name=ena +Chromosome ena gene 212277 213011 . - . ID=gene:Rv0181c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0181c;logic_name=ena Chromosome ena mRNA 212277 213011 . - . ID=transcript:Rv0181c;Parent=gene:Rv0181c;biotype=protein_coding;transcript_id=Rv0181c Chromosome ena exon 212277 213011 . - . Parent=transcript:Rv0181c;Name=Rv0181c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0181c-1;rank=1 Chromosome ena CDS 212277 213011 . - 0 ID=CDS:Rv0181c;Parent=transcript:Rv0181c;protein_id=Rv0181c ### -Chromosome ena gene 213028 214140 . - . ID=gene:Rv0182c;Name=sigG;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor);gene_id=Rv0182c;logic_name=ena +Chromosome ena gene 213028 214140 . - . ID=gene:Rv0182c;Name=sigG;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor);gene_id=Rv0182c;logic_name=ena Chromosome ena mRNA 213028 214140 . - . ID=transcript:Rv0182c;Parent=gene:Rv0182c;Name=sigG-1;biotype=protein_coding;transcript_id=Rv0182c Chromosome ena exon 213028 214140 . - . Parent=transcript:Rv0182c;Name=Rv0182c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0182c-1;rank=1 Chromosome ena CDS 213028 214140 . - 0 ID=CDS:Rv0182c;Parent=transcript:Rv0182c;protein_id=Rv0182c ### -Chromosome ena gene 214088 214927 . + . ID=gene:Rv0183;biotype=protein_coding;description=Possible lysophospholipase;gene_id=Rv0183;logic_name=ena +Chromosome ena gene 214088 214927 . + . ID=gene:Rv0183;biotype=protein_coding;description=Possible lysophospholipase;gene_id=Rv0183;logic_name=ena Chromosome ena mRNA 214088 214927 . + . ID=transcript:Rv0183;Parent=gene:Rv0183;biotype=protein_coding;transcript_id=Rv0183 Chromosome ena exon 214088 214927 . + . Parent=transcript:Rv0183;Name=Rv0183-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0183-1;rank=1 Chromosome ena CDS 214088 214927 . + 0 ID=CDS:Rv0183;Parent=transcript:Rv0183;protein_id=Rv0183 ### -Chromosome ena gene 214969 215718 . + . ID=gene:Rv0184;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0184;logic_name=ena +Chromosome ena gene 214969 215718 . + . ID=gene:Rv0184;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0184;logic_name=ena Chromosome ena mRNA 214969 215718 . + . ID=transcript:Rv0184;Parent=gene:Rv0184;biotype=protein_coding;transcript_id=Rv0184 Chromosome ena exon 214969 215718 . + . Parent=transcript:Rv0184;Name=Rv0184-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0184-1;rank=1 Chromosome ena CDS 214969 215718 . + 0 ID=CDS:Rv0184;Parent=transcript:Rv0184;protein_id=Rv0184 ### -Chromosome ena gene 215715 216224 . + . ID=gene:Rv0185;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0185;logic_name=ena +Chromosome ena gene 215715 216224 . + . ID=gene:Rv0185;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0185;logic_name=ena Chromosome ena mRNA 215715 216224 . + . ID=transcript:Rv0185;Parent=gene:Rv0185;biotype=protein_coding;transcript_id=Rv0185 Chromosome ena exon 215715 216224 . + . Parent=transcript:Rv0185;Name=Rv0185-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0185-1;rank=1 Chromosome ena CDS 215715 216224 . + 0 ID=CDS:Rv0185;Parent=transcript:Rv0185;protein_id=Rv0185 ### -Chromosome ena gene 216269 218344 . + . ID=gene:Rv0186;Name=bglS;biotype=protein_coding;description=Probable beta-glucosidase BglS (gentiobiase) (cellobiase) (beta-D-glucoside glucohydrolase);gene_id=Rv0186;logic_name=ena +Chromosome ena gene 216269 218344 . + . ID=gene:Rv0186;Name=bglS;biotype=protein_coding;description=Probable beta-glucosidase BglS (gentiobiase) (cellobiase) (beta-D-glucoside glucohydrolase);gene_id=Rv0186;logic_name=ena Chromosome ena mRNA 216269 218344 . + . ID=transcript:Rv0186;Parent=gene:Rv0186;Name=bglS-1;biotype=protein_coding;transcript_id=Rv0186 Chromosome ena exon 216269 218344 . + . Parent=transcript:Rv0186;Name=Rv0186-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0186-1;rank=1 Chromosome ena CDS 216269 218344 . + 0 ID=CDS:Rv0186;Parent=transcript:Rv0186;protein_id=Rv0186 ### -Chromosome ena gene 218390 218551 . - . ID=gene:Rv0186A;Name=mymT;biotype=protein_coding;description=Metallothionein%2C MymT;gene_id=Rv0186A;logic_name=ena +Chromosome ena gene 218390 218551 . - . ID=gene:Rv0186A;Name=mymT;biotype=protein_coding;description=Metallothionein%2C MymT;gene_id=Rv0186A;logic_name=ena Chromosome ena mRNA 218390 218551 . - . ID=transcript:Rv0186A;Parent=gene:Rv0186A;Name=mymT-1;biotype=protein_coding;transcript_id=Rv0186A Chromosome ena exon 218390 218551 . - . Parent=transcript:Rv0186A;Name=Rv0186A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0186A-1;rank=1 Chromosome ena CDS 218390 218551 . - 0 ID=CDS:Rv0186A;Parent=transcript:Rv0186A;protein_id=Rv0186A ### -Chromosome ena gene 218705 219367 . + . ID=gene:Rv0187;biotype=protein_coding;description=Probable O-methyltransferase;gene_id=Rv0187;logic_name=ena +Chromosome ena gene 218705 219367 . + . ID=gene:Rv0187;biotype=protein_coding;description=Probable O-methyltransferase;gene_id=Rv0187;logic_name=ena Chromosome ena mRNA 218705 219367 . + . ID=transcript:Rv0187;Parent=gene:Rv0187;biotype=protein_coding;transcript_id=Rv0187 Chromosome ena exon 218705 219367 . + . Parent=transcript:Rv0187;Name=Rv0187-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0187-1;rank=1 Chromosome ena CDS 218705 219367 . + 0 ID=CDS:Rv0187;Parent=transcript:Rv0187;protein_id=Rv0187 ### -Chromosome ena gene 219486 219917 . + . ID=gene:Rv0188;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0188;logic_name=ena +Chromosome ena gene 219486 219917 . + . ID=gene:Rv0188;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0188;logic_name=ena Chromosome ena mRNA 219486 219917 . + . ID=transcript:Rv0188;Parent=gene:Rv0188;biotype=protein_coding;transcript_id=Rv0188 Chromosome ena exon 219486 219917 . + . Parent=transcript:Rv0188;Name=Rv0188-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0188-1;rank=1 Chromosome ena CDS 219486 219917 . + 0 ID=CDS:Rv0188;Parent=transcript:Rv0188;protein_id=Rv0188 ### -Chromosome ena gene 219996 221723 . - . ID=gene:Rv0189c;Name=ilvD;biotype=protein_coding;description=Probable dihydroxy-acid dehydratase IlvD (dad);gene_id=Rv0189c;logic_name=ena +Chromosome ena gene 219996 221723 . - . ID=gene:Rv0189c;Name=ilvD;biotype=protein_coding;description=Probable dihydroxy-acid dehydratase IlvD (dad);gene_id=Rv0189c;logic_name=ena Chromosome ena mRNA 219996 221723 . - . ID=transcript:Rv0189c;Parent=gene:Rv0189c;Name=ilvD-1;biotype=protein_coding;transcript_id=Rv0189c Chromosome ena exon 219996 221723 . - . Parent=transcript:Rv0189c;Name=Rv0189c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0189c-1;rank=1 Chromosome ena CDS 219996 221723 . - 0 ID=CDS:Rv0189c;Parent=transcript:Rv0189c;protein_id=Rv0189c ### -Chromosome ena gene 221871 222161 . + . ID=gene:Rv0190;biotype=protein_coding;description=Conserved protein;gene_id=Rv0190;logic_name=ena +Chromosome ena gene 221871 222161 . + . ID=gene:Rv0190;biotype=protein_coding;description=Conserved protein;gene_id=Rv0190;logic_name=ena Chromosome ena mRNA 221871 222161 . + . ID=transcript:Rv0190;Parent=gene:Rv0190;biotype=protein_coding;transcript_id=Rv0190 Chromosome ena exon 221871 222161 . + . Parent=transcript:Rv0190;Name=Rv0190-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0190-1;rank=1 Chromosome ena CDS 221871 222161 . + 0 ID=CDS:Rv0190;Parent=transcript:Rv0190;protein_id=Rv0190 ### -Chromosome ena gene 222289 223530 . + . ID=gene:Rv0191;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0191;logic_name=ena +Chromosome ena gene 222289 223530 . + . ID=gene:Rv0191;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0191;logic_name=ena Chromosome ena mRNA 222289 223530 . + . ID=transcript:Rv0191;Parent=gene:Rv0191;biotype=protein_coding;transcript_id=Rv0191 Chromosome ena exon 222289 223530 . + . Parent=transcript:Rv0191;Name=Rv0191-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0191-1;rank=1 Chromosome ena CDS 222289 223530 . + 0 ID=CDS:Rv0191;Parent=transcript:Rv0191;protein_id=Rv0191 ### -Chromosome ena gene 223564 224664 . + . ID=gene:Rv0192;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0192;logic_name=ena +Chromosome ena gene 223564 224664 . + . ID=gene:Rv0192;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0192;logic_name=ena Chromosome ena mRNA 223564 224664 . + . ID=transcript:Rv0192;Parent=gene:Rv0192;biotype=protein_coding;transcript_id=Rv0192 Chromosome ena exon 223564 224664 . + . Parent=transcript:Rv0192;Name=Rv0192-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0192-1;rank=1 Chromosome ena CDS 223564 224664 . + 0 ID=CDS:Rv0192;Parent=transcript:Rv0192;protein_id=Rv0192 ### -Chromosome ena gene 223607 223909 . + . ID=gene:Rv0192A;biotype=protein_coding;description=Conserved secreted protein;gene_id=Rv0192A;logic_name=ena +Chromosome ena gene 223607 223909 . + . ID=gene:Rv0192A;biotype=protein_coding;description=Conserved secreted protein;gene_id=Rv0192A;logic_name=ena Chromosome ena mRNA 223607 223909 . + . ID=transcript:Rv0192A;Parent=gene:Rv0192A;biotype=protein_coding;transcript_id=Rv0192A Chromosome ena exon 223607 223909 . + . Parent=transcript:Rv0192A;Name=Rv0192A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0192A-1;rank=1 Chromosome ena CDS 223607 223909 . + 0 ID=CDS:Rv0192A;Parent=transcript:Rv0192A;protein_id=Rv0192A ### -Chromosome ena gene 224724 226571 . - . ID=gene:Rv0193c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0193c;logic_name=ena +Chromosome ena gene 224724 226571 . - . ID=gene:Rv0193c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0193c;logic_name=ena Chromosome ena mRNA 224724 226571 . - . ID=transcript:Rv0193c;Parent=gene:Rv0193c;biotype=protein_coding;transcript_id=Rv0193c Chromosome ena exon 224724 226571 . - . Parent=transcript:Rv0193c;Name=Rv0193c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0193c-1;rank=1 Chromosome ena CDS 224724 226571 . - 0 ID=CDS:Rv0193c;Parent=transcript:Rv0193c;protein_id=Rv0193c ### -Chromosome ena gene 226878 230462 . + . ID=gene:Rv0194;biotype=protein_coding;description=Probable transmembrane multidrug efflux pump;gene_id=Rv0194;logic_name=ena +Chromosome ena gene 226878 230462 . + . ID=gene:Rv0194;biotype=protein_coding;description=Probable transmembrane multidrug efflux pump;gene_id=Rv0194;logic_name=ena Chromosome ena mRNA 226878 230462 . + . ID=transcript:Rv0194;Parent=gene:Rv0194;biotype=protein_coding;transcript_id=Rv0194 Chromosome ena exon 226878 230462 . + . Parent=transcript:Rv0194;Name=Rv0194-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0194-1;rank=1 Chromosome ena CDS 226878 230462 . + 0 ID=CDS:Rv0194;Parent=transcript:Rv0194;protein_id=Rv0194 ### -Chromosome ena gene 230899 231534 . + . ID=gene:Rv0195;biotype=protein_coding;description=Possible two component transcriptional regulatory protein (probably LuxR-family);gene_id=Rv0195;logic_name=ena +Chromosome ena gene 230899 231534 . + . ID=gene:Rv0195;biotype=protein_coding;description=Possible two component transcriptional regulatory protein (probably LuxR-family);gene_id=Rv0195;logic_name=ena Chromosome ena mRNA 230899 231534 . + . ID=transcript:Rv0195;Parent=gene:Rv0195;biotype=protein_coding;transcript_id=Rv0195 Chromosome ena exon 230899 231534 . + . Parent=transcript:Rv0195;Name=Rv0195-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0195-1;rank=1 Chromosome ena CDS 230899 231534 . + 0 ID=CDS:Rv0195;Parent=transcript:Rv0195;protein_id=Rv0195 ### -Chromosome ena gene 231647 232231 . + . ID=gene:Rv0196;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0196;logic_name=ena +Chromosome ena gene 231647 232231 . + . ID=gene:Rv0196;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0196;logic_name=ena Chromosome ena mRNA 231647 232231 . + . ID=transcript:Rv0196;Parent=gene:Rv0196;biotype=protein_coding;transcript_id=Rv0196 Chromosome ena exon 231647 232231 . + . Parent=transcript:Rv0196;Name=Rv0196-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0196-1;rank=1 Chromosome ena CDS 231647 232231 . + 0 ID=CDS:Rv0196;Parent=transcript:Rv0196;protein_id=Rv0196 ### -Chromosome ena gene 232231 234519 . + . ID=gene:Rv0197;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0197;logic_name=ena +Chromosome ena gene 232231 234519 . + . ID=gene:Rv0197;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0197;logic_name=ena Chromosome ena mRNA 232231 234519 . + . ID=transcript:Rv0197;Parent=gene:Rv0197;biotype=protein_coding;transcript_id=Rv0197 Chromosome ena exon 232231 234519 . + . Parent=transcript:Rv0197;Name=Rv0197-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0197-1;rank=1 Chromosome ena CDS 232231 234519 . + 0 ID=CDS:Rv0197;Parent=transcript:Rv0197;protein_id=Rv0197 ### -Chromosome ena gene 234516 236507 . - . ID=gene:Rv0198c;Name=zmp1;biotype=protein_coding;description=Probable zinc metalloprotease Zmp1;gene_id=Rv0198c;logic_name=ena +Chromosome ena gene 234516 236507 . - . ID=gene:Rv0198c;Name=zmp1;biotype=protein_coding;description=Probable zinc metalloprotease Zmp1;gene_id=Rv0198c;logic_name=ena Chromosome ena mRNA 234516 236507 . - . ID=transcript:Rv0198c;Parent=gene:Rv0198c;Name=zmp1-1;biotype=protein_coding;transcript_id=Rv0198c Chromosome ena exon 234516 236507 . - . Parent=transcript:Rv0198c;Name=Rv0198c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0198c-1;rank=1 Chromosome ena CDS 234516 236507 . - 0 ID=CDS:Rv0198c;Parent=transcript:Rv0198c;protein_id=Rv0198c ### -Chromosome ena gene 236550 237209 . + . ID=gene:Rv0199;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0199;logic_name=ena +Chromosome ena gene 236550 237209 . + . ID=gene:Rv0199;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0199;logic_name=ena Chromosome ena mRNA 236550 237209 . + . ID=transcript:Rv0199;Parent=gene:Rv0199;biotype=protein_coding;transcript_id=Rv0199 Chromosome ena exon 236550 237209 . + . Parent=transcript:Rv0199;Name=Rv0199-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0199-1;rank=1 Chromosome ena CDS 236550 237209 . + 0 ID=CDS:Rv0199;Parent=transcript:Rv0199;protein_id=Rv0199 ### -Chromosome ena gene 237206 237895 . + . ID=gene:Rv0200;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0200;logic_name=ena +Chromosome ena gene 237206 237895 . + . ID=gene:Rv0200;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0200;logic_name=ena Chromosome ena mRNA 237206 237895 . + . ID=transcript:Rv0200;Parent=gene:Rv0200;biotype=protein_coding;transcript_id=Rv0200 Chromosome ena exon 237206 237895 . + . Parent=transcript:Rv0200;Name=Rv0200-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0200-1;rank=1 Chromosome ena CDS 237206 237895 . + 0 ID=CDS:Rv0200;Parent=transcript:Rv0200;protein_id=Rv0200 ### -Chromosome ena gene 237892 238395 . - . ID=gene:Rv0201c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0201c;logic_name=ena +Chromosome ena gene 237892 238395 . - . ID=gene:Rv0201c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0201c;logic_name=ena Chromosome ena mRNA 237892 238395 . - . ID=transcript:Rv0201c;Parent=gene:Rv0201c;biotype=protein_coding;transcript_id=Rv0201c Chromosome ena exon 237892 238395 . - . Parent=transcript:Rv0201c;Name=Rv0201c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0201c-1;rank=1 Chromosome ena CDS 237892 238395 . - 0 ID=CDS:Rv0201c;Parent=transcript:Rv0201c;protein_id=Rv0201c ### -Chromosome ena gene 238392 241292 . - . ID=gene:Rv0202c;Name=mmpL11;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL11;gene_id=Rv0202c;logic_name=ena +Chromosome ena gene 238392 241292 . - . ID=gene:Rv0202c;Name=mmpL11;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL11;gene_id=Rv0202c;logic_name=ena Chromosome ena mRNA 238392 241292 . - . ID=transcript:Rv0202c;Parent=gene:Rv0202c;Name=mmpL11-1;biotype=protein_coding;transcript_id=Rv0202c Chromosome ena exon 238392 241292 . - . Parent=transcript:Rv0202c;Name=Rv0202c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0202c-1;rank=1 Chromosome ena CDS 238392 241292 . - 0 ID=CDS:Rv0202c;Parent=transcript:Rv0202c;protein_id=Rv0202c ### -Chromosome ena gene 241514 241924 . + . ID=gene:Rv0203;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0203;logic_name=ena +Chromosome ena gene 241514 241924 . + . ID=gene:Rv0203;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0203;logic_name=ena Chromosome ena mRNA 241514 241924 . + . ID=transcript:Rv0203;Parent=gene:Rv0203;biotype=protein_coding;transcript_id=Rv0203 Chromosome ena exon 241514 241924 . + . Parent=transcript:Rv0203;Name=Rv0203-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0203-1;rank=1 Chromosome ena CDS 241514 241924 . + 0 ID=CDS:Rv0203;Parent=transcript:Rv0203;protein_id=Rv0203 ### -Chromosome ena gene 241976 243214 . - . ID=gene:Rv0204c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0204c;logic_name=ena +Chromosome ena gene 241976 243214 . - . ID=gene:Rv0204c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0204c;logic_name=ena Chromosome ena mRNA 241976 243214 . - . ID=transcript:Rv0204c;Parent=gene:Rv0204c;biotype=protein_coding;transcript_id=Rv0204c Chromosome ena exon 241976 243214 . - . Parent=transcript:Rv0204c;Name=Rv0204c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0204c-1;rank=1 Chromosome ena CDS 241976 243214 . - 0 ID=CDS:Rv0204c;Parent=transcript:Rv0204c;protein_id=Rv0204c ### -Chromosome ena gene 243384 244487 . + . ID=gene:Rv0205;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0205;logic_name=ena +Chromosome ena gene 243384 244487 . + . ID=gene:Rv0205;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0205;logic_name=ena Chromosome ena mRNA 243384 244487 . + . ID=transcript:Rv0205;Parent=gene:Rv0205;biotype=protein_coding;transcript_id=Rv0205 Chromosome ena exon 243384 244487 . + . Parent=transcript:Rv0205;Name=Rv0205-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0205-1;rank=1 Chromosome ena CDS 243384 244487 . + 0 ID=CDS:Rv0205;Parent=transcript:Rv0205;protein_id=Rv0205 ### -Chromosome ena gene 244484 247318 . - . ID=gene:Rv0206c;Name=mmpL3;biotype=protein_coding;description=Possible conserved transmembrane transport protein MmpL3;gene_id=Rv0206c;logic_name=ena +Chromosome ena gene 244484 247318 . - . ID=gene:Rv0206c;Name=mmpL3;biotype=protein_coding;description=Possible conserved transmembrane transport protein MmpL3;gene_id=Rv0206c;logic_name=ena Chromosome ena mRNA 244484 247318 . - . ID=transcript:Rv0206c;Parent=gene:Rv0206c;Name=mmpL3-1;biotype=protein_coding;transcript_id=Rv0206c Chromosome ena exon 244484 247318 . - . Parent=transcript:Rv0206c;Name=Rv0206c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0206c-1;rank=1 Chromosome ena CDS 244484 247318 . - 0 ID=CDS:Rv0206c;Parent=transcript:Rv0206c;protein_id=Rv0206c ### -Chromosome ena gene 247384 248112 . - . ID=gene:Rv0207c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0207c;logic_name=ena +Chromosome ena gene 247384 248112 . - . ID=gene:Rv0207c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0207c;logic_name=ena Chromosome ena mRNA 247384 248112 . - . ID=transcript:Rv0207c;Parent=gene:Rv0207c;biotype=protein_coding;transcript_id=Rv0207c Chromosome ena exon 247384 248112 . - . Parent=transcript:Rv0207c;Name=Rv0207c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0207c-1;rank=1 Chromosome ena CDS 247384 248112 . - 0 ID=CDS:Rv0207c;Parent=transcript:Rv0207c;protein_id=Rv0207c ### -Chromosome ena gene 248115 248906 . - . ID=gene:Rv0208c;biotype=protein_coding;description=Hypothetical methlytransferase (methylase);gene_id=Rv0208c;logic_name=ena +Chromosome ena gene 248115 248906 . - . ID=gene:Rv0208c;biotype=protein_coding;description=Hypothetical methlytransferase (methylase);gene_id=Rv0208c;logic_name=ena Chromosome ena mRNA 248115 248906 . - . ID=transcript:Rv0208c;Parent=gene:Rv0208c;biotype=protein_coding;transcript_id=Rv0208c Chromosome ena exon 248115 248906 . - . Parent=transcript:Rv0208c;Name=Rv0208c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0208c-1;rank=1 Chromosome ena CDS 248115 248906 . - 0 ID=CDS:Rv0208c;Parent=transcript:Rv0208c;protein_id=Rv0208c ### -Chromosome ena gene 249038 250123 . + . ID=gene:Rv0209;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0209;logic_name=ena +Chromosome ena gene 249038 250123 . + . ID=gene:Rv0209;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0209;logic_name=ena Chromosome ena mRNA 249038 250123 . + . ID=transcript:Rv0209;Parent=gene:Rv0209;biotype=protein_coding;transcript_id=Rv0209 Chromosome ena exon 249038 250123 . + . Parent=transcript:Rv0209;Name=Rv0209-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0209-1;rank=1 Chromosome ena CDS 249038 250123 . + 0 ID=CDS:Rv0209;Parent=transcript:Rv0209;protein_id=Rv0209 ### -Chromosome ena gene 250120 251598 . + . ID=gene:Rv0210;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0210;logic_name=ena +Chromosome ena gene 250120 251598 . + . ID=gene:Rv0210;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0210;logic_name=ena Chromosome ena mRNA 250120 251598 . + . ID=transcript:Rv0210;Parent=gene:Rv0210;biotype=protein_coding;transcript_id=Rv0210 Chromosome ena exon 250120 251598 . + . Parent=transcript:Rv0210;Name=Rv0210-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0210-1;rank=1 Chromosome ena CDS 250120 251598 . + 0 ID=CDS:Rv0210;Parent=transcript:Rv0210;protein_id=Rv0210 ### -Chromosome ena gene 251782 253602 . + . ID=gene:Rv0211;Name=pckA;biotype=protein_coding;description=Probable iron-regulated phosphoenolpyruvate carboxykinase [GTP] PckA (phosphoenolpyruvate carboxylase) (PEPCK)(pep carboxykinase);gene_id=Rv0211;logic_name=ena +Chromosome ena gene 251782 253602 . + . ID=gene:Rv0211;Name=pckA;biotype=protein_coding;description=Probable iron-regulated phosphoenolpyruvate carboxykinase [GTP] PckA (phosphoenolpyruvate carboxylase) (PEPCK)(pep carboxykinase);gene_id=Rv0211;logic_name=ena Chromosome ena mRNA 251782 253602 . + . ID=transcript:Rv0211;Parent=gene:Rv0211;Name=pckA-1;biotype=protein_coding;transcript_id=Rv0211 Chromosome ena exon 251782 253602 . + . Parent=transcript:Rv0211;Name=Rv0211-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0211-1;rank=1 Chromosome ena CDS 251782 253602 . + 0 ID=CDS:Rv0211;Parent=transcript:Rv0211;protein_id=Rv0211 ### -Chromosome ena gene 253669 254640 . - . ID=gene:Rv0212c;Name=nadR;biotype=protein_coding;description=Possible transcriptional regulatory protein NadR (probably AsnC-family);gene_id=Rv0212c;logic_name=ena +Chromosome ena gene 253669 254640 . - . ID=gene:Rv0212c;Name=nadR;biotype=protein_coding;description=Possible transcriptional regulatory protein NadR (probably AsnC-family);gene_id=Rv0212c;logic_name=ena Chromosome ena mRNA 253669 254640 . - . ID=transcript:Rv0212c;Parent=gene:Rv0212c;Name=nadR-1;biotype=protein_coding;transcript_id=Rv0212c Chromosome ena exon 253669 254640 . - . Parent=transcript:Rv0212c;Name=Rv0212c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0212c-1;rank=1 Chromosome ena CDS 253669 254640 . - 0 ID=CDS:Rv0212c;Parent=transcript:Rv0212c;protein_id=Rv0212c ### -Chromosome ena gene 254637 255950 . - . ID=gene:Rv0213c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv0213c;logic_name=ena +Chromosome ena gene 254637 255950 . - . ID=gene:Rv0213c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv0213c;logic_name=ena Chromosome ena mRNA 254637 255950 . - . ID=transcript:Rv0213c;Parent=gene:Rv0213c;biotype=protein_coding;transcript_id=Rv0213c Chromosome ena exon 254637 255950 . - . Parent=transcript:Rv0213c;Name=Rv0213c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0213c-1;rank=1 Chromosome ena CDS 254637 255950 . - 0 ID=CDS:Rv0213c;Parent=transcript:Rv0213c;protein_id=Rv0213c ### -Chromosome ena gene 256064 257677 . + . ID=gene:Rv0214;Name=fadD4;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD4 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0214;logic_name=ena +Chromosome ena gene 256064 257677 . + . ID=gene:Rv0214;Name=fadD4;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD4 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0214;logic_name=ena Chromosome ena mRNA 256064 257677 . + . ID=transcript:Rv0214;Parent=gene:Rv0214;Name=fadD4-1;biotype=protein_coding;transcript_id=Rv0214 Chromosome ena exon 256064 257677 . + . Parent=transcript:Rv0214;Name=Rv0214-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0214-1;rank=1 Chromosome ena CDS 256064 257677 . + 0 ID=CDS:Rv0214;Parent=transcript:Rv0214;protein_id=Rv0214 ### -Chromosome ena gene 257783 258856 . - . ID=gene:Rv0215c;Name=fadE3;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE3;gene_id=Rv0215c;logic_name=ena +Chromosome ena gene 257783 258856 . - . ID=gene:Rv0215c;Name=fadE3;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE3;gene_id=Rv0215c;logic_name=ena Chromosome ena mRNA 257783 258856 . - . ID=transcript:Rv0215c;Parent=gene:Rv0215c;Name=fadE3-1;biotype=protein_coding;transcript_id=Rv0215c Chromosome ena exon 257783 258856 . - . Parent=transcript:Rv0215c;Name=Rv0215c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0215c-1;rank=1 Chromosome ena CDS 257783 258856 . - 0 ID=CDS:Rv0215c;Parent=transcript:Rv0215c;protein_id=Rv0215c ### -Chromosome ena gene 258913 259926 . + . ID=gene:Rv0216;biotype=protein_coding;description=Double hotdog hydratase;gene_id=Rv0216;logic_name=ena +Chromosome ena gene 258913 259926 . + . ID=gene:Rv0216;biotype=protein_coding;description=Double hotdog hydratase;gene_id=Rv0216;logic_name=ena Chromosome ena mRNA 258913 259926 . + . ID=transcript:Rv0216;Parent=gene:Rv0216;biotype=protein_coding;transcript_id=Rv0216 Chromosome ena exon 258913 259926 . + . Parent=transcript:Rv0216;Name=Rv0216-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0216-1;rank=1 Chromosome ena CDS 258913 259926 . + 0 ID=CDS:Rv0216;Parent=transcript:Rv0216;protein_id=Rv0216 ### -Chromosome ena gene 259923 260831 . - . ID=gene:Rv0217c;Name=lipW;biotype=protein_coding;description=Possible esterase LipW;gene_id=Rv0217c;logic_name=ena +Chromosome ena gene 259923 260831 . - . ID=gene:Rv0217c;Name=lipW;biotype=protein_coding;description=Possible esterase LipW;gene_id=Rv0217c;logic_name=ena Chromosome ena mRNA 259923 260831 . - . ID=transcript:Rv0217c;Parent=gene:Rv0217c;Name=lipW-1;biotype=protein_coding;transcript_id=Rv0217c Chromosome ena exon 259923 260831 . - . Parent=transcript:Rv0217c;Name=Rv0217c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0217c-1;rank=1 Chromosome ena CDS 259923 260831 . - 0 ID=CDS:Rv0217c;Parent=transcript:Rv0217c;protein_id=Rv0217c ### -Chromosome ena gene 260924 262252 . + . ID=gene:Rv0218;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0218;logic_name=ena +Chromosome ena gene 260924 262252 . + . ID=gene:Rv0218;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0218;logic_name=ena Chromosome ena mRNA 260924 262252 . + . ID=transcript:Rv0218;Parent=gene:Rv0218;biotype=protein_coding;transcript_id=Rv0218 Chromosome ena exon 260924 262252 . + . Parent=transcript:Rv0218;Name=Rv0218-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0218-1;rank=1 Chromosome ena CDS 260924 262252 . + 0 ID=CDS:Rv0218;Parent=transcript:Rv0218;protein_id=Rv0218 ### -Chromosome ena gene 262254 262802 . + . ID=gene:Rv0219;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0219;logic_name=ena +Chromosome ena gene 262254 262802 . + . ID=gene:Rv0219;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0219;logic_name=ena Chromosome ena mRNA 262254 262802 . + . ID=transcript:Rv0219;Parent=gene:Rv0219;biotype=protein_coding;transcript_id=Rv0219 Chromosome ena exon 262254 262802 . + . Parent=transcript:Rv0219;Name=Rv0219-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0219-1;rank=1 Chromosome ena CDS 262254 262802 . + 0 ID=CDS:Rv0219;Parent=transcript:Rv0219;protein_id=Rv0219 ### -Chromosome ena gene 262812 264023 . + . ID=gene:Rv0220;Name=lipC;biotype=protein_coding;description=Probable esterase LipC;gene_id=Rv0220;logic_name=ena +Chromosome ena gene 262812 264023 . + . ID=gene:Rv0220;Name=lipC;biotype=protein_coding;description=Probable esterase LipC;gene_id=Rv0220;logic_name=ena Chromosome ena mRNA 262812 264023 . + . ID=transcript:Rv0220;Parent=gene:Rv0220;Name=lipC-1;biotype=protein_coding;transcript_id=Rv0220 Chromosome ena exon 262812 264023 . + . Parent=transcript:Rv0220;Name=Rv0220-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0220-1;rank=1 Chromosome ena CDS 262812 264023 . + 0 ID=CDS:Rv0220;Parent=transcript:Rv0220;protein_id=Rv0220 ### -Chromosome ena gene 264067 265476 . + . ID=gene:Rv0221;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv0221;logic_name=ena +Chromosome ena gene 264067 265476 . + . ID=gene:Rv0221;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv0221;logic_name=ena Chromosome ena mRNA 264067 265476 . + . ID=transcript:Rv0221;Parent=gene:Rv0221;biotype=protein_coding;transcript_id=Rv0221 Chromosome ena exon 264067 265476 . + . Parent=transcript:Rv0221;Name=Rv0221-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0221-1;rank=1 Chromosome ena CDS 264067 265476 . + 0 ID=CDS:Rv0221;Parent=transcript:Rv0221;protein_id=Rv0221 ### -Chromosome ena gene 265507 266295 . + . ID=gene:Rv0222;Name=echA1;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0222;logic_name=ena +Chromosome ena gene 265507 266295 . + . ID=gene:Rv0222;Name=echA1;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0222;logic_name=ena Chromosome ena mRNA 265507 266295 . + . ID=transcript:Rv0222;Parent=gene:Rv0222;Name=echA1-1;biotype=protein_coding;transcript_id=Rv0222 Chromosome ena exon 265507 266295 . + . Parent=transcript:Rv0222;Name=Rv0222-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0222-1;rank=1 Chromosome ena CDS 265507 266295 . + 0 ID=CDS:Rv0222;Parent=transcript:Rv0222;protein_id=Rv0222 ### -Chromosome ena gene 266301 267764 . - . ID=gene:Rv0223c;biotype=protein_coding;description=Probable aldehyde dehydrogenase;gene_id=Rv0223c;logic_name=ena +Chromosome ena gene 266301 267764 . - . ID=gene:Rv0223c;biotype=protein_coding;description=Probable aldehyde dehydrogenase;gene_id=Rv0223c;logic_name=ena Chromosome ena mRNA 266301 267764 . - . ID=transcript:Rv0223c;Parent=gene:Rv0223c;biotype=protein_coding;transcript_id=Rv0223c Chromosome ena exon 266301 267764 . - . Parent=transcript:Rv0223c;Name=Rv0223c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0223c-1;rank=1 Chromosome ena CDS 266301 267764 . - 0 ID=CDS:Rv0223c;Parent=transcript:Rv0223c;protein_id=Rv0223c ### -Chromosome ena gene 267863 268627 . - . ID=gene:Rv0224c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv0224c;logic_name=ena +Chromosome ena gene 267863 268627 . - . ID=gene:Rv0224c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv0224c;logic_name=ena Chromosome ena mRNA 267863 268627 . - . ID=transcript:Rv0224c;Parent=gene:Rv0224c;biotype=protein_coding;transcript_id=Rv0224c Chromosome ena exon 267863 268627 . - . Parent=transcript:Rv0224c;Name=Rv0224c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0224c-1;rank=1 Chromosome ena CDS 267863 268627 . - 0 ID=CDS:Rv0224c;Parent=transcript:Rv0224c;protein_id=Rv0224c ### -Chromosome ena gene 268663 269817 . + . ID=gene:Rv0225;biotype=protein_coding;description=Possible conserved protein;gene_id=Rv0225;logic_name=ena +Chromosome ena gene 268663 269817 . + . ID=gene:Rv0225;biotype=protein_coding;description=Possible conserved protein;gene_id=Rv0225;logic_name=ena Chromosome ena mRNA 268663 269817 . + . ID=transcript:Rv0225;Parent=gene:Rv0225;biotype=protein_coding;transcript_id=Rv0225 Chromosome ena exon 268663 269817 . + . Parent=transcript:Rv0225;Name=Rv0225-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0225-1;rank=1 Chromosome ena CDS 268663 269817 . + 0 ID=CDS:Rv0225;Parent=transcript:Rv0225;protein_id=Rv0225 ### -Chromosome ena gene 269834 271564 . - . ID=gene:Rv0226c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0226c;logic_name=ena +Chromosome ena gene 269834 271564 . - . ID=gene:Rv0226c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0226c;logic_name=ena Chromosome ena mRNA 269834 271564 . - . ID=transcript:Rv0226c;Parent=gene:Rv0226c;biotype=protein_coding;transcript_id=Rv0226c Chromosome ena exon 269834 271564 . - . Parent=transcript:Rv0226c;Name=Rv0226c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0226c-1;rank=1 Chromosome ena CDS 269834 271564 . - 0 ID=CDS:Rv0226c;Parent=transcript:Rv0226c;protein_id=Rv0226c ### -Chromosome ena gene 271574 272839 . - . ID=gene:Rv0227c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0227c;logic_name=ena +Chromosome ena gene 271574 272839 . - . ID=gene:Rv0227c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0227c;logic_name=ena Chromosome ena mRNA 271574 272839 . - . ID=transcript:Rv0227c;Parent=gene:Rv0227c;biotype=protein_coding;transcript_id=Rv0227c Chromosome ena exon 271574 272839 . - . Parent=transcript:Rv0227c;Name=Rv0227c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0227c-1;rank=1 Chromosome ena CDS 271574 272839 . - 0 ID=CDS:Rv0227c;Parent=transcript:Rv0227c;protein_id=Rv0227c ### -Chromosome ena gene 273055 274278 . + . ID=gene:Rv0228;biotype=protein_coding;description=Probable integral membrane acyltransferase;gene_id=Rv0228;logic_name=ena +Chromosome ena gene 273055 274278 . + . ID=gene:Rv0228;biotype=protein_coding;description=Probable integral membrane acyltransferase;gene_id=Rv0228;logic_name=ena Chromosome ena mRNA 273055 274278 . + . ID=transcript:Rv0228;Parent=gene:Rv0228;biotype=protein_coding;transcript_id=Rv0228 Chromosome ena exon 273055 274278 . + . Parent=transcript:Rv0228;Name=Rv0228-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0228-1;rank=1 Chromosome ena CDS 273055 274278 . + 0 ID=CDS:Rv0228;Parent=transcript:Rv0228;protein_id=Rv0228 ### -Chromosome ena gene 274306 274986 . - . ID=gene:Rv0229c;biotype=protein_coding;description=Possible conserved membrane protein with PIN domain;gene_id=Rv0229c;logic_name=ena +Chromosome ena gene 274306 274986 . - . ID=gene:Rv0229c;biotype=protein_coding;description=Possible conserved membrane protein with PIN domain;gene_id=Rv0229c;logic_name=ena Chromosome ena mRNA 274306 274986 . - . ID=transcript:Rv0229c;Parent=gene:Rv0229c;biotype=protein_coding;transcript_id=Rv0229c Chromosome ena exon 274306 274986 . - . Parent=transcript:Rv0229c;Name=Rv0229c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0229c-1;rank=1 Chromosome ena CDS 274306 274986 . - 0 ID=CDS:Rv0229c;Parent=transcript:Rv0229c;protein_id=Rv0229c ### -Chromosome ena gene 274983 275963 . - . ID=gene:Rv0230c;Name=php;biotype=protein_coding;description=Probable phosphotriesterase Php (parathion hydrolase) (PTE) (aryldialkylphosphatase) (paraoxonase) (a-esterase) (aryltriphosphatase) (paraoxon hydrolase);gene_id=Rv0230c;logic_name=ena +Chromosome ena gene 274983 275963 . - . ID=gene:Rv0230c;Name=php;biotype=protein_coding;description=Probable phosphotriesterase Php (parathion hydrolase) (PTE) (aryldialkylphosphatase) (paraoxonase) (a-esterase) (aryltriphosphatase) (paraoxon hydrolase);gene_id=Rv0230c;logic_name=ena Chromosome ena mRNA 274983 275963 . - . ID=transcript:Rv0230c;Parent=gene:Rv0230c;Name=php-1;biotype=protein_coding;transcript_id=Rv0230c Chromosome ena exon 274983 275963 . - . Parent=transcript:Rv0230c;Name=Rv0230c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0230c-1;rank=1 Chromosome ena CDS 274983 275963 . - 0 ID=CDS:Rv0230c;Parent=transcript:Rv0230c;protein_id=Rv0230c ### -Chromosome ena gene 276058 277764 . + . ID=gene:Rv0231;Name=fadE4;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE4;gene_id=Rv0231;logic_name=ena +Chromosome ena gene 276058 277764 . + . ID=gene:Rv0231;Name=fadE4;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE4;gene_id=Rv0231;logic_name=ena Chromosome ena mRNA 276058 277764 . + . ID=transcript:Rv0231;Parent=gene:Rv0231;Name=fadE4-1;biotype=protein_coding;transcript_id=Rv0231 Chromosome ena exon 276058 277764 . + . Parent=transcript:Rv0231;Name=Rv0231-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0231-1;rank=1 Chromosome ena CDS 276058 277764 . + 0 ID=CDS:Rv0231;Parent=transcript:Rv0231;protein_id=Rv0231 ### -Chromosome ena gene 277899 278588 . + . ID=gene:Rv0232;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv0232;logic_name=ena +Chromosome ena gene 277899 278588 . + . ID=gene:Rv0232;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv0232;logic_name=ena Chromosome ena mRNA 277899 278588 . + . ID=transcript:Rv0232;Parent=gene:Rv0232;biotype=protein_coding;transcript_id=Rv0232 Chromosome ena exon 277899 278588 . + . Parent=transcript:Rv0232;Name=Rv0232-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0232-1;rank=1 Chromosome ena CDS 277899 278588 . + 0 ID=CDS:Rv0232;Parent=transcript:Rv0232;protein_id=Rv0232 ### -Chromosome ena gene 278585 279529 . + . ID=gene:Rv0233;Name=nrdB;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdB (ribonucleotide reductase small chain);gene_id=Rv0233;logic_name=ena +Chromosome ena gene 278585 279529 . + . ID=gene:Rv0233;Name=nrdB;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdB (ribonucleotide reductase small chain);gene_id=Rv0233;logic_name=ena Chromosome ena mRNA 278585 279529 . + . ID=transcript:Rv0233;Parent=gene:Rv0233;Name=nrdB-1;biotype=protein_coding;transcript_id=Rv0233 Chromosome ena exon 278585 279529 . + . Parent=transcript:Rv0233;Name=Rv0233-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0233-1;rank=1 Chromosome ena CDS 278585 279529 . + 0 ID=CDS:Rv0233;Parent=transcript:Rv0233;protein_id=Rv0233 ### -Chromosome ena gene 279605 281140 . - . ID=gene:Rv0234c;Name=gabD1;biotype=protein_coding;description=Succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD1;gene_id=Rv0234c;logic_name=ena +Chromosome ena gene 279605 281140 . - . ID=gene:Rv0234c;Name=gabD1;biotype=protein_coding;description=Succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD1;gene_id=Rv0234c;logic_name=ena Chromosome ena mRNA 279605 281140 . - . ID=transcript:Rv0234c;Parent=gene:Rv0234c;Name=gabD1-1;biotype=protein_coding;transcript_id=Rv0234c Chromosome ena exon 279605 281140 . - . Parent=transcript:Rv0234c;Name=Rv0234c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0234c-1;rank=1 Chromosome ena CDS 279605 281140 . - 0 ID=CDS:Rv0234c;Parent=transcript:Rv0234c;protein_id=Rv0234c ### -Chromosome ena gene 281166 282614 . - . ID=gene:Rv0235c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0235c;logic_name=ena +Chromosome ena gene 281166 282614 . - . ID=gene:Rv0235c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0235c;logic_name=ena Chromosome ena mRNA 281166 282614 . - . ID=transcript:Rv0235c;Parent=gene:Rv0235c;biotype=protein_coding;transcript_id=Rv0235c Chromosome ena exon 281166 282614 . - . Parent=transcript:Rv0235c;Name=Rv0235c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0235c-1;rank=1 Chromosome ena CDS 281166 282614 . - 0 ID=CDS:Rv0235c;Parent=transcript:Rv0235c;protein_id=Rv0235c ### -Chromosome ena gene 282649 286851 . - . ID=gene:Rv0236c;Name=aftD;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftD;gene_id=Rv0236c;logic_name=ena +Chromosome ena gene 282649 286851 . - . ID=gene:Rv0236c;Name=aftD;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftD;gene_id=Rv0236c;logic_name=ena Chromosome ena mRNA 282649 286851 . - . ID=transcript:Rv0236c;Parent=gene:Rv0236c;Name=aftD-1;biotype=protein_coding;transcript_id=Rv0236c Chromosome ena exon 282649 286851 . - . Parent=transcript:Rv0236c;Name=Rv0236c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0236c-1;rank=1 Chromosome ena CDS 282649 286851 . - 0 ID=CDS:Rv0236c;Parent=transcript:Rv0236c;protein_id=Rv0236c ### -Chromosome ena gene 286898 287071 . - . ID=gene:Rv0236A;biotype=protein_coding;description=Small secreted protein;gene_id=Rv0236A;logic_name=ena +Chromosome ena gene 286898 287071 . - . ID=gene:Rv0236A;biotype=protein_coding;description=Small secreted protein;gene_id=Rv0236A;logic_name=ena Chromosome ena mRNA 286898 287071 . - . ID=transcript:Rv0236A;Parent=gene:Rv0236A;biotype=protein_coding;transcript_id=Rv0236A Chromosome ena exon 286898 287071 . - . Parent=transcript:Rv0236A;Name=Rv0236A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0236A-1;rank=1 Chromosome ena CDS 286898 287071 . - 0 ID=CDS:Rv0236A;Parent=transcript:Rv0236A;protein_id=Rv0236A ### -Chromosome ena gene 287186 288352 . + . ID=gene:Rv0237;Name=lpqI;biotype=protein_coding;description=Probable conserved lipoprotein LpqI;gene_id=Rv0237;logic_name=ena +Chromosome ena gene 287186 288352 . + . ID=gene:Rv0237;Name=lpqI;biotype=protein_coding;description=Probable conserved lipoprotein LpqI;gene_id=Rv0237;logic_name=ena Chromosome ena mRNA 287186 288352 . + . ID=transcript:Rv0237;Parent=gene:Rv0237;Name=lpqI-1;biotype=protein_coding;transcript_id=Rv0237 Chromosome ena exon 287186 288352 . + . Parent=transcript:Rv0237;Name=Rv0237-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0237-1;rank=1 Chromosome ena CDS 287186 288352 . + 0 ID=CDS:Rv0237;Parent=transcript:Rv0237;protein_id=Rv0237 ### -Chromosome ena gene 288428 289042 . + . ID=gene:Rv0238;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv0238;logic_name=ena +Chromosome ena gene 288428 289042 . + . ID=gene:Rv0238;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv0238;logic_name=ena Chromosome ena mRNA 288428 289042 . + . ID=transcript:Rv0238;Parent=gene:Rv0238;biotype=protein_coding;transcript_id=Rv0238 Chromosome ena exon 288428 289042 . + . Parent=transcript:Rv0238;Name=Rv0238-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0238-1;rank=1 Chromosome ena CDS 288428 289042 . + 0 ID=CDS:Rv0238;Parent=transcript:Rv0238;protein_id=Rv0238 ### -Chromosome ena gene 289104 289337 . + . ID=gene:Rv0239;Name=vapB24;biotype=protein_coding;description=Possible antitoxin VapB24;gene_id=Rv0239;logic_name=ena +Chromosome ena gene 289104 289337 . + . ID=gene:Rv0239;Name=vapB24;biotype=protein_coding;description=Possible antitoxin VapB24;gene_id=Rv0239;logic_name=ena Chromosome ena mRNA 289104 289337 . + . ID=transcript:Rv0239;Parent=gene:Rv0239;Name=vapB24-1;biotype=protein_coding;transcript_id=Rv0239 Chromosome ena exon 289104 289337 . + . Parent=transcript:Rv0239;Name=Rv0239-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0239-1;rank=1 Chromosome ena CDS 289104 289337 . + 0 ID=CDS:Rv0239;Parent=transcript:Rv0239;protein_id=Rv0239 ### -Chromosome ena gene 289345 289782 . + . ID=gene:Rv0240;Name=vapC24;biotype=protein_coding;description=Possible toxin VapC24. Contains PIN domain.;gene_id=Rv0240;logic_name=ena +Chromosome ena gene 289345 289782 . + . ID=gene:Rv0240;Name=vapC24;biotype=protein_coding;description=Possible toxin VapC24. Contains PIN domain.;gene_id=Rv0240;logic_name=ena Chromosome ena mRNA 289345 289782 . + . ID=transcript:Rv0240;Parent=gene:Rv0240;Name=vapC24-1;biotype=protein_coding;transcript_id=Rv0240 Chromosome ena exon 289345 289782 . + . Parent=transcript:Rv0240;Name=Rv0240-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0240-1;rank=1 Chromosome ena CDS 289345 289782 . + 0 ID=CDS:Rv0240;Parent=transcript:Rv0240;protein_id=Rv0240 ### -Chromosome ena gene 289812 290654 . - . ID=gene:Rv0241c;Name=htdX;biotype=protein_coding;description=Probable 3-hydroxyacyl-thioester dehydratase HtdX;gene_id=Rv0241c;logic_name=ena +Chromosome ena gene 289812 290654 . - . ID=gene:Rv0241c;Name=htdX;biotype=protein_coding;description=Probable 3-hydroxyacyl-thioester dehydratase HtdX;gene_id=Rv0241c;logic_name=ena Chromosome ena mRNA 289812 290654 . - . ID=transcript:Rv0241c;Parent=gene:Rv0241c;Name=htdX-1;biotype=protein_coding;transcript_id=Rv0241c Chromosome ena exon 289812 290654 . - . Parent=transcript:Rv0241c;Name=Rv0241c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0241c-1;rank=1 Chromosome ena CDS 289812 290654 . - 0 ID=CDS:Rv0241c;Parent=transcript:Rv0241c;protein_id=Rv0241c ### -Chromosome ena gene 290665 292029 . - . ID=gene:Rv0242c;Name=fabG4;biotype=protein_coding;description=Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG4 (3-ketoacyl-acyl carrier protein reductase);gene_id=Rv0242c;logic_name=ena +Chromosome ena gene 290665 292029 . - . ID=gene:Rv0242c;Name=fabG4;biotype=protein_coding;description=Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG4 (3-ketoacyl-acyl carrier protein reductase);gene_id=Rv0242c;logic_name=ena Chromosome ena mRNA 290665 292029 . - . ID=transcript:Rv0242c;Parent=gene:Rv0242c;Name=fabG4-1;biotype=protein_coding;transcript_id=Rv0242c Chromosome ena exon 290665 292029 . - . Parent=transcript:Rv0242c;Name=Rv0242c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0242c-1;rank=1 Chromosome ena CDS 290665 292029 . - 0 ID=CDS:Rv0242c;Parent=transcript:Rv0242c;protein_id=Rv0242c ### -Chromosome ena gene 292171 293493 . + . ID=gene:Rv0243;Name=fadA2;biotype=protein_coding;description=Probable acetyl-CoA acyltransferase FadA2 (3-ketoacyl-CoA thiolase) (beta-ketothiolase);gene_id=Rv0243;logic_name=ena +Chromosome ena gene 292171 293493 . + . ID=gene:Rv0243;Name=fadA2;biotype=protein_coding;description=Probable acetyl-CoA acyltransferase FadA2 (3-ketoacyl-CoA thiolase) (beta-ketothiolase);gene_id=Rv0243;logic_name=ena Chromosome ena mRNA 292171 293493 . + . ID=transcript:Rv0243;Parent=gene:Rv0243;Name=fadA2-1;biotype=protein_coding;transcript_id=Rv0243 Chromosome ena exon 292171 293493 . + . Parent=transcript:Rv0243;Name=Rv0243-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0243-1;rank=1 Chromosome ena CDS 292171 293493 . + 0 ID=CDS:Rv0243;Parent=transcript:Rv0243;protein_id=Rv0243 @@ -1277,376 +1277,376 @@ Chromosome ena transcript 293604 293705 . + . ID=transcript:EBG00000313378;Paren Chromosome ena exon 293604 293705 . + . Parent=transcript:EBG00000313378;Name=EBG00000313378;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313378;rank=1 ### Chromosome ena_gene biological_region 293604 293705 . + . external_name=AL123456.3:gene:293604..293705;logic_name=ena_gene -Chromosome ena gene 293798 295633 . - . ID=gene:Rv0244c;Name=fadE5;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE5;gene_id=Rv0244c;logic_name=ena +Chromosome ena gene 293798 295633 . - . ID=gene:Rv0244c;Name=fadE5;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE5;gene_id=Rv0244c;logic_name=ena Chromosome ena mRNA 293798 295633 . - . ID=transcript:Rv0244c;Parent=gene:Rv0244c;Name=fadE5-1;biotype=protein_coding;transcript_id=Rv0244c Chromosome ena exon 293798 295633 . - . Parent=transcript:Rv0244c;Name=Rv0244c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0244c-1;rank=1 Chromosome ena CDS 293798 295633 . - 0 ID=CDS:Rv0244c;Parent=transcript:Rv0244c;protein_id=Rv0244c ### -Chromosome ena gene 296005 296493 . + . ID=gene:Rv0245;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0245;logic_name=ena +Chromosome ena gene 296005 296493 . + . ID=gene:Rv0245;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0245;logic_name=ena Chromosome ena mRNA 296005 296493 . + . ID=transcript:Rv0245;Parent=gene:Rv0245;biotype=protein_coding;transcript_id=Rv0245 Chromosome ena exon 296005 296493 . + . Parent=transcript:Rv0245;Name=Rv0245-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0245-1;rank=1 Chromosome ena CDS 296005 296493 . + 0 ID=CDS:Rv0245;Parent=transcript:Rv0245;protein_id=Rv0245 ### -Chromosome ena gene 296809 298119 . + . ID=gene:Rv0246;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0246;logic_name=ena +Chromosome ena gene 296809 298119 . + . ID=gene:Rv0246;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0246;logic_name=ena Chromosome ena mRNA 296809 298119 . + . ID=transcript:Rv0246;Parent=gene:Rv0246;biotype=protein_coding;transcript_id=Rv0246 Chromosome ena exon 296809 298119 . + . Parent=transcript:Rv0246;Name=Rv0246-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0246-1;rank=1 Chromosome ena CDS 296809 298119 . + 0 ID=CDS:Rv0246;Parent=transcript:Rv0246;protein_id=Rv0246 ### -Chromosome ena gene 298116 298862 . - . ID=gene:Rv0247c;biotype=protein_coding;description=Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase);gene_id=Rv0247c;logic_name=ena +Chromosome ena gene 298116 298862 . - . ID=gene:Rv0247c;biotype=protein_coding;description=Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase);gene_id=Rv0247c;logic_name=ena Chromosome ena mRNA 298116 298862 . - . ID=transcript:Rv0247c;Parent=gene:Rv0247c;biotype=protein_coding;transcript_id=Rv0247c Chromosome ena exon 298116 298862 . - . Parent=transcript:Rv0247c;Name=Rv0247c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0247c-1;rank=1 Chromosome ena CDS 298116 298862 . - 0 ID=CDS:Rv0247c;Parent=transcript:Rv0247c;protein_id=Rv0247c ### -Chromosome ena gene 298863 300803 . - . ID=gene:Rv0248c;biotype=protein_coding;description=Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase);gene_id=Rv0248c;logic_name=ena +Chromosome ena gene 298863 300803 . - . ID=gene:Rv0248c;biotype=protein_coding;description=Probable succinate dehydrogenase [iron-sulfur subunit] (succinic dehydrogenase);gene_id=Rv0248c;logic_name=ena Chromosome ena mRNA 298863 300803 . - . ID=transcript:Rv0248c;Parent=gene:Rv0248c;biotype=protein_coding;transcript_id=Rv0248c Chromosome ena exon 298863 300803 . - . Parent=transcript:Rv0248c;Name=Rv0248c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0248c-1;rank=1 Chromosome ena CDS 298863 300803 . - 0 ID=CDS:Rv0248c;Parent=transcript:Rv0248c;protein_id=Rv0248c ### -Chromosome ena gene 300834 301655 . - . ID=gene:Rv0249c;biotype=protein_coding;description=Probable succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase);gene_id=Rv0249c;logic_name=ena +Chromosome ena gene 300834 301655 . - . ID=gene:Rv0249c;biotype=protein_coding;description=Probable succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase);gene_id=Rv0249c;logic_name=ena Chromosome ena mRNA 300834 301655 . - . ID=transcript:Rv0249c;Parent=gene:Rv0249c;biotype=protein_coding;transcript_id=Rv0249c Chromosome ena exon 300834 301655 . - . Parent=transcript:Rv0249c;Name=Rv0249c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0249c-1;rank=1 Chromosome ena CDS 300834 301655 . - 0 ID=CDS:Rv0249c;Parent=transcript:Rv0249c;protein_id=Rv0249c ### -Chromosome ena gene 301735 302028 . - . ID=gene:Rv0250c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0250c;logic_name=ena +Chromosome ena gene 301735 302028 . - . ID=gene:Rv0250c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0250c;logic_name=ena Chromosome ena mRNA 301735 302028 . - . ID=transcript:Rv0250c;Parent=gene:Rv0250c;biotype=protein_coding;transcript_id=Rv0250c Chromosome ena exon 301735 302028 . - . Parent=transcript:Rv0250c;Name=Rv0250c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0250c-1;rank=1 Chromosome ena CDS 301735 302028 . - 0 ID=CDS:Rv0250c;Parent=transcript:Rv0250c;protein_id=Rv0250c ### -Chromosome ena gene 302173 302652 . - . ID=gene:Rv0251c;Name=hsp;biotype=protein_coding;description=Heat shock protein Hsp (heat-stress-induced ribosome-binding protein A);gene_id=Rv0251c;logic_name=ena +Chromosome ena gene 302173 302652 . - . ID=gene:Rv0251c;Name=hsp;biotype=protein_coding;description=Heat shock protein Hsp (heat-stress-induced ribosome-binding protein A);gene_id=Rv0251c;logic_name=ena Chromosome ena mRNA 302173 302652 . - . ID=transcript:Rv0251c;Parent=gene:Rv0251c;Name=hsp-1;biotype=protein_coding;transcript_id=Rv0251c Chromosome ena exon 302173 302652 . - . Parent=transcript:Rv0251c;Name=Rv0251c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0251c-1;rank=1 Chromosome ena CDS 302173 302652 . - 0 ID=CDS:Rv0251c;Parent=transcript:Rv0251c;protein_id=Rv0251c ### -Chromosome ena gene 302866 305427 . + . ID=gene:Rv0252;Name=nirB;biotype=protein_coding;description=Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB;gene_id=Rv0252;logic_name=ena +Chromosome ena gene 302866 305427 . + . ID=gene:Rv0252;Name=nirB;biotype=protein_coding;description=Probable nitrite reductase [NAD(P)H] large subunit [FAD flavoprotein] NirB;gene_id=Rv0252;logic_name=ena Chromosome ena mRNA 302866 305427 . + . ID=transcript:Rv0252;Parent=gene:Rv0252;Name=nirB-1;biotype=protein_coding;transcript_id=Rv0252 Chromosome ena exon 302866 305427 . + . Parent=transcript:Rv0252;Name=Rv0252-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0252-1;rank=1 Chromosome ena CDS 302866 305427 . + 0 ID=CDS:Rv0252;Parent=transcript:Rv0252;protein_id=Rv0252 ### -Chromosome ena gene 305453 305809 . + . ID=gene:Rv0253;Name=nirD;biotype=protein_coding;description=Probable nitrite reductase [NAD(P)H] small subunit NirD;gene_id=Rv0253;logic_name=ena +Chromosome ena gene 305453 305809 . + . ID=gene:Rv0253;Name=nirD;biotype=protein_coding;description=Probable nitrite reductase [NAD(P)H] small subunit NirD;gene_id=Rv0253;logic_name=ena Chromosome ena mRNA 305453 305809 . + . ID=transcript:Rv0253;Parent=gene:Rv0253;Name=nirD-1;biotype=protein_coding;transcript_id=Rv0253 Chromosome ena exon 305453 305809 . + . Parent=transcript:Rv0253;Name=Rv0253-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0253-1;rank=1 Chromosome ena CDS 305453 305809 . + 0 ID=CDS:Rv0253;Parent=transcript:Rv0253;protein_id=Rv0253 ### -Chromosome ena gene 305825 306349 . - . ID=gene:Rv0254c;Name=cobU;biotype=protein_coding;description=Probable bifunctional cobalamin biosynthesis protein CobU: cobinamide kinase + cobinamide phosphate guanylyltransferase;gene_id=Rv0254c;logic_name=ena +Chromosome ena gene 305825 306349 . - . ID=gene:Rv0254c;Name=cobU;biotype=protein_coding;description=Probable bifunctional cobalamin biosynthesis protein CobU: cobinamide kinase + cobinamide phosphate guanylyltransferase;gene_id=Rv0254c;logic_name=ena Chromosome ena mRNA 305825 306349 . - . ID=transcript:Rv0254c;Parent=gene:Rv0254c;Name=cobU-1;biotype=protein_coding;transcript_id=Rv0254c Chromosome ena exon 305825 306349 . - . Parent=transcript:Rv0254c;Name=Rv0254c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0254c-1;rank=1 Chromosome ena CDS 305825 306349 . - 0 ID=CDS:Rv0254c;Parent=transcript:Rv0254c;protein_id=Rv0254c ### -Chromosome ena gene 306374 307858 . - . ID=gene:Rv0255c;Name=cobQ1;biotype=protein_coding;description=Probable cobyric acid synthase CobQ1;gene_id=Rv0255c;logic_name=ena +Chromosome ena gene 306374 307858 . - . ID=gene:Rv0255c;Name=cobQ1;biotype=protein_coding;description=Probable cobyric acid synthase CobQ1;gene_id=Rv0255c;logic_name=ena Chromosome ena mRNA 306374 307858 . - . ID=transcript:Rv0255c;Parent=gene:Rv0255c;Name=cobQ1-1;biotype=protein_coding;transcript_id=Rv0255c Chromosome ena exon 306374 307858 . - . Parent=transcript:Rv0255c;Name=Rv0255c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0255c-1;rank=1 Chromosome ena CDS 306374 307858 . - 0 ID=CDS:Rv0255c;Parent=transcript:Rv0255c;protein_id=Rv0255c ### -Chromosome ena gene 307877 309547 . - . ID=gene:Rv0256c;Name=PPE2;biotype=protein_coding;description=PPE family protein PPE2;gene_id=Rv0256c;logic_name=ena +Chromosome ena gene 307877 309547 . - . ID=gene:Rv0256c;Name=PPE2;biotype=protein_coding;description=PPE family protein PPE2;gene_id=Rv0256c;logic_name=ena Chromosome ena mRNA 307877 309547 . - . ID=transcript:Rv0256c;Parent=gene:Rv0256c;Name=PPE2-1;biotype=protein_coding;transcript_id=Rv0256c Chromosome ena exon 307877 309547 . - . Parent=transcript:Rv0256c;Name=Rv0256c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0256c-1;rank=1 Chromosome ena CDS 307877 309547 . - 0 ID=CDS:Rv0256c;Parent=transcript:Rv0256c;protein_id=Rv0256c ### -Chromosome ena gene 309699 310073 . + . ID=gene:Rv0257;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0257;logic_name=ena +Chromosome ena gene 309699 310073 . + . ID=gene:Rv0257;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0257;logic_name=ena Chromosome ena mRNA 309699 310073 . + . ID=transcript:Rv0257;Parent=gene:Rv0257;biotype=protein_coding;transcript_id=Rv0257 Chromosome ena exon 309699 310073 . + . Parent=transcript:Rv0257;Name=Rv0257-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0257-1;rank=1 Chromosome ena CDS 309699 310073 . + 0 ID=CDS:Rv0257;Parent=transcript:Rv0257;protein_id=Rv0257 ### -Chromosome ena gene 310294 310749 . - . ID=gene:Rv0258c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0258c;logic_name=ena +Chromosome ena gene 310294 310749 . - . ID=gene:Rv0258c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0258c;logic_name=ena Chromosome ena mRNA 310294 310749 . - . ID=transcript:Rv0258c;Parent=gene:Rv0258c;biotype=protein_coding;transcript_id=Rv0258c Chromosome ena exon 310294 310749 . - . Parent=transcript:Rv0258c;Name=Rv0258c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0258c-1;rank=1 Chromosome ena CDS 310294 310749 . - 0 ID=CDS:Rv0258c;Parent=transcript:Rv0258c;protein_id=Rv0258c ### -Chromosome ena gene 310774 311517 . - . ID=gene:Rv0259c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0259c;logic_name=ena +Chromosome ena gene 310774 311517 . - . ID=gene:Rv0259c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0259c;logic_name=ena Chromosome ena mRNA 310774 311517 . - . ID=transcript:Rv0259c;Parent=gene:Rv0259c;biotype=protein_coding;transcript_id=Rv0259c Chromosome ena exon 310774 311517 . - . Parent=transcript:Rv0259c;Name=Rv0259c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0259c-1;rank=1 Chromosome ena CDS 310774 311517 . - 0 ID=CDS:Rv0259c;Parent=transcript:Rv0259c;protein_id=Rv0259c ### -Chromosome ena gene 311514 312659 . - . ID=gene:Rv0260c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0260c;logic_name=ena +Chromosome ena gene 311514 312659 . - . ID=gene:Rv0260c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0260c;logic_name=ena Chromosome ena mRNA 311514 312659 . - . ID=transcript:Rv0260c;Parent=gene:Rv0260c;biotype=protein_coding;transcript_id=Rv0260c Chromosome ena exon 311514 312659 . - . Parent=transcript:Rv0260c;Name=Rv0260c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0260c-1;rank=1 Chromosome ena CDS 311514 312659 . - 0 ID=CDS:Rv0260c;Parent=transcript:Rv0260c;protein_id=Rv0260c ### -Chromosome ena gene 312759 314168 . - . ID=gene:Rv0261c;Name=narK3;biotype=protein_coding;description=Probable integral membrane nitrite extrusion protein NarK3 (nitrite facilitator);gene_id=Rv0261c;logic_name=ena +Chromosome ena gene 312759 314168 . - . ID=gene:Rv0261c;Name=narK3;biotype=protein_coding;description=Probable integral membrane nitrite extrusion protein NarK3 (nitrite facilitator);gene_id=Rv0261c;logic_name=ena Chromosome ena mRNA 312759 314168 . - . ID=transcript:Rv0261c;Parent=gene:Rv0261c;Name=narK3-1;biotype=protein_coding;transcript_id=Rv0261c Chromosome ena exon 312759 314168 . - . Parent=transcript:Rv0261c;Name=Rv0261c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0261c-1;rank=1 Chromosome ena CDS 312759 314168 . - 0 ID=CDS:Rv0261c;Parent=transcript:Rv0261c;protein_id=Rv0261c ### -Chromosome ena gene 314309 314854 . - . ID=gene:Rv0262c;Name=aac;biotype=protein_coding;description=Aminoglycoside 2'-N-acetyltransferase Aac (Aac(2')-IC);gene_id=Rv0262c;logic_name=ena +Chromosome ena gene 314309 314854 . - . ID=gene:Rv0262c;Name=aac;biotype=protein_coding;description=Aminoglycoside 2'-N-acetyltransferase Aac (Aac(2')-IC);gene_id=Rv0262c;logic_name=ena Chromosome ena mRNA 314309 314854 . - . ID=transcript:Rv0262c;Parent=gene:Rv0262c;Name=aac-1;biotype=protein_coding;transcript_id=Rv0262c Chromosome ena exon 314309 314854 . - . Parent=transcript:Rv0262c;Name=Rv0262c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0262c-1;rank=1 Chromosome ena CDS 314309 314854 . - 0 ID=CDS:Rv0262c;Parent=transcript:Rv0262c;protein_id=Rv0262c ### -Chromosome ena gene 314864 315766 . - . ID=gene:Rv0263c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0263c;logic_name=ena +Chromosome ena gene 314864 315766 . - . ID=gene:Rv0263c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0263c;logic_name=ena Chromosome ena mRNA 314864 315766 . - . ID=transcript:Rv0263c;Parent=gene:Rv0263c;biotype=protein_coding;transcript_id=Rv0263c Chromosome ena exon 314864 315766 . - . Parent=transcript:Rv0263c;Name=Rv0263c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0263c-1;rank=1 Chromosome ena CDS 314864 315766 . - 0 ID=CDS:Rv0263c;Parent=transcript:Rv0263c;protein_id=Rv0263c ### -Chromosome ena gene 315783 316415 . - . ID=gene:Rv0264c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0264c;logic_name=ena +Chromosome ena gene 315783 316415 . - . ID=gene:Rv0264c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0264c;logic_name=ena Chromosome ena mRNA 315783 316415 . - . ID=transcript:Rv0264c;Parent=gene:Rv0264c;biotype=protein_coding;transcript_id=Rv0264c Chromosome ena exon 315783 316415 . - . Parent=transcript:Rv0264c;Name=Rv0264c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0264c-1;rank=1 Chromosome ena CDS 315783 316415 . - 0 ID=CDS:Rv0264c;Parent=transcript:Rv0264c;protein_id=Rv0264c ### -Chromosome ena gene 316511 317503 . - . ID=gene:Rv0265c;biotype=protein_coding;description=Probable periplasmic iron-transport lipoprotein;gene_id=Rv0265c;logic_name=ena +Chromosome ena gene 316511 317503 . - . ID=gene:Rv0265c;biotype=protein_coding;description=Probable periplasmic iron-transport lipoprotein;gene_id=Rv0265c;logic_name=ena Chromosome ena mRNA 316511 317503 . - . ID=transcript:Rv0265c;Parent=gene:Rv0265c;biotype=protein_coding;transcript_id=Rv0265c Chromosome ena exon 316511 317503 . - . Parent=transcript:Rv0265c;Name=Rv0265c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0265c-1;rank=1 Chromosome ena CDS 316511 317503 . - 0 ID=CDS:Rv0265c;Parent=transcript:Rv0265c;protein_id=Rv0265c ### -Chromosome ena gene 317525 321154 . - . ID=gene:Rv0266c;Name=oplA;biotype=protein_coding;description=Probable 5-oxoprolinase OplA (5-oxo-L-prolinase) (pyroglutamase) (5-OPASE);gene_id=Rv0266c;logic_name=ena +Chromosome ena gene 317525 321154 . - . ID=gene:Rv0266c;Name=oplA;biotype=protein_coding;description=Probable 5-oxoprolinase OplA (5-oxo-L-prolinase) (pyroglutamase) (5-OPASE);gene_id=Rv0266c;logic_name=ena Chromosome ena mRNA 317525 321154 . - . ID=transcript:Rv0266c;Parent=gene:Rv0266c;Name=oplA-1;biotype=protein_coding;transcript_id=Rv0266c Chromosome ena exon 317525 321154 . - . Parent=transcript:Rv0266c;Name=Rv0266c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0266c-1;rank=1 Chromosome ena CDS 317525 321154 . - 0 ID=CDS:Rv0266c;Parent=transcript:Rv0266c;protein_id=Rv0266c ### -Chromosome ena gene 321331 322722 . + . ID=gene:Rv0267;Name=narU;biotype=protein_coding;description=Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator);gene_id=Rv0267;logic_name=ena +Chromosome ena gene 321331 322722 . + . ID=gene:Rv0267;Name=narU;biotype=protein_coding;description=Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator);gene_id=Rv0267;logic_name=ena Chromosome ena mRNA 321331 322722 . + . ID=transcript:Rv0267;Parent=gene:Rv0267;Name=narU-1;biotype=protein_coding;transcript_id=Rv0267 Chromosome ena exon 321331 322722 . + . Parent=transcript:Rv0267;Name=Rv0267-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0267-1;rank=1 Chromosome ena CDS 321331 322722 . + 0 ID=CDS:Rv0267;Parent=transcript:Rv0267;protein_id=Rv0267 ### -Chromosome ena gene 322764 323273 . - . ID=gene:Rv0268c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0268c;logic_name=ena +Chromosome ena gene 322764 323273 . - . ID=gene:Rv0268c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0268c;logic_name=ena Chromosome ena mRNA 322764 323273 . - . ID=transcript:Rv0268c;Parent=gene:Rv0268c;biotype=protein_coding;transcript_id=Rv0268c Chromosome ena exon 322764 323273 . - . Parent=transcript:Rv0268c;Name=Rv0268c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0268c-1;rank=1 Chromosome ena CDS 322764 323273 . - 0 ID=CDS:Rv0268c;Parent=transcript:Rv0268c;protein_id=Rv0268c ### -Chromosome ena gene 323338 324531 . - . ID=gene:Rv0269c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0269c;logic_name=ena +Chromosome ena gene 323338 324531 . - . ID=gene:Rv0269c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0269c;logic_name=ena Chromosome ena mRNA 323338 324531 . - . ID=transcript:Rv0269c;Parent=gene:Rv0269c;biotype=protein_coding;transcript_id=Rv0269c Chromosome ena exon 323338 324531 . - . Parent=transcript:Rv0269c;Name=Rv0269c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0269c-1;rank=1 Chromosome ena CDS 323338 324531 . - 0 ID=CDS:Rv0269c;Parent=transcript:Rv0269c;protein_id=Rv0269c ### -Chromosome ena gene 324567 326249 . + . ID=gene:Rv0270;Name=fadD2;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD2 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0270;logic_name=ena +Chromosome ena gene 324567 326249 . + . ID=gene:Rv0270;Name=fadD2;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD2 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0270;logic_name=ena Chromosome ena mRNA 324567 326249 . + . ID=transcript:Rv0270;Parent=gene:Rv0270;Name=fadD2-1;biotype=protein_coding;transcript_id=Rv0270 Chromosome ena exon 324567 326249 . + . Parent=transcript:Rv0270;Name=Rv0270-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0270-1;rank=1 Chromosome ena CDS 324567 326249 . + 0 ID=CDS:Rv0270;Parent=transcript:Rv0270;protein_id=Rv0270 ### -Chromosome ena gene 326266 328461 . - . ID=gene:Rv0271c;Name=fadE6;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE6;gene_id=Rv0271c;logic_name=ena +Chromosome ena gene 326266 328461 . - . ID=gene:Rv0271c;Name=fadE6;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE6;gene_id=Rv0271c;logic_name=ena Chromosome ena mRNA 326266 328461 . - . ID=transcript:Rv0271c;Parent=gene:Rv0271c;Name=fadE6-1;biotype=protein_coding;transcript_id=Rv0271c Chromosome ena exon 326266 328461 . - . Parent=transcript:Rv0271c;Name=Rv0271c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0271c-1;rank=1 Chromosome ena CDS 326266 328461 . - 0 ID=CDS:Rv0271c;Parent=transcript:Rv0271c;protein_id=Rv0271c ### -Chromosome ena gene 328575 329708 . - . ID=gene:Rv0272c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0272c;logic_name=ena +Chromosome ena gene 328575 329708 . - . ID=gene:Rv0272c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0272c;logic_name=ena Chromosome ena mRNA 328575 329708 . - . ID=transcript:Rv0272c;Parent=gene:Rv0272c;biotype=protein_coding;transcript_id=Rv0272c Chromosome ena exon 328575 329708 . - . Parent=transcript:Rv0272c;Name=Rv0272c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0272c-1;rank=1 Chromosome ena CDS 328575 329708 . - 0 ID=CDS:Rv0272c;Parent=transcript:Rv0272c;protein_id=Rv0272c ### -Chromosome ena gene 329705 330325 . - . ID=gene:Rv0273c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0273c;logic_name=ena +Chromosome ena gene 329705 330325 . - . ID=gene:Rv0273c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0273c;logic_name=ena Chromosome ena mRNA 329705 330325 . - . ID=transcript:Rv0273c;Parent=gene:Rv0273c;biotype=protein_coding;transcript_id=Rv0273c Chromosome ena exon 329705 330325 . - . Parent=transcript:Rv0273c;Name=Rv0273c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0273c-1;rank=1 Chromosome ena CDS 329705 330325 . - 0 ID=CDS:Rv0273c;Parent=transcript:Rv0273c;protein_id=Rv0273c ### -Chromosome ena gene 330422 331003 . + . ID=gene:Rv0274;biotype=protein_coding;description=Conserved protein;gene_id=Rv0274;logic_name=ena +Chromosome ena gene 330422 331003 . + . ID=gene:Rv0274;biotype=protein_coding;description=Conserved protein;gene_id=Rv0274;logic_name=ena Chromosome ena mRNA 330422 331003 . + . ID=transcript:Rv0274;Parent=gene:Rv0274;biotype=protein_coding;transcript_id=Rv0274 Chromosome ena exon 330422 331003 . + . Parent=transcript:Rv0274;Name=Rv0274-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0274-1;rank=1 Chromosome ena CDS 330422 331003 . + 0 ID=CDS:Rv0274;Parent=transcript:Rv0274;protein_id=Rv0274 ### -Chromosome ena gene 330933 331658 . - . ID=gene:Rv0275c;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0275c;logic_name=ena +Chromosome ena gene 330933 331658 . - . ID=gene:Rv0275c;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0275c;logic_name=ena Chromosome ena mRNA 330933 331658 . - . ID=transcript:Rv0275c;Parent=gene:Rv0275c;biotype=protein_coding;transcript_id=Rv0275c Chromosome ena exon 330933 331658 . - . Parent=transcript:Rv0275c;Name=Rv0275c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0275c-1;rank=1 Chromosome ena CDS 330933 331658 . - 0 ID=CDS:Rv0275c;Parent=transcript:Rv0275c;protein_id=Rv0275c ### -Chromosome ena gene 331748 332668 . + . ID=gene:Rv0276;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0276;logic_name=ena +Chromosome ena gene 331748 332668 . + . ID=gene:Rv0276;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0276;logic_name=ena Chromosome ena mRNA 331748 332668 . + . ID=transcript:Rv0276;Parent=gene:Rv0276;biotype=protein_coding;transcript_id=Rv0276 Chromosome ena exon 331748 332668 . + . Parent=transcript:Rv0276;Name=Rv0276-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0276-1;rank=1 Chromosome ena CDS 331748 332668 . + 0 ID=CDS:Rv0276;Parent=transcript:Rv0276;protein_id=Rv0276 ### -Chromosome ena gene 332708 333136 . - . ID=gene:Rv0277c;Name=vapC25;biotype=protein_coding;description=Possible toxin VapC25. Contains PIN domain.;gene_id=Rv0277c;logic_name=ena +Chromosome ena gene 332708 333136 . - . ID=gene:Rv0277c;Name=vapC25;biotype=protein_coding;description=Possible toxin VapC25. Contains PIN domain.;gene_id=Rv0277c;logic_name=ena Chromosome ena mRNA 332708 333136 . - . ID=transcript:Rv0277c;Parent=gene:Rv0277c;Name=vapC25-1;biotype=protein_coding;transcript_id=Rv0277c Chromosome ena exon 332708 333136 . - . Parent=transcript:Rv0277c;Name=Rv0277c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0277c-1;rank=1 Chromosome ena CDS 332708 333136 . - 0 ID=CDS:Rv0277c;Parent=transcript:Rv0277c;protein_id=Rv0277c ### -Chromosome ena pseudogene 333160 333417 . - . ID=gene:Rv0277A;Name=vapB25;biotype=pseudogene;description=Possible antitoxin VapB25;gene_id=Rv0277A;logic_name=ena +Chromosome ena pseudogene 333160 333417 . - . ID=gene:Rv0277A;Name=vapB25;biotype=pseudogene;description=Possible antitoxin VapB25;gene_id=Rv0277A;logic_name=ena Chromosome ena pseudogene 333160 333417 . - . ID=transcript:Rv0277A;Parent=gene:Rv0277A;Name=vapB25-1;biotype=pseudogene;transcript_id=Rv0277A Chromosome ena exon 333160 333417 . - . Parent=transcript:Rv0277A;Name=Rv0277A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0277A-1;rank=1 ### -Chromosome ena gene 333437 336310 . - . ID=gene:Rv0278c;Name=PE_PGRS3;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS3;gene_id=Rv0278c;logic_name=ena +Chromosome ena gene 333437 336310 . - . ID=gene:Rv0278c;Name=PE_PGRS3;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS3;gene_id=Rv0278c;logic_name=ena Chromosome ena mRNA 333437 336310 . - . ID=transcript:Rv0278c;Parent=gene:Rv0278c;Name=PE_PGRS3-1;biotype=protein_coding;transcript_id=Rv0278c Chromosome ena exon 333437 336310 . - . Parent=transcript:Rv0278c;Name=Rv0278c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0278c-1;rank=1 Chromosome ena CDS 333437 336310 . - 0 ID=CDS:Rv0278c;Parent=transcript:Rv0278c;protein_id=Rv0278c ### -Chromosome ena gene 336560 339073 . - . ID=gene:Rv0279c;Name=PE_PGRS4;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS4;gene_id=Rv0279c;logic_name=ena +Chromosome ena gene 336560 339073 . - . ID=gene:Rv0279c;Name=PE_PGRS4;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS4;gene_id=Rv0279c;logic_name=ena Chromosome ena mRNA 336560 339073 . - . ID=transcript:Rv0279c;Parent=gene:Rv0279c;Name=PE_PGRS4-1;biotype=protein_coding;transcript_id=Rv0279c Chromosome ena exon 336560 339073 . - . Parent=transcript:Rv0279c;Name=Rv0279c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0279c-1;rank=1 Chromosome ena CDS 336560 339073 . - 0 ID=CDS:Rv0279c;Parent=transcript:Rv0279c;protein_id=Rv0279c ### -Chromosome ena gene 339364 340974 . + . ID=gene:Rv0280;Name=PPE3;biotype=protein_coding;description=PPE family protein PPE3;gene_id=Rv0280;logic_name=ena +Chromosome ena gene 339364 340974 . + . ID=gene:Rv0280;Name=PPE3;biotype=protein_coding;description=PPE family protein PPE3;gene_id=Rv0280;logic_name=ena Chromosome ena mRNA 339364 340974 . + . ID=transcript:Rv0280;Parent=gene:Rv0280;Name=PPE3-1;biotype=protein_coding;transcript_id=Rv0280 Chromosome ena exon 339364 340974 . + . Parent=transcript:Rv0280;Name=Rv0280-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0280-1;rank=1 Chromosome ena CDS 339364 340974 . + 0 ID=CDS:Rv0280;Parent=transcript:Rv0280;protein_id=Rv0280 ### -Chromosome ena gene 340998 341906 . + . ID=gene:Rv0281;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0281;logic_name=ena +Chromosome ena gene 340998 341906 . + . ID=gene:Rv0281;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0281;logic_name=ena Chromosome ena mRNA 340998 341906 . + . ID=transcript:Rv0281;Parent=gene:Rv0281;biotype=protein_coding;transcript_id=Rv0281 Chromosome ena exon 340998 341906 . + . Parent=transcript:Rv0281;Name=Rv0281-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0281-1;rank=1 Chromosome ena CDS 340998 341906 . + 0 ID=CDS:Rv0281;Parent=transcript:Rv0281;protein_id=Rv0281 ### -Chromosome ena gene 342130 344025 . + . ID=gene:Rv0282;Name=eccA3;biotype=protein_coding;description=ESX conserved component EccA3. ESX-3 type VII secretion system protein.;gene_id=Rv0282;logic_name=ena +Chromosome ena gene 342130 344025 . + . ID=gene:Rv0282;Name=eccA3;biotype=protein_coding;description=ESX conserved component EccA3. ESX-3 type VII secretion system protein.;gene_id=Rv0282;logic_name=ena Chromosome ena mRNA 342130 344025 . + . ID=transcript:Rv0282;Parent=gene:Rv0282;Name=eccA3-1;biotype=protein_coding;transcript_id=Rv0282 Chromosome ena exon 342130 344025 . + . Parent=transcript:Rv0282;Name=Rv0282-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0282-1;rank=1 Chromosome ena CDS 342130 344025 . + 0 ID=CDS:Rv0282;Parent=transcript:Rv0282;protein_id=Rv0282 ### -Chromosome ena gene 344022 345638 . + . ID=gene:Rv0283;Name=eccB3;biotype=protein_coding;description=ESX conserved component EccB3. ESX-3 type VII secretion system protein. Possible membrane protein.;gene_id=Rv0283;logic_name=ena +Chromosome ena gene 344022 345638 . + . ID=gene:Rv0283;Name=eccB3;biotype=protein_coding;description=ESX conserved component EccB3. ESX-3 type VII secretion system protein. Possible membrane protein.;gene_id=Rv0283;logic_name=ena Chromosome ena mRNA 344022 345638 . + . ID=transcript:Rv0283;Parent=gene:Rv0283;Name=eccB3-1;biotype=protein_coding;transcript_id=Rv0283 Chromosome ena exon 344022 345638 . + . Parent=transcript:Rv0283;Name=Rv0283-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0283-1;rank=1 Chromosome ena CDS 344022 345638 . + 0 ID=CDS:Rv0283;Parent=transcript:Rv0283;protein_id=Rv0283 ### -Chromosome ena gene 345635 349627 . + . ID=gene:Rv0284;Name=eccC3;biotype=protein_coding;description=ESX conserved component EccC3. ESX-3 type VII secretion system protein. Possible membrane protein.;gene_id=Rv0284;logic_name=ena +Chromosome ena gene 345635 349627 . + . ID=gene:Rv0284;Name=eccC3;biotype=protein_coding;description=ESX conserved component EccC3. ESX-3 type VII secretion system protein. Possible membrane protein.;gene_id=Rv0284;logic_name=ena Chromosome ena mRNA 345635 349627 . + . ID=transcript:Rv0284;Parent=gene:Rv0284;Name=eccC3-1;biotype=protein_coding;transcript_id=Rv0284 Chromosome ena exon 345635 349627 . + . Parent=transcript:Rv0284;Name=Rv0284-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0284-1;rank=1 Chromosome ena CDS 345635 349627 . + 0 ID=CDS:Rv0284;Parent=transcript:Rv0284;protein_id=Rv0284 ### -Chromosome ena gene 349624 349932 . + . ID=gene:Rv0285;Name=PE5;biotype=protein_coding;description=PE family protein PE5;gene_id=Rv0285;logic_name=ena +Chromosome ena gene 349624 349932 . + . ID=gene:Rv0285;Name=PE5;biotype=protein_coding;description=PE family protein PE5;gene_id=Rv0285;logic_name=ena Chromosome ena mRNA 349624 349932 . + . ID=transcript:Rv0285;Parent=gene:Rv0285;Name=PE5-1;biotype=protein_coding;transcript_id=Rv0285 Chromosome ena exon 349624 349932 . + . Parent=transcript:Rv0285;Name=Rv0285-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0285-1;rank=1 Chromosome ena CDS 349624 349932 . + 0 ID=CDS:Rv0285;Parent=transcript:Rv0285;protein_id=Rv0285 ### -Chromosome ena gene 349935 351476 . + . ID=gene:Rv0286;Name=PPE4;biotype=protein_coding;description=PPE family protein PPE4;gene_id=Rv0286;logic_name=ena +Chromosome ena gene 349935 351476 . + . ID=gene:Rv0286;Name=PPE4;biotype=protein_coding;description=PPE family protein PPE4;gene_id=Rv0286;logic_name=ena Chromosome ena mRNA 349935 351476 . + . ID=transcript:Rv0286;Parent=gene:Rv0286;Name=PPE4-1;biotype=protein_coding;transcript_id=Rv0286 Chromosome ena exon 349935 351476 . + . Parent=transcript:Rv0286;Name=Rv0286-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0286-1;rank=1 Chromosome ena CDS 349935 351476 . + 0 ID=CDS:Rv0286;Parent=transcript:Rv0286;protein_id=Rv0286 ### -Chromosome ena gene 351525 351818 . + . ID=gene:Rv0287;Name=esxG;biotype=protein_coding;description=ESAT-6 like protein EsxG (conserved protein TB9.8);gene_id=Rv0287;logic_name=ena +Chromosome ena gene 351525 351818 . + . ID=gene:Rv0287;Name=esxG;biotype=protein_coding;description=ESAT-6 like protein EsxG (conserved protein TB9.8);gene_id=Rv0287;logic_name=ena Chromosome ena mRNA 351525 351818 . + . ID=transcript:Rv0287;Parent=gene:Rv0287;Name=esxG-1;biotype=protein_coding;transcript_id=Rv0287 Chromosome ena exon 351525 351818 . + . Parent=transcript:Rv0287;Name=Rv0287-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0287-1;rank=1 Chromosome ena CDS 351525 351818 . + 0 ID=CDS:Rv0287;Parent=transcript:Rv0287;protein_id=Rv0287 ### -Chromosome ena gene 351848 352138 . + . ID=gene:Rv0288;Name=esxH;biotype=protein_coding;description=Low molecular weight protein antigen 7 EsxH (10 kDa antigen) (CFP-7) (protein TB10.4);gene_id=Rv0288;logic_name=ena +Chromosome ena gene 351848 352138 . + . ID=gene:Rv0288;Name=esxH;biotype=protein_coding;description=Low molecular weight protein antigen 7 EsxH (10 kDa antigen) (CFP-7) (protein TB10.4);gene_id=Rv0288;logic_name=ena Chromosome ena mRNA 351848 352138 . + . ID=transcript:Rv0288;Parent=gene:Rv0288;Name=esxH-1;biotype=protein_coding;transcript_id=Rv0288 Chromosome ena exon 351848 352138 . + . Parent=transcript:Rv0288;Name=Rv0288-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0288-1;rank=1 Chromosome ena CDS 351848 352138 . + 0 ID=CDS:Rv0288;Parent=transcript:Rv0288;protein_id=Rv0288 ### -Chromosome ena gene 352149 353036 . + . ID=gene:Rv0289;Name=espG3;biotype=protein_coding;description=ESX-3 secretion-associated protein EspG3;gene_id=Rv0289;logic_name=ena +Chromosome ena gene 352149 353036 . + . ID=gene:Rv0289;Name=espG3;biotype=protein_coding;description=ESX-3 secretion-associated protein EspG3;gene_id=Rv0289;logic_name=ena Chromosome ena mRNA 352149 353036 . + . ID=transcript:Rv0289;Parent=gene:Rv0289;Name=espG3-1;biotype=protein_coding;transcript_id=Rv0289 Chromosome ena exon 352149 353036 . + . Parent=transcript:Rv0289;Name=Rv0289-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0289-1;rank=1 Chromosome ena CDS 352149 353036 . + 0 ID=CDS:Rv0289;Parent=transcript:Rv0289;protein_id=Rv0289 ### -Chromosome ena gene 353083 354501 . + . ID=gene:Rv0290;Name=eccD3;biotype=protein_coding;description=ESX conserved component EccD3. ESX-3 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv0290;logic_name=ena +Chromosome ena gene 353083 354501 . + . ID=gene:Rv0290;Name=eccD3;biotype=protein_coding;description=ESX conserved component EccD3. ESX-3 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv0290;logic_name=ena Chromosome ena mRNA 353083 354501 . + . ID=transcript:Rv0290;Parent=gene:Rv0290;Name=eccD3-1;biotype=protein_coding;transcript_id=Rv0290 Chromosome ena exon 353083 354501 . + . Parent=transcript:Rv0290;Name=Rv0290-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0290-1;rank=1 Chromosome ena CDS 353083 354501 . + 0 ID=CDS:Rv0290;Parent=transcript:Rv0290;protein_id=Rv0290 ### -Chromosome ena gene 354498 355883 . + . ID=gene:Rv0291;Name=mycP3;biotype=protein_coding;description=Probable membrane-anchored mycosin MycP3 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-3);gene_id=Rv0291;logic_name=ena +Chromosome ena gene 354498 355883 . + . ID=gene:Rv0291;Name=mycP3;biotype=protein_coding;description=Probable membrane-anchored mycosin MycP3 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-3);gene_id=Rv0291;logic_name=ena Chromosome ena mRNA 354498 355883 . + . ID=transcript:Rv0291;Parent=gene:Rv0291;Name=mycP3-1;biotype=protein_coding;transcript_id=Rv0291 Chromosome ena exon 354498 355883 . + . Parent=transcript:Rv0291;Name=Rv0291-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0291-1;rank=1 Chromosome ena CDS 354498 355883 . + 0 ID=CDS:Rv0291;Parent=transcript:Rv0291;protein_id=Rv0291 ### -Chromosome ena gene 355880 356875 . + . ID=gene:Rv0292;Name=eccE3;biotype=protein_coding;description=ESX conserved component EccE3. ESX-3 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv0292;logic_name=ena +Chromosome ena gene 355880 356875 . + . ID=gene:Rv0292;Name=eccE3;biotype=protein_coding;description=ESX conserved component EccE3. ESX-3 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv0292;logic_name=ena Chromosome ena mRNA 355880 356875 . + . ID=transcript:Rv0292;Parent=gene:Rv0292;Name=eccE3-1;biotype=protein_coding;transcript_id=Rv0292 Chromosome ena exon 355880 356875 . + . Parent=transcript:Rv0292;Name=Rv0292-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0292-1;rank=1 Chromosome ena CDS 355880 356875 . + 0 ID=CDS:Rv0292;Parent=transcript:Rv0292;protein_id=Rv0292 ### -Chromosome ena gene 356862 358064 . - . ID=gene:Rv0293c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0293c;logic_name=ena +Chromosome ena gene 356862 358064 . - . ID=gene:Rv0293c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0293c;logic_name=ena Chromosome ena mRNA 356862 358064 . - . ID=transcript:Rv0293c;Parent=gene:Rv0293c;biotype=protein_coding;transcript_id=Rv0293c Chromosome ena exon 356862 358064 . - . Parent=transcript:Rv0293c;Name=Rv0293c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0293c-1;rank=1 Chromosome ena CDS 356862 358064 . - 0 ID=CDS:Rv0293c;Parent=transcript:Rv0293c;protein_id=Rv0293c ### -Chromosome ena gene 358171 358956 . + . ID=gene:Rv0294;Name=tam;biotype=protein_coding;description=Probable trans-aconitate methyltransferase Tam;gene_id=Rv0294;logic_name=ena +Chromosome ena gene 358171 358956 . + . ID=gene:Rv0294;Name=tam;biotype=protein_coding;description=Probable trans-aconitate methyltransferase Tam;gene_id=Rv0294;logic_name=ena Chromosome ena mRNA 358171 358956 . + . ID=transcript:Rv0294;Parent=gene:Rv0294;Name=tam-1;biotype=protein_coding;transcript_id=Rv0294 Chromosome ena exon 358171 358956 . + . Parent=transcript:Rv0294;Name=Rv0294-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0294-1;rank=1 Chromosome ena CDS 358171 358956 . + 0 ID=CDS:Rv0294;Parent=transcript:Rv0294;protein_id=Rv0294 ### -Chromosome ena gene 358945 359748 . - . ID=gene:Rv0295c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0295c;logic_name=ena +Chromosome ena gene 358945 359748 . - . ID=gene:Rv0295c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0295c;logic_name=ena Chromosome ena mRNA 358945 359748 . - . ID=transcript:Rv0295c;Parent=gene:Rv0295c;biotype=protein_coding;transcript_id=Rv0295c Chromosome ena exon 358945 359748 . - . Parent=transcript:Rv0295c;Name=Rv0295c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0295c-1;rank=1 Chromosome ena CDS 358945 359748 . - 0 ID=CDS:Rv0295c;Parent=transcript:Rv0295c;protein_id=Rv0295c ### -Chromosome ena gene 359758 361155 . - . ID=gene:Rv0296c;biotype=protein_coding;description=Probable sulfatase;gene_id=Rv0296c;logic_name=ena +Chromosome ena gene 359758 361155 . - . ID=gene:Rv0296c;biotype=protein_coding;description=Probable sulfatase;gene_id=Rv0296c;logic_name=ena Chromosome ena mRNA 359758 361155 . - . ID=transcript:Rv0296c;Parent=gene:Rv0296c;biotype=protein_coding;transcript_id=Rv0296c Chromosome ena exon 359758 361155 . - . Parent=transcript:Rv0296c;Name=Rv0296c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0296c-1;rank=1 Chromosome ena CDS 359758 361155 . - 0 ID=CDS:Rv0296c;Parent=transcript:Rv0296c;protein_id=Rv0296c ### -Chromosome ena gene 361334 363109 . + . ID=gene:Rv0297;Name=PE_PGRS5;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS5;gene_id=Rv0297;logic_name=ena +Chromosome ena gene 361334 363109 . + . ID=gene:Rv0297;Name=PE_PGRS5;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS5;gene_id=Rv0297;logic_name=ena Chromosome ena mRNA 361334 363109 . + . ID=transcript:Rv0297;Parent=gene:Rv0297;Name=PE_PGRS5-1;biotype=protein_coding;transcript_id=Rv0297 Chromosome ena exon 361334 363109 . + . Parent=transcript:Rv0297;Name=Rv0297-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0297-1;rank=1 Chromosome ena CDS 361334 363109 . + 0 ID=CDS:Rv0297;Parent=transcript:Rv0297;protein_id=Rv0297 ### -Chromosome ena gene 363252 363479 . + . ID=gene:Rv0298;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0298;logic_name=ena +Chromosome ena gene 363252 363479 . + . ID=gene:Rv0298;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0298;logic_name=ena Chromosome ena mRNA 363252 363479 . + . ID=transcript:Rv0298;Parent=gene:Rv0298;biotype=protein_coding;transcript_id=Rv0298 Chromosome ena exon 363252 363479 . + . Parent=transcript:Rv0298;Name=Rv0298-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0298-1;rank=1 Chromosome ena CDS 363252 363479 . + 0 ID=CDS:Rv0298;Parent=transcript:Rv0298;protein_id=Rv0298 ### -Chromosome ena gene 363476 363778 . + . ID=gene:Rv0299;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0299;logic_name=ena +Chromosome ena gene 363476 363778 . + . ID=gene:Rv0299;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0299;logic_name=ena Chromosome ena mRNA 363476 363778 . + . ID=transcript:Rv0299;Parent=gene:Rv0299;biotype=protein_coding;transcript_id=Rv0299 Chromosome ena exon 363476 363778 . + . Parent=transcript:Rv0299;Name=Rv0299-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0299-1;rank=1 Chromosome ena CDS 363476 363778 . + 0 ID=CDS:Rv0299;Parent=transcript:Rv0299;protein_id=Rv0299 ### -Chromosome ena gene 363826 364047 . + . ID=gene:Rv0300;Name=vapB2;biotype=protein_coding;description=Possible antitoxin VapB2;gene_id=Rv0300;logic_name=ena +Chromosome ena gene 363826 364047 . + . ID=gene:Rv0300;Name=vapB2;biotype=protein_coding;description=Possible antitoxin VapB2;gene_id=Rv0300;logic_name=ena Chromosome ena mRNA 363826 364047 . + . ID=transcript:Rv0300;Parent=gene:Rv0300;Name=vapB2-1;biotype=protein_coding;transcript_id=Rv0300 Chromosome ena exon 363826 364047 . + . Parent=transcript:Rv0300;Name=Rv0300-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0300-1;rank=1 Chromosome ena CDS 363826 364047 . + 0 ID=CDS:Rv0300;Parent=transcript:Rv0300;protein_id=Rv0300 ### -Chromosome ena gene 364044 364469 . + . ID=gene:Rv0301;Name=vapC2;biotype=protein_coding;description=Possible toxin VapC2;gene_id=Rv0301;logic_name=ena +Chromosome ena gene 364044 364469 . + . ID=gene:Rv0301;Name=vapC2;biotype=protein_coding;description=Possible toxin VapC2;gene_id=Rv0301;logic_name=ena Chromosome ena mRNA 364044 364469 . + . ID=transcript:Rv0301;Parent=gene:Rv0301;Name=vapC2-1;biotype=protein_coding;transcript_id=Rv0301 Chromosome ena exon 364044 364469 . + . Parent=transcript:Rv0301;Name=Rv0301-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0301-1;rank=1 Chromosome ena CDS 364044 364469 . + 0 ID=CDS:Rv0301;Parent=transcript:Rv0301;protein_id=Rv0301 ### -Chromosome ena gene 364605 365237 . + . ID=gene:Rv0302;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv0302;logic_name=ena +Chromosome ena gene 364605 365237 . + . ID=gene:Rv0302;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv0302;logic_name=ena Chromosome ena mRNA 364605 365237 . + . ID=transcript:Rv0302;Parent=gene:Rv0302;biotype=protein_coding;transcript_id=Rv0302 Chromosome ena exon 364605 365237 . + . Parent=transcript:Rv0302;Name=Rv0302-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0302-1;rank=1 Chromosome ena CDS 364605 365237 . + 0 ID=CDS:Rv0302;Parent=transcript:Rv0302;protein_id=Rv0302 ### -Chromosome ena gene 365234 366142 . + . ID=gene:Rv0303;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0303;logic_name=ena +Chromosome ena gene 365234 366142 . + . ID=gene:Rv0303;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0303;logic_name=ena Chromosome ena mRNA 365234 366142 . + . ID=transcript:Rv0303;Parent=gene:Rv0303;biotype=protein_coding;transcript_id=Rv0303 Chromosome ena exon 365234 366142 . + . Parent=transcript:Rv0303;Name=Rv0303-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0303-1;rank=1 Chromosome ena CDS 365234 366142 . + 0 ID=CDS:Rv0303;Parent=transcript:Rv0303;protein_id=Rv0303 ### -Chromosome ena gene 366150 372764 . - . ID=gene:Rv0304c;Name=PPE5;biotype=protein_coding;description=PPE family protein PPE5;gene_id=Rv0304c;logic_name=ena +Chromosome ena gene 366150 372764 . - . ID=gene:Rv0304c;Name=PPE5;biotype=protein_coding;description=PPE family protein PPE5;gene_id=Rv0304c;logic_name=ena Chromosome ena mRNA 366150 372764 . - . ID=transcript:Rv0304c;Parent=gene:Rv0304c;Name=PPE5-1;biotype=protein_coding;transcript_id=Rv0304c Chromosome ena exon 366150 372764 . - . Parent=transcript:Rv0304c;Name=Rv0304c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0304c-1;rank=1 Chromosome ena CDS 366150 372764 . - 0 ID=CDS:Rv0304c;Parent=transcript:Rv0304c;protein_id=Rv0304c ### -Chromosome ena gene 372820 375711 . - . ID=gene:Rv0305c;Name=PPE6;biotype=protein_coding;description=PPE family protein PPE6;gene_id=Rv0305c;logic_name=ena +Chromosome ena gene 372820 375711 . - . ID=gene:Rv0305c;Name=PPE6;biotype=protein_coding;description=PPE family protein PPE6;gene_id=Rv0305c;logic_name=ena Chromosome ena mRNA 372820 375711 . - . ID=transcript:Rv0305c;Parent=gene:Rv0305c;Name=PPE6-1;biotype=protein_coding;transcript_id=Rv0305c Chromosome ena exon 372820 375711 . - . Parent=transcript:Rv0305c;Name=Rv0305c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0305c-1;rank=1 Chromosome ena CDS 372820 375711 . - 0 ID=CDS:Rv0305c;Parent=transcript:Rv0305c;protein_id=Rv0305c ### -Chromosome ena gene 375914 376585 . + . ID=gene:Rv0306;biotype=protein_coding;description=Putative oxidoreductase;gene_id=Rv0306;logic_name=ena +Chromosome ena gene 375914 376585 . + . ID=gene:Rv0306;biotype=protein_coding;description=Putative oxidoreductase;gene_id=Rv0306;logic_name=ena Chromosome ena mRNA 375914 376585 . + . ID=transcript:Rv0306;Parent=gene:Rv0306;biotype=protein_coding;transcript_id=Rv0306 Chromosome ena exon 375914 376585 . + . Parent=transcript:Rv0306;Name=Rv0306-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0306-1;rank=1 Chromosome ena CDS 375914 376585 . + 0 ID=CDS:Rv0306;Parent=transcript:Rv0306;protein_id=Rv0306 ### -Chromosome ena gene 376573 377055 . - . ID=gene:Rv0307c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0307c;logic_name=ena +Chromosome ena gene 376573 377055 . - . ID=gene:Rv0307c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0307c;logic_name=ena Chromosome ena mRNA 376573 377055 . - . ID=transcript:Rv0307c;Parent=gene:Rv0307c;biotype=protein_coding;transcript_id=Rv0307c Chromosome ena exon 376573 377055 . - . Parent=transcript:Rv0307c;Name=Rv0307c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0307c-1;rank=1 Chromosome ena CDS 376573 377055 . - 0 ID=CDS:Rv0307c;Parent=transcript:Rv0307c;protein_id=Rv0307c ### -Chromosome ena gene 377113 377829 . + . ID=gene:Rv0308;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0308;logic_name=ena +Chromosome ena gene 377113 377829 . + . ID=gene:Rv0308;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0308;logic_name=ena Chromosome ena mRNA 377113 377829 . + . ID=transcript:Rv0308;Parent=gene:Rv0308;biotype=protein_coding;transcript_id=Rv0308 Chromosome ena exon 377113 377829 . + . Parent=transcript:Rv0308;Name=Rv0308-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0308-1;rank=1 Chromosome ena CDS 377113 377829 . + 0 ID=CDS:Rv0308;Parent=transcript:Rv0308;protein_id=Rv0308 ### -Chromosome ena gene 377931 378587 . + . ID=gene:Rv0309;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0309;logic_name=ena +Chromosome ena gene 377931 378587 . + . ID=gene:Rv0309;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0309;logic_name=ena Chromosome ena mRNA 377931 378587 . + . ID=transcript:Rv0309;Parent=gene:Rv0309;biotype=protein_coding;transcript_id=Rv0309 Chromosome ena exon 377931 378587 . + . Parent=transcript:Rv0309;Name=Rv0309-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0309-1;rank=1 Chromosome ena CDS 377931 378587 . + 0 ID=CDS:Rv0309;Parent=transcript:Rv0309;protein_id=Rv0309 ### -Chromosome ena gene 378657 379148 . - . ID=gene:Rv0310c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0310c;logic_name=ena +Chromosome ena gene 378657 379148 . - . ID=gene:Rv0310c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0310c;logic_name=ena Chromosome ena mRNA 378657 379148 . - . ID=transcript:Rv0310c;Parent=gene:Rv0310c;biotype=protein_coding;transcript_id=Rv0310c Chromosome ena exon 378657 379148 . - . Parent=transcript:Rv0310c;Name=Rv0310c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0310c-1;rank=1 Chromosome ena CDS 378657 379148 . - 0 ID=CDS:Rv0310c;Parent=transcript:Rv0310c;protein_id=Rv0310c ### -Chromosome ena gene 379172 380401 . + . ID=gene:Rv0311;biotype=protein_coding;description=Unknown protein;gene_id=Rv0311;logic_name=ena +Chromosome ena gene 379172 380401 . + . ID=gene:Rv0311;biotype=protein_coding;description=Unknown protein;gene_id=Rv0311;logic_name=ena Chromosome ena mRNA 379172 380401 . + . ID=transcript:Rv0311;Parent=gene:Rv0311;biotype=protein_coding;transcript_id=Rv0311 Chromosome ena exon 379172 380401 . + . Parent=transcript:Rv0311;Name=Rv0311-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0311-1;rank=1 Chromosome ena CDS 379172 380401 . + 0 ID=CDS:Rv0311;Parent=transcript:Rv0311;protein_id=Rv0311 ### -Chromosome ena gene 380556 382418 . + . ID=gene:Rv0312;biotype=protein_coding;description=Conserved hypothetical proline and threonine rich protein;gene_id=Rv0312;logic_name=ena +Chromosome ena gene 380556 382418 . + . ID=gene:Rv0312;biotype=protein_coding;description=Conserved hypothetical proline and threonine rich protein;gene_id=Rv0312;logic_name=ena Chromosome ena mRNA 380556 382418 . + . ID=transcript:Rv0312;Parent=gene:Rv0312;biotype=protein_coding;transcript_id=Rv0312 Chromosome ena exon 380556 382418 . + . Parent=transcript:Rv0312;Name=Rv0312-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0312-1;rank=1 Chromosome ena CDS 380556 382418 . + 0 ID=CDS:Rv0312;Parent=transcript:Rv0312;protein_id=Rv0312 ### -Chromosome ena gene 382490 382876 . + . ID=gene:Rv0313;biotype=protein_coding;description=Conserved protein;gene_id=Rv0313;logic_name=ena +Chromosome ena gene 382490 382876 . + . ID=gene:Rv0313;biotype=protein_coding;description=Conserved protein;gene_id=Rv0313;logic_name=ena Chromosome ena mRNA 382490 382876 . + . ID=transcript:Rv0313;Parent=gene:Rv0313;biotype=protein_coding;transcript_id=Rv0313 Chromosome ena exon 382490 382876 . + . Parent=transcript:Rv0313;Name=Rv0313-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0313-1;rank=1 Chromosome ena CDS 382490 382876 . + 0 ID=CDS:Rv0313;Parent=transcript:Rv0313;protein_id=Rv0313 ### -Chromosome ena gene 382879 383541 . - . ID=gene:Rv0314c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0314c;logic_name=ena +Chromosome ena gene 382879 383541 . - . ID=gene:Rv0314c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0314c;logic_name=ena Chromosome ena mRNA 382879 383541 . - . ID=transcript:Rv0314c;Parent=gene:Rv0314c;biotype=protein_coding;transcript_id=Rv0314c Chromosome ena exon 382879 383541 . - . Parent=transcript:Rv0314c;Name=Rv0314c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0314c-1;rank=1 Chromosome ena CDS 382879 383541 . - 0 ID=CDS:Rv0314c;Parent=transcript:Rv0314c;protein_id=Rv0314c ### -Chromosome ena gene 383602 384486 . + . ID=gene:Rv0315;biotype=protein_coding;description=Possible beta-1%2C3-glucanase precursor;gene_id=Rv0315;logic_name=ena +Chromosome ena gene 383602 384486 . + . ID=gene:Rv0315;biotype=protein_coding;description=Possible beta-1%2C3-glucanase precursor;gene_id=Rv0315;logic_name=ena Chromosome ena mRNA 383602 384486 . + . ID=transcript:Rv0315;Parent=gene:Rv0315;biotype=protein_coding;transcript_id=Rv0315 Chromosome ena exon 383602 384486 . + . Parent=transcript:Rv0315;Name=Rv0315-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0315-1;rank=1 Chromosome ena CDS 383602 384486 . + 0 ID=CDS:Rv0315;Parent=transcript:Rv0315;protein_id=Rv0315 ### -Chromosome ena gene 384535 385149 . + . ID=gene:Rv0316;biotype=protein_coding;description=Possible muconolactone isomerase;gene_id=Rv0316;logic_name=ena +Chromosome ena gene 384535 385149 . + . ID=gene:Rv0316;biotype=protein_coding;description=Possible muconolactone isomerase;gene_id=Rv0316;logic_name=ena Chromosome ena mRNA 384535 385149 . + . ID=transcript:Rv0316;Parent=gene:Rv0316;biotype=protein_coding;transcript_id=Rv0316 Chromosome ena exon 384535 385149 . + . Parent=transcript:Rv0316;Name=Rv0316-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0316-1;rank=1 Chromosome ena CDS 384535 385149 . + 0 ID=CDS:Rv0316;Parent=transcript:Rv0316;protein_id=Rv0316 ### -Chromosome ena gene 385173 385943 . - . ID=gene:Rv0317c;Name=glpQ2;biotype=protein_coding;description=Possible glycerophosphoryl diester phosphodiesterase GlpQ2 (glycerophosphodiester phosphodiesterase);gene_id=Rv0317c;logic_name=ena +Chromosome ena gene 385173 385943 . - . ID=gene:Rv0317c;Name=glpQ2;biotype=protein_coding;description=Possible glycerophosphoryl diester phosphodiesterase GlpQ2 (glycerophosphodiester phosphodiesterase);gene_id=Rv0317c;logic_name=ena Chromosome ena mRNA 385173 385943 . - . ID=transcript:Rv0317c;Parent=gene:Rv0317c;Name=glpQ2-1;biotype=protein_coding;transcript_id=Rv0317c Chromosome ena exon 385173 385943 . - . Parent=transcript:Rv0317c;Name=Rv0317c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0317c-1;rank=1 Chromosome ena CDS 385173 385943 . - 0 ID=CDS:Rv0317c;Parent=transcript:Rv0317c;protein_id=Rv0317c @@ -1656,862 +1656,862 @@ Chromosome ena transcript 386204 386274 . - . ID=transcript:EBG00000313358;Paren Chromosome ena exon 386204 386274 . - . Parent=transcript:EBG00000313358;Name=EBG00000313358;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313358;rank=1 ### Chromosome ena_gene biological_region 386204 386274 . - . external_name=AL123456.3:gene:complement(386204..386274);logic_name=ena_gene -Chromosome ena gene 386305 387099 . - . ID=gene:Rv0318c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0318c;logic_name=ena +Chromosome ena gene 386305 387099 . - . ID=gene:Rv0318c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0318c;logic_name=ena Chromosome ena mRNA 386305 387099 . - . ID=transcript:Rv0318c;Parent=gene:Rv0318c;biotype=protein_coding;transcript_id=Rv0318c Chromosome ena exon 386305 387099 . - . Parent=transcript:Rv0318c;Name=Rv0318c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0318c-1;rank=1 Chromosome ena CDS 386305 387099 . - 0 ID=CDS:Rv0318c;Parent=transcript:Rv0318c;protein_id=Rv0318c ### -Chromosome ena gene 387148 387816 . + . ID=gene:Rv0319;Name=pcp;biotype=protein_coding;description=Probable pyrrolidone-carboxylate peptidase Pcp (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (pyrase);gene_id=Rv0319;logic_name=ena +Chromosome ena gene 387148 387816 . + . ID=gene:Rv0319;Name=pcp;biotype=protein_coding;description=Probable pyrrolidone-carboxylate peptidase Pcp (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (pyrase);gene_id=Rv0319;logic_name=ena Chromosome ena mRNA 387148 387816 . + . ID=transcript:Rv0319;Parent=gene:Rv0319;Name=pcp-1;biotype=protein_coding;transcript_id=Rv0319 Chromosome ena exon 387148 387816 . + . Parent=transcript:Rv0319;Name=Rv0319-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0319-1;rank=1 Chromosome ena CDS 387148 387816 . + 0 ID=CDS:Rv0319;Parent=transcript:Rv0319;protein_id=Rv0319 ### -Chromosome ena gene 387888 388550 . + . ID=gene:Rv0320;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0320;logic_name=ena +Chromosome ena gene 387888 388550 . + . ID=gene:Rv0320;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0320;logic_name=ena Chromosome ena mRNA 387888 388550 . + . ID=transcript:Rv0320;Parent=gene:Rv0320;biotype=protein_coding;transcript_id=Rv0320 Chromosome ena exon 387888 388550 . + . Parent=transcript:Rv0320;Name=Rv0320-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0320-1;rank=1 Chromosome ena CDS 387888 388550 . + 0 ID=CDS:Rv0320;Parent=transcript:Rv0320;protein_id=Rv0320 ### -Chromosome ena gene 388582 389154 . + . ID=gene:Rv0321;Name=dcd;biotype=protein_coding;description=Probable deoxycytidine triphosphate deaminase Dcd (dCTP deaminase);gene_id=Rv0321;logic_name=ena +Chromosome ena gene 388582 389154 . + . ID=gene:Rv0321;Name=dcd;biotype=protein_coding;description=Probable deoxycytidine triphosphate deaminase Dcd (dCTP deaminase);gene_id=Rv0321;logic_name=ena Chromosome ena mRNA 388582 389154 . + . ID=transcript:Rv0321;Parent=gene:Rv0321;Name=dcd-1;biotype=protein_coding;transcript_id=Rv0321 Chromosome ena exon 388582 389154 . + . Parent=transcript:Rv0321;Name=Rv0321-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0321-1;rank=1 Chromosome ena CDS 388582 389154 . + 0 ID=CDS:Rv0321;Parent=transcript:Rv0321;protein_id=Rv0321 ### -Chromosome ena gene 389260 390591 . + . ID=gene:Rv0322;Name=udgA;biotype=protein_coding;description=Probable UDP-glucose 6-dehydrogenase UdgA (UDP-GLC dehydrogenase) (UDP-GLCDH) (UDPGDH);gene_id=Rv0322;logic_name=ena +Chromosome ena gene 389260 390591 . + . ID=gene:Rv0322;Name=udgA;biotype=protein_coding;description=Probable UDP-glucose 6-dehydrogenase UdgA (UDP-GLC dehydrogenase) (UDP-GLCDH) (UDPGDH);gene_id=Rv0322;logic_name=ena Chromosome ena mRNA 389260 390591 . + . ID=transcript:Rv0322;Parent=gene:Rv0322;Name=udgA-1;biotype=protein_coding;transcript_id=Rv0322 Chromosome ena exon 389260 390591 . + . Parent=transcript:Rv0322;Name=Rv0322-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0322-1;rank=1 Chromosome ena CDS 389260 390591 . + 0 ID=CDS:Rv0322;Parent=transcript:Rv0322;protein_id=Rv0322 ### -Chromosome ena gene 390580 391251 . - . ID=gene:Rv0323c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0323c;logic_name=ena +Chromosome ena gene 390580 391251 . - . ID=gene:Rv0323c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0323c;logic_name=ena Chromosome ena mRNA 390580 391251 . - . ID=transcript:Rv0323c;Parent=gene:Rv0323c;biotype=protein_coding;transcript_id=Rv0323c Chromosome ena exon 390580 391251 . - . Parent=transcript:Rv0323c;Name=Rv0323c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0323c-1;rank=1 Chromosome ena CDS 390580 391251 . - 0 ID=CDS:Rv0323c;Parent=transcript:Rv0323c;protein_id=Rv0323c ### -Chromosome ena gene 391352 392032 . + . ID=gene:Rv0324;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly ArsR-family);gene_id=Rv0324;logic_name=ena +Chromosome ena gene 391352 392032 . + . ID=gene:Rv0324;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly ArsR-family);gene_id=Rv0324;logic_name=ena Chromosome ena mRNA 391352 392032 . + . ID=transcript:Rv0324;Parent=gene:Rv0324;biotype=protein_coding;transcript_id=Rv0324 Chromosome ena exon 391352 392032 . + . Parent=transcript:Rv0324;Name=Rv0324-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0324-1;rank=1 Chromosome ena CDS 391352 392032 . + 0 ID=CDS:Rv0324;Parent=transcript:Rv0324;protein_id=Rv0324 ### -Chromosome ena gene 392039 392263 . + . ID=gene:Rv0325;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0325;logic_name=ena +Chromosome ena gene 392039 392263 . + . ID=gene:Rv0325;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0325;logic_name=ena Chromosome ena mRNA 392039 392263 . + . ID=transcript:Rv0325;Parent=gene:Rv0325;biotype=protein_coding;transcript_id=Rv0325 Chromosome ena exon 392039 392263 . + . Parent=transcript:Rv0325;Name=Rv0325-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0325-1;rank=1 Chromosome ena CDS 392039 392263 . + 0 ID=CDS:Rv0325;Parent=transcript:Rv0325;protein_id=Rv0325 ### -Chromosome ena gene 392273 392728 . + . ID=gene:Rv0326;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0326;logic_name=ena +Chromosome ena gene 392273 392728 . + . ID=gene:Rv0326;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0326;logic_name=ena Chromosome ena mRNA 392273 392728 . + . ID=transcript:Rv0326;Parent=gene:Rv0326;biotype=protein_coding;transcript_id=Rv0326 Chromosome ena exon 392273 392728 . + . Parent=transcript:Rv0326;Name=Rv0326-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0326-1;rank=1 Chromosome ena CDS 392273 392728 . + 0 ID=CDS:Rv0326;Parent=transcript:Rv0326;protein_id=Rv0326 ### -Chromosome ena gene 392696 394045 . - . ID=gene:Rv0327c;Name=cyp135A1;biotype=protein_coding;description=Possible cytochrome P450 135A1 Cyp135A1;gene_id=Rv0327c;logic_name=ena +Chromosome ena gene 392696 394045 . - . ID=gene:Rv0327c;Name=cyp135A1;biotype=protein_coding;description=Possible cytochrome P450 135A1 Cyp135A1;gene_id=Rv0327c;logic_name=ena Chromosome ena mRNA 392696 394045 . - . ID=transcript:Rv0327c;Parent=gene:Rv0327c;Name=cyp135A1-1;biotype=protein_coding;transcript_id=Rv0327c Chromosome ena exon 392696 394045 . - . Parent=transcript:Rv0327c;Name=Rv0327c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0327c-1;rank=1 Chromosome ena CDS 392696 394045 . - 0 ID=CDS:Rv0327c;Parent=transcript:Rv0327c;protein_id=Rv0327c ### -Chromosome ena gene 394111 394713 . + . ID=gene:Rv0328;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR/AcrR-family);gene_id=Rv0328;logic_name=ena +Chromosome ena gene 394111 394713 . + . ID=gene:Rv0328;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly TetR/AcrR-family);gene_id=Rv0328;logic_name=ena Chromosome ena mRNA 394111 394713 . + . ID=transcript:Rv0328;Parent=gene:Rv0328;biotype=protein_coding;transcript_id=Rv0328 Chromosome ena exon 394111 394713 . + . Parent=transcript:Rv0328;Name=Rv0328-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0328-1;rank=1 Chromosome ena CDS 394111 394713 . + 0 ID=CDS:Rv0328;Parent=transcript:Rv0328;protein_id=Rv0328 ### -Chromosome ena gene 394694 395320 . - . ID=gene:Rv0329c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0329c;logic_name=ena +Chromosome ena gene 394694 395320 . - . ID=gene:Rv0329c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0329c;logic_name=ena Chromosome ena mRNA 394694 395320 . - . ID=transcript:Rv0329c;Parent=gene:Rv0329c;biotype=protein_coding;transcript_id=Rv0329c Chromosome ena exon 394694 395320 . - . Parent=transcript:Rv0329c;Name=Rv0329c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0329c-1;rank=1 Chromosome ena CDS 394694 395320 . - 0 ID=CDS:Rv0329c;Parent=transcript:Rv0329c;protein_id=Rv0329c ### -Chromosome ena gene 395347 396087 . - . ID=gene:Rv0330c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0330c;logic_name=ena +Chromosome ena gene 395347 396087 . - . ID=gene:Rv0330c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0330c;logic_name=ena Chromosome ena mRNA 395347 396087 . - . ID=transcript:Rv0330c;Parent=gene:Rv0330c;biotype=protein_coding;transcript_id=Rv0330c Chromosome ena exon 395347 396087 . - . Parent=transcript:Rv0330c;Name=Rv0330c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0330c-1;rank=1 Chromosome ena CDS 395347 396087 . - 0 ID=CDS:Rv0330c;Parent=transcript:Rv0330c;protein_id=Rv0330c ### -Chromosome ena gene 396201 397367 . + . ID=gene:Rv0331;biotype=protein_coding;description=Possible dehydrogenase/reductase;gene_id=Rv0331;logic_name=ena +Chromosome ena gene 396201 397367 . + . ID=gene:Rv0331;biotype=protein_coding;description=Possible dehydrogenase/reductase;gene_id=Rv0331;logic_name=ena Chromosome ena mRNA 396201 397367 . + . ID=transcript:Rv0331;Parent=gene:Rv0331;biotype=protein_coding;transcript_id=Rv0331 Chromosome ena exon 396201 397367 . + . Parent=transcript:Rv0331;Name=Rv0331-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0331-1;rank=1 Chromosome ena CDS 396201 397367 . + 0 ID=CDS:Rv0331;Parent=transcript:Rv0331;protein_id=Rv0331 ### -Chromosome ena gene 397442 398227 . + . ID=gene:Rv0332;biotype=protein_coding;description=Conserved protein;gene_id=Rv0332;logic_name=ena +Chromosome ena gene 397442 398227 . + . ID=gene:Rv0332;biotype=protein_coding;description=Conserved protein;gene_id=Rv0332;logic_name=ena Chromosome ena mRNA 397442 398227 . + . ID=transcript:Rv0332;Parent=gene:Rv0332;biotype=protein_coding;transcript_id=Rv0332 Chromosome ena exon 397442 398227 . + . Parent=transcript:Rv0332;Name=Rv0332-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0332-1;rank=1 Chromosome ena CDS 397442 398227 . + 0 ID=CDS:Rv0332;Parent=transcript:Rv0332;protein_id=Rv0332 ### -Chromosome ena gene 398254 398628 . + . ID=gene:Rv0333;biotype=protein_coding;description=Unknown protein;gene_id=Rv0333;logic_name=ena +Chromosome ena gene 398254 398628 . + . ID=gene:Rv0333;biotype=protein_coding;description=Unknown protein;gene_id=Rv0333;logic_name=ena Chromosome ena mRNA 398254 398628 . + . ID=transcript:Rv0333;Parent=gene:Rv0333;biotype=protein_coding;transcript_id=Rv0333 Chromosome ena exon 398254 398628 . + . Parent=transcript:Rv0333;Name=Rv0333-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0333-1;rank=1 Chromosome ena CDS 398254 398628 . + 0 ID=CDS:Rv0333;Parent=transcript:Rv0333;protein_id=Rv0333 ### -Chromosome ena gene 398658 399524 . + . ID=gene:Rv0334;Name=rmlA;biotype=protein_coding;description=Alpha-D-glucose-1-phosphate thymidylyltransferase RmlA (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase);gene_id=Rv0334;logic_name=ena +Chromosome ena gene 398658 399524 . + . ID=gene:Rv0334;Name=rmlA;biotype=protein_coding;description=Alpha-D-glucose-1-phosphate thymidylyltransferase RmlA (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase);gene_id=Rv0334;logic_name=ena Chromosome ena mRNA 398658 399524 . + . ID=transcript:Rv0334;Parent=gene:Rv0334;Name=rmlA-1;biotype=protein_coding;transcript_id=Rv0334 Chromosome ena exon 398658 399524 . + . Parent=transcript:Rv0334;Name=Rv0334-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0334-1;rank=1 Chromosome ena CDS 398658 399524 . + 0 ID=CDS:Rv0334;Parent=transcript:Rv0334;protein_id=Rv0334 ### -Chromosome ena gene 399535 400050 . - . ID=gene:Rv0335c;Name=PE6;biotype=protein_coding;description=PE family protein PE6;gene_id=Rv0335c;logic_name=ena +Chromosome ena gene 399535 400050 . - . ID=gene:Rv0335c;Name=PE6;biotype=protein_coding;description=PE family protein PE6;gene_id=Rv0335c;logic_name=ena Chromosome ena mRNA 399535 400050 . - . ID=transcript:Rv0335c;Parent=gene:Rv0335c;Name=PE6-1;biotype=protein_coding;transcript_id=Rv0335c Chromosome ena exon 399535 400050 . - . Parent=transcript:Rv0335c;Name=Rv0335c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0335c-1;rank=1 Chromosome ena CDS 399535 400050 . - 0 ID=CDS:Rv0335c;Parent=transcript:Rv0335c;protein_id=Rv0335c ### -Chromosome ena gene 400192 401703 . + . ID=gene:Rv0336;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0336;logic_name=ena +Chromosome ena gene 400192 401703 . + . ID=gene:Rv0336;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0336;logic_name=ena Chromosome ena mRNA 400192 401703 . + . ID=transcript:Rv0336;Parent=gene:Rv0336;biotype=protein_coding;transcript_id=Rv0336 Chromosome ena exon 400192 401703 . + . Parent=transcript:Rv0336;Name=Rv0336-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0336-1;rank=1 Chromosome ena CDS 400192 401703 . + 0 ID=CDS:Rv0336;Parent=transcript:Rv0336;protein_id=Rv0336 ### -Chromosome ena gene 401873 403162 . - . ID=gene:Rv0337c;Name=aspC;biotype=protein_coding;description=Probable aspartate aminotransferase AspC (transaminase A) (ASPAT);gene_id=Rv0337c;logic_name=ena +Chromosome ena gene 401873 403162 . - . ID=gene:Rv0337c;Name=aspC;biotype=protein_coding;description=Probable aspartate aminotransferase AspC (transaminase A) (ASPAT);gene_id=Rv0337c;logic_name=ena Chromosome ena mRNA 401873 403162 . - . ID=transcript:Rv0337c;Parent=gene:Rv0337c;Name=aspC-1;biotype=protein_coding;transcript_id=Rv0337c Chromosome ena exon 401873 403162 . - . Parent=transcript:Rv0337c;Name=Rv0337c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0337c-1;rank=1 Chromosome ena CDS 401873 403162 . - 0 ID=CDS:Rv0337c;Parent=transcript:Rv0337c;protein_id=Rv0337c ### -Chromosome ena gene 403193 405841 . - . ID=gene:Rv0338c;biotype=protein_coding;description=Probable iron-sulfur-binding reductase;gene_id=Rv0338c;logic_name=ena +Chromosome ena gene 403193 405841 . - . ID=gene:Rv0338c;biotype=protein_coding;description=Probable iron-sulfur-binding reductase;gene_id=Rv0338c;logic_name=ena Chromosome ena mRNA 403193 405841 . - . ID=transcript:Rv0338c;Parent=gene:Rv0338c;biotype=protein_coding;transcript_id=Rv0338c Chromosome ena exon 403193 405841 . - . Parent=transcript:Rv0338c;Name=Rv0338c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0338c-1;rank=1 Chromosome ena CDS 403193 405841 . - 0 ID=CDS:Rv0338c;Parent=transcript:Rv0338c;protein_id=Rv0338c ### -Chromosome ena gene 405950 408448 . - . ID=gene:Rv0339c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0339c;logic_name=ena +Chromosome ena gene 405950 408448 . - . ID=gene:Rv0339c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0339c;logic_name=ena Chromosome ena mRNA 405950 408448 . - . ID=transcript:Rv0339c;Parent=gene:Rv0339c;biotype=protein_coding;transcript_id=Rv0339c Chromosome ena exon 405950 408448 . - . Parent=transcript:Rv0339c;Name=Rv0339c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0339c-1;rank=1 Chromosome ena CDS 405950 408448 . - 0 ID=CDS:Rv0339c;Parent=transcript:Rv0339c;protein_id=Rv0339c ### -Chromosome ena gene 408634 409173 . + . ID=gene:Rv0340;biotype=protein_coding;description=Conserved protein;gene_id=Rv0340;logic_name=ena +Chromosome ena gene 408634 409173 . + . ID=gene:Rv0340;biotype=protein_coding;description=Conserved protein;gene_id=Rv0340;logic_name=ena Chromosome ena mRNA 408634 409173 . + . ID=transcript:Rv0340;Parent=gene:Rv0340;biotype=protein_coding;transcript_id=Rv0340 Chromosome ena exon 408634 409173 . + . Parent=transcript:Rv0340;Name=Rv0340-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0340-1;rank=1 Chromosome ena CDS 408634 409173 . + 0 ID=CDS:Rv0340;Parent=transcript:Rv0340;protein_id=Rv0340 ### -Chromosome ena gene 409362 410801 . + . ID=gene:Rv0341;Name=iniB;biotype=protein_coding;description=Isoniazid inductible gene protein IniB;gene_id=Rv0341;logic_name=ena +Chromosome ena gene 409362 410801 . + . ID=gene:Rv0341;Name=iniB;biotype=protein_coding;description=Isoniazid inductible gene protein IniB;gene_id=Rv0341;logic_name=ena Chromosome ena mRNA 409362 410801 . + . ID=transcript:Rv0341;Parent=gene:Rv0341;Name=iniB-1;biotype=protein_coding;transcript_id=Rv0341 Chromosome ena exon 409362 410801 . + . Parent=transcript:Rv0341;Name=Rv0341-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0341-1;rank=1 Chromosome ena CDS 409362 410801 . + 0 ID=CDS:Rv0341;Parent=transcript:Rv0341;protein_id=Rv0341 ### -Chromosome ena gene 410838 412760 . + . ID=gene:Rv0342;Name=iniA;biotype=protein_coding;description=Isoniazid inductible gene protein IniA;gene_id=Rv0342;logic_name=ena +Chromosome ena gene 410838 412760 . + . ID=gene:Rv0342;Name=iniA;biotype=protein_coding;description=Isoniazid inductible gene protein IniA;gene_id=Rv0342;logic_name=ena Chromosome ena mRNA 410838 412760 . + . ID=transcript:Rv0342;Parent=gene:Rv0342;Name=iniA-1;biotype=protein_coding;transcript_id=Rv0342 Chromosome ena exon 410838 412760 . + . Parent=transcript:Rv0342;Name=Rv0342-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0342-1;rank=1 Chromosome ena CDS 410838 412760 . + 0 ID=CDS:Rv0342;Parent=transcript:Rv0342;protein_id=Rv0342 ### -Chromosome ena gene 412757 414238 . + . ID=gene:Rv0343;Name=iniC;biotype=protein_coding;description=Isoniazid inductible gene protein IniC;gene_id=Rv0343;logic_name=ena +Chromosome ena gene 412757 414238 . + . ID=gene:Rv0343;Name=iniC;biotype=protein_coding;description=Isoniazid inductible gene protein IniC;gene_id=Rv0343;logic_name=ena Chromosome ena mRNA 412757 414238 . + . ID=transcript:Rv0343;Parent=gene:Rv0343;Name=iniC-1;biotype=protein_coding;transcript_id=Rv0343 Chromosome ena exon 412757 414238 . + . Parent=transcript:Rv0343;Name=Rv0343-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0343-1;rank=1 Chromosome ena CDS 412757 414238 . + 0 ID=CDS:Rv0343;Parent=transcript:Rv0343;protein_id=Rv0343 ### -Chromosome ena gene 414381 414941 . - . ID=gene:Rv0344c;Name=lpqJ;biotype=protein_coding;description=Probable lipoprotein LpqJ;gene_id=Rv0344c;logic_name=ena +Chromosome ena gene 414381 414941 . - . ID=gene:Rv0344c;Name=lpqJ;biotype=protein_coding;description=Probable lipoprotein LpqJ;gene_id=Rv0344c;logic_name=ena Chromosome ena mRNA 414381 414941 . - . ID=transcript:Rv0344c;Parent=gene:Rv0344c;Name=lpqJ-1;biotype=protein_coding;transcript_id=Rv0344c Chromosome ena exon 414381 414941 . - . Parent=transcript:Rv0344c;Name=Rv0344c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0344c-1;rank=1 Chromosome ena CDS 414381 414941 . - 0 ID=CDS:Rv0344c;Parent=transcript:Rv0344c;protein_id=Rv0344c ### -Chromosome ena gene 415050 415460 . + . ID=gene:Rv0345;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0345;logic_name=ena +Chromosome ena gene 415050 415460 . + . ID=gene:Rv0345;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0345;logic_name=ena Chromosome ena mRNA 415050 415460 . + . ID=transcript:Rv0345;Parent=gene:Rv0345;biotype=protein_coding;transcript_id=Rv0345 Chromosome ena exon 415050 415460 . + . Parent=transcript:Rv0345;Name=Rv0345-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0345-1;rank=1 Chromosome ena CDS 415050 415460 . + 0 ID=CDS:Rv0345;Parent=transcript:Rv0345;protein_id=Rv0345 ### -Chromosome ena gene 415502 416965 . - . ID=gene:Rv0346c;Name=ansP2;biotype=protein_coding;description=Possible L-asparagine permease AnsP2 (L-asparagine transport protein);gene_id=Rv0346c;logic_name=ena +Chromosome ena gene 415502 416965 . - . ID=gene:Rv0346c;Name=ansP2;biotype=protein_coding;description=Possible L-asparagine permease AnsP2 (L-asparagine transport protein);gene_id=Rv0346c;logic_name=ena Chromosome ena mRNA 415502 416965 . - . ID=transcript:Rv0346c;Parent=gene:Rv0346c;Name=ansP2-1;biotype=protein_coding;transcript_id=Rv0346c Chromosome ena exon 415502 416965 . - . Parent=transcript:Rv0346c;Name=Rv0346c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0346c-1;rank=1 Chromosome ena CDS 415502 416965 . - 0 ID=CDS:Rv0346c;Parent=transcript:Rv0346c;protein_id=Rv0346c ### -Chromosome ena gene 417304 418290 . + . ID=gene:Rv0347;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0347;logic_name=ena +Chromosome ena gene 417304 418290 . + . ID=gene:Rv0347;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0347;logic_name=ena Chromosome ena mRNA 417304 418290 . + . ID=transcript:Rv0347;Parent=gene:Rv0347;biotype=protein_coding;transcript_id=Rv0347 Chromosome ena exon 417304 418290 . + . Parent=transcript:Rv0347;Name=Rv0347-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0347-1;rank=1 Chromosome ena CDS 417304 418290 . + 0 ID=CDS:Rv0347;Parent=transcript:Rv0347;protein_id=Rv0347 ### -Chromosome ena gene 418293 418946 . + . ID=gene:Rv0348;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0348;logic_name=ena +Chromosome ena gene 418293 418946 . + . ID=gene:Rv0348;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0348;logic_name=ena Chromosome ena mRNA 418293 418946 . + . ID=transcript:Rv0348;Parent=gene:Rv0348;biotype=protein_coding;transcript_id=Rv0348 Chromosome ena exon 418293 418946 . + . Parent=transcript:Rv0348;Name=Rv0348-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0348-1;rank=1 Chromosome ena CDS 418293 418946 . + 0 ID=CDS:Rv0348;Parent=transcript:Rv0348;protein_id=Rv0348 ### -Chromosome ena gene 418949 419608 . + . ID=gene:Rv0349;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0349;logic_name=ena +Chromosome ena gene 418949 419608 . + . ID=gene:Rv0349;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0349;logic_name=ena Chromosome ena mRNA 418949 419608 . + . ID=transcript:Rv0349;Parent=gene:Rv0349;biotype=protein_coding;transcript_id=Rv0349 Chromosome ena exon 418949 419608 . + . Parent=transcript:Rv0349;Name=Rv0349-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0349-1;rank=1 Chromosome ena CDS 418949 419608 . + 0 ID=CDS:Rv0349;Parent=transcript:Rv0349;protein_id=Rv0349 ### -Chromosome ena gene 419835 421712 . + . ID=gene:Rv0350;Name=dnaK;biotype=protein_coding;description=Probable chaperone protein DnaK (heat shock protein 70) (heat shock 70 kDa protein) (HSP70);gene_id=Rv0350;logic_name=ena +Chromosome ena gene 419835 421712 . + . ID=gene:Rv0350;Name=dnaK;biotype=protein_coding;description=Probable chaperone protein DnaK (heat shock protein 70) (heat shock 70 kDa protein) (HSP70);gene_id=Rv0350;logic_name=ena Chromosome ena mRNA 419835 421712 . + . ID=transcript:Rv0350;Parent=gene:Rv0350;Name=dnaK-1;biotype=protein_coding;transcript_id=Rv0350 Chromosome ena exon 419835 421712 . + . Parent=transcript:Rv0350;Name=Rv0350-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0350-1;rank=1 Chromosome ena CDS 419835 421712 . + 0 ID=CDS:Rv0350;Parent=transcript:Rv0350;protein_id=Rv0350 ### -Chromosome ena gene 421709 422416 . + . ID=gene:Rv0351;Name=grpE;biotype=protein_coding;description=Probable GrpE protein (HSP-70 cofactor);gene_id=Rv0351;logic_name=ena +Chromosome ena gene 421709 422416 . + . ID=gene:Rv0351;Name=grpE;biotype=protein_coding;description=Probable GrpE protein (HSP-70 cofactor);gene_id=Rv0351;logic_name=ena Chromosome ena mRNA 421709 422416 . + . ID=transcript:Rv0351;Parent=gene:Rv0351;Name=grpE-1;biotype=protein_coding;transcript_id=Rv0351 Chromosome ena exon 421709 422416 . + . Parent=transcript:Rv0351;Name=Rv0351-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0351-1;rank=1 Chromosome ena CDS 421709 422416 . + 0 ID=CDS:Rv0351;Parent=transcript:Rv0351;protein_id=Rv0351 ### -Chromosome ena gene 422452 423639 . + . ID=gene:Rv0352;Name=dnaJ1;biotype=protein_coding;description=Probable chaperone protein DnaJ1;gene_id=Rv0352;logic_name=ena +Chromosome ena gene 422452 423639 . + . ID=gene:Rv0352;Name=dnaJ1;biotype=protein_coding;description=Probable chaperone protein DnaJ1;gene_id=Rv0352;logic_name=ena Chromosome ena mRNA 422452 423639 . + . ID=transcript:Rv0352;Parent=gene:Rv0352;Name=dnaJ1-1;biotype=protein_coding;transcript_id=Rv0352 Chromosome ena exon 422452 423639 . + . Parent=transcript:Rv0352;Name=Rv0352-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0352-1;rank=1 Chromosome ena CDS 422452 423639 . + 0 ID=CDS:Rv0352;Parent=transcript:Rv0352;protein_id=Rv0352 ### -Chromosome ena gene 423639 424019 . + . ID=gene:Rv0353;Name=hspR;biotype=protein_coding;description=Probable heat shock protein transcriptional repressor HspR (MerR family);gene_id=Rv0353;logic_name=ena +Chromosome ena gene 423639 424019 . + . ID=gene:Rv0353;Name=hspR;biotype=protein_coding;description=Probable heat shock protein transcriptional repressor HspR (MerR family);gene_id=Rv0353;logic_name=ena Chromosome ena mRNA 423639 424019 . + . ID=transcript:Rv0353;Parent=gene:Rv0353;Name=hspR-1;biotype=protein_coding;transcript_id=Rv0353 Chromosome ena exon 423639 424019 . + . Parent=transcript:Rv0353;Name=Rv0353-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0353-1;rank=1 Chromosome ena CDS 423639 424019 . + 0 ID=CDS:Rv0353;Parent=transcript:Rv0353;protein_id=Rv0353 ### -Chromosome ena gene 424269 424694 . - . ID=gene:Rv0354c;Name=PPE7;biotype=protein_coding;description=PPE family protein PPE7;gene_id=Rv0354c;logic_name=ena +Chromosome ena gene 424269 424694 . - . ID=gene:Rv0354c;Name=PPE7;biotype=protein_coding;description=PPE family protein PPE7;gene_id=Rv0354c;logic_name=ena Chromosome ena mRNA 424269 424694 . - . ID=transcript:Rv0354c;Parent=gene:Rv0354c;Name=PPE7-1;biotype=protein_coding;transcript_id=Rv0354c Chromosome ena exon 424269 424694 . - . Parent=transcript:Rv0354c;Name=Rv0354c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0354c-1;rank=1 Chromosome ena CDS 424269 424694 . - 0 ID=CDS:Rv0354c;Parent=transcript:Rv0354c;protein_id=Rv0354c ### -Chromosome ena gene 424777 434679 . - . ID=gene:Rv0355c;Name=PPE8;biotype=protein_coding;description=PPE family protein PPE8;gene_id=Rv0355c;logic_name=ena +Chromosome ena gene 424777 434679 . - . ID=gene:Rv0355c;Name=PPE8;biotype=protein_coding;description=PPE family protein PPE8;gene_id=Rv0355c;logic_name=ena Chromosome ena mRNA 424777 434679 . - . ID=transcript:Rv0355c;Parent=gene:Rv0355c;Name=PPE8-1;biotype=protein_coding;transcript_id=Rv0355c Chromosome ena exon 424777 434679 . - . Parent=transcript:Rv0355c;Name=Rv0355c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0355c-1;rank=1 Chromosome ena CDS 424777 434679 . - 0 ID=CDS:Rv0355c;Parent=transcript:Rv0355c;protein_id=Rv0355c ### -Chromosome ena gene 434830 435474 . - . ID=gene:Rv0356c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0356c;logic_name=ena +Chromosome ena gene 434830 435474 . - . ID=gene:Rv0356c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0356c;logic_name=ena Chromosome ena mRNA 434830 435474 . - . ID=transcript:Rv0356c;Parent=gene:Rv0356c;biotype=protein_coding;transcript_id=Rv0356c Chromosome ena exon 434830 435474 . - . Parent=transcript:Rv0356c;Name=Rv0356c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0356c-1;rank=1 Chromosome ena CDS 434830 435474 . - 0 ID=CDS:Rv0356c;Parent=transcript:Rv0356c;protein_id=Rv0356c ### -Chromosome ena gene 435471 436769 . - . ID=gene:Rv0357c;Name=purA;biotype=protein_coding;description=Probable adenylosuccinate synthetase PurA (imp--aspartate ligase) (ADSS) (ampsase);gene_id=Rv0357c;logic_name=ena +Chromosome ena gene 435471 436769 . - . ID=gene:Rv0357c;Name=purA;biotype=protein_coding;description=Probable adenylosuccinate synthetase PurA (imp--aspartate ligase) (ADSS) (ampsase);gene_id=Rv0357c;logic_name=ena Chromosome ena mRNA 435471 436769 . - . ID=transcript:Rv0357c;Parent=gene:Rv0357c;Name=purA-1;biotype=protein_coding;transcript_id=Rv0357c Chromosome ena exon 435471 436769 . - . Parent=transcript:Rv0357c;Name=Rv0357c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0357c-1;rank=1 Chromosome ena CDS 435471 436769 . - 0 ID=CDS:Rv0357c;Parent=transcript:Rv0357c;protein_id=Rv0357c ### -Chromosome ena gene 436860 437507 . + . ID=gene:Rv0358;biotype=protein_coding;description=Conserved protein;gene_id=Rv0358;logic_name=ena +Chromosome ena gene 436860 437507 . + . ID=gene:Rv0358;biotype=protein_coding;description=Conserved protein;gene_id=Rv0358;logic_name=ena Chromosome ena mRNA 436860 437507 . + . ID=transcript:Rv0358;Parent=gene:Rv0358;biotype=protein_coding;transcript_id=Rv0358 Chromosome ena exon 436860 437507 . + . Parent=transcript:Rv0358;Name=Rv0358-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0358-1;rank=1 Chromosome ena CDS 436860 437507 . + 0 ID=CDS:Rv0358;Parent=transcript:Rv0358;protein_id=Rv0358 ### -Chromosome ena gene 437518 438297 . + . ID=gene:Rv0359;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0359;logic_name=ena +Chromosome ena gene 437518 438297 . + . ID=gene:Rv0359;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0359;logic_name=ena Chromosome ena mRNA 437518 438297 . + . ID=transcript:Rv0359;Parent=gene:Rv0359;biotype=protein_coding;transcript_id=Rv0359 Chromosome ena exon 437518 438297 . + . Parent=transcript:Rv0359;Name=Rv0359-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0359-1;rank=1 Chromosome ena CDS 437518 438297 . + 0 ID=CDS:Rv0359;Parent=transcript:Rv0359;protein_id=Rv0359 ### -Chromosome ena gene 438302 438739 . - . ID=gene:Rv0360c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0360c;logic_name=ena +Chromosome ena gene 438302 438739 . - . ID=gene:Rv0360c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0360c;logic_name=ena Chromosome ena mRNA 438302 438739 . - . ID=transcript:Rv0360c;Parent=gene:Rv0360c;biotype=protein_coding;transcript_id=Rv0360c Chromosome ena exon 438302 438739 . - . Parent=transcript:Rv0360c;Name=Rv0360c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0360c-1;rank=1 Chromosome ena CDS 438302 438739 . - 0 ID=CDS:Rv0360c;Parent=transcript:Rv0360c;protein_id=Rv0360c ### -Chromosome ena gene 438822 439649 . + . ID=gene:Rv0361;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0361;logic_name=ena +Chromosome ena gene 438822 439649 . + . ID=gene:Rv0361;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0361;logic_name=ena Chromosome ena mRNA 438822 439649 . + . ID=transcript:Rv0361;Parent=gene:Rv0361;biotype=protein_coding;transcript_id=Rv0361 Chromosome ena exon 438822 439649 . + . Parent=transcript:Rv0361;Name=Rv0361-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0361-1;rank=1 Chromosome ena CDS 438822 439649 . + 0 ID=CDS:Rv0361;Parent=transcript:Rv0361;protein_id=Rv0361 ### -Chromosome ena gene 439871 441253 . + . ID=gene:Rv0362;Name=mgtE;biotype=protein_coding;description=Possible Mg2+ transport transmembrane protein MgtE;gene_id=Rv0362;logic_name=ena +Chromosome ena gene 439871 441253 . + . ID=gene:Rv0362;Name=mgtE;biotype=protein_coding;description=Possible Mg2+ transport transmembrane protein MgtE;gene_id=Rv0362;logic_name=ena Chromosome ena mRNA 439871 441253 . + . ID=transcript:Rv0362;Parent=gene:Rv0362;Name=mgtE-1;biotype=protein_coding;transcript_id=Rv0362 Chromosome ena exon 439871 441253 . + . Parent=transcript:Rv0362;Name=Rv0362-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0362-1;rank=1 Chromosome ena CDS 439871 441253 . + 0 ID=CDS:Rv0362;Parent=transcript:Rv0362;protein_id=Rv0362 ### -Chromosome ena gene 441265 442299 . - . ID=gene:Rv0363c;Name=fba;biotype=protein_coding;description=Probable fructose-bisphosphate aldolase Fba;gene_id=Rv0363c;logic_name=ena +Chromosome ena gene 441265 442299 . - . ID=gene:Rv0363c;Name=fba;biotype=protein_coding;description=Probable fructose-bisphosphate aldolase Fba;gene_id=Rv0363c;logic_name=ena Chromosome ena mRNA 441265 442299 . - . ID=transcript:Rv0363c;Parent=gene:Rv0363c;Name=fba-1;biotype=protein_coding;transcript_id=Rv0363c Chromosome ena exon 441265 442299 . - . Parent=transcript:Rv0363c;Name=Rv0363c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0363c-1;rank=1 Chromosome ena CDS 441265 442299 . - 0 ID=CDS:Rv0363c;Parent=transcript:Rv0363c;protein_id=Rv0363c ### -Chromosome ena gene 442395 443078 . + . ID=gene:Rv0364;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0364;logic_name=ena +Chromosome ena gene 442395 443078 . + . ID=gene:Rv0364;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0364;logic_name=ena Chromosome ena mRNA 442395 443078 . + . ID=transcript:Rv0364;Parent=gene:Rv0364;biotype=protein_coding;transcript_id=Rv0364 Chromosome ena exon 442395 443078 . + . Parent=transcript:Rv0364;Name=Rv0364-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0364-1;rank=1 Chromosome ena CDS 442395 443078 . + 0 ID=CDS:Rv0364;Parent=transcript:Rv0364;protein_id=Rv0364 ### -Chromosome ena gene 443067 444197 . - . ID=gene:Rv0365c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0365c;logic_name=ena +Chromosome ena gene 443067 444197 . - . ID=gene:Rv0365c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0365c;logic_name=ena Chromosome ena mRNA 443067 444197 . - . ID=transcript:Rv0365c;Parent=gene:Rv0365c;biotype=protein_coding;transcript_id=Rv0365c Chromosome ena exon 443067 444197 . - . Parent=transcript:Rv0365c;Name=Rv0365c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0365c-1;rank=1 Chromosome ena CDS 443067 444197 . - 0 ID=CDS:Rv0365c;Parent=transcript:Rv0365c;protein_id=Rv0365c ### -Chromosome ena gene 444222 444815 . - . ID=gene:Rv0366c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0366c;logic_name=ena +Chromosome ena gene 444222 444815 . - . ID=gene:Rv0366c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0366c;logic_name=ena Chromosome ena mRNA 444222 444815 . - . ID=transcript:Rv0366c;Parent=gene:Rv0366c;biotype=protein_coding;transcript_id=Rv0366c Chromosome ena exon 444222 444815 . - . Parent=transcript:Rv0366c;Name=Rv0366c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0366c-1;rank=1 Chromosome ena CDS 444222 444815 . - 0 ID=CDS:Rv0366c;Parent=transcript:Rv0366c;protein_id=Rv0366c ### -Chromosome ena gene 444844 445233 . - . ID=gene:Rv0367c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0367c;logic_name=ena +Chromosome ena gene 444844 445233 . - . ID=gene:Rv0367c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0367c;logic_name=ena Chromosome ena mRNA 444844 445233 . - . ID=transcript:Rv0367c;Parent=gene:Rv0367c;biotype=protein_coding;transcript_id=Rv0367c Chromosome ena exon 444844 445233 . - . Parent=transcript:Rv0367c;Name=Rv0367c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0367c-1;rank=1 Chromosome ena CDS 444844 445233 . - 0 ID=CDS:Rv0367c;Parent=transcript:Rv0367c;protein_id=Rv0367c ### -Chromosome ena gene 445314 446525 . - . ID=gene:Rv0368c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0368c;logic_name=ena +Chromosome ena gene 445314 446525 . - . ID=gene:Rv0368c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0368c;logic_name=ena Chromosome ena mRNA 445314 446525 . - . ID=transcript:Rv0368c;Parent=gene:Rv0368c;biotype=protein_coding;transcript_id=Rv0368c Chromosome ena exon 445314 446525 . - . Parent=transcript:Rv0368c;Name=Rv0368c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0368c-1;rank=1 Chromosome ena CDS 445314 446525 . - 0 ID=CDS:Rv0368c;Parent=transcript:Rv0368c;protein_id=Rv0368c ### -Chromosome ena gene 446531 447046 . - . ID=gene:Rv0369c;biotype=protein_coding;description=Possible membrane oxidoreductase;gene_id=Rv0369c;logic_name=ena +Chromosome ena gene 446531 447046 . - . ID=gene:Rv0369c;biotype=protein_coding;description=Possible membrane oxidoreductase;gene_id=Rv0369c;logic_name=ena Chromosome ena mRNA 446531 447046 . - . ID=transcript:Rv0369c;Parent=gene:Rv0369c;biotype=protein_coding;transcript_id=Rv0369c Chromosome ena exon 446531 447046 . - . Parent=transcript:Rv0369c;Name=Rv0369c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0369c-1;rank=1 Chromosome ena CDS 446531 447046 . - 0 ID=CDS:Rv0369c;Parent=transcript:Rv0369c;protein_id=Rv0369c ### -Chromosome ena gene 447147 448043 . - . ID=gene:Rv0370c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0370c;logic_name=ena +Chromosome ena gene 447147 448043 . - . ID=gene:Rv0370c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0370c;logic_name=ena Chromosome ena mRNA 447147 448043 . - . ID=transcript:Rv0370c;Parent=gene:Rv0370c;biotype=protein_coding;transcript_id=Rv0370c Chromosome ena exon 447147 448043 . - . Parent=transcript:Rv0370c;Name=Rv0370c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0370c-1;rank=1 Chromosome ena CDS 447147 448043 . - 0 ID=CDS:Rv0370c;Parent=transcript:Rv0370c;protein_id=Rv0370c ### -Chromosome ena gene 448040 448633 . - . ID=gene:Rv0371c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0371c;logic_name=ena +Chromosome ena gene 448040 448633 . - . ID=gene:Rv0371c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0371c;logic_name=ena Chromosome ena mRNA 448040 448633 . - . ID=transcript:Rv0371c;Parent=gene:Rv0371c;biotype=protein_coding;transcript_id=Rv0371c Chromosome ena exon 448040 448633 . - . Parent=transcript:Rv0371c;Name=Rv0371c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0371c-1;rank=1 Chromosome ena CDS 448040 448633 . - 0 ID=CDS:Rv0371c;Parent=transcript:Rv0371c;protein_id=Rv0371c ### -Chromosome ena gene 448630 449385 . - . ID=gene:Rv0372c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0372c;logic_name=ena +Chromosome ena gene 448630 449385 . - . ID=gene:Rv0372c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0372c;logic_name=ena Chromosome ena mRNA 448630 449385 . - . ID=transcript:Rv0372c;Parent=gene:Rv0372c;biotype=protein_coding;transcript_id=Rv0372c Chromosome ena exon 448630 449385 . - . Parent=transcript:Rv0372c;Name=Rv0372c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0372c-1;rank=1 Chromosome ena CDS 448630 449385 . - 0 ID=CDS:Rv0372c;Parent=transcript:Rv0372c;protein_id=Rv0372c ### -Chromosome ena gene 449404 451803 . - . ID=gene:Rv0373c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (large chain);gene_id=Rv0373c;logic_name=ena +Chromosome ena gene 449404 451803 . - . ID=gene:Rv0373c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (large chain);gene_id=Rv0373c;logic_name=ena Chromosome ena mRNA 449404 451803 . - . ID=transcript:Rv0373c;Parent=gene:Rv0373c;biotype=protein_coding;transcript_id=Rv0373c Chromosome ena exon 449404 451803 . - . Parent=transcript:Rv0373c;Name=Rv0373c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0373c-1;rank=1 Chromosome ena CDS 449404 451803 . - 0 ID=CDS:Rv0373c;Parent=transcript:Rv0373c;protein_id=Rv0373c ### -Chromosome ena gene 451800 452279 . - . ID=gene:Rv0374c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (small chain);gene_id=Rv0374c;logic_name=ena +Chromosome ena gene 451800 452279 . - . ID=gene:Rv0374c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (small chain);gene_id=Rv0374c;logic_name=ena Chromosome ena mRNA 451800 452279 . - . ID=transcript:Rv0374c;Parent=gene:Rv0374c;biotype=protein_coding;transcript_id=Rv0374c Chromosome ena exon 451800 452279 . - . Parent=transcript:Rv0374c;Name=Rv0374c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0374c-1;rank=1 Chromosome ena CDS 451800 452279 . - 0 ID=CDS:Rv0374c;Parent=transcript:Rv0374c;protein_id=Rv0374c ### -Chromosome ena gene 452294 453154 . - . ID=gene:Rv0375c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (medium chain);gene_id=Rv0375c;logic_name=ena +Chromosome ena gene 452294 453154 . - . ID=gene:Rv0375c;biotype=protein_coding;description=Probable carbon monoxyde dehydrogenase (medium chain);gene_id=Rv0375c;logic_name=ena Chromosome ena mRNA 452294 453154 . - . ID=transcript:Rv0375c;Parent=gene:Rv0375c;biotype=protein_coding;transcript_id=Rv0375c Chromosome ena exon 452294 453154 . - . Parent=transcript:Rv0375c;Name=Rv0375c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0375c-1;rank=1 Chromosome ena CDS 452294 453154 . - 0 ID=CDS:Rv0375c;Parent=transcript:Rv0375c;protein_id=Rv0375c ### -Chromosome ena gene 453230 454372 . - . ID=gene:Rv0376c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0376c;logic_name=ena +Chromosome ena gene 453230 454372 . - . ID=gene:Rv0376c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0376c;logic_name=ena Chromosome ena mRNA 453230 454372 . - . ID=transcript:Rv0376c;Parent=gene:Rv0376c;biotype=protein_coding;transcript_id=Rv0376c Chromosome ena exon 453230 454372 . - . Parent=transcript:Rv0376c;Name=Rv0376c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0376c-1;rank=1 Chromosome ena CDS 453230 454372 . - 0 ID=CDS:Rv0376c;Parent=transcript:Rv0376c;protein_id=Rv0376c ### -Chromosome ena gene 454421 455386 . + . ID=gene:Rv0377;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LysR-family);gene_id=Rv0377;logic_name=ena +Chromosome ena gene 454421 455386 . + . ID=gene:Rv0377;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LysR-family);gene_id=Rv0377;logic_name=ena Chromosome ena mRNA 454421 455386 . + . ID=transcript:Rv0377;Parent=gene:Rv0377;biotype=protein_coding;transcript_id=Rv0377 Chromosome ena exon 454421 455386 . + . Parent=transcript:Rv0377;Name=Rv0377-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0377-1;rank=1 Chromosome ena CDS 454421 455386 . + 0 ID=CDS:Rv0377;Parent=transcript:Rv0377;protein_id=Rv0377 ### -Chromosome ena gene 455637 455858 . + . ID=gene:Rv0378;biotype=protein_coding;description=Conserved hypothetical glycine rich protein;gene_id=Rv0378;logic_name=ena +Chromosome ena gene 455637 455858 . + . ID=gene:Rv0378;biotype=protein_coding;description=Conserved hypothetical glycine rich protein;gene_id=Rv0378;logic_name=ena Chromosome ena mRNA 455637 455858 . + . ID=transcript:Rv0378;Parent=gene:Rv0378;biotype=protein_coding;transcript_id=Rv0378 Chromosome ena exon 455637 455858 . + . Parent=transcript:Rv0378;Name=Rv0378-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0378-1;rank=1 Chromosome ena CDS 455637 455858 . + 0 ID=CDS:Rv0378;Parent=transcript:Rv0378;protein_id=Rv0378 ### -Chromosome ena gene 455977 456192 . + . ID=gene:Rv0379;Name=secE2;biotype=protein_coding;description=Possible protein transport protein SecE2;gene_id=Rv0379;logic_name=ena +Chromosome ena gene 455977 456192 . + . ID=gene:Rv0379;Name=secE2;biotype=protein_coding;description=Possible protein transport protein SecE2;gene_id=Rv0379;logic_name=ena Chromosome ena mRNA 455977 456192 . + . ID=transcript:Rv0379;Parent=gene:Rv0379;Name=secE2-1;biotype=protein_coding;transcript_id=Rv0379 Chromosome ena exon 455977 456192 . + . Parent=transcript:Rv0379;Name=Rv0379-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0379-1;rank=1 Chromosome ena CDS 455977 456192 . + 0 ID=CDS:Rv0379;Parent=transcript:Rv0379;protein_id=Rv0379 ### -Chromosome ena gene 456268 456819 . - . ID=gene:Rv0380c;biotype=protein_coding;description=Possible RNA methyltransferase (RNA methylase);gene_id=Rv0380c;logic_name=ena +Chromosome ena gene 456268 456819 . - . ID=gene:Rv0380c;biotype=protein_coding;description=Possible RNA methyltransferase (RNA methylase);gene_id=Rv0380c;logic_name=ena Chromosome ena mRNA 456268 456819 . - . ID=transcript:Rv0380c;Parent=gene:Rv0380c;biotype=protein_coding;transcript_id=Rv0380c Chromosome ena exon 456268 456819 . - . Parent=transcript:Rv0380c;Name=Rv0380c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0380c-1;rank=1 Chromosome ena CDS 456268 456819 . - 0 ID=CDS:Rv0380c;Parent=transcript:Rv0380c;protein_id=Rv0380c ### -Chromosome ena gene 456915 457823 . - . ID=gene:Rv0381c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0381c;logic_name=ena +Chromosome ena gene 456915 457823 . - . ID=gene:Rv0381c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0381c;logic_name=ena Chromosome ena mRNA 456915 457823 . - . ID=transcript:Rv0381c;Parent=gene:Rv0381c;biotype=protein_coding;transcript_id=Rv0381c Chromosome ena exon 456915 457823 . - . Parent=transcript:Rv0381c;Name=Rv0381c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0381c-1;rank=1 Chromosome ena CDS 456915 457823 . - 0 ID=CDS:Rv0381c;Parent=transcript:Rv0381c;protein_id=Rv0381c ### -Chromosome ena gene 457841 458380 . - . ID=gene:Rv0382c;Name=pyrE;biotype=protein_coding;description=Probable orotate phosphoribosyltransferase PyrE (OPRT) (oprtase);gene_id=Rv0382c;logic_name=ena +Chromosome ena gene 457841 458380 . - . ID=gene:Rv0382c;Name=pyrE;biotype=protein_coding;description=Probable orotate phosphoribosyltransferase PyrE (OPRT) (oprtase);gene_id=Rv0382c;logic_name=ena Chromosome ena mRNA 457841 458380 . - . ID=transcript:Rv0382c;Parent=gene:Rv0382c;Name=pyrE-1;biotype=protein_coding;transcript_id=Rv0382c Chromosome ena exon 457841 458380 . - . Parent=transcript:Rv0382c;Name=Rv0382c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0382c-1;rank=1 Chromosome ena CDS 457841 458380 . - 0 ID=CDS:Rv0382c;Parent=transcript:Rv0382c;protein_id=Rv0382c ### -Chromosome ena gene 458461 459315 . - . ID=gene:Rv0383c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0383c;logic_name=ena +Chromosome ena gene 458461 459315 . - . ID=gene:Rv0383c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0383c;logic_name=ena Chromosome ena mRNA 458461 459315 . - . ID=transcript:Rv0383c;Parent=gene:Rv0383c;biotype=protein_coding;transcript_id=Rv0383c Chromosome ena exon 458461 459315 . - . Parent=transcript:Rv0383c;Name=Rv0383c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0383c-1;rank=1 Chromosome ena CDS 458461 459315 . - 0 ID=CDS:Rv0383c;Parent=transcript:Rv0383c;protein_id=Rv0383c ### -Chromosome ena gene 459456 462002 . - . ID=gene:Rv0384c;Name=clpB;biotype=protein_coding;description=Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1);gene_id=Rv0384c;logic_name=ena +Chromosome ena gene 459456 462002 . - . ID=gene:Rv0384c;Name=clpB;biotype=protein_coding;description=Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1);gene_id=Rv0384c;logic_name=ena Chromosome ena mRNA 459456 462002 . - . ID=transcript:Rv0384c;Parent=gene:Rv0384c;Name=clpB-1;biotype=protein_coding;transcript_id=Rv0384c Chromosome ena exon 459456 462002 . - . Parent=transcript:Rv0384c;Name=Rv0384c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0384c-1;rank=1 Chromosome ena CDS 459456 462002 . - 0 ID=CDS:Rv0384c;Parent=transcript:Rv0384c;protein_id=Rv0384c ### -Chromosome ena gene 462135 463307 . + . ID=gene:Rv0385;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0385;logic_name=ena +Chromosome ena gene 462135 463307 . + . ID=gene:Rv0385;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0385;logic_name=ena Chromosome ena mRNA 462135 463307 . + . ID=transcript:Rv0385;Parent=gene:Rv0385;biotype=protein_coding;transcript_id=Rv0385 Chromosome ena exon 462135 463307 . + . Parent=transcript:Rv0385;Name=Rv0385-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0385-1;rank=1 Chromosome ena CDS 462135 463307 . + 0 ID=CDS:Rv0385;Parent=transcript:Rv0385;protein_id=Rv0385 ### -Chromosome ena gene 463411 466668 . + . ID=gene:Rv0386;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LuxR/UhpA-family);gene_id=Rv0386;logic_name=ena +Chromosome ena gene 463411 466668 . + . ID=gene:Rv0386;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LuxR/UhpA-family);gene_id=Rv0386;logic_name=ena Chromosome ena mRNA 463411 466668 . + . ID=transcript:Rv0386;Parent=gene:Rv0386;biotype=protein_coding;transcript_id=Rv0386 Chromosome ena exon 463411 466668 . + . Parent=transcript:Rv0386;Name=Rv0386-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0386-1;rank=1 Chromosome ena CDS 463411 466668 . + 0 ID=CDS:Rv0386;Parent=transcript:Rv0386;protein_id=Rv0386 ### -Chromosome ena gene 466672 467406 . - . ID=gene:Rv0387c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0387c;logic_name=ena +Chromosome ena gene 466672 467406 . - . ID=gene:Rv0387c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0387c;logic_name=ena Chromosome ena mRNA 466672 467406 . - . ID=transcript:Rv0387c;Parent=gene:Rv0387c;biotype=protein_coding;transcript_id=Rv0387c Chromosome ena exon 466672 467406 . - . Parent=transcript:Rv0387c;Name=Rv0387c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0387c-1;rank=1 Chromosome ena CDS 466672 467406 . - 0 ID=CDS:Rv0387c;Parent=transcript:Rv0387c;protein_id=Rv0387c ### -Chromosome ena gene 467459 468001 . - . ID=gene:Rv0388c;Name=PPE9;biotype=protein_coding;description=PPE family protein PPE9;gene_id=Rv0388c;logic_name=ena +Chromosome ena gene 467459 468001 . - . ID=gene:Rv0388c;Name=PPE9;biotype=protein_coding;description=PPE family protein PPE9;gene_id=Rv0388c;logic_name=ena Chromosome ena mRNA 467459 468001 . - . ID=transcript:Rv0388c;Parent=gene:Rv0388c;Name=PPE9-1;biotype=protein_coding;transcript_id=Rv0388c Chromosome ena exon 467459 468001 . - . Parent=transcript:Rv0388c;Name=Rv0388c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0388c-1;rank=1 Chromosome ena CDS 467459 468001 . - 0 ID=CDS:Rv0388c;Parent=transcript:Rv0388c;protein_id=Rv0388c ### -Chromosome ena gene 468335 469594 . + . ID=gene:Rv0389;Name=purT;biotype=protein_coding;description=Probable phosphoribosylglycinamide formyltransferase 2 PurT (GART 2) (gar transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (formate-dependent gar transformylase);gene_id=Rv0389;logic_name=ena +Chromosome ena gene 468335 469594 . + . ID=gene:Rv0389;Name=purT;biotype=protein_coding;description=Probable phosphoribosylglycinamide formyltransferase 2 PurT (GART 2) (gar transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (formate-dependent gar transformylase);gene_id=Rv0389;logic_name=ena Chromosome ena mRNA 468335 469594 . + . ID=transcript:Rv0389;Parent=gene:Rv0389;Name=purT-1;biotype=protein_coding;transcript_id=Rv0389 Chromosome ena exon 468335 469594 . + . Parent=transcript:Rv0389;Name=Rv0389-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0389-1;rank=1 Chromosome ena CDS 468335 469594 . + 0 ID=CDS:Rv0389;Parent=transcript:Rv0389;protein_id=Rv0389 ### -Chromosome ena gene 469591 470013 . + . ID=gene:Rv0390;biotype=protein_coding;description=Conserved protein;gene_id=Rv0390;logic_name=ena +Chromosome ena gene 469591 470013 . + . ID=gene:Rv0390;biotype=protein_coding;description=Conserved protein;gene_id=Rv0390;logic_name=ena Chromosome ena mRNA 469591 470013 . + . ID=transcript:Rv0390;Parent=gene:Rv0390;biotype=protein_coding;transcript_id=Rv0390 Chromosome ena exon 469591 470013 . + . Parent=transcript:Rv0390;Name=Rv0390-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0390-1;rank=1 Chromosome ena CDS 469591 470013 . + 0 ID=CDS:Rv0390;Parent=transcript:Rv0390;protein_id=Rv0390 ### -Chromosome ena gene 470010 471230 . + . ID=gene:Rv0391;Name=metZ;biotype=protein_coding;description=Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase);gene_id=Rv0391;logic_name=ena +Chromosome ena gene 470010 471230 . + . ID=gene:Rv0391;Name=metZ;biotype=protein_coding;description=Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase);gene_id=Rv0391;logic_name=ena Chromosome ena mRNA 470010 471230 . + . ID=transcript:Rv0391;Parent=gene:Rv0391;Name=metZ-1;biotype=protein_coding;transcript_id=Rv0391 Chromosome ena exon 470010 471230 . + . Parent=transcript:Rv0391;Name=Rv0391-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0391-1;rank=1 Chromosome ena CDS 470010 471230 . + 0 ID=CDS:Rv0391;Parent=transcript:Rv0391;protein_id=Rv0391 ### -Chromosome ena gene 471227 472639 . - . ID=gene:Rv0392c;Name=ndhA;biotype=protein_coding;description=Probable membrane NADH dehydrogenase NdhA;gene_id=Rv0392c;logic_name=ena +Chromosome ena gene 471227 472639 . - . ID=gene:Rv0392c;Name=ndhA;biotype=protein_coding;description=Probable membrane NADH dehydrogenase NdhA;gene_id=Rv0392c;logic_name=ena Chromosome ena mRNA 471227 472639 . - . ID=transcript:Rv0392c;Parent=gene:Rv0392c;Name=ndhA-1;biotype=protein_coding;transcript_id=Rv0392c Chromosome ena exon 471227 472639 . - . Parent=transcript:Rv0392c;Name=Rv0392c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0392c-1;rank=1 Chromosome ena CDS 471227 472639 . - 0 ID=CDS:Rv0392c;Parent=transcript:Rv0392c;protein_id=Rv0392c ### -Chromosome ena gene 472781 474106 . + . ID=gene:Rv0393;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0393;logic_name=ena +Chromosome ena gene 472781 474106 . + . ID=gene:Rv0393;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0393;logic_name=ena Chromosome ena mRNA 472781 474106 . + . ID=transcript:Rv0393;Parent=gene:Rv0393;biotype=protein_coding;transcript_id=Rv0393 Chromosome ena exon 472781 474106 . + . Parent=transcript:Rv0393;Name=Rv0393-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0393-1;rank=1 Chromosome ena CDS 472781 474106 . + 0 ID=CDS:Rv0393;Parent=transcript:Rv0393;protein_id=Rv0393 ### -Chromosome ena gene 474122 474841 . - . ID=gene:Rv0394c;biotype=protein_coding;description=Possible secreted protein;gene_id=Rv0394c;logic_name=ena +Chromosome ena gene 474122 474841 . - . ID=gene:Rv0394c;biotype=protein_coding;description=Possible secreted protein;gene_id=Rv0394c;logic_name=ena Chromosome ena mRNA 474122 474841 . - . ID=transcript:Rv0394c;Parent=gene:Rv0394c;biotype=protein_coding;transcript_id=Rv0394c Chromosome ena exon 474122 474841 . - . Parent=transcript:Rv0394c;Name=Rv0394c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0394c-1;rank=1 Chromosome ena CDS 474122 474841 . - 0 ID=CDS:Rv0394c;Parent=transcript:Rv0394c;protein_id=Rv0394c ### -Chromosome ena gene 474940 475344 . + . ID=gene:Rv0395;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0395;logic_name=ena +Chromosome ena gene 474940 475344 . + . ID=gene:Rv0395;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0395;logic_name=ena Chromosome ena mRNA 474940 475344 . + . ID=transcript:Rv0395;Parent=gene:Rv0395;biotype=protein_coding;transcript_id=Rv0395 Chromosome ena exon 474940 475344 . + . Parent=transcript:Rv0395;Name=Rv0395-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0395-1;rank=1 Chromosome ena CDS 474940 475344 . + 0 ID=CDS:Rv0395;Parent=transcript:Rv0395;protein_id=Rv0395 ### -Chromosome ena gene 475350 475742 . + . ID=gene:Rv0396;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0396;logic_name=ena +Chromosome ena gene 475350 475742 . + . ID=gene:Rv0396;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0396;logic_name=ena Chromosome ena mRNA 475350 475742 . + . ID=transcript:Rv0396;Parent=gene:Rv0396;biotype=protein_coding;transcript_id=Rv0396 Chromosome ena exon 475350 475742 . + . Parent=transcript:Rv0396;Name=Rv0396-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0396-1;rank=1 Chromosome ena CDS 475350 475742 . + 0 ID=CDS:Rv0396;Parent=transcript:Rv0396;protein_id=Rv0396 ### -Chromosome ena gene 475816 476184 . + . ID=gene:Rv0397;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0397;logic_name=ena +Chromosome ena gene 475816 476184 . + . ID=gene:Rv0397;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0397;logic_name=ena Chromosome ena mRNA 475816 476184 . + . ID=transcript:Rv0397;Parent=gene:Rv0397;biotype=protein_coding;transcript_id=Rv0397 Chromosome ena exon 475816 476184 . + . Parent=transcript:Rv0397;Name=Rv0397-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0397-1;rank=1 Chromosome ena CDS 475816 476184 . + 0 ID=CDS:Rv0397;Parent=transcript:Rv0397;protein_id=Rv0397 ### -Chromosome ena gene 476394 476642 . + . ID=gene:Rv0397A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0397A;logic_name=ena +Chromosome ena gene 476394 476642 . + . ID=gene:Rv0397A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0397A;logic_name=ena Chromosome ena mRNA 476394 476642 . + . ID=transcript:Rv0397A;Parent=gene:Rv0397A;biotype=protein_coding;transcript_id=Rv0397A Chromosome ena exon 476394 476642 . + . Parent=transcript:Rv0397A;Name=Rv0397A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0397A-1;rank=1 Chromosome ena CDS 476394 476642 . + 0 ID=CDS:Rv0397A;Parent=transcript:Rv0397A;protein_id=Rv0397A ### -Chromosome ena gene 476679 477320 . - . ID=gene:Rv0398c;biotype=protein_coding;description=Possible secreted protein;gene_id=Rv0398c;logic_name=ena +Chromosome ena gene 476679 477320 . - . ID=gene:Rv0398c;biotype=protein_coding;description=Possible secreted protein;gene_id=Rv0398c;logic_name=ena Chromosome ena mRNA 476679 477320 . - . ID=transcript:Rv0398c;Parent=gene:Rv0398c;biotype=protein_coding;transcript_id=Rv0398c Chromosome ena exon 476679 477320 . - . Parent=transcript:Rv0398c;Name=Rv0398c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0398c-1;rank=1 Chromosome ena CDS 476679 477320 . - 0 ID=CDS:Rv0398c;Parent=transcript:Rv0398c;protein_id=Rv0398c ### -Chromosome ena gene 477327 478556 . - . ID=gene:Rv0399c;Name=lpqK;biotype=protein_coding;description=Possible conserved lipoprotein LpqK;gene_id=Rv0399c;logic_name=ena +Chromosome ena gene 477327 478556 . - . ID=gene:Rv0399c;Name=lpqK;biotype=protein_coding;description=Possible conserved lipoprotein LpqK;gene_id=Rv0399c;logic_name=ena Chromosome ena mRNA 477327 478556 . - . ID=transcript:Rv0399c;Parent=gene:Rv0399c;Name=lpqK-1;biotype=protein_coding;transcript_id=Rv0399c Chromosome ena exon 477327 478556 . - . Parent=transcript:Rv0399c;Name=Rv0399c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0399c-1;rank=1 Chromosome ena CDS 477327 478556 . - 0 ID=CDS:Rv0399c;Parent=transcript:Rv0399c;protein_id=Rv0399c ### -Chromosome ena gene 478566 479753 . - . ID=gene:Rv0400c;Name=fadE7;biotype=protein_coding;description=Acyl-CoA dehydrogenase FadE7;gene_id=Rv0400c;logic_name=ena +Chromosome ena gene 478566 479753 . - . ID=gene:Rv0400c;Name=fadE7;biotype=protein_coding;description=Acyl-CoA dehydrogenase FadE7;gene_id=Rv0400c;logic_name=ena Chromosome ena mRNA 478566 479753 . - . ID=transcript:Rv0400c;Parent=gene:Rv0400c;Name=fadE7-1;biotype=protein_coding;transcript_id=Rv0400c Chromosome ena exon 478566 479753 . - . Parent=transcript:Rv0400c;Name=Rv0400c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0400c-1;rank=1 Chromosome ena CDS 478566 479753 . - 0 ID=CDS:Rv0400c;Parent=transcript:Rv0400c;protein_id=Rv0400c ### -Chromosome ena gene 479789 480160 . + . ID=gene:Rv0401;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0401;logic_name=ena +Chromosome ena gene 479789 480160 . + . ID=gene:Rv0401;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0401;logic_name=ena Chromosome ena mRNA 479789 480160 . + . ID=transcript:Rv0401;Parent=gene:Rv0401;biotype=protein_coding;transcript_id=Rv0401 Chromosome ena exon 479789 480160 . + . Parent=transcript:Rv0401;Name=Rv0401-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0401-1;rank=1 Chromosome ena CDS 479789 480160 . + 0 ID=CDS:Rv0401;Parent=transcript:Rv0401;protein_id=Rv0401 ### -Chromosome ena gene 480355 483231 . - . ID=gene:Rv0402c;Name=mmpL1;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL1;gene_id=Rv0402c;logic_name=ena +Chromosome ena gene 480355 483231 . - . ID=gene:Rv0402c;Name=mmpL1;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL1;gene_id=Rv0402c;logic_name=ena Chromosome ena mRNA 480355 483231 . - . ID=transcript:Rv0402c;Parent=gene:Rv0402c;Name=mmpL1-1;biotype=protein_coding;transcript_id=Rv0402c Chromosome ena exon 480355 483231 . - . Parent=transcript:Rv0402c;Name=Rv0402c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0402c-1;rank=1 Chromosome ena CDS 480355 483231 . - 0 ID=CDS:Rv0402c;Parent=transcript:Rv0402c;protein_id=Rv0402c ### -Chromosome ena gene 483228 483656 . - . ID=gene:Rv0403c;Name=mmpS1;biotype=protein_coding;description=Probable conserved membrane protein MmpS1;gene_id=Rv0403c;logic_name=ena +Chromosome ena gene 483228 483656 . - . ID=gene:Rv0403c;Name=mmpS1;biotype=protein_coding;description=Probable conserved membrane protein MmpS1;gene_id=Rv0403c;logic_name=ena Chromosome ena mRNA 483228 483656 . - . ID=transcript:Rv0403c;Parent=gene:Rv0403c;Name=mmpS1-1;biotype=protein_coding;transcript_id=Rv0403c Chromosome ena exon 483228 483656 . - . Parent=transcript:Rv0403c;Name=Rv0403c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0403c-1;rank=1 Chromosome ena CDS 483228 483656 . - 0 ID=CDS:Rv0403c;Parent=transcript:Rv0403c;protein_id=Rv0403c ### -Chromosome ena gene 483977 485734 . + . ID=gene:Rv0404;Name=fadD30;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD30 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv0404;logic_name=ena +Chromosome ena gene 483977 485734 . + . ID=gene:Rv0404;Name=fadD30;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD30 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv0404;logic_name=ena Chromosome ena mRNA 483977 485734 . + . ID=transcript:Rv0404;Parent=gene:Rv0404;Name=fadD30-1;biotype=protein_coding;transcript_id=Rv0404 Chromosome ena exon 483977 485734 . + . Parent=transcript:Rv0404;Name=Rv0404-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0404-1;rank=1 Chromosome ena CDS 483977 485734 . + 0 ID=CDS:Rv0404;Parent=transcript:Rv0404;protein_id=Rv0404 ### -Chromosome ena gene 485731 489939 . + . ID=gene:Rv0405;Name=pks6;biotype=protein_coding;description=Probable membrane bound polyketide synthase Pks6;gene_id=Rv0405;logic_name=ena +Chromosome ena gene 485731 489939 . + . ID=gene:Rv0405;Name=pks6;biotype=protein_coding;description=Probable membrane bound polyketide synthase Pks6;gene_id=Rv0405;logic_name=ena Chromosome ena mRNA 485731 489939 . + . ID=transcript:Rv0405;Parent=gene:Rv0405;Name=pks6-1;biotype=protein_coding;transcript_id=Rv0405 Chromosome ena exon 485731 489939 . + . Parent=transcript:Rv0405;Name=Rv0405-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0405-1;rank=1 Chromosome ena CDS 485731 489939 . + 0 ID=CDS:Rv0405;Parent=transcript:Rv0405;protein_id=Rv0405 ### -Chromosome ena gene 489887 490705 . - . ID=gene:Rv0406c;biotype=protein_coding;description=Beta lactamase like protein;gene_id=Rv0406c;logic_name=ena +Chromosome ena gene 489887 490705 . - . ID=gene:Rv0406c;biotype=protein_coding;description=Beta lactamase like protein;gene_id=Rv0406c;logic_name=ena Chromosome ena mRNA 489887 490705 . - . ID=transcript:Rv0406c;Parent=gene:Rv0406c;biotype=protein_coding;transcript_id=Rv0406c Chromosome ena exon 489887 490705 . - . Parent=transcript:Rv0406c;Name=Rv0406c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0406c-1;rank=1 Chromosome ena CDS 489887 490705 . - 0 ID=CDS:Rv0406c;Parent=transcript:Rv0406c;protein_id=Rv0406c ### -Chromosome ena gene 490783 491793 . + . ID=gene:Rv0407;Name=fgd1;biotype=protein_coding;description=F420-dependent glucose-6-phosphate dehydrogenase Fgd1;gene_id=Rv0407;logic_name=ena +Chromosome ena gene 490783 491793 . + . ID=gene:Rv0407;Name=fgd1;biotype=protein_coding;description=F420-dependent glucose-6-phosphate dehydrogenase Fgd1;gene_id=Rv0407;logic_name=ena Chromosome ena mRNA 490783 491793 . + . ID=transcript:Rv0407;Parent=gene:Rv0407;Name=fgd1-1;biotype=protein_coding;transcript_id=Rv0407 Chromosome ena exon 490783 491793 . + . Parent=transcript:Rv0407;Name=Rv0407-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0407-1;rank=1 Chromosome ena CDS 490783 491793 . + 0 ID=CDS:Rv0407;Parent=transcript:Rv0407;protein_id=Rv0407 ### -Chromosome ena gene 491786 493858 . + . ID=gene:Rv0408;Name=pta;biotype=protein_coding;description=Probable phosphate acetyltransferase Pta (phosphotransacetylase);gene_id=Rv0408;logic_name=ena +Chromosome ena gene 491786 493858 . + . ID=gene:Rv0408;Name=pta;biotype=protein_coding;description=Probable phosphate acetyltransferase Pta (phosphotransacetylase);gene_id=Rv0408;logic_name=ena Chromosome ena mRNA 491786 493858 . + . ID=transcript:Rv0408;Parent=gene:Rv0408;Name=pta-1;biotype=protein_coding;transcript_id=Rv0408 Chromosome ena exon 491786 493858 . + . Parent=transcript:Rv0408;Name=Rv0408-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0408-1;rank=1 Chromosome ena CDS 491786 493858 . + 0 ID=CDS:Rv0408;Parent=transcript:Rv0408;protein_id=Rv0408 ### -Chromosome ena gene 493851 495008 . + . ID=gene:Rv0409;Name=ackA;biotype=protein_coding;description=Probable acetate kinase AckA (acetokinase);gene_id=Rv0409;logic_name=ena +Chromosome ena gene 493851 495008 . + . ID=gene:Rv0409;Name=ackA;biotype=protein_coding;description=Probable acetate kinase AckA (acetokinase);gene_id=Rv0409;logic_name=ena Chromosome ena mRNA 493851 495008 . + . ID=transcript:Rv0409;Parent=gene:Rv0409;Name=ackA-1;biotype=protein_coding;transcript_id=Rv0409 Chromosome ena exon 493851 495008 . + . Parent=transcript:Rv0409;Name=Rv0409-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0409-1;rank=1 Chromosome ena CDS 493851 495008 . + 0 ID=CDS:Rv0409;Parent=transcript:Rv0409;protein_id=Rv0409 ### -Chromosome ena gene 495062 497314 . - . ID=gene:Rv0410c;Name=pknG;biotype=protein_coding;description=Serine/threonine-protein kinase PknG (protein kinase G) (STPK G);gene_id=Rv0410c;logic_name=ena +Chromosome ena gene 495062 497314 . - . ID=gene:Rv0410c;Name=pknG;biotype=protein_coding;description=Serine/threonine-protein kinase PknG (protein kinase G) (STPK G);gene_id=Rv0410c;logic_name=ena Chromosome ena mRNA 495062 497314 . - . ID=transcript:Rv0410c;Parent=gene:Rv0410c;Name=pknG-1;biotype=protein_coding;transcript_id=Rv0410c Chromosome ena exon 495062 497314 . - . Parent=transcript:Rv0410c;Name=Rv0410c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0410c-1;rank=1 Chromosome ena CDS 495062 497314 . - 0 ID=CDS:Rv0410c;Parent=transcript:Rv0410c;protein_id=Rv0410c ### -Chromosome ena gene 497314 498300 . - . ID=gene:Rv0411c;Name=glnH;biotype=protein_coding;description=Probable glutamine-binding lipoprotein GlnH (GLNBP);gene_id=Rv0411c;logic_name=ena +Chromosome ena gene 497314 498300 . - . ID=gene:Rv0411c;Name=glnH;biotype=protein_coding;description=Probable glutamine-binding lipoprotein GlnH (GLNBP);gene_id=Rv0411c;logic_name=ena Chromosome ena mRNA 497314 498300 . - . ID=transcript:Rv0411c;Parent=gene:Rv0411c;Name=glnH-1;biotype=protein_coding;transcript_id=Rv0411c Chromosome ena exon 497314 498300 . - . Parent=transcript:Rv0411c;Name=Rv0411c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0411c-1;rank=1 Chromosome ena CDS 497314 498300 . - 0 ID=CDS:Rv0411c;Parent=transcript:Rv0411c;protein_id=Rv0411c ### -Chromosome ena gene 498300 499619 . - . ID=gene:Rv0412c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0412c;logic_name=ena +Chromosome ena gene 498300 499619 . - . ID=gene:Rv0412c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0412c;logic_name=ena Chromosome ena mRNA 498300 499619 . - . ID=transcript:Rv0412c;Parent=gene:Rv0412c;biotype=protein_coding;transcript_id=Rv0412c Chromosome ena exon 498300 499619 . - . Parent=transcript:Rv0412c;Name=Rv0412c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0412c-1;rank=1 Chromosome ena CDS 498300 499619 . - 0 ID=CDS:Rv0412c;Parent=transcript:Rv0412c;protein_id=Rv0412c ### -Chromosome ena gene 499713 500366 . + . ID=gene:Rv0413;Name=mutT3;biotype=protein_coding;description=Possible mutator protein MutT3 (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (dGTP pyrophosphohydrolase);gene_id=Rv0413;logic_name=ena +Chromosome ena gene 499713 500366 . + . ID=gene:Rv0413;Name=mutT3;biotype=protein_coding;description=Possible mutator protein MutT3 (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (dGTP pyrophosphohydrolase);gene_id=Rv0413;logic_name=ena Chromosome ena mRNA 499713 500366 . + . ID=transcript:Rv0413;Parent=gene:Rv0413;Name=mutT3-1;biotype=protein_coding;transcript_id=Rv0413 Chromosome ena exon 499713 500366 . + . Parent=transcript:Rv0413;Name=Rv0413-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0413-1;rank=1 Chromosome ena CDS 499713 500366 . + 0 ID=CDS:Rv0413;Parent=transcript:Rv0413;protein_id=Rv0413 ### -Chromosome ena gene 500350 501018 . - . ID=gene:Rv0414c;Name=thiE;biotype=protein_coding;description=Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase);gene_id=Rv0414c;logic_name=ena +Chromosome ena gene 500350 501018 . - . ID=gene:Rv0414c;Name=thiE;biotype=protein_coding;description=Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase);gene_id=Rv0414c;logic_name=ena Chromosome ena mRNA 500350 501018 . - . ID=transcript:Rv0414c;Parent=gene:Rv0414c;Name=thiE-1;biotype=protein_coding;transcript_id=Rv0414c Chromosome ena exon 500350 501018 . - . Parent=transcript:Rv0414c;Name=Rv0414c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0414c-1;rank=1 Chromosome ena CDS 500350 501018 . - 0 ID=CDS:Rv0414c;Parent=transcript:Rv0414c;protein_id=Rv0414c ### -Chromosome ena gene 501148 502170 . + . ID=gene:Rv0415;Name=thiO;biotype=protein_coding;description=Possible thiamine biosynthesis oxidoreductase ThiO;gene_id=Rv0415;logic_name=ena +Chromosome ena gene 501148 502170 . + . ID=gene:Rv0415;Name=thiO;biotype=protein_coding;description=Possible thiamine biosynthesis oxidoreductase ThiO;gene_id=Rv0415;logic_name=ena Chromosome ena mRNA 501148 502170 . + . ID=transcript:Rv0415;Parent=gene:Rv0415;Name=thiO-1;biotype=protein_coding;transcript_id=Rv0415 Chromosome ena exon 501148 502170 . + . Parent=transcript:Rv0415;Name=Rv0415-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0415-1;rank=1 Chromosome ena CDS 501148 502170 . + 0 ID=CDS:Rv0415;Parent=transcript:Rv0415;protein_id=Rv0415 ### -Chromosome ena gene 502167 502373 . + . ID=gene:Rv0416;Name=thiS;biotype=protein_coding;description=Possible protein ThiS;gene_id=Rv0416;logic_name=ena +Chromosome ena gene 502167 502373 . + . ID=gene:Rv0416;Name=thiS;biotype=protein_coding;description=Possible protein ThiS;gene_id=Rv0416;logic_name=ena Chromosome ena mRNA 502167 502373 . + . ID=transcript:Rv0416;Parent=gene:Rv0416;Name=thiS-1;biotype=protein_coding;transcript_id=Rv0416 Chromosome ena exon 502167 502373 . + . Parent=transcript:Rv0416;Name=Rv0416-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0416-1;rank=1 Chromosome ena CDS 502167 502373 . + 0 ID=CDS:Rv0416;Parent=transcript:Rv0416;protein_id=Rv0416 ### -Chromosome ena gene 502366 503124 . + . ID=gene:Rv0417;Name=thiG;biotype=protein_coding;description=Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein);gene_id=Rv0417;logic_name=ena +Chromosome ena gene 502366 503124 . + . ID=gene:Rv0417;Name=thiG;biotype=protein_coding;description=Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein);gene_id=Rv0417;logic_name=ena Chromosome ena mRNA 502366 503124 . + . ID=transcript:Rv0417;Parent=gene:Rv0417;Name=thiG-1;biotype=protein_coding;transcript_id=Rv0417 Chromosome ena exon 502366 503124 . + . Parent=transcript:Rv0417;Name=Rv0417-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0417-1;rank=1 Chromosome ena CDS 502366 503124 . + 0 ID=CDS:Rv0417;Parent=transcript:Rv0417;protein_id=Rv0417 ### -Chromosome ena gene 503496 504998 . + . ID=gene:Rv0418;Name=lpqL;biotype=protein_coding;description=Probable lipoprotein aminopeptidase LpqL;gene_id=Rv0418;logic_name=ena +Chromosome ena gene 503496 504998 . + . ID=gene:Rv0418;Name=lpqL;biotype=protein_coding;description=Probable lipoprotein aminopeptidase LpqL;gene_id=Rv0418;logic_name=ena Chromosome ena mRNA 503496 504998 . + . ID=transcript:Rv0418;Parent=gene:Rv0418;Name=lpqL-1;biotype=protein_coding;transcript_id=Rv0418 Chromosome ena exon 503496 504998 . + . Parent=transcript:Rv0418;Name=Rv0418-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0418-1;rank=1 Chromosome ena CDS 503496 504998 . + 0 ID=CDS:Rv0418;Parent=transcript:Rv0418;protein_id=Rv0418 ### -Chromosome ena gene 505086 506582 . + . ID=gene:Rv0419;Name=lpqM;biotype=protein_coding;description=Possible lipoprotein peptidase LpqM;gene_id=Rv0419;logic_name=ena +Chromosome ena gene 505086 506582 . + . ID=gene:Rv0419;Name=lpqM;biotype=protein_coding;description=Possible lipoprotein peptidase LpqM;gene_id=Rv0419;logic_name=ena Chromosome ena mRNA 505086 506582 . + . ID=transcript:Rv0419;Parent=gene:Rv0419;Name=lpqM-1;biotype=protein_coding;transcript_id=Rv0419 Chromosome ena exon 505086 506582 . + . Parent=transcript:Rv0419;Name=Rv0419-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0419-1;rank=1 Chromosome ena CDS 505086 506582 . + 0 ID=CDS:Rv0419;Parent=transcript:Rv0419;protein_id=Rv0419 ### -Chromosome ena gene 506561 506971 . - . ID=gene:Rv0420c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0420c;logic_name=ena +Chromosome ena gene 506561 506971 . - . ID=gene:Rv0420c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0420c;logic_name=ena Chromosome ena mRNA 506561 506971 . - . ID=transcript:Rv0420c;Parent=gene:Rv0420c;biotype=protein_coding;transcript_id=Rv0420c Chromosome ena exon 506561 506971 . - . Parent=transcript:Rv0420c;Name=Rv0420c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0420c-1;rank=1 Chromosome ena CDS 506561 506971 . - 0 ID=CDS:Rv0420c;Parent=transcript:Rv0420c;protein_id=Rv0420c ### -Chromosome ena gene 507132 507761 . - . ID=gene:Rv0421c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0421c;logic_name=ena +Chromosome ena gene 507132 507761 . - . ID=gene:Rv0421c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0421c;logic_name=ena Chromosome ena mRNA 507132 507761 . - . ID=transcript:Rv0421c;Parent=gene:Rv0421c;biotype=protein_coding;transcript_id=Rv0421c Chromosome ena exon 507132 507761 . - . Parent=transcript:Rv0421c;Name=Rv0421c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0421c-1;rank=1 Chromosome ena CDS 507132 507761 . - 0 ID=CDS:Rv0421c;Parent=transcript:Rv0421c;protein_id=Rv0421c ### -Chromosome ena gene 507758 508555 . - . ID=gene:Rv0422c;Name=thiD;biotype=protein_coding;description=Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase);gene_id=Rv0422c;logic_name=ena +Chromosome ena gene 507758 508555 . - . ID=gene:Rv0422c;Name=thiD;biotype=protein_coding;description=Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase);gene_id=Rv0422c;logic_name=ena Chromosome ena mRNA 507758 508555 . - . ID=transcript:Rv0422c;Parent=gene:Rv0422c;Name=thiD-1;biotype=protein_coding;transcript_id=Rv0422c Chromosome ena exon 507758 508555 . - . Parent=transcript:Rv0422c;Name=Rv0422c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0422c-1;rank=1 Chromosome ena CDS 507758 508555 . - 0 ID=CDS:Rv0422c;Parent=transcript:Rv0422c;protein_id=Rv0422c ### -Chromosome ena gene 508582 510225 . - . ID=gene:Rv0423c;Name=thiC;biotype=protein_coding;description=Probable thiamine biosynthesis protein ThiC;gene_id=Rv0423c;logic_name=ena +Chromosome ena gene 508582 510225 . - . ID=gene:Rv0423c;Name=thiC;biotype=protein_coding;description=Probable thiamine biosynthesis protein ThiC;gene_id=Rv0423c;logic_name=ena Chromosome ena mRNA 508582 510225 . - . ID=transcript:Rv0423c;Parent=gene:Rv0423c;Name=thiC-1;biotype=protein_coding;transcript_id=Rv0423c Chromosome ena exon 508582 510225 . - . Parent=transcript:Rv0423c;Name=Rv0423c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0423c-1;rank=1 Chromosome ena CDS 508582 510225 . - 0 ID=CDS:Rv0423c;Parent=transcript:Rv0423c;protein_id=Rv0423c ### -Chromosome ena gene 510377 510652 . - . ID=gene:Rv0424c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0424c;logic_name=ena +Chromosome ena gene 510377 510652 . - . ID=gene:Rv0424c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0424c;logic_name=ena Chromosome ena mRNA 510377 510652 . - . ID=transcript:Rv0424c;Parent=gene:Rv0424c;biotype=protein_coding;transcript_id=Rv0424c Chromosome ena exon 510377 510652 . - . Parent=transcript:Rv0424c;Name=Rv0424c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0424c-1;rank=1 Chromosome ena CDS 510377 510652 . - 0 ID=CDS:Rv0424c;Parent=transcript:Rv0424c;protein_id=Rv0424c ### -Chromosome ena gene 510702 515321 . - . ID=gene:Rv0425c;Name=ctpH;biotype=protein_coding;description=Possible metal cation transporting P-type ATPase CtpH;gene_id=Rv0425c;logic_name=ena +Chromosome ena gene 510702 515321 . - . ID=gene:Rv0425c;Name=ctpH;biotype=protein_coding;description=Possible metal cation transporting P-type ATPase CtpH;gene_id=Rv0425c;logic_name=ena Chromosome ena mRNA 510702 515321 . - . ID=transcript:Rv0425c;Parent=gene:Rv0425c;Name=ctpH-1;biotype=protein_coding;transcript_id=Rv0425c Chromosome ena exon 510702 515321 . - . Parent=transcript:Rv0425c;Name=Rv0425c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0425c-1;rank=1 Chromosome ena CDS 510702 515321 . - 0 ID=CDS:Rv0425c;Parent=transcript:Rv0425c;protein_id=Rv0425c ### -Chromosome ena gene 515373 515816 . - . ID=gene:Rv0426c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0426c;logic_name=ena +Chromosome ena gene 515373 515816 . - . ID=gene:Rv0426c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0426c;logic_name=ena Chromosome ena mRNA 515373 515816 . - . ID=transcript:Rv0426c;Parent=gene:Rv0426c;biotype=protein_coding;transcript_id=Rv0426c Chromosome ena exon 515373 515816 . - . Parent=transcript:Rv0426c;Name=Rv0426c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0426c-1;rank=1 Chromosome ena CDS 515373 515816 . - 0 ID=CDS:Rv0426c;Parent=transcript:Rv0426c;protein_id=Rv0426c ### -Chromosome ena gene 516017 516892 . - . ID=gene:Rv0427c;Name=xthA;biotype=protein_coding;description=Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI);gene_id=Rv0427c;logic_name=ena +Chromosome ena gene 516017 516892 . - . ID=gene:Rv0427c;Name=xthA;biotype=protein_coding;description=Probable exodeoxyribonuclease III protein XthA (exonuclease III) (EXO III) (AP endonuclease VI);gene_id=Rv0427c;logic_name=ena Chromosome ena mRNA 516017 516892 . - . ID=transcript:Rv0427c;Parent=gene:Rv0427c;Name=xthA-1;biotype=protein_coding;transcript_id=Rv0427c Chromosome ena exon 516017 516892 . - . Parent=transcript:Rv0427c;Name=Rv0427c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0427c-1;rank=1 Chromosome ena CDS 516017 516892 . - 0 ID=CDS:Rv0427c;Parent=transcript:Rv0427c;protein_id=Rv0427c ### -Chromosome ena gene 516895 517803 . - . ID=gene:Rv0428c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0428c;logic_name=ena +Chromosome ena gene 516895 517803 . - . ID=gene:Rv0428c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0428c;logic_name=ena Chromosome ena mRNA 516895 517803 . - . ID=transcript:Rv0428c;Parent=gene:Rv0428c;biotype=protein_coding;transcript_id=Rv0428c Chromosome ena exon 516895 517803 . - . Parent=transcript:Rv0428c;Name=Rv0428c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0428c-1;rank=1 Chromosome ena CDS 516895 517803 . - 0 ID=CDS:Rv0428c;Parent=transcript:Rv0428c;protein_id=Rv0428c ### -Chromosome ena gene 517803 518396 . - . ID=gene:Rv0429c;Name=def;biotype=protein_coding;description=Probable polypeptide deformylase Def (PDF) (formylmethionine deformylase);gene_id=Rv0429c;logic_name=ena +Chromosome ena gene 517803 518396 . - . ID=gene:Rv0429c;Name=def;biotype=protein_coding;description=Probable polypeptide deformylase Def (PDF) (formylmethionine deformylase);gene_id=Rv0429c;logic_name=ena Chromosome ena mRNA 517803 518396 . - . ID=transcript:Rv0429c;Parent=gene:Rv0429c;Name=def-1;biotype=protein_coding;transcript_id=Rv0429c Chromosome ena exon 517803 518396 . - . Parent=transcript:Rv0429c;Name=Rv0429c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0429c-1;rank=1 Chromosome ena CDS 517803 518396 . - 0 ID=CDS:Rv0429c;Parent=transcript:Rv0429c;protein_id=Rv0429c ### -Chromosome ena gene 518733 519041 . + . ID=gene:Rv0430;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0430;logic_name=ena +Chromosome ena gene 518733 519041 . + . ID=gene:Rv0430;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0430;logic_name=ena Chromosome ena mRNA 518733 519041 . + . ID=transcript:Rv0430;Parent=gene:Rv0430;biotype=protein_coding;transcript_id=Rv0430 Chromosome ena exon 518733 519041 . + . Parent=transcript:Rv0430;Name=Rv0430-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0430-1;rank=1 Chromosome ena CDS 518733 519041 . + 0 ID=CDS:Rv0430;Parent=transcript:Rv0430;protein_id=Rv0430 ### -Chromosome ena gene 519073 519567 . + . ID=gene:Rv0431;biotype=protein_coding;description=Putative tuberculin related peptide;gene_id=Rv0431;logic_name=ena +Chromosome ena gene 519073 519567 . + . ID=gene:Rv0431;biotype=protein_coding;description=Putative tuberculin related peptide;gene_id=Rv0431;logic_name=ena Chromosome ena mRNA 519073 519567 . + . ID=transcript:Rv0431;Parent=gene:Rv0431;biotype=protein_coding;transcript_id=Rv0431 Chromosome ena exon 519073 519567 . + . Parent=transcript:Rv0431;Name=Rv0431-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0431-1;rank=1 Chromosome ena CDS 519073 519567 . + 0 ID=CDS:Rv0431;Parent=transcript:Rv0431;protein_id=Rv0431 ### -Chromosome ena gene 519600 520322 . + . ID=gene:Rv0432;Name=sodC;biotype=protein_coding;description=Periplasmic superoxide dismutase [Cu-Zn] SodC;gene_id=Rv0432;logic_name=ena +Chromosome ena gene 519600 520322 . + . ID=gene:Rv0432;Name=sodC;biotype=protein_coding;description=Periplasmic superoxide dismutase [Cu-Zn] SodC;gene_id=Rv0432;logic_name=ena Chromosome ena mRNA 519600 520322 . + . ID=transcript:Rv0432;Parent=gene:Rv0432;Name=sodC-1;biotype=protein_coding;transcript_id=Rv0432 Chromosome ena exon 519600 520322 . + . Parent=transcript:Rv0432;Name=Rv0432-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0432-1;rank=1 Chromosome ena CDS 519600 520322 . + 0 ID=CDS:Rv0432;Parent=transcript:Rv0432;protein_id=Rv0432 ### -Chromosome ena gene 520324 521454 . + . ID=gene:Rv0433;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0433;logic_name=ena +Chromosome ena gene 520324 521454 . + . ID=gene:Rv0433;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0433;logic_name=ena Chromosome ena mRNA 520324 521454 . + . ID=transcript:Rv0433;Parent=gene:Rv0433;biotype=protein_coding;transcript_id=Rv0433 Chromosome ena exon 520324 521454 . + . Parent=transcript:Rv0433;Name=Rv0433-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0433-1;rank=1 Chromosome ena CDS 520324 521454 . + 0 ID=CDS:Rv0433;Parent=transcript:Rv0433;protein_id=Rv0433 ### -Chromosome ena gene 521514 522167 . + . ID=gene:Rv0434;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0434;logic_name=ena +Chromosome ena gene 521514 522167 . + . ID=gene:Rv0434;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0434;logic_name=ena Chromosome ena mRNA 521514 522167 . + . ID=transcript:Rv0434;Parent=gene:Rv0434;biotype=protein_coding;transcript_id=Rv0434 Chromosome ena exon 521514 522167 . + . Parent=transcript:Rv0434;Name=Rv0434-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0434-1;rank=1 Chromosome ena CDS 521514 522167 . + 0 ID=CDS:Rv0434;Parent=transcript:Rv0434;protein_id=Rv0434 ### -Chromosome ena gene 522347 524533 . - . ID=gene:Rv0435c;biotype=protein_coding;description=Putative conserved ATPase;gene_id=Rv0435c;logic_name=ena +Chromosome ena gene 522347 524533 . - . ID=gene:Rv0435c;biotype=protein_coding;description=Putative conserved ATPase;gene_id=Rv0435c;logic_name=ena Chromosome ena mRNA 522347 524533 . - . ID=transcript:Rv0435c;Parent=gene:Rv0435c;biotype=protein_coding;transcript_id=Rv0435c Chromosome ena exon 522347 524533 . - . Parent=transcript:Rv0435c;Name=Rv0435c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0435c-1;rank=1 Chromosome ena CDS 522347 524533 . - 0 ID=CDS:Rv0435c;Parent=transcript:Rv0435c;protein_id=Rv0435c ### -Chromosome ena gene 524530 525390 . - . ID=gene:Rv0436c;Name=pssA;biotype=protein_coding;description=Probable CDP-diacylglycerol--serine O-phosphatidyltransferase PssA (PS synthase) (phosphatidylserine synthase);gene_id=Rv0436c;logic_name=ena +Chromosome ena gene 524530 525390 . - . ID=gene:Rv0436c;Name=pssA;biotype=protein_coding;description=Probable CDP-diacylglycerol--serine O-phosphatidyltransferase PssA (PS synthase) (phosphatidylserine synthase);gene_id=Rv0436c;logic_name=ena Chromosome ena mRNA 524530 525390 . - . ID=transcript:Rv0436c;Parent=gene:Rv0436c;Name=pssA-1;biotype=protein_coding;transcript_id=Rv0436c Chromosome ena exon 524530 525390 . - . Parent=transcript:Rv0436c;Name=Rv0436c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0436c-1;rank=1 Chromosome ena CDS 524530 525390 . - 0 ID=CDS:Rv0436c;Parent=transcript:Rv0436c;protein_id=Rv0436c ### -Chromosome ena gene 525387 526082 . - . ID=gene:Rv0437c;Name=psd;biotype=protein_coding;description=Possible phosphatidylserine decarboxylase Psd (PS decarboxylase);gene_id=Rv0437c;logic_name=ena +Chromosome ena gene 525387 526082 . - . ID=gene:Rv0437c;Name=psd;biotype=protein_coding;description=Possible phosphatidylserine decarboxylase Psd (PS decarboxylase);gene_id=Rv0437c;logic_name=ena Chromosome ena mRNA 525387 526082 . - . ID=transcript:Rv0437c;Parent=gene:Rv0437c;Name=psd-1;biotype=protein_coding;transcript_id=Rv0437c Chromosome ena exon 525387 526082 . - . Parent=transcript:Rv0437c;Name=Rv0437c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0437c-1;rank=1 Chromosome ena CDS 525387 526082 . - 0 ID=CDS:Rv0437c;Parent=transcript:Rv0437c;protein_id=Rv0437c ### -Chromosome ena gene 526143 527360 . - . ID=gene:Rv0438c;Name=moeA2;biotype=protein_coding;description=Probable molybdopterin biosynthesis protein MoeA2;gene_id=Rv0438c;logic_name=ena +Chromosome ena gene 526143 527360 . - . ID=gene:Rv0438c;Name=moeA2;biotype=protein_coding;description=Probable molybdopterin biosynthesis protein MoeA2;gene_id=Rv0438c;logic_name=ena Chromosome ena mRNA 526143 527360 . - . ID=transcript:Rv0438c;Parent=gene:Rv0438c;Name=moeA2-1;biotype=protein_coding;transcript_id=Rv0438c Chromosome ena exon 526143 527360 . - . Parent=transcript:Rv0438c;Name=Rv0438c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0438c-1;rank=1 Chromosome ena CDS 526143 527360 . - 0 ID=CDS:Rv0438c;Parent=transcript:Rv0438c;protein_id=Rv0438c ### -Chromosome ena gene 527379 528314 . - . ID=gene:Rv0439c;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0439c;logic_name=ena +Chromosome ena gene 527379 528314 . - . ID=gene:Rv0439c;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0439c;logic_name=ena Chromosome ena mRNA 527379 528314 . - . ID=transcript:Rv0439c;Parent=gene:Rv0439c;biotype=protein_coding;transcript_id=Rv0439c Chromosome ena exon 527379 528314 . - . Parent=transcript:Rv0439c;Name=Rv0439c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0439c-1;rank=1 Chromosome ena CDS 527379 528314 . - 0 ID=CDS:Rv0439c;Parent=transcript:Rv0439c;protein_id=Rv0439c ### -Chromosome ena gene 528608 530230 . + . ID=gene:Rv0440;Name=groEL2;biotype=protein_coding;description=60 kDa chaperonin 2 GroEL2 (protein CPN60-2) (GroEL protein 2) (65 kDa antigen) (heat shock protein 65) (cell wall protein A) (antigen A);gene_id=Rv0440;logic_name=ena +Chromosome ena gene 528608 530230 . + . ID=gene:Rv0440;Name=groEL2;biotype=protein_coding;description=60 kDa chaperonin 2 GroEL2 (protein CPN60-2) (GroEL protein 2) (65 kDa antigen) (heat shock protein 65) (cell wall protein A) (antigen A);gene_id=Rv0440;logic_name=ena Chromosome ena mRNA 528608 530230 . + . ID=transcript:Rv0440;Parent=gene:Rv0440;Name=groEL2-1;biotype=protein_coding;transcript_id=Rv0440 Chromosome ena exon 528608 530230 . + . Parent=transcript:Rv0440;Name=Rv0440-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0440-1;rank=1 Chromosome ena CDS 528608 530230 . + 0 ID=CDS:Rv0440;Parent=transcript:Rv0440;protein_id=Rv0440 ### -Chromosome ena gene 530296 530724 . - . ID=gene:Rv0441c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0441c;logic_name=ena +Chromosome ena gene 530296 530724 . - . ID=gene:Rv0441c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0441c;logic_name=ena Chromosome ena mRNA 530296 530724 . - . ID=transcript:Rv0441c;Parent=gene:Rv0441c;biotype=protein_coding;transcript_id=Rv0441c Chromosome ena exon 530296 530724 . - . Parent=transcript:Rv0441c;Name=Rv0441c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0441c-1;rank=1 Chromosome ena CDS 530296 530724 . - 0 ID=CDS:Rv0441c;Parent=transcript:Rv0441c;protein_id=Rv0441c ### -Chromosome ena gene 530751 532214 . - . ID=gene:Rv0442c;Name=PPE10;biotype=protein_coding;description=PPE family protein PPE10;gene_id=Rv0442c;logic_name=ena +Chromosome ena gene 530751 532214 . - . ID=gene:Rv0442c;Name=PPE10;biotype=protein_coding;description=PPE family protein PPE10;gene_id=Rv0442c;logic_name=ena Chromosome ena mRNA 530751 532214 . - . ID=transcript:Rv0442c;Parent=gene:Rv0442c;Name=PPE10-1;biotype=protein_coding;transcript_id=Rv0442c Chromosome ena exon 530751 532214 . - . Parent=transcript:Rv0442c;Name=Rv0442c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0442c-1;rank=1 Chromosome ena CDS 530751 532214 . - 0 ID=CDS:Rv0442c;Parent=transcript:Rv0442c;protein_id=Rv0442c ### -Chromosome ena gene 532396 532911 . + . ID=gene:Rv0443;biotype=protein_coding;description=Conserved protein;gene_id=Rv0443;logic_name=ena +Chromosome ena gene 532396 532911 . + . ID=gene:Rv0443;biotype=protein_coding;description=Conserved protein;gene_id=Rv0443;logic_name=ena Chromosome ena mRNA 532396 532911 . + . ID=transcript:Rv0443;Parent=gene:Rv0443;biotype=protein_coding;transcript_id=Rv0443 Chromosome ena exon 532396 532911 . + . Parent=transcript:Rv0443;Name=Rv0443-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0443-1;rank=1 Chromosome ena CDS 532396 532911 . + 0 ID=CDS:Rv0443;Parent=transcript:Rv0443;protein_id=Rv0443 ### -Chromosome ena gene 533091 533789 . - . ID=gene:Rv0444c;Name=rskA;biotype=protein_coding;description=Anti-sigma factor RskA (regulator of sigma K);gene_id=Rv0444c;logic_name=ena +Chromosome ena gene 533091 533789 . - . ID=gene:Rv0444c;Name=rskA;biotype=protein_coding;description=Anti-sigma factor RskA (regulator of sigma K);gene_id=Rv0444c;logic_name=ena Chromosome ena mRNA 533091 533789 . - . ID=transcript:Rv0444c;Parent=gene:Rv0444c;Name=rskA-1;biotype=protein_coding;transcript_id=Rv0444c Chromosome ena exon 533091 533789 . - . Parent=transcript:Rv0444c;Name=Rv0444c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0444c-1;rank=1 Chromosome ena CDS 533091 533789 . - 0 ID=CDS:Rv0444c;Parent=transcript:Rv0444c;protein_id=Rv0444c ### -Chromosome ena gene 533833 534396 . - . ID=gene:Rv0445c;Name=sigK;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigK;gene_id=Rv0445c;logic_name=ena +Chromosome ena gene 533833 534396 . - . ID=gene:Rv0445c;Name=sigK;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigK;gene_id=Rv0445c;logic_name=ena Chromosome ena mRNA 533833 534396 . - . ID=transcript:Rv0445c;Parent=gene:Rv0445c;Name=sigK-1;biotype=protein_coding;transcript_id=Rv0445c Chromosome ena exon 533833 534396 . - . Parent=transcript:Rv0445c;Name=Rv0445c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0445c-1;rank=1 Chromosome ena CDS 533833 534396 . - 0 ID=CDS:Rv0445c;Parent=transcript:Rv0445c;protein_id=Rv0445c ### -Chromosome ena gene 534445 535215 . - . ID=gene:Rv0446c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0446c;logic_name=ena +Chromosome ena gene 534445 535215 . - . ID=gene:Rv0446c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0446c;logic_name=ena Chromosome ena mRNA 534445 535215 . - . ID=transcript:Rv0446c;Parent=gene:Rv0446c;biotype=protein_coding;transcript_id=Rv0446c Chromosome ena exon 534445 535215 . - . Parent=transcript:Rv0446c;Name=Rv0446c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0446c-1;rank=1 Chromosome ena CDS 534445 535215 . - 0 ID=CDS:Rv0446c;Parent=transcript:Rv0446c;protein_id=Rv0446c ### -Chromosome ena gene 535224 536507 . - . ID=gene:Rv0447c;Name=ufaA1;biotype=protein_coding;description=Probable cyclopropane-fatty-acyl-phospholipid synthase UfaA1 (cyclopropane fatty acid synthase) (CFA synthase);gene_id=Rv0447c;logic_name=ena +Chromosome ena gene 535224 536507 . - . ID=gene:Rv0447c;Name=ufaA1;biotype=protein_coding;description=Probable cyclopropane-fatty-acyl-phospholipid synthase UfaA1 (cyclopropane fatty acid synthase) (CFA synthase);gene_id=Rv0447c;logic_name=ena Chromosome ena mRNA 535224 536507 . - . ID=transcript:Rv0447c;Parent=gene:Rv0447c;Name=ufaA1-1;biotype=protein_coding;transcript_id=Rv0447c Chromosome ena exon 535224 536507 . - . Parent=transcript:Rv0447c;Name=Rv0447c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0447c-1;rank=1 Chromosome ena CDS 535224 536507 . - 0 ID=CDS:Rv0447c;Parent=transcript:Rv0447c;protein_id=Rv0447c ### -Chromosome ena gene 536504 537169 . - . ID=gene:Rv0448c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0448c;logic_name=ena +Chromosome ena gene 536504 537169 . - . ID=gene:Rv0448c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0448c;logic_name=ena Chromosome ena mRNA 536504 537169 . - . ID=transcript:Rv0448c;Parent=gene:Rv0448c;biotype=protein_coding;transcript_id=Rv0448c Chromosome ena exon 536504 537169 . - . Parent=transcript:Rv0448c;Name=Rv0448c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0448c-1;rank=1 Chromosome ena CDS 536504 537169 . - 0 ID=CDS:Rv0448c;Parent=transcript:Rv0448c;protein_id=Rv0448c ### -Chromosome ena gene 537229 538548 . - . ID=gene:Rv0449c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0449c;logic_name=ena +Chromosome ena gene 537229 538548 . - . ID=gene:Rv0449c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0449c;logic_name=ena Chromosome ena mRNA 537229 538548 . - . ID=transcript:Rv0449c;Parent=gene:Rv0449c;biotype=protein_coding;transcript_id=Rv0449c Chromosome ena exon 537229 538548 . - . Parent=transcript:Rv0449c;Name=Rv0449c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0449c-1;rank=1 Chromosome ena CDS 537229 538548 . - 0 ID=CDS:Rv0449c;Parent=transcript:Rv0449c;protein_id=Rv0449c ### -Chromosome ena gene 538588 541491 . - . ID=gene:Rv0450c;Name=mmpL4;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL4;gene_id=Rv0450c;logic_name=ena +Chromosome ena gene 538588 541491 . - . ID=gene:Rv0450c;Name=mmpL4;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL4;gene_id=Rv0450c;logic_name=ena Chromosome ena mRNA 538588 541491 . - . ID=transcript:Rv0450c;Parent=gene:Rv0450c;Name=mmpL4-1;biotype=protein_coding;transcript_id=Rv0450c Chromosome ena exon 538588 541491 . - . Parent=transcript:Rv0450c;Name=Rv0450c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0450c-1;rank=1 Chromosome ena CDS 538588 541491 . - 0 ID=CDS:Rv0450c;Parent=transcript:Rv0450c;protein_id=Rv0450c ### -Chromosome ena gene 541488 541910 . - . ID=gene:Rv0451c;Name=mmpS4;biotype=protein_coding;description=Probable conserved membrane protein MmpS4;gene_id=Rv0451c;logic_name=ena +Chromosome ena gene 541488 541910 . - . ID=gene:Rv0451c;Name=mmpS4;biotype=protein_coding;description=Probable conserved membrane protein MmpS4;gene_id=Rv0451c;logic_name=ena Chromosome ena mRNA 541488 541910 . - . ID=transcript:Rv0451c;Parent=gene:Rv0451c;Name=mmpS4-1;biotype=protein_coding;transcript_id=Rv0451c Chromosome ena exon 541488 541910 . - . Parent=transcript:Rv0451c;Name=Rv0451c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0451c-1;rank=1 Chromosome ena CDS 541488 541910 . - 0 ID=CDS:Rv0451c;Parent=transcript:Rv0451c;protein_id=Rv0451c ### -Chromosome ena gene 542142 542852 . + . ID=gene:Rv0452;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0452;logic_name=ena +Chromosome ena gene 542142 542852 . + . ID=gene:Rv0452;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0452;logic_name=ena Chromosome ena mRNA 542142 542852 . + . ID=transcript:Rv0452;Parent=gene:Rv0452;biotype=protein_coding;transcript_id=Rv0452 Chromosome ena exon 542142 542852 . + . Parent=transcript:Rv0452;Name=Rv0452-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0452-1;rank=1 Chromosome ena CDS 542142 542852 . + 0 ID=CDS:Rv0452;Parent=transcript:Rv0452;protein_id=Rv0452 ### -Chromosome ena gene 543174 544730 . + . ID=gene:Rv0453;Name=PPE11;biotype=protein_coding;description=PPE family protein PPE11;gene_id=Rv0453;logic_name=ena +Chromosome ena gene 543174 544730 . + . ID=gene:Rv0453;Name=PPE11;biotype=protein_coding;description=PPE family protein PPE11;gene_id=Rv0453;logic_name=ena Chromosome ena mRNA 543174 544730 . + . ID=transcript:Rv0453;Parent=gene:Rv0453;Name=PPE11-1;biotype=protein_coding;transcript_id=Rv0453 Chromosome ena exon 543174 544730 . + . Parent=transcript:Rv0453;Name=Rv0453-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0453-1;rank=1 Chromosome ena CDS 543174 544730 . + 0 ID=CDS:Rv0453;Parent=transcript:Rv0453;protein_id=Rv0453 ### -Chromosome ena gene 544835 545185 . + . ID=gene:Rv0454;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0454;logic_name=ena +Chromosome ena gene 544835 545185 . + . ID=gene:Rv0454;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0454;logic_name=ena Chromosome ena mRNA 544835 545185 . + . ID=transcript:Rv0454;Parent=gene:Rv0454;biotype=protein_coding;transcript_id=Rv0454 Chromosome ena exon 544835 545185 . + . Parent=transcript:Rv0454;Name=Rv0454-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0454-1;rank=1 Chromosome ena CDS 544835 545185 . + 0 ID=CDS:Rv0454;Parent=transcript:Rv0454;protein_id=Rv0454 ### -Chromosome ena gene 545375 545821 . - . ID=gene:Rv0455c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0455c;logic_name=ena +Chromosome ena gene 545375 545821 . - . ID=gene:Rv0455c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0455c;logic_name=ena Chromosome ena mRNA 545375 545821 . - . ID=transcript:Rv0455c;Parent=gene:Rv0455c;biotype=protein_coding;transcript_id=Rv0455c Chromosome ena exon 545375 545821 . - . Parent=transcript:Rv0455c;Name=Rv0455c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0455c-1;rank=1 Chromosome ena CDS 545375 545821 . - 0 ID=CDS:Rv0455c;Parent=transcript:Rv0455c;protein_id=Rv0455c ### -Chromosome ena gene 545889 546803 . - . ID=gene:Rv0456c;Name=echA2;biotype=protein_coding;description=enoyl-CoA hydratase EchA2 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0456c;logic_name=ena +Chromosome ena gene 545889 546803 . - . ID=gene:Rv0456c;Name=echA2;biotype=protein_coding;description=enoyl-CoA hydratase EchA2 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0456c;logic_name=ena Chromosome ena mRNA 545889 546803 . - . ID=transcript:Rv0456c;Parent=gene:Rv0456c;Name=echA2-1;biotype=protein_coding;transcript_id=Rv0456c Chromosome ena exon 545889 546803 . - . Parent=transcript:Rv0456c;Name=Rv0456c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0456c-1;rank=1 Chromosome ena CDS 545889 546803 . - 0 ID=CDS:Rv0456c;Parent=transcript:Rv0456c;protein_id=Rv0456c ### -Chromosome ena gene 547076 547357 . - . ID=gene:Rv0456A;Name=mazF1;biotype=protein_coding;description=Possible toxin MazF1;gene_id=Rv0456A;logic_name=ena +Chromosome ena gene 547076 547357 . - . ID=gene:Rv0456A;Name=mazF1;biotype=protein_coding;description=Possible toxin MazF1;gene_id=Rv0456A;logic_name=ena Chromosome ena mRNA 547076 547357 . - . ID=transcript:Rv0456A;Parent=gene:Rv0456A;Name=mazF1-1;biotype=protein_coding;transcript_id=Rv0456A Chromosome ena exon 547076 547357 . - . Parent=transcript:Rv0456A;Name=Rv0456A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0456A-1;rank=1 Chromosome ena CDS 547076 547357 . - 0 ID=CDS:Rv0456A;Parent=transcript:Rv0456A;protein_id=Rv0456A ### -Chromosome ena gene 547344 547517 . - . ID=gene:Rv0456B;Name=mazE1;biotype=protein_coding;description=Possible antitoxin MazE1;gene_id=Rv0456B;logic_name=ena +Chromosome ena gene 547344 547517 . - . ID=gene:Rv0456B;Name=mazE1;biotype=protein_coding;description=Possible antitoxin MazE1;gene_id=Rv0456B;logic_name=ena Chromosome ena mRNA 547344 547517 . - . ID=transcript:Rv0456B;Parent=gene:Rv0456B;Name=mazE1-1;biotype=protein_coding;transcript_id=Rv0456B Chromosome ena exon 547344 547517 . - . Parent=transcript:Rv0456B;Name=Rv0456B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0456B-1;rank=1 Chromosome ena CDS 547344 547517 . - 0 ID=CDS:Rv0456B;Parent=transcript:Rv0456B;protein_id=Rv0456B ### -Chromosome ena gene 547586 549607 . - . ID=gene:Rv0457c;biotype=protein_coding;description=Probable peptidase;gene_id=Rv0457c;logic_name=ena +Chromosome ena gene 547586 549607 . - . ID=gene:Rv0457c;biotype=protein_coding;description=Probable peptidase;gene_id=Rv0457c;logic_name=ena Chromosome ena mRNA 547586 549607 . - . ID=transcript:Rv0457c;Parent=gene:Rv0457c;biotype=protein_coding;transcript_id=Rv0457c Chromosome ena exon 547586 549607 . - . Parent=transcript:Rv0457c;Name=Rv0457c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0457c-1;rank=1 Chromosome ena CDS 547586 549607 . - 0 ID=CDS:Rv0457c;Parent=transcript:Rv0457c;protein_id=Rv0457c ### -Chromosome ena gene 549675 551198 . + . ID=gene:Rv0458;biotype=protein_coding;description=Probable aldehyde dehydrogenase;gene_id=Rv0458;logic_name=ena +Chromosome ena gene 549675 551198 . + . ID=gene:Rv0458;biotype=protein_coding;description=Probable aldehyde dehydrogenase;gene_id=Rv0458;logic_name=ena Chromosome ena mRNA 549675 551198 . + . ID=transcript:Rv0458;Parent=gene:Rv0458;biotype=protein_coding;transcript_id=Rv0458 Chromosome ena exon 549675 551198 . + . Parent=transcript:Rv0458;Name=Rv0458-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0458-1;rank=1 Chromosome ena CDS 549675 551198 . + 0 ID=CDS:Rv0458;Parent=transcript:Rv0458;protein_id=Rv0458 ### -Chromosome ena gene 551198 551689 . + . ID=gene:Rv0459;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0459;logic_name=ena +Chromosome ena gene 551198 551689 . + . ID=gene:Rv0459;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0459;logic_name=ena Chromosome ena mRNA 551198 551689 . + . ID=transcript:Rv0459;Parent=gene:Rv0459;biotype=protein_coding;transcript_id=Rv0459 Chromosome ena exon 551198 551689 . + . Parent=transcript:Rv0459;Name=Rv0459-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0459-1;rank=1 Chromosome ena CDS 551198 551689 . + 0 ID=CDS:Rv0459;Parent=transcript:Rv0459;protein_id=Rv0459 ### -Chromosome ena gene 551749 551988 . + . ID=gene:Rv0460;biotype=protein_coding;description=Conserved hydrophobic protein;gene_id=Rv0460;logic_name=ena +Chromosome ena gene 551749 551988 . + . ID=gene:Rv0460;biotype=protein_coding;description=Conserved hydrophobic protein;gene_id=Rv0460;logic_name=ena Chromosome ena mRNA 551749 551988 . + . ID=transcript:Rv0460;Parent=gene:Rv0460;biotype=protein_coding;transcript_id=Rv0460 Chromosome ena exon 551749 551988 . + . Parent=transcript:Rv0460;Name=Rv0460-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0460-1;rank=1 Chromosome ena CDS 551749 551988 . + 0 ID=CDS:Rv0460;Parent=transcript:Rv0460;protein_id=Rv0460 ### -Chromosome ena gene 552026 552550 . + . ID=gene:Rv0461;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv0461;logic_name=ena +Chromosome ena gene 552026 552550 . + . ID=gene:Rv0461;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv0461;logic_name=ena Chromosome ena mRNA 552026 552550 . + . ID=transcript:Rv0461;Parent=gene:Rv0461;biotype=protein_coding;transcript_id=Rv0461 Chromosome ena exon 552026 552550 . + . Parent=transcript:Rv0461;Name=Rv0461-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0461-1;rank=1 Chromosome ena CDS 552026 552550 . + 0 ID=CDS:Rv0461;Parent=transcript:Rv0461;protein_id=Rv0461 ### -Chromosome ena gene 552614 554008 . + . ID=gene:Rv0462;Name=lpdC;biotype=protein_coding;description=Dihydrolipoamide dehydrogenase LpdC (lipoamide reductase (NADH)) (lipoyl dehydrogenase) (dihydrolipoyl dehydrogenase) (diaphorase);gene_id=Rv0462;logic_name=ena +Chromosome ena gene 552614 554008 . + . ID=gene:Rv0462;Name=lpdC;biotype=protein_coding;description=Dihydrolipoamide dehydrogenase LpdC (lipoamide reductase (NADH)) (lipoyl dehydrogenase) (dihydrolipoyl dehydrogenase) (diaphorase);gene_id=Rv0462;logic_name=ena Chromosome ena mRNA 552614 554008 . + . ID=transcript:Rv0462;Parent=gene:Rv0462;Name=lpdC-1;biotype=protein_coding;transcript_id=Rv0462 Chromosome ena exon 552614 554008 . + . Parent=transcript:Rv0462;Name=Rv0462-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0462-1;rank=1 Chromosome ena CDS 552614 554008 . + 0 ID=CDS:Rv0462;Parent=transcript:Rv0462;protein_id=Rv0462 ### -Chromosome ena gene 554016 554309 . + . ID=gene:Rv0463;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0463;logic_name=ena +Chromosome ena gene 554016 554309 . + . ID=gene:Rv0463;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0463;logic_name=ena Chromosome ena mRNA 554016 554309 . + . ID=transcript:Rv0463;Parent=gene:Rv0463;biotype=protein_coding;transcript_id=Rv0463 Chromosome ena exon 554016 554309 . + . Parent=transcript:Rv0463;Name=Rv0463-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0463-1;rank=1 Chromosome ena CDS 554016 554309 . + 0 ID=CDS:Rv0463;Parent=transcript:Rv0463;protein_id=Rv0463 ### -Chromosome ena gene 554313 554885 . - . ID=gene:Rv0464c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0464c;logic_name=ena +Chromosome ena gene 554313 554885 . - . ID=gene:Rv0464c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0464c;logic_name=ena Chromosome ena mRNA 554313 554885 . - . ID=transcript:Rv0464c;Parent=gene:Rv0464c;biotype=protein_coding;transcript_id=Rv0464c Chromosome ena exon 554313 554885 . - . Parent=transcript:Rv0464c;Name=Rv0464c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0464c-1;rank=1 Chromosome ena CDS 554313 554885 . - 0 ID=CDS:Rv0464c;Parent=transcript:Rv0464c;protein_id=Rv0464c ### -Chromosome ena gene 554882 556306 . - . ID=gene:Rv0465c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0465c;logic_name=ena +Chromosome ena gene 554882 556306 . - . ID=gene:Rv0465c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0465c;logic_name=ena Chromosome ena mRNA 554882 556306 . - . ID=transcript:Rv0465c;Parent=gene:Rv0465c;biotype=protein_coding;transcript_id=Rv0465c Chromosome ena exon 554882 556306 . - . Parent=transcript:Rv0465c;Name=Rv0465c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0465c-1;rank=1 Chromosome ena CDS 554882 556306 . - 0 ID=CDS:Rv0465c;Parent=transcript:Rv0465c;protein_id=Rv0465c ### -Chromosome ena gene 556458 557252 . + . ID=gene:Rv0466;biotype=protein_coding;description=Conserved protein;gene_id=Rv0466;logic_name=ena +Chromosome ena gene 556458 557252 . + . ID=gene:Rv0466;biotype=protein_coding;description=Conserved protein;gene_id=Rv0466;logic_name=ena Chromosome ena mRNA 556458 557252 . + . ID=transcript:Rv0466;Parent=gene:Rv0466;biotype=protein_coding;transcript_id=Rv0466 Chromosome ena exon 556458 557252 . + . Parent=transcript:Rv0466;Name=Rv0466-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0466-1;rank=1 Chromosome ena CDS 556458 557252 . + 0 ID=CDS:Rv0466;Parent=transcript:Rv0466;protein_id=Rv0466 ### -Chromosome ena gene 557527 558813 . + . ID=gene:Rv0467;Name=icl1;biotype=protein_coding;description=Isocitrate lyase Icl (isocitrase) (isocitratase);gene_id=Rv0467;logic_name=ena +Chromosome ena gene 557527 558813 . + . ID=gene:Rv0467;Name=icl1;biotype=protein_coding;description=Isocitrate lyase Icl (isocitrase) (isocitratase);gene_id=Rv0467;logic_name=ena Chromosome ena mRNA 557527 558813 . + . ID=transcript:Rv0467;Parent=gene:Rv0467;Name=icl1-1;biotype=protein_coding;transcript_id=Rv0467 Chromosome ena exon 557527 558813 . + . Parent=transcript:Rv0467;Name=Rv0467-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0467-1;rank=1 Chromosome ena CDS 557527 558813 . + 0 ID=CDS:Rv0467;Parent=transcript:Rv0467;protein_id=Rv0467 ### -Chromosome ena gene 558895 559755 . + . ID=gene:Rv0468;Name=fadB2;biotype=protein_coding;description=3-hydroxybutyryl-CoA dehydrogenase FadB2 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD);gene_id=Rv0468;logic_name=ena +Chromosome ena gene 558895 559755 . + . ID=gene:Rv0468;Name=fadB2;biotype=protein_coding;description=3-hydroxybutyryl-CoA dehydrogenase FadB2 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD);gene_id=Rv0468;logic_name=ena Chromosome ena mRNA 558895 559755 . + . ID=transcript:Rv0468;Parent=gene:Rv0468;Name=fadB2-1;biotype=protein_coding;transcript_id=Rv0468 Chromosome ena exon 558895 559755 . + . Parent=transcript:Rv0468;Name=Rv0468-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0468-1;rank=1 Chromosome ena CDS 558895 559755 . + 0 ID=CDS:Rv0468;Parent=transcript:Rv0468;protein_id=Rv0468 ### -Chromosome ena gene 559888 560748 . + . ID=gene:Rv0469;Name=umaA;biotype=protein_coding;description=Possible mycolic acid synthase UmaA;gene_id=Rv0469;logic_name=ena +Chromosome ena gene 559888 560748 . + . ID=gene:Rv0469;Name=umaA;biotype=protein_coding;description=Possible mycolic acid synthase UmaA;gene_id=Rv0469;logic_name=ena Chromosome ena mRNA 559888 560748 . + . ID=transcript:Rv0469;Parent=gene:Rv0469;Name=umaA-1;biotype=protein_coding;transcript_id=Rv0469 Chromosome ena exon 559888 560748 . + . Parent=transcript:Rv0469;Name=Rv0469-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0469-1;rank=1 Chromosome ena CDS 559888 560748 . + 0 ID=CDS:Rv0469;Parent=transcript:Rv0469;protein_id=Rv0469 ### -Chromosome ena gene 560848 561711 . - . ID=gene:Rv0470c;Name=pcaA;biotype=protein_coding;description=Mycolic acid synthase PcaA (cyclopropane synthase);gene_id=Rv0470c;logic_name=ena +Chromosome ena gene 560848 561711 . - . ID=gene:Rv0470c;Name=pcaA;biotype=protein_coding;description=Mycolic acid synthase PcaA (cyclopropane synthase);gene_id=Rv0470c;logic_name=ena Chromosome ena mRNA 560848 561711 . - . ID=transcript:Rv0470c;Parent=gene:Rv0470c;Name=pcaA-1;biotype=protein_coding;transcript_id=Rv0470c Chromosome ena exon 560848 561711 . - . Parent=transcript:Rv0470c;Name=Rv0470c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0470c-1;rank=1 Chromosome ena CDS 560848 561711 . - 0 ID=CDS:Rv0470c;Parent=transcript:Rv0470c;protein_id=Rv0470c ### -Chromosome ena gene 561854 562294 . - . ID=gene:Rv0470A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0470A;logic_name=ena +Chromosome ena gene 561854 562294 . - . ID=gene:Rv0470A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0470A;logic_name=ena Chromosome ena mRNA 561854 562294 . - . ID=transcript:Rv0470A;Parent=gene:Rv0470A;biotype=protein_coding;transcript_id=Rv0470A Chromosome ena exon 561854 562294 . - . Parent=transcript:Rv0470A;Name=Rv0470A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0470A-1;rank=1 Chromosome ena CDS 561854 562294 . - 0 ID=CDS:Rv0470A;Parent=transcript:Rv0470A;protein_id=Rv0470A ### -Chromosome ena gene 562225 562713 . - . ID=gene:Rv0471c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0471c;logic_name=ena +Chromosome ena gene 562225 562713 . - . ID=gene:Rv0471c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0471c;logic_name=ena Chromosome ena mRNA 562225 562713 . - . ID=transcript:Rv0471c;Parent=gene:Rv0471c;biotype=protein_coding;transcript_id=Rv0471c Chromosome ena exon 562225 562713 . - . Parent=transcript:Rv0471c;Name=Rv0471c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0471c-1;rank=1 Chromosome ena CDS 562225 562713 . - 0 ID=CDS:Rv0471c;Parent=transcript:Rv0471c;protein_id=Rv0471c ### -Chromosome ena gene 562723 563427 . - . ID=gene:Rv0472c;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0472c;logic_name=ena +Chromosome ena gene 562723 563427 . - . ID=gene:Rv0472c;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0472c;logic_name=ena Chromosome ena mRNA 562723 563427 . - . ID=transcript:Rv0472c;Parent=gene:Rv0472c;biotype=protein_coding;transcript_id=Rv0472c Chromosome ena exon 562723 563427 . - . Parent=transcript:Rv0472c;Name=Rv0472c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0472c-1;rank=1 Chromosome ena CDS 562723 563427 . - 0 ID=CDS:Rv0472c;Parent=transcript:Rv0472c;protein_id=Rv0472c ### -Chromosome ena gene 563564 564934 . + . ID=gene:Rv0473;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0473;logic_name=ena +Chromosome ena gene 563564 564934 . + . ID=gene:Rv0473;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0473;logic_name=ena Chromosome ena mRNA 563564 564934 . + . ID=transcript:Rv0473;Parent=gene:Rv0473;biotype=protein_coding;transcript_id=Rv0473 Chromosome ena exon 563564 564934 . + . Parent=transcript:Rv0473;Name=Rv0473-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0473-1;rank=1 Chromosome ena CDS 563564 564934 . + 0 ID=CDS:Rv0473;Parent=transcript:Rv0473;protein_id=Rv0473 ### -Chromosome ena gene 565021 565443 . + . ID=gene:Rv0474;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0474;logic_name=ena +Chromosome ena gene 565021 565443 . + . ID=gene:Rv0474;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0474;logic_name=ena Chromosome ena mRNA 565021 565443 . + . ID=transcript:Rv0474;Parent=gene:Rv0474;biotype=protein_coding;transcript_id=Rv0474 Chromosome ena exon 565021 565443 . + . Parent=transcript:Rv0474;Name=Rv0474-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0474-1;rank=1 Chromosome ena CDS 565021 565443 . + 0 ID=CDS:Rv0474;Parent=transcript:Rv0474;protein_id=Rv0474 ### -Chromosome ena gene 565797 566396 . + . ID=gene:Rv0475;Name=hbhA;biotype=protein_coding;description=Iron-regulated heparin binding hemagglutinin HbhA (adhesin);gene_id=Rv0475;logic_name=ena +Chromosome ena gene 565797 566396 . + . ID=gene:Rv0475;Name=hbhA;biotype=protein_coding;description=Iron-regulated heparin binding hemagglutinin HbhA (adhesin);gene_id=Rv0475;logic_name=ena Chromosome ena mRNA 565797 566396 . + . ID=transcript:Rv0475;Parent=gene:Rv0475;Name=hbhA-1;biotype=protein_coding;transcript_id=Rv0475 Chromosome ena exon 565797 566396 . + . Parent=transcript:Rv0475;Name=Rv0475-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0475-1;rank=1 Chromosome ena CDS 565797 566396 . + 0 ID=CDS:Rv0475;Parent=transcript:Rv0475;protein_id=Rv0475 ### -Chromosome ena gene 566508 566771 . + . ID=gene:Rv0476;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0476;logic_name=ena +Chromosome ena gene 566508 566771 . + . ID=gene:Rv0476;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0476;logic_name=ena Chromosome ena mRNA 566508 566771 . + . ID=transcript:Rv0476;Parent=gene:Rv0476;biotype=protein_coding;transcript_id=Rv0476 Chromosome ena exon 566508 566771 . + . Parent=transcript:Rv0476;Name=Rv0476-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0476-1;rank=1 Chromosome ena CDS 566508 566771 . + 0 ID=CDS:Rv0476;Parent=transcript:Rv0476;protein_id=Rv0476 ### -Chromosome ena gene 566776 567222 . + . ID=gene:Rv0477;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0477;logic_name=ena +Chromosome ena gene 566776 567222 . + . ID=gene:Rv0477;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0477;logic_name=ena Chromosome ena mRNA 566776 567222 . + . ID=transcript:Rv0477;Parent=gene:Rv0477;biotype=protein_coding;transcript_id=Rv0477 Chromosome ena exon 566776 567222 . + . Parent=transcript:Rv0477;Name=Rv0477-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0477-1;rank=1 Chromosome ena CDS 566776 567222 . + 0 ID=CDS:Rv0477;Parent=transcript:Rv0477;protein_id=Rv0477 ### -Chromosome ena gene 567222 567896 . + . ID=gene:Rv0478;Name=deoC;biotype=protein_coding;description=Probable deoxyribose-phosphate aldolase DeoC (phosphodeoxyriboaldolase) (deoxyriboaldolase);gene_id=Rv0478;logic_name=ena +Chromosome ena gene 567222 567896 . + . ID=gene:Rv0478;Name=deoC;biotype=protein_coding;description=Probable deoxyribose-phosphate aldolase DeoC (phosphodeoxyriboaldolase) (deoxyriboaldolase);gene_id=Rv0478;logic_name=ena Chromosome ena mRNA 567222 567896 . + . ID=transcript:Rv0478;Parent=gene:Rv0478;Name=deoC-1;biotype=protein_coding;transcript_id=Rv0478 Chromosome ena exon 567222 567896 . + . Parent=transcript:Rv0478;Name=Rv0478-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0478-1;rank=1 Chromosome ena CDS 567222 567896 . + 0 ID=CDS:Rv0478;Parent=transcript:Rv0478;protein_id=Rv0478 ### -Chromosome ena gene 567921 568967 . - . ID=gene:Rv0479c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0479c;logic_name=ena +Chromosome ena gene 567921 568967 . - . ID=gene:Rv0479c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv0479c;logic_name=ena Chromosome ena mRNA 567921 568967 . - . ID=transcript:Rv0479c;Parent=gene:Rv0479c;biotype=protein_coding;transcript_id=Rv0479c Chromosome ena exon 567921 568967 . - . Parent=transcript:Rv0479c;Name=Rv0479c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0479c-1;rank=1 Chromosome ena CDS 567921 568967 . - 0 ID=CDS:Rv0479c;Parent=transcript:Rv0479c;protein_id=Rv0479c ### -Chromosome ena gene 568964 569806 . - . ID=gene:Rv0480c;biotype=protein_coding;description=Possible amidohydrolase;gene_id=Rv0480c;logic_name=ena +Chromosome ena gene 568964 569806 . - . ID=gene:Rv0480c;biotype=protein_coding;description=Possible amidohydrolase;gene_id=Rv0480c;logic_name=ena Chromosome ena mRNA 568964 569806 . - . ID=transcript:Rv0480c;Parent=gene:Rv0480c;biotype=protein_coding;transcript_id=Rv0480c Chromosome ena exon 568964 569806 . - . Parent=transcript:Rv0480c;Name=Rv0480c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0480c-1;rank=1 Chromosome ena CDS 568964 569806 . - 0 ID=CDS:Rv0480c;Parent=transcript:Rv0480c;protein_id=Rv0480c ### -Chromosome ena gene 569988 570512 . - . ID=gene:Rv0481c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0481c;logic_name=ena +Chromosome ena gene 569988 570512 . - . ID=gene:Rv0481c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0481c;logic_name=ena Chromosome ena mRNA 569988 570512 . - . ID=transcript:Rv0481c;Parent=gene:Rv0481c;biotype=protein_coding;transcript_id=Rv0481c Chromosome ena exon 569988 570512 . - . Parent=transcript:Rv0481c;Name=Rv0481c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0481c-1;rank=1 Chromosome ena CDS 569988 570512 . - 0 ID=CDS:Rv0481c;Parent=transcript:Rv0481c;protein_id=Rv0481c ### -Chromosome ena gene 570539 571648 . + . ID=gene:Rv0482;Name=murB;biotype=protein_coding;description=Probable UDP-N-acetylenolpyruvoylglucosamine reductase MurB (UDP-N-acetylmuramate dehydrogenase);gene_id=Rv0482;logic_name=ena +Chromosome ena gene 570539 571648 . + . ID=gene:Rv0482;Name=murB;biotype=protein_coding;description=Probable UDP-N-acetylenolpyruvoylglucosamine reductase MurB (UDP-N-acetylmuramate dehydrogenase);gene_id=Rv0482;logic_name=ena Chromosome ena mRNA 570539 571648 . + . ID=transcript:Rv0482;Parent=gene:Rv0482;Name=murB-1;biotype=protein_coding;transcript_id=Rv0482 Chromosome ena exon 570539 571648 . + . Parent=transcript:Rv0482;Name=Rv0482-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0482-1;rank=1 Chromosome ena CDS 570539 571648 . + 0 ID=CDS:Rv0482;Parent=transcript:Rv0482;protein_id=Rv0482 ### -Chromosome ena gene 571710 573065 . + . ID=gene:Rv0483;Name=lprQ;biotype=protein_coding;description=Probable conserved lipoprotein LprQ;gene_id=Rv0483;logic_name=ena +Chromosome ena gene 571710 573065 . + . ID=gene:Rv0483;Name=lprQ;biotype=protein_coding;description=Probable conserved lipoprotein LprQ;gene_id=Rv0483;logic_name=ena Chromosome ena mRNA 571710 573065 . + . ID=transcript:Rv0483;Parent=gene:Rv0483;Name=lprQ-1;biotype=protein_coding;transcript_id=Rv0483 Chromosome ena exon 571710 573065 . + . Parent=transcript:Rv0483;Name=Rv0483-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0483-1;rank=1 Chromosome ena CDS 571710 573065 . + 0 ID=CDS:Rv0483;Parent=transcript:Rv0483;protein_id=Rv0483 ### -Chromosome ena gene 573046 573801 . - . ID=gene:Rv0484c;biotype=protein_coding;description=Probable short-chain type oxidoreductase;gene_id=Rv0484c;logic_name=ena +Chromosome ena gene 573046 573801 . - . ID=gene:Rv0484c;biotype=protein_coding;description=Probable short-chain type oxidoreductase;gene_id=Rv0484c;logic_name=ena Chromosome ena mRNA 573046 573801 . - . ID=transcript:Rv0484c;Parent=gene:Rv0484c;biotype=protein_coding;transcript_id=Rv0484c Chromosome ena exon 573046 573801 . - . Parent=transcript:Rv0484c;Name=Rv0484c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0484c-1;rank=1 Chromosome ena CDS 573046 573801 . - 0 ID=CDS:Rv0484c;Parent=transcript:Rv0484c;protein_id=Rv0484c ### -Chromosome ena gene 573984 575300 . + . ID=gene:Rv0485;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0485;logic_name=ena +Chromosome ena gene 573984 575300 . + . ID=gene:Rv0485;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0485;logic_name=ena Chromosome ena mRNA 573984 575300 . + . ID=transcript:Rv0485;Parent=gene:Rv0485;biotype=protein_coding;transcript_id=Rv0485 Chromosome ena exon 573984 575300 . + . Parent=transcript:Rv0485;Name=Rv0485-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0485-1;rank=1 Chromosome ena CDS 573984 575300 . + 0 ID=CDS:Rv0485;Parent=transcript:Rv0485;protein_id=Rv0485 @@ -2521,427 +2521,427 @@ Chromosome ena transcript 575033 575069 . + . ID=transcript:EBG00000313327;Paren Chromosome ena exon 575033 575069 . + . Parent=transcript:EBG00000313327;Name=EBG00000313327;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313327;rank=1 ### Chromosome ena_gene biological_region 575033 575069 . + . external_name=AL123456.3:gene:575033..575069;logic_name=ena_gene -Chromosome ena gene 575348 576790 . + . ID=gene:Rv0486;Name=mshA;biotype=protein_coding;description=Glycosyltransferase MshA;gene_id=Rv0486;logic_name=ena +Chromosome ena gene 575348 576790 . + . ID=gene:Rv0486;Name=mshA;biotype=protein_coding;description=Glycosyltransferase MshA;gene_id=Rv0486;logic_name=ena Chromosome ena mRNA 575348 576790 . + . ID=transcript:Rv0486;Parent=gene:Rv0486;Name=mshA-1;biotype=protein_coding;transcript_id=Rv0486 Chromosome ena exon 575348 576790 . + . Parent=transcript:Rv0486;Name=Rv0486-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0486-1;rank=1 Chromosome ena CDS 575348 576790 . + 0 ID=CDS:Rv0486;Parent=transcript:Rv0486;protein_id=Rv0486 ### -Chromosome ena gene 576787 577338 . + . ID=gene:Rv0487;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0487;logic_name=ena +Chromosome ena gene 576787 577338 . + . ID=gene:Rv0487;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0487;logic_name=ena Chromosome ena mRNA 576787 577338 . + . ID=transcript:Rv0487;Parent=gene:Rv0487;biotype=protein_coding;transcript_id=Rv0487 Chromosome ena exon 576787 577338 . + . Parent=transcript:Rv0487;Name=Rv0487-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0487-1;rank=1 Chromosome ena CDS 576787 577338 . + 0 ID=CDS:Rv0487;Parent=transcript:Rv0487;protein_id=Rv0487 ### -Chromosome ena gene 577664 578269 . + . ID=gene:Rv0488;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0488;logic_name=ena +Chromosome ena gene 577664 578269 . + . ID=gene:Rv0488;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0488;logic_name=ena Chromosome ena mRNA 577664 578269 . + . ID=transcript:Rv0488;Parent=gene:Rv0488;biotype=protein_coding;transcript_id=Rv0488 Chromosome ena exon 577664 578269 . + . Parent=transcript:Rv0488;Name=Rv0488-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0488-1;rank=1 Chromosome ena CDS 577664 578269 . + 0 ID=CDS:Rv0488;Parent=transcript:Rv0488;protein_id=Rv0488 ### -Chromosome ena gene 578426 579175 . + . ID=gene:Rv0489;Name=gpm1;biotype=protein_coding;description=Probable phosphoglycerate mutase 1 Gpm1 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM);gene_id=Rv0489;logic_name=ena +Chromosome ena gene 578426 579175 . + . ID=gene:Rv0489;Name=gpm1;biotype=protein_coding;description=Probable phosphoglycerate mutase 1 Gpm1 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM);gene_id=Rv0489;logic_name=ena Chromosome ena mRNA 578426 579175 . + . ID=transcript:Rv0489;Parent=gene:Rv0489;Name=gpm1-1;biotype=protein_coding;transcript_id=Rv0489 Chromosome ena exon 578426 579175 . + . Parent=transcript:Rv0489;Name=Rv0489-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0489-1;rank=1 Chromosome ena CDS 578426 579175 . + 0 ID=CDS:Rv0489;Parent=transcript:Rv0489;protein_id=Rv0489 ### -Chromosome ena gene 579349 580581 . + . ID=gene:Rv0490;Name=senX3;biotype=protein_coding;description=Putative two component sensor histidine kinase SenX3;gene_id=Rv0490;logic_name=ena +Chromosome ena gene 579349 580581 . + . ID=gene:Rv0490;Name=senX3;biotype=protein_coding;description=Putative two component sensor histidine kinase SenX3;gene_id=Rv0490;logic_name=ena Chromosome ena mRNA 579349 580581 . + . ID=transcript:Rv0490;Parent=gene:Rv0490;Name=senX3-1;biotype=protein_coding;transcript_id=Rv0490 Chromosome ena exon 579349 580581 . + . Parent=transcript:Rv0490;Name=Rv0490-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0490-1;rank=1 Chromosome ena CDS 579349 580581 . + 0 ID=CDS:Rv0490;Parent=transcript:Rv0490;protein_id=Rv0490 ### -Chromosome ena gene 580809 581492 . + . ID=gene:Rv0491;Name=regX3;biotype=protein_coding;description=Two component sensory transduction protein RegX3 (transcriptional regulatory protein) (probably LuxR-family);gene_id=Rv0491;logic_name=ena +Chromosome ena gene 580809 581492 . + . ID=gene:Rv0491;Name=regX3;biotype=protein_coding;description=Two component sensory transduction protein RegX3 (transcriptional regulatory protein) (probably LuxR-family);gene_id=Rv0491;logic_name=ena Chromosome ena mRNA 580809 581492 . + . ID=transcript:Rv0491;Parent=gene:Rv0491;Name=regX3-1;biotype=protein_coding;transcript_id=Rv0491 Chromosome ena exon 580809 581492 . + . Parent=transcript:Rv0491;Name=Rv0491-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0491-1;rank=1 Chromosome ena CDS 580809 581492 . + 0 ID=CDS:Rv0491;Parent=transcript:Rv0491;protein_id=Rv0491 ### -Chromosome ena gene 581489 583378 . - . ID=gene:Rv0492c;biotype=protein_coding;description=Probable oxidoreductase GMC-type;gene_id=Rv0492c;logic_name=ena +Chromosome ena gene 581489 583378 . - . ID=gene:Rv0492c;biotype=protein_coding;description=Probable oxidoreductase GMC-type;gene_id=Rv0492c;logic_name=ena Chromosome ena mRNA 581489 583378 . - . ID=transcript:Rv0492c;Parent=gene:Rv0492c;biotype=protein_coding;transcript_id=Rv0492c Chromosome ena exon 581489 583378 . - . Parent=transcript:Rv0492c;Name=Rv0492c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0492c-1;rank=1 Chromosome ena CDS 581489 583378 . - 0 ID=CDS:Rv0492c;Parent=transcript:Rv0492c;protein_id=Rv0492c ### -Chromosome ena gene 583375 583704 . - . ID=gene:Rv0492A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0492A;logic_name=ena +Chromosome ena gene 583375 583704 . - . ID=gene:Rv0492A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0492A;logic_name=ena Chromosome ena mRNA 583375 583704 . - . ID=transcript:Rv0492A;Parent=gene:Rv0492A;biotype=protein_coding;transcript_id=Rv0492A Chromosome ena exon 583375 583704 . - . Parent=transcript:Rv0492A;Name=Rv0492A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0492A-1;rank=1 Chromosome ena CDS 583375 583704 . - 0 ID=CDS:Rv0492A;Parent=transcript:Rv0492A;protein_id=Rv0492A ### -Chromosome ena gene 583701 584690 . - . ID=gene:Rv0493c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0493c;logic_name=ena +Chromosome ena gene 583701 584690 . - . ID=gene:Rv0493c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0493c;logic_name=ena Chromosome ena mRNA 583701 584690 . - . ID=transcript:Rv0493c;Parent=gene:Rv0493c;biotype=protein_coding;transcript_id=Rv0493c Chromosome ena exon 583701 584690 . - . Parent=transcript:Rv0493c;Name=Rv0493c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0493c-1;rank=1 Chromosome ena CDS 583701 584690 . - 0 ID=CDS:Rv0493c;Parent=transcript:Rv0493c;protein_id=Rv0493c ### -Chromosome ena gene 584695 585423 . + . ID=gene:Rv0494;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0494;logic_name=ena +Chromosome ena gene 584695 585423 . + . ID=gene:Rv0494;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0494;logic_name=ena Chromosome ena mRNA 584695 585423 . + . ID=transcript:Rv0494;Parent=gene:Rv0494;biotype=protein_coding;transcript_id=Rv0494 Chromosome ena exon 584695 585423 . + . Parent=transcript:Rv0494;Name=Rv0494-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0494-1;rank=1 Chromosome ena CDS 584695 585423 . + 0 ID=CDS:Rv0494;Parent=transcript:Rv0494;protein_id=Rv0494 ### -Chromosome ena gene 585424 586314 . - . ID=gene:Rv0495c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0495c;logic_name=ena +Chromosome ena gene 585424 586314 . - . ID=gene:Rv0495c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0495c;logic_name=ena Chromosome ena mRNA 585424 586314 . - . ID=transcript:Rv0495c;Parent=gene:Rv0495c;biotype=protein_coding;transcript_id=Rv0495c Chromosome ena exon 585424 586314 . - . Parent=transcript:Rv0495c;Name=Rv0495c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0495c-1;rank=1 Chromosome ena CDS 585424 586314 . - 0 ID=CDS:Rv0495c;Parent=transcript:Rv0495c;protein_id=Rv0495c ### -Chromosome ena gene 586394 587380 . + . ID=gene:Rv0496;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0496;logic_name=ena +Chromosome ena gene 586394 587380 . + . ID=gene:Rv0496;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0496;logic_name=ena Chromosome ena mRNA 586394 587380 . + . ID=transcript:Rv0496;Parent=gene:Rv0496;biotype=protein_coding;transcript_id=Rv0496 Chromosome ena exon 586394 587380 . + . Parent=transcript:Rv0496;Name=Rv0496-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0496-1;rank=1 Chromosome ena CDS 586394 587380 . + 0 ID=CDS:Rv0496;Parent=transcript:Rv0496;protein_id=Rv0496 ### -Chromosome ena gene 587377 588309 . + . ID=gene:Rv0497;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0497;logic_name=ena +Chromosome ena gene 587377 588309 . + . ID=gene:Rv0497;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0497;logic_name=ena Chromosome ena mRNA 587377 588309 . + . ID=transcript:Rv0497;Parent=gene:Rv0497;biotype=protein_coding;transcript_id=Rv0497 Chromosome ena exon 587377 588309 . + . Parent=transcript:Rv0497;Name=Rv0497-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0497-1;rank=1 Chromosome ena CDS 587377 588309 . + 0 ID=CDS:Rv0497;Parent=transcript:Rv0497;protein_id=Rv0497 ### -Chromosome ena gene 588325 589167 . + . ID=gene:Rv0498;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0498;logic_name=ena +Chromosome ena gene 588325 589167 . + . ID=gene:Rv0498;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0498;logic_name=ena Chromosome ena mRNA 588325 589167 . + . ID=transcript:Rv0498;Parent=gene:Rv0498;biotype=protein_coding;transcript_id=Rv0498 Chromosome ena exon 588325 589167 . + . Parent=transcript:Rv0498;Name=Rv0498-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0498-1;rank=1 Chromosome ena CDS 588325 589167 . + 0 ID=CDS:Rv0498;Parent=transcript:Rv0498;protein_id=Rv0498 ### -Chromosome ena gene 589183 590058 . + . ID=gene:Rv0499;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0499;logic_name=ena +Chromosome ena gene 589183 590058 . + . ID=gene:Rv0499;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0499;logic_name=ena Chromosome ena mRNA 589183 590058 . + . ID=transcript:Rv0499;Parent=gene:Rv0499;biotype=protein_coding;transcript_id=Rv0499 Chromosome ena exon 589183 590058 . + . Parent=transcript:Rv0499;Name=Rv0499-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0499-1;rank=1 Chromosome ena CDS 589183 590058 . + 0 ID=CDS:Rv0499;Parent=transcript:Rv0499;protein_id=Rv0499 ### -Chromosome ena gene 590083 590970 . + . ID=gene:Rv0500;Name=proC;biotype=protein_coding;description=Probable pyrroline-5-carboxylate reductase ProC (P5CR) (P5C reductase);gene_id=Rv0500;logic_name=ena +Chromosome ena gene 590083 590970 . + . ID=gene:Rv0500;Name=proC;biotype=protein_coding;description=Probable pyrroline-5-carboxylate reductase ProC (P5CR) (P5C reductase);gene_id=Rv0500;logic_name=ena Chromosome ena mRNA 590083 590970 . + . ID=transcript:Rv0500;Parent=gene:Rv0500;Name=proC-1;biotype=protein_coding;transcript_id=Rv0500 Chromosome ena exon 590083 590970 . + . Parent=transcript:Rv0500;Name=Rv0500-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0500-1;rank=1 Chromosome ena CDS 590083 590970 . + 0 ID=CDS:Rv0500;Parent=transcript:Rv0500;protein_id=Rv0500 ### -Chromosome ena gene 591111 591347 . + . ID=gene:Rv0500A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0500A;logic_name=ena +Chromosome ena gene 591111 591347 . + . ID=gene:Rv0500A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0500A;logic_name=ena Chromosome ena mRNA 591111 591347 . + . ID=transcript:Rv0500A;Parent=gene:Rv0500A;biotype=protein_coding;transcript_id=Rv0500A Chromosome ena exon 591111 591347 . + . Parent=transcript:Rv0500A;Name=Rv0500A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0500A-1;rank=1 Chromosome ena CDS 591111 591347 . + 0 ID=CDS:Rv0500A;Parent=transcript:Rv0500A;protein_id=Rv0500A ### -Chromosome ena gene 591475 591576 . + . ID=gene:Rv0500B;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0500B;logic_name=ena +Chromosome ena gene 591475 591576 . + . ID=gene:Rv0500B;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0500B;logic_name=ena Chromosome ena mRNA 591475 591576 . + . ID=transcript:Rv0500B;Parent=gene:Rv0500B;biotype=protein_coding;transcript_id=Rv0500B Chromosome ena exon 591475 591576 . + . Parent=transcript:Rv0500B;Name=Rv0500B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0500B-1;rank=1 Chromosome ena CDS 591475 591576 . + 0 ID=CDS:Rv0500B;Parent=transcript:Rv0500B;protein_id=Rv0500B ### -Chromosome ena gene 591654 592784 . + . ID=gene:Rv0501;Name=galE2;biotype=protein_coding;description=Possible UDP-glucose 4-epimerase GalE2 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv0501;logic_name=ena +Chromosome ena gene 591654 592784 . + . ID=gene:Rv0501;Name=galE2;biotype=protein_coding;description=Possible UDP-glucose 4-epimerase GalE2 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv0501;logic_name=ena Chromosome ena mRNA 591654 592784 . + . ID=transcript:Rv0501;Parent=gene:Rv0501;Name=galE2-1;biotype=protein_coding;transcript_id=Rv0501 Chromosome ena exon 591654 592784 . + . Parent=transcript:Rv0501;Name=Rv0501-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0501-1;rank=1 Chromosome ena CDS 591654 592784 . + 0 ID=CDS:Rv0501;Parent=transcript:Rv0501;protein_id=Rv0501 ### -Chromosome ena gene 592791 593867 . + . ID=gene:Rv0502;biotype=protein_coding;description=Conserved protein;gene_id=Rv0502;logic_name=ena +Chromosome ena gene 592791 593867 . + . ID=gene:Rv0502;biotype=protein_coding;description=Conserved protein;gene_id=Rv0502;logic_name=ena Chromosome ena mRNA 592791 593867 . + . ID=transcript:Rv0502;Parent=gene:Rv0502;biotype=protein_coding;transcript_id=Rv0502 Chromosome ena exon 592791 593867 . + . Parent=transcript:Rv0502;Name=Rv0502-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0502-1;rank=1 Chromosome ena CDS 592791 593867 . + 0 ID=CDS:Rv0502;Parent=transcript:Rv0502;protein_id=Rv0502 ### -Chromosome ena gene 593871 594779 . - . ID=gene:Rv0503c;Name=cmaA2;biotype=protein_coding;description=Cyclopropane-fatty-acyl-phospholipid synthase 2 CmaA2 (cyclopropane fatty acid synthase) (CFA synthase) (cyclopropane mycolic acid synthase 2) (mycolic acid trans-cyclopropane synthetase);gene_id=Rv0503c;logic_name=ena +Chromosome ena gene 593871 594779 . - . ID=gene:Rv0503c;Name=cmaA2;biotype=protein_coding;description=Cyclopropane-fatty-acyl-phospholipid synthase 2 CmaA2 (cyclopropane fatty acid synthase) (CFA synthase) (cyclopropane mycolic acid synthase 2) (mycolic acid trans-cyclopropane synthetase);gene_id=Rv0503c;logic_name=ena Chromosome ena mRNA 593871 594779 . - . ID=transcript:Rv0503c;Parent=gene:Rv0503c;Name=cmaA2-1;biotype=protein_coding;transcript_id=Rv0503c Chromosome ena exon 593871 594779 . - . Parent=transcript:Rv0503c;Name=Rv0503c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0503c-1;rank=1 Chromosome ena CDS 593871 594779 . - 0 ID=CDS:Rv0503c;Parent=transcript:Rv0503c;protein_id=Rv0503c ### -Chromosome ena gene 594802 595302 . - . ID=gene:Rv0504c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0504c;logic_name=ena +Chromosome ena gene 594802 595302 . - . ID=gene:Rv0504c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0504c;logic_name=ena Chromosome ena mRNA 594802 595302 . - . ID=transcript:Rv0504c;Parent=gene:Rv0504c;biotype=protein_coding;transcript_id=Rv0504c Chromosome ena exon 594802 595302 . - . Parent=transcript:Rv0504c;Name=Rv0504c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0504c-1;rank=1 Chromosome ena CDS 594802 595302 . - 0 ID=CDS:Rv0504c;Parent=transcript:Rv0504c;protein_id=Rv0504c ### -Chromosome ena gene 595464 596585 . - . ID=gene:Rv0505c;Name=serB1;biotype=protein_coding;description=Possible phosphoserine phosphatase SerB1 (PSP) (O-phosphoserine phosphohydrolase) (pspase);gene_id=Rv0505c;logic_name=ena +Chromosome ena gene 595464 596585 . - . ID=gene:Rv0505c;Name=serB1;biotype=protein_coding;description=Possible phosphoserine phosphatase SerB1 (PSP) (O-phosphoserine phosphohydrolase) (pspase);gene_id=Rv0505c;logic_name=ena Chromosome ena mRNA 595464 596585 . - . ID=transcript:Rv0505c;Parent=gene:Rv0505c;Name=serB1-1;biotype=protein_coding;transcript_id=Rv0505c Chromosome ena exon 595464 596585 . - . Parent=transcript:Rv0505c;Name=Rv0505c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0505c-1;rank=1 Chromosome ena CDS 595464 596585 . - 0 ID=CDS:Rv0505c;Parent=transcript:Rv0505c;protein_id=Rv0505c ### -Chromosome ena gene 596759 597202 . + . ID=gene:Rv0506;Name=mmpS2;biotype=protein_coding;description=Probable conserved membrane protein MmpS2;gene_id=Rv0506;logic_name=ena +Chromosome ena gene 596759 597202 . + . ID=gene:Rv0506;Name=mmpS2;biotype=protein_coding;description=Probable conserved membrane protein MmpS2;gene_id=Rv0506;logic_name=ena Chromosome ena mRNA 596759 597202 . + . ID=transcript:Rv0506;Parent=gene:Rv0506;Name=mmpS2-1;biotype=protein_coding;transcript_id=Rv0506 Chromosome ena exon 596759 597202 . + . Parent=transcript:Rv0506;Name=Rv0506-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0506-1;rank=1 Chromosome ena CDS 596759 597202 . + 0 ID=CDS:Rv0506;Parent=transcript:Rv0506;protein_id=Rv0506 ### -Chromosome ena gene 597199 600105 . + . ID=gene:Rv0507;Name=mmpL2;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL2;gene_id=Rv0507;logic_name=ena +Chromosome ena gene 597199 600105 . + . ID=gene:Rv0507;Name=mmpL2;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL2;gene_id=Rv0507;logic_name=ena Chromosome ena mRNA 597199 600105 . + . ID=transcript:Rv0507;Parent=gene:Rv0507;Name=mmpL2-1;biotype=protein_coding;transcript_id=Rv0507 Chromosome ena exon 597199 600105 . + . Parent=transcript:Rv0507;Name=Rv0507-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0507-1;rank=1 Chromosome ena CDS 597199 600105 . + 0 ID=CDS:Rv0507;Parent=transcript:Rv0507;protein_id=Rv0507 ### -Chromosome ena gene 600098 600391 . + . ID=gene:Rv0508;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0508;logic_name=ena +Chromosome ena gene 600098 600391 . + . ID=gene:Rv0508;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0508;logic_name=ena Chromosome ena mRNA 600098 600391 . + . ID=transcript:Rv0508;Parent=gene:Rv0508;biotype=protein_coding;transcript_id=Rv0508 Chromosome ena exon 600098 600391 . + . Parent=transcript:Rv0508;Name=Rv0508-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0508-1;rank=1 Chromosome ena CDS 600098 600391 . + 0 ID=CDS:Rv0508;Parent=transcript:Rv0508;protein_id=Rv0508 ### -Chromosome ena gene 600441 601847 . + . ID=gene:Rv0509;Name=hemA;biotype=protein_coding;description=Probable glutamyl-tRNA reductase HemA (GLUTR);gene_id=Rv0509;logic_name=ena +Chromosome ena gene 600441 601847 . + . ID=gene:Rv0509;Name=hemA;biotype=protein_coding;description=Probable glutamyl-tRNA reductase HemA (GLUTR);gene_id=Rv0509;logic_name=ena Chromosome ena mRNA 600441 601847 . + . ID=transcript:Rv0509;Parent=gene:Rv0509;Name=hemA-1;biotype=protein_coding;transcript_id=Rv0509 Chromosome ena exon 600441 601847 . + . Parent=transcript:Rv0509;Name=Rv0509-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0509-1;rank=1 Chromosome ena CDS 600441 601847 . + 0 ID=CDS:Rv0509;Parent=transcript:Rv0509;protein_id=Rv0509 ### -Chromosome ena gene 601857 602786 . + . ID=gene:Rv0510;Name=hemC;biotype=protein_coding;description=Probable porphobilinogen deaminase HemC (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase);gene_id=Rv0510;logic_name=ena +Chromosome ena gene 601857 602786 . + . ID=gene:Rv0510;Name=hemC;biotype=protein_coding;description=Probable porphobilinogen deaminase HemC (PBG) (hydroxymethylbilane synthase) (HMBS) (pre-uroporphyrinogen synthase);gene_id=Rv0510;logic_name=ena Chromosome ena mRNA 601857 602786 . + . ID=transcript:Rv0510;Parent=gene:Rv0510;Name=hemC-1;biotype=protein_coding;transcript_id=Rv0510 Chromosome ena exon 601857 602786 . + . Parent=transcript:Rv0510;Name=Rv0510-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0510-1;rank=1 Chromosome ena CDS 601857 602786 . + 0 ID=CDS:Rv0510;Parent=transcript:Rv0510;protein_id=Rv0510 ### -Chromosome ena gene 602819 604516 . + . ID=gene:Rv0511;Name=hemD;biotype=protein_coding;description=Probable uroporphyrin-III C-methyltransferase HemD (uroporphyrinogen III methylase) (urogen III methylase) (SUMT) (urogen III methylase) (UROM);gene_id=Rv0511;logic_name=ena +Chromosome ena gene 602819 604516 . + . ID=gene:Rv0511;Name=hemD;biotype=protein_coding;description=Probable uroporphyrin-III C-methyltransferase HemD (uroporphyrinogen III methylase) (urogen III methylase) (SUMT) (urogen III methylase) (UROM);gene_id=Rv0511;logic_name=ena Chromosome ena mRNA 602819 604516 . + . ID=transcript:Rv0511;Parent=gene:Rv0511;Name=hemD-1;biotype=protein_coding;transcript_id=Rv0511 Chromosome ena exon 602819 604516 . + . Parent=transcript:Rv0511;Name=Rv0511-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0511-1;rank=1 Chromosome ena CDS 602819 604516 . + 0 ID=CDS:Rv0511;Parent=transcript:Rv0511;protein_id=Rv0511 ### -Chromosome ena gene 604602 605591 . + . ID=gene:Rv0512;Name=hemB;biotype=protein_coding;description=Probable delta-aminolevulinic acid dehydratase HemB (porphobilinogen synthase) (ALAD) (ALADH);gene_id=Rv0512;logic_name=ena +Chromosome ena gene 604602 605591 . + . ID=gene:Rv0512;Name=hemB;biotype=protein_coding;description=Probable delta-aminolevulinic acid dehydratase HemB (porphobilinogen synthase) (ALAD) (ALADH);gene_id=Rv0512;logic_name=ena Chromosome ena mRNA 604602 605591 . + . ID=transcript:Rv0512;Parent=gene:Rv0512;Name=hemB-1;biotype=protein_coding;transcript_id=Rv0512 Chromosome ena exon 604602 605591 . + . Parent=transcript:Rv0512;Name=Rv0512-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0512-1;rank=1 Chromosome ena CDS 604602 605591 . + 0 ID=CDS:Rv0512;Parent=transcript:Rv0512;protein_id=Rv0512 ### -Chromosome ena gene 605604 606152 . + . ID=gene:Rv0513;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0513;logic_name=ena +Chromosome ena gene 605604 606152 . + . ID=gene:Rv0513;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0513;logic_name=ena Chromosome ena mRNA 605604 606152 . + . ID=transcript:Rv0513;Parent=gene:Rv0513;biotype=protein_coding;transcript_id=Rv0513 Chromosome ena exon 605604 606152 . + . Parent=transcript:Rv0513;Name=Rv0513-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0513-1;rank=1 Chromosome ena CDS 605604 606152 . + 0 ID=CDS:Rv0513;Parent=transcript:Rv0513;protein_id=Rv0513 ### -Chromosome ena gene 606149 606448 . + . ID=gene:Rv0514;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0514;logic_name=ena +Chromosome ena gene 606149 606448 . + . ID=gene:Rv0514;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv0514;logic_name=ena Chromosome ena mRNA 606149 606448 . + . ID=transcript:Rv0514;Parent=gene:Rv0514;biotype=protein_coding;transcript_id=Rv0514 Chromosome ena exon 606149 606448 . + . Parent=transcript:Rv0514;Name=Rv0514-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0514-1;rank=1 Chromosome ena CDS 606149 606448 . + 0 ID=CDS:Rv0514;Parent=transcript:Rv0514;protein_id=Rv0514 ### -Chromosome ena gene 606551 608062 . + . ID=gene:Rv0515;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0515;logic_name=ena +Chromosome ena gene 606551 608062 . + . ID=gene:Rv0515;biotype=protein_coding;description=Conserved 13E12 repeat family protein;gene_id=Rv0515;logic_name=ena Chromosome ena mRNA 606551 608062 . + . ID=transcript:Rv0515;Parent=gene:Rv0515;biotype=protein_coding;transcript_id=Rv0515 Chromosome ena exon 606551 608062 . + . Parent=transcript:Rv0515;Name=Rv0515-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0515-1;rank=1 Chromosome ena CDS 606551 608062 . + 0 ID=CDS:Rv0515;Parent=transcript:Rv0515;protein_id=Rv0515 ### -Chromosome ena gene 608059 608535 . - . ID=gene:Rv0516c;biotype=protein_coding;description=Possible anti-anti-sigma factor;gene_id=Rv0516c;logic_name=ena +Chromosome ena gene 608059 608535 . - . ID=gene:Rv0516c;biotype=protein_coding;description=Possible anti-anti-sigma factor;gene_id=Rv0516c;logic_name=ena Chromosome ena mRNA 608059 608535 . - . ID=transcript:Rv0516c;Parent=gene:Rv0516c;biotype=protein_coding;transcript_id=Rv0516c Chromosome ena exon 608059 608535 . - . Parent=transcript:Rv0516c;Name=Rv0516c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0516c-1;rank=1 Chromosome ena CDS 608059 608535 . - 0 ID=CDS:Rv0516c;Parent=transcript:Rv0516c;protein_id=Rv0516c ### -Chromosome ena gene 608746 610056 . + . ID=gene:Rv0517;biotype=protein_coding;description=Possible membrane acyltransferase;gene_id=Rv0517;logic_name=ena +Chromosome ena gene 608746 610056 . + . ID=gene:Rv0517;biotype=protein_coding;description=Possible membrane acyltransferase;gene_id=Rv0517;logic_name=ena Chromosome ena mRNA 608746 610056 . + . ID=transcript:Rv0517;Parent=gene:Rv0517;biotype=protein_coding;transcript_id=Rv0517 Chromosome ena exon 608746 610056 . + . Parent=transcript:Rv0517;Name=Rv0517-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0517-1;rank=1 Chromosome ena CDS 608746 610056 . + 0 ID=CDS:Rv0517;Parent=transcript:Rv0517;protein_id=Rv0517 ### -Chromosome ena gene 610188 610883 . + . ID=gene:Rv0518;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0518;logic_name=ena +Chromosome ena gene 610188 610883 . + . ID=gene:Rv0518;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0518;logic_name=ena Chromosome ena mRNA 610188 610883 . + . ID=transcript:Rv0518;Parent=gene:Rv0518;biotype=protein_coding;transcript_id=Rv0518 Chromosome ena exon 610188 610883 . + . Parent=transcript:Rv0518;Name=Rv0518-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0518-1;rank=1 Chromosome ena CDS 610188 610883 . + 0 ID=CDS:Rv0518;Parent=transcript:Rv0518;protein_id=Rv0518 ### -Chromosome ena gene 611172 612074 . - . ID=gene:Rv0519c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0519c;logic_name=ena +Chromosome ena gene 611172 612074 . - . ID=gene:Rv0519c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0519c;logic_name=ena Chromosome ena mRNA 611172 612074 . - . ID=transcript:Rv0519c;Parent=gene:Rv0519c;biotype=protein_coding;transcript_id=Rv0519c Chromosome ena exon 611172 612074 . - . Parent=transcript:Rv0519c;Name=Rv0519c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0519c-1;rank=1 Chromosome ena CDS 611172 612074 . - 0 ID=CDS:Rv0519c;Parent=transcript:Rv0519c;protein_id=Rv0519c ### -Chromosome ena gene 612255 612605 . + . ID=gene:Rv0520;biotype=protein_coding;description=Possible methyltransferase/methylase (fragment);gene_id=Rv0520;logic_name=ena +Chromosome ena gene 612255 612605 . + . ID=gene:Rv0520;biotype=protein_coding;description=Possible methyltransferase/methylase (fragment);gene_id=Rv0520;logic_name=ena Chromosome ena mRNA 612255 612605 . + . ID=transcript:Rv0520;Parent=gene:Rv0520;biotype=protein_coding;transcript_id=Rv0520 Chromosome ena exon 612255 612605 . + . Parent=transcript:Rv0520;Name=Rv0520-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0520-1;rank=1 Chromosome ena CDS 612255 612605 . + 0 ID=CDS:Rv0520;Parent=transcript:Rv0520;protein_id=Rv0520 ### -Chromosome ena gene 612598 612903 . + . ID=gene:Rv0521;biotype=protein_coding;description=Possible methyltransferase/methylase (fragment);gene_id=Rv0521;logic_name=ena +Chromosome ena gene 612598 612903 . + . ID=gene:Rv0521;biotype=protein_coding;description=Possible methyltransferase/methylase (fragment);gene_id=Rv0521;logic_name=ena Chromosome ena mRNA 612598 612903 . + . ID=transcript:Rv0521;Parent=gene:Rv0521;biotype=protein_coding;transcript_id=Rv0521 Chromosome ena exon 612598 612903 . + . Parent=transcript:Rv0521;Name=Rv0521-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0521-1;rank=1 Chromosome ena CDS 612598 612903 . + 0 ID=CDS:Rv0521;Parent=transcript:Rv0521;protein_id=Rv0521 ### -Chromosome ena gene 613038 614342 . + . ID=gene:Rv0522;Name=gabP;biotype=protein_coding;description=Probable GABA permease GabP (4-amino butyrate transport carrier) (GAMA-aminobutyrate permease);gene_id=Rv0522;logic_name=ena +Chromosome ena gene 613038 614342 . + . ID=gene:Rv0522;Name=gabP;biotype=protein_coding;description=Probable GABA permease GabP (4-amino butyrate transport carrier) (GAMA-aminobutyrate permease);gene_id=Rv0522;logic_name=ena Chromosome ena mRNA 613038 614342 . + . ID=transcript:Rv0522;Parent=gene:Rv0522;Name=gabP-1;biotype=protein_coding;transcript_id=Rv0522 Chromosome ena exon 613038 614342 . + . Parent=transcript:Rv0522;Name=Rv0522-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0522-1;rank=1 Chromosome ena CDS 613038 614342 . + 0 ID=CDS:Rv0522;Parent=transcript:Rv0522;protein_id=Rv0522 ### -Chromosome ena gene 614326 614721 . - . ID=gene:Rv0523c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0523c;logic_name=ena +Chromosome ena gene 614326 614721 . - . ID=gene:Rv0523c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0523c;logic_name=ena Chromosome ena mRNA 614326 614721 . - . ID=transcript:Rv0523c;Parent=gene:Rv0523c;biotype=protein_coding;transcript_id=Rv0523c Chromosome ena exon 614326 614721 . - . Parent=transcript:Rv0523c;Name=Rv0523c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0523c-1;rank=1 Chromosome ena CDS 614326 614721 . - 0 ID=CDS:Rv0523c;Parent=transcript:Rv0523c;protein_id=Rv0523c ### -Chromosome ena gene 614835 616223 . + . ID=gene:Rv0524;Name=hemL;biotype=protein_coding;description=Probable glutamate-1-semialdehyde 2%2C1-aminomutase HemL (GSA) (glutamate-1-semialdehyde aminotransferase) (GSA-at);gene_id=Rv0524;logic_name=ena +Chromosome ena gene 614835 616223 . + . ID=gene:Rv0524;Name=hemL;biotype=protein_coding;description=Probable glutamate-1-semialdehyde 2%2C1-aminomutase HemL (GSA) (glutamate-1-semialdehyde aminotransferase) (GSA-at);gene_id=Rv0524;logic_name=ena Chromosome ena mRNA 614835 616223 . + . ID=transcript:Rv0524;Parent=gene:Rv0524;Name=hemL-1;biotype=protein_coding;transcript_id=Rv0524 Chromosome ena exon 614835 616223 . + . Parent=transcript:Rv0524;Name=Rv0524-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0524-1;rank=1 Chromosome ena CDS 614835 616223 . + 0 ID=CDS:Rv0524;Parent=transcript:Rv0524;protein_id=Rv0524 ### -Chromosome ena gene 616223 616831 . + . ID=gene:Rv0525;biotype=protein_coding;description=Conserved protein;gene_id=Rv0525;logic_name=ena +Chromosome ena gene 616223 616831 . + . ID=gene:Rv0525;biotype=protein_coding;description=Conserved protein;gene_id=Rv0525;logic_name=ena Chromosome ena mRNA 616223 616831 . + . ID=transcript:Rv0525;Parent=gene:Rv0525;biotype=protein_coding;transcript_id=Rv0525 Chromosome ena exon 616223 616831 . + . Parent=transcript:Rv0525;Name=Rv0525-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0525-1;rank=1 Chromosome ena CDS 616223 616831 . + 0 ID=CDS:Rv0525;Parent=transcript:Rv0525;protein_id=Rv0525 ### -Chromosome ena gene 616846 617496 . + . ID=gene:Rv0526;biotype=protein_coding;description=Possible thioredoxin protein (thiol-disulfide interchange protein);gene_id=Rv0526;logic_name=ena +Chromosome ena gene 616846 617496 . + . ID=gene:Rv0526;biotype=protein_coding;description=Possible thioredoxin protein (thiol-disulfide interchange protein);gene_id=Rv0526;logic_name=ena Chromosome ena mRNA 616846 617496 . + . ID=transcript:Rv0526;Parent=gene:Rv0526;biotype=protein_coding;transcript_id=Rv0526 Chromosome ena exon 616846 617496 . + . Parent=transcript:Rv0526;Name=Rv0526-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0526-1;rank=1 Chromosome ena CDS 616846 617496 . + 0 ID=CDS:Rv0526;Parent=transcript:Rv0526;protein_id=Rv0526 ### -Chromosome ena gene 617493 618272 . + . ID=gene:Rv0527;Name=ccdA;biotype=protein_coding;description=Possible cytochrome C-type biogenesis protein CcdA;gene_id=Rv0527;logic_name=ena +Chromosome ena gene 617493 618272 . + . ID=gene:Rv0527;Name=ccdA;biotype=protein_coding;description=Possible cytochrome C-type biogenesis protein CcdA;gene_id=Rv0527;logic_name=ena Chromosome ena mRNA 617493 618272 . + . ID=transcript:Rv0527;Parent=gene:Rv0527;Name=ccdA-1;biotype=protein_coding;transcript_id=Rv0527 Chromosome ena exon 617493 618272 . + . Parent=transcript:Rv0527;Name=Rv0527-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0527-1;rank=1 Chromosome ena CDS 617493 618272 . + 0 ID=CDS:Rv0527;Parent=transcript:Rv0527;protein_id=Rv0527 ### -Chromosome ena gene 618305 619894 . + . ID=gene:Rv0528;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0528;logic_name=ena +Chromosome ena gene 618305 619894 . + . ID=gene:Rv0528;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0528;logic_name=ena Chromosome ena mRNA 618305 619894 . + . ID=transcript:Rv0528;Parent=gene:Rv0528;biotype=protein_coding;transcript_id=Rv0528 Chromosome ena exon 618305 619894 . + . Parent=transcript:Rv0528;Name=Rv0528-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0528-1;rank=1 Chromosome ena CDS 618305 619894 . + 0 ID=CDS:Rv0528;Parent=transcript:Rv0528;protein_id=Rv0528 ### -Chromosome ena gene 619891 620865 . + . ID=gene:Rv0529;Name=ccsA;biotype=protein_coding;description=Possible cytochrome C-type biogenesis protein CcsA;gene_id=Rv0529;logic_name=ena +Chromosome ena gene 619891 620865 . + . ID=gene:Rv0529;Name=ccsA;biotype=protein_coding;description=Possible cytochrome C-type biogenesis protein CcsA;gene_id=Rv0529;logic_name=ena Chromosome ena mRNA 619891 620865 . + . ID=transcript:Rv0529;Parent=gene:Rv0529;Name=ccsA-1;biotype=protein_coding;transcript_id=Rv0529 Chromosome ena exon 619891 620865 . + . Parent=transcript:Rv0529;Name=Rv0529-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0529-1;rank=1 Chromosome ena CDS 619891 620865 . + 0 ID=CDS:Rv0529;Parent=transcript:Rv0529;protein_id=Rv0529 ### -Chromosome ena gene 620907 622124 . + . ID=gene:Rv0530;biotype=protein_coding;description=Conserved protein;gene_id=Rv0530;logic_name=ena +Chromosome ena gene 620907 622124 . + . ID=gene:Rv0530;biotype=protein_coding;description=Conserved protein;gene_id=Rv0530;logic_name=ena Chromosome ena mRNA 620907 622124 . + . ID=transcript:Rv0530;Parent=gene:Rv0530;biotype=protein_coding;transcript_id=Rv0530 Chromosome ena exon 620907 622124 . + . Parent=transcript:Rv0530;Name=Rv0530-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0530-1;rank=1 Chromosome ena CDS 620907 622124 . + 0 ID=CDS:Rv0530;Parent=transcript:Rv0530;protein_id=Rv0530 ### -Chromosome ena gene 622121 622282 . - . ID=gene:Rv0530A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0530A;logic_name=ena +Chromosome ena gene 622121 622282 . - . ID=gene:Rv0530A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0530A;logic_name=ena Chromosome ena mRNA 622121 622282 . - . ID=transcript:Rv0530A;Parent=gene:Rv0530A;biotype=protein_coding;transcript_id=Rv0530A Chromosome ena exon 622121 622282 . - . Parent=transcript:Rv0530A;Name=Rv0530A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0530A-1;rank=1 Chromosome ena CDS 622121 622282 . - 0 ID=CDS:Rv0530A;Parent=transcript:Rv0530A;protein_id=Rv0530A ### -Chromosome ena gene 622329 622646 . + . ID=gene:Rv0531;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0531;logic_name=ena +Chromosome ena gene 622329 622646 . + . ID=gene:Rv0531;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0531;logic_name=ena Chromosome ena mRNA 622329 622646 . + . ID=transcript:Rv0531;Parent=gene:Rv0531;biotype=protein_coding;transcript_id=Rv0531 Chromosome ena exon 622329 622646 . + . Parent=transcript:Rv0531;Name=Rv0531-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0531-1;rank=1 Chromosome ena CDS 622329 622646 . + 0 ID=CDS:Rv0531;Parent=transcript:Rv0531;protein_id=Rv0531 ### -Chromosome ena gene 622793 624577 . + . ID=gene:Rv0532;Name=PE_PGRS6;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS6;gene_id=Rv0532;logic_name=ena +Chromosome ena gene 622793 624577 . + . ID=gene:Rv0532;Name=PE_PGRS6;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS6;gene_id=Rv0532;logic_name=ena Chromosome ena mRNA 622793 624577 . + . ID=transcript:Rv0532;Parent=gene:Rv0532;Name=PE_PGRS6-1;biotype=protein_coding;transcript_id=Rv0532 Chromosome ena exon 622793 624577 . + . Parent=transcript:Rv0532;Name=Rv0532-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0532-1;rank=1 Chromosome ena CDS 622793 624577 . + 0 ID=CDS:Rv0532;Parent=transcript:Rv0532;protein_id=Rv0532 ### -Chromosome ena gene 624473 625480 . - . ID=gene:Rv0533c;Name=fabH;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier-protein] synthase III FabH (beta-ketoacyl-ACP synthase III) (KAS III);gene_id=Rv0533c;logic_name=ena +Chromosome ena gene 624473 625480 . - . ID=gene:Rv0533c;Name=fabH;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier-protein] synthase III FabH (beta-ketoacyl-ACP synthase III) (KAS III);gene_id=Rv0533c;logic_name=ena Chromosome ena mRNA 624473 625480 . - . ID=transcript:Rv0533c;Parent=gene:Rv0533c;Name=fabH-1;biotype=protein_coding;transcript_id=Rv0533c Chromosome ena exon 624473 625480 . - . Parent=transcript:Rv0533c;Name=Rv0533c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0533c-1;rank=1 Chromosome ena CDS 624473 625480 . - 0 ID=CDS:Rv0533c;Parent=transcript:Rv0533c;protein_id=Rv0533c ### -Chromosome ena gene 625562 626440 . - . ID=gene:Rv0534c;Name=menA;biotype=protein_coding;description=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase MenA (DHNA-octaprenyltransferase);gene_id=Rv0534c;logic_name=ena +Chromosome ena gene 625562 626440 . - . ID=gene:Rv0534c;Name=menA;biotype=protein_coding;description=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase MenA (DHNA-octaprenyltransferase);gene_id=Rv0534c;logic_name=ena Chromosome ena mRNA 625562 626440 . - . ID=transcript:Rv0534c;Parent=gene:Rv0534c;Name=menA-1;biotype=protein_coding;transcript_id=Rv0534c Chromosome ena exon 625562 626440 . - . Parent=transcript:Rv0534c;Name=Rv0534c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0534c-1;rank=1 Chromosome ena CDS 625562 626440 . - 0 ID=CDS:Rv0534c;Parent=transcript:Rv0534c;protein_id=Rv0534c ### -Chromosome ena gene 626457 627251 . + . ID=gene:Rv0535;Name=pnp;biotype=protein_coding;description=Probable 5'-methylthioadenosine phosphorylase Pnp (MTA phosphorylase);gene_id=Rv0535;logic_name=ena +Chromosome ena gene 626457 627251 . + . ID=gene:Rv0535;Name=pnp;biotype=protein_coding;description=Probable 5'-methylthioadenosine phosphorylase Pnp (MTA phosphorylase);gene_id=Rv0535;logic_name=ena Chromosome ena mRNA 626457 627251 . + . ID=transcript:Rv0535;Parent=gene:Rv0535;Name=pnp-1;biotype=protein_coding;transcript_id=Rv0535 Chromosome ena exon 626457 627251 . + . Parent=transcript:Rv0535;Name=Rv0535-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0535-1;rank=1 Chromosome ena CDS 626457 627251 . + 0 ID=CDS:Rv0535;Parent=transcript:Rv0535;protein_id=Rv0535 ### -Chromosome ena gene 627248 628288 . + . ID=gene:Rv0536;Name=galE3;biotype=protein_coding;description=Probable UDP-glucose 4-epimerase GalE3 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv0536;logic_name=ena +Chromosome ena gene 627248 628288 . + . ID=gene:Rv0536;Name=galE3;biotype=protein_coding;description=Probable UDP-glucose 4-epimerase GalE3 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv0536;logic_name=ena Chromosome ena mRNA 627248 628288 . + . ID=transcript:Rv0536;Parent=gene:Rv0536;Name=galE3-1;biotype=protein_coding;transcript_id=Rv0536 Chromosome ena exon 627248 628288 . + . Parent=transcript:Rv0536;Name=Rv0536-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0536-1;rank=1 Chromosome ena CDS 627248 628288 . + 0 ID=CDS:Rv0536;Parent=transcript:Rv0536;protein_id=Rv0536 ### -Chromosome ena gene 628298 629731 . - . ID=gene:Rv0537c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0537c;logic_name=ena +Chromosome ena gene 628298 629731 . - . ID=gene:Rv0537c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0537c;logic_name=ena Chromosome ena mRNA 628298 629731 . - . ID=transcript:Rv0537c;Parent=gene:Rv0537c;biotype=protein_coding;transcript_id=Rv0537c Chromosome ena exon 628298 629731 . - . Parent=transcript:Rv0537c;Name=Rv0537c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0537c-1;rank=1 Chromosome ena CDS 628298 629731 . - 0 ID=CDS:Rv0537c;Parent=transcript:Rv0537c;protein_id=Rv0537c ### -Chromosome ena gene 630040 631686 . + . ID=gene:Rv0538;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0538;logic_name=ena +Chromosome ena gene 630040 631686 . + . ID=gene:Rv0538;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv0538;logic_name=ena Chromosome ena mRNA 630040 631686 . + . ID=transcript:Rv0538;Parent=gene:Rv0538;biotype=protein_coding;transcript_id=Rv0538 Chromosome ena exon 630040 631686 . + . Parent=transcript:Rv0538;Name=Rv0538-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0538-1;rank=1 Chromosome ena CDS 630040 631686 . + 0 ID=CDS:Rv0538;Parent=transcript:Rv0538;protein_id=Rv0538 ### -Chromosome ena gene 631743 632375 . + . ID=gene:Rv0539;biotype=protein_coding;description=Probable dolichyl-phosphate sugar synthase (dolichol-phosphate sugar synthetase) (dolichol-phosphate sugar transferase) (sugar phosphoryldolichol synthase);gene_id=Rv0539;logic_name=ena +Chromosome ena gene 631743 632375 . + . ID=gene:Rv0539;biotype=protein_coding;description=Probable dolichyl-phosphate sugar synthase (dolichol-phosphate sugar synthetase) (dolichol-phosphate sugar transferase) (sugar phosphoryldolichol synthase);gene_id=Rv0539;logic_name=ena Chromosome ena mRNA 631743 632375 . + . ID=transcript:Rv0539;Parent=gene:Rv0539;biotype=protein_coding;transcript_id=Rv0539 Chromosome ena exon 631743 632375 . + . Parent=transcript:Rv0539;Name=Rv0539-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0539-1;rank=1 Chromosome ena CDS 631743 632375 . + 0 ID=CDS:Rv0539;Parent=transcript:Rv0539;protein_id=Rv0539 ### -Chromosome ena gene 632372 633034 . + . ID=gene:Rv0540;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0540;logic_name=ena +Chromosome ena gene 632372 633034 . + . ID=gene:Rv0540;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0540;logic_name=ena Chromosome ena mRNA 632372 633034 . + . ID=transcript:Rv0540;Parent=gene:Rv0540;biotype=protein_coding;transcript_id=Rv0540 Chromosome ena exon 632372 633034 . + . Parent=transcript:Rv0540;Name=Rv0540-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0540-1;rank=1 Chromosome ena CDS 632372 633034 . + 0 ID=CDS:Rv0540;Parent=transcript:Rv0540;protein_id=Rv0540 ### -Chromosome ena gene 633055 634404 . - . ID=gene:Rv0541c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0541c;logic_name=ena +Chromosome ena gene 633055 634404 . - . ID=gene:Rv0541c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0541c;logic_name=ena Chromosome ena mRNA 633055 634404 . - . ID=transcript:Rv0541c;Parent=gene:Rv0541c;biotype=protein_coding;transcript_id=Rv0541c Chromosome ena exon 633055 634404 . - . Parent=transcript:Rv0541c;Name=Rv0541c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0541c-1;rank=1 Chromosome ena CDS 633055 634404 . - 0 ID=CDS:Rv0541c;Parent=transcript:Rv0541c;protein_id=Rv0541c ### -Chromosome ena gene 634416 635504 . - . ID=gene:Rv0542c;Name=menE;biotype=protein_coding;description=Possible O-succinylbenzoic acid--CoA ligase MenE (OSB-CoA synthetase) (O-succinylbenzoate-CoA synthase);gene_id=Rv0542c;logic_name=ena +Chromosome ena gene 634416 635504 . - . ID=gene:Rv0542c;Name=menE;biotype=protein_coding;description=Possible O-succinylbenzoic acid--CoA ligase MenE (OSB-CoA synthetase) (O-succinylbenzoate-CoA synthase);gene_id=Rv0542c;logic_name=ena Chromosome ena mRNA 634416 635504 . - . ID=transcript:Rv0542c;Parent=gene:Rv0542c;Name=menE-1;biotype=protein_coding;transcript_id=Rv0542c Chromosome ena exon 634416 635504 . - . Parent=transcript:Rv0542c;Name=Rv0542c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0542c-1;rank=1 Chromosome ena CDS 634416 635504 . - 0 ID=CDS:Rv0542c;Parent=transcript:Rv0542c;protein_id=Rv0542c ### -Chromosome ena gene 635573 635875 . - . ID=gene:Rv0543c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0543c;logic_name=ena +Chromosome ena gene 635573 635875 . - . ID=gene:Rv0543c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0543c;logic_name=ena Chromosome ena mRNA 635573 635875 . - . ID=transcript:Rv0543c;Parent=gene:Rv0543c;biotype=protein_coding;transcript_id=Rv0543c Chromosome ena exon 635573 635875 . - . Parent=transcript:Rv0543c;Name=Rv0543c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0543c-1;rank=1 Chromosome ena CDS 635573 635875 . - 0 ID=CDS:Rv0543c;Parent=transcript:Rv0543c;protein_id=Rv0543c ### -Chromosome ena gene 635935 636213 . - . ID=gene:Rv0544c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0544c;logic_name=ena +Chromosome ena gene 635935 636213 . - . ID=gene:Rv0544c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0544c;logic_name=ena Chromosome ena mRNA 635935 636213 . - . ID=transcript:Rv0544c;Parent=gene:Rv0544c;biotype=protein_coding;transcript_id=Rv0544c Chromosome ena exon 635935 636213 . - . Parent=transcript:Rv0544c;Name=Rv0544c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0544c-1;rank=1 Chromosome ena CDS 635935 636213 . - 0 ID=CDS:Rv0544c;Parent=transcript:Rv0544c;protein_id=Rv0544c ### -Chromosome ena gene 636210 637463 . - . ID=gene:Rv0545c;Name=pitA;biotype=protein_coding;description=Probable low-affinity inorganic phosphate transporter integral membrane protein PitA;gene_id=Rv0545c;logic_name=ena +Chromosome ena gene 636210 637463 . - . ID=gene:Rv0545c;Name=pitA;biotype=protein_coding;description=Probable low-affinity inorganic phosphate transporter integral membrane protein PitA;gene_id=Rv0545c;logic_name=ena Chromosome ena mRNA 636210 637463 . - . ID=transcript:Rv0545c;Parent=gene:Rv0545c;Name=pitA-1;biotype=protein_coding;transcript_id=Rv0545c Chromosome ena exon 636210 637463 . - . Parent=transcript:Rv0545c;Name=Rv0545c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0545c-1;rank=1 Chromosome ena CDS 636210 637463 . - 0 ID=CDS:Rv0545c;Parent=transcript:Rv0545c;protein_id=Rv0545c ### -Chromosome ena gene 637583 637969 . - . ID=gene:Rv0546c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0546c;logic_name=ena +Chromosome ena gene 637583 637969 . - . ID=gene:Rv0546c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0546c;logic_name=ena Chromosome ena mRNA 637583 637969 . - . ID=transcript:Rv0546c;Parent=gene:Rv0546c;biotype=protein_coding;transcript_id=Rv0546c Chromosome ena exon 637583 637969 . - . Parent=transcript:Rv0546c;Name=Rv0546c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0546c-1;rank=1 Chromosome ena CDS 637583 637969 . - 0 ID=CDS:Rv0546c;Parent=transcript:Rv0546c;protein_id=Rv0546c ### -Chromosome ena gene 638032 638916 . - . ID=gene:Rv0547c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0547c;logic_name=ena +Chromosome ena gene 638032 638916 . - . ID=gene:Rv0547c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0547c;logic_name=ena Chromosome ena mRNA 638032 638916 . - . ID=transcript:Rv0547c;Parent=gene:Rv0547c;biotype=protein_coding;transcript_id=Rv0547c Chromosome ena exon 638032 638916 . - . Parent=transcript:Rv0547c;Name=Rv0547c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0547c-1;rank=1 Chromosome ena CDS 638032 638916 . - 0 ID=CDS:Rv0547c;Parent=transcript:Rv0547c;protein_id=Rv0547c ### -Chromosome ena gene 639012 639956 . - . ID=gene:Rv0548c;Name=menB;biotype=protein_coding;description=Naphthoate synthase MenB (dihydroxynaphthoic acid synthetase) (DHNA synthetase);gene_id=Rv0548c;logic_name=ena +Chromosome ena gene 639012 639956 . - . ID=gene:Rv0548c;Name=menB;biotype=protein_coding;description=Naphthoate synthase MenB (dihydroxynaphthoic acid synthetase) (DHNA synthetase);gene_id=Rv0548c;logic_name=ena Chromosome ena mRNA 639012 639956 . - . ID=transcript:Rv0548c;Parent=gene:Rv0548c;Name=menB-1;biotype=protein_coding;transcript_id=Rv0548c Chromosome ena exon 639012 639956 . - . Parent=transcript:Rv0548c;Name=Rv0548c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0548c-1;rank=1 Chromosome ena CDS 639012 639956 . - 0 ID=CDS:Rv0548c;Parent=transcript:Rv0548c;protein_id=Rv0548c ### -Chromosome ena gene 640228 640641 . - . ID=gene:Rv0549c;Name=vapC3;biotype=protein_coding;description=Possible toxin VapC3;gene_id=Rv0549c;logic_name=ena +Chromosome ena gene 640228 640641 . - . ID=gene:Rv0549c;Name=vapC3;biotype=protein_coding;description=Possible toxin VapC3;gene_id=Rv0549c;logic_name=ena Chromosome ena mRNA 640228 640641 . - . ID=transcript:Rv0549c;Parent=gene:Rv0549c;Name=vapC3-1;biotype=protein_coding;transcript_id=Rv0549c Chromosome ena exon 640228 640641 . - . Parent=transcript:Rv0549c;Name=Rv0549c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0549c-1;rank=1 Chromosome ena CDS 640228 640641 . - 0 ID=CDS:Rv0549c;Parent=transcript:Rv0549c;protein_id=Rv0549c ### -Chromosome ena gene 640638 640904 . - . ID=gene:Rv0550c;Name=vapB3;biotype=protein_coding;description=Possible antitoxin VapB3;gene_id=Rv0550c;logic_name=ena +Chromosome ena gene 640638 640904 . - . ID=gene:Rv0550c;Name=vapB3;biotype=protein_coding;description=Possible antitoxin VapB3;gene_id=Rv0550c;logic_name=ena Chromosome ena mRNA 640638 640904 . - . ID=transcript:Rv0550c;Parent=gene:Rv0550c;Name=vapB3-1;biotype=protein_coding;transcript_id=Rv0550c Chromosome ena exon 640638 640904 . - . Parent=transcript:Rv0550c;Name=Rv0550c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0550c-1;rank=1 Chromosome ena CDS 640638 640904 . - 0 ID=CDS:Rv0550c;Parent=transcript:Rv0550c;protein_id=Rv0550c ### -Chromosome ena gene 641096 642811 . - . ID=gene:Rv0551c;Name=fadD8;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD8 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0551c;logic_name=ena +Chromosome ena gene 641096 642811 . - . ID=gene:Rv0551c;Name=fadD8;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD8 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0551c;logic_name=ena Chromosome ena mRNA 641096 642811 . - . ID=transcript:Rv0551c;Parent=gene:Rv0551c;Name=fadD8-1;biotype=protein_coding;transcript_id=Rv0551c Chromosome ena exon 641096 642811 . - . Parent=transcript:Rv0551c;Name=Rv0551c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0551c-1;rank=1 Chromosome ena CDS 641096 642811 . - 0 ID=CDS:Rv0551c;Parent=transcript:Rv0551c;protein_id=Rv0551c ### -Chromosome ena gene 642889 644493 . + . ID=gene:Rv0552;biotype=protein_coding;description=Conserved protein;gene_id=Rv0552;logic_name=ena +Chromosome ena gene 642889 644493 . + . ID=gene:Rv0552;biotype=protein_coding;description=Conserved protein;gene_id=Rv0552;logic_name=ena Chromosome ena mRNA 642889 644493 . + . ID=transcript:Rv0552;Parent=gene:Rv0552;biotype=protein_coding;transcript_id=Rv0552 Chromosome ena exon 642889 644493 . + . Parent=transcript:Rv0552;Name=Rv0552-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0552-1;rank=1 Chromosome ena CDS 642889 644493 . + 0 ID=CDS:Rv0552;Parent=transcript:Rv0552;protein_id=Rv0552 ### -Chromosome ena gene 644490 645470 . + . ID=gene:Rv0553;Name=menC;biotype=protein_coding;description=Probable muconate cycloisomerase MenC (cis%2Ccis-muconate lactonizing enzyme) (MLE);gene_id=Rv0553;logic_name=ena +Chromosome ena gene 644490 645470 . + . ID=gene:Rv0553;Name=menC;biotype=protein_coding;description=Probable muconate cycloisomerase MenC (cis%2Ccis-muconate lactonizing enzyme) (MLE);gene_id=Rv0553;logic_name=ena Chromosome ena mRNA 644490 645470 . + . ID=transcript:Rv0553;Parent=gene:Rv0553;Name=menC-1;biotype=protein_coding;transcript_id=Rv0553 Chromosome ena exon 644490 645470 . + . Parent=transcript:Rv0553;Name=Rv0553-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0553-1;rank=1 Chromosome ena CDS 644490 645470 . + 0 ID=CDS:Rv0553;Parent=transcript:Rv0553;protein_id=Rv0553 ### -Chromosome ena gene 645467 646255 . + . ID=gene:Rv0554;Name=bpoC;biotype=protein_coding;description=Possible peroxidase BpoC (non-haem peroxidase);gene_id=Rv0554;logic_name=ena +Chromosome ena gene 645467 646255 . + . ID=gene:Rv0554;Name=bpoC;biotype=protein_coding;description=Possible peroxidase BpoC (non-haem peroxidase);gene_id=Rv0554;logic_name=ena Chromosome ena mRNA 645467 646255 . + . ID=transcript:Rv0554;Parent=gene:Rv0554;Name=bpoC-1;biotype=protein_coding;transcript_id=Rv0554 Chromosome ena exon 645467 646255 . + . Parent=transcript:Rv0554;Name=Rv0554-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0554-1;rank=1 Chromosome ena CDS 645467 646255 . + 0 ID=CDS:Rv0554;Parent=transcript:Rv0554;protein_id=Rv0554 ### -Chromosome ena gene 646298 647962 . + . ID=gene:Rv0555;Name=menD;biotype=protein_coding;description=Probable bifunctional menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (KDC);gene_id=Rv0555;logic_name=ena +Chromosome ena gene 646298 647962 . + . ID=gene:Rv0555;Name=menD;biotype=protein_coding;description=Probable bifunctional menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase (SHCHC synthase) + 2-oxoglutarate decarboxylase (alpha-ketoglutarate decarboxylase) (KDC);gene_id=Rv0555;logic_name=ena Chromosome ena mRNA 646298 647962 . + . ID=transcript:Rv0555;Parent=gene:Rv0555;Name=menD-1;biotype=protein_coding;transcript_id=Rv0555 Chromosome ena exon 646298 647962 . + . Parent=transcript:Rv0555;Name=Rv0555-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0555-1;rank=1 Chromosome ena CDS 646298 647962 . + 0 ID=CDS:Rv0555;Parent=transcript:Rv0555;protein_id=Rv0555 ### -Chromosome ena gene 647959 648474 . + . ID=gene:Rv0556;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0556;logic_name=ena +Chromosome ena gene 647959 648474 . + . ID=gene:Rv0556;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0556;logic_name=ena Chromosome ena mRNA 647959 648474 . + . ID=transcript:Rv0556;Parent=gene:Rv0556;biotype=protein_coding;transcript_id=Rv0556 Chromosome ena exon 647959 648474 . + . Parent=transcript:Rv0556;Name=Rv0556-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0556-1;rank=1 Chromosome ena CDS 647959 648474 . + 0 ID=CDS:Rv0556;Parent=transcript:Rv0556;protein_id=Rv0556 ### -Chromosome ena gene 648536 649672 . + . ID=gene:Rv0557;Name=mgtA;biotype=protein_coding;description=Mannosyltransferase MgtA;gene_id=Rv0557;logic_name=ena +Chromosome ena gene 648536 649672 . + . ID=gene:Rv0557;Name=mgtA;biotype=protein_coding;description=Mannosyltransferase MgtA;gene_id=Rv0557;logic_name=ena Chromosome ena mRNA 648536 649672 . + . ID=transcript:Rv0557;Parent=gene:Rv0557;Name=mgtA-1;biotype=protein_coding;transcript_id=Rv0557 Chromosome ena exon 648536 649672 . + . Parent=transcript:Rv0557;Name=Rv0557-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0557-1;rank=1 Chromosome ena CDS 648536 649672 . + 0 ID=CDS:Rv0557;Parent=transcript:Rv0557;protein_id=Rv0557 ### -Chromosome ena gene 649689 650393 . + . ID=gene:Rv0558;Name=menH;biotype=protein_coding;description=Probable ubiquinone/menaquinone biosynthesis methyltransferase MenH (2-heptaprenyl-1%2C4-naphthoquinone methyltransferase);gene_id=Rv0558;logic_name=ena +Chromosome ena gene 649689 650393 . + . ID=gene:Rv0558;Name=menH;biotype=protein_coding;description=Probable ubiquinone/menaquinone biosynthesis methyltransferase MenH (2-heptaprenyl-1%2C4-naphthoquinone methyltransferase);gene_id=Rv0558;logic_name=ena Chromosome ena mRNA 649689 650393 . + . ID=transcript:Rv0558;Parent=gene:Rv0558;Name=menH-1;biotype=protein_coding;transcript_id=Rv0558 Chromosome ena exon 649689 650393 . + . Parent=transcript:Rv0558;Name=Rv0558-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0558-1;rank=1 Chromosome ena CDS 649689 650393 . + 0 ID=CDS:Rv0558;Parent=transcript:Rv0558;protein_id=Rv0558 ### -Chromosome ena gene 650407 650745 . - . ID=gene:Rv0559c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0559c;logic_name=ena +Chromosome ena gene 650407 650745 . - . ID=gene:Rv0559c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv0559c;logic_name=ena Chromosome ena mRNA 650407 650745 . - . ID=transcript:Rv0559c;Parent=gene:Rv0559c;biotype=protein_coding;transcript_id=Rv0559c Chromosome ena exon 650407 650745 . - . Parent=transcript:Rv0559c;Name=Rv0559c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0559c-1;rank=1 Chromosome ena CDS 650407 650745 . - 0 ID=CDS:Rv0559c;Parent=transcript:Rv0559c;protein_id=Rv0559c ### -Chromosome ena gene 650779 651504 . - . ID=gene:Rv0560c;biotype=protein_coding;description=Possible benzoquinone methyltransferase (methylase);gene_id=Rv0560c;logic_name=ena +Chromosome ena gene 650779 651504 . - . ID=gene:Rv0560c;biotype=protein_coding;description=Possible benzoquinone methyltransferase (methylase);gene_id=Rv0560c;logic_name=ena Chromosome ena mRNA 650779 651504 . - . ID=transcript:Rv0560c;Parent=gene:Rv0560c;biotype=protein_coding;transcript_id=Rv0560c Chromosome ena exon 650779 651504 . - . Parent=transcript:Rv0560c;Name=Rv0560c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0560c-1;rank=1 Chromosome ena CDS 650779 651504 . - 0 ID=CDS:Rv0560c;Parent=transcript:Rv0560c;protein_id=Rv0560c ### -Chromosome ena gene 651529 652755 . - . ID=gene:Rv0561c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0561c;logic_name=ena +Chromosome ena gene 651529 652755 . - . ID=gene:Rv0561c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0561c;logic_name=ena Chromosome ena mRNA 651529 652755 . - . ID=transcript:Rv0561c;Parent=gene:Rv0561c;biotype=protein_coding;transcript_id=Rv0561c Chromosome ena exon 651529 652755 . - . Parent=transcript:Rv0561c;Name=Rv0561c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0561c-1;rank=1 Chromosome ena CDS 651529 652755 . - 0 ID=CDS:Rv0561c;Parent=transcript:Rv0561c;protein_id=Rv0561c ### -Chromosome ena gene 652771 653778 . + . ID=gene:Rv0562;Name=grcC1;biotype=protein_coding;description=Probable polyprenyl-diphosphate synthase GrcC1 (polyprenyl pyrophosphate synthetase);gene_id=Rv0562;logic_name=ena +Chromosome ena gene 652771 653778 . + . ID=gene:Rv0562;Name=grcC1;biotype=protein_coding;description=Probable polyprenyl-diphosphate synthase GrcC1 (polyprenyl pyrophosphate synthetase);gene_id=Rv0562;logic_name=ena Chromosome ena mRNA 652771 653778 . + . ID=transcript:Rv0562;Parent=gene:Rv0562;Name=grcC1-1;biotype=protein_coding;transcript_id=Rv0562 Chromosome ena exon 652771 653778 . + . Parent=transcript:Rv0562;Name=Rv0562-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0562-1;rank=1 Chromosome ena CDS 652771 653778 . + 0 ID=CDS:Rv0562;Parent=transcript:Rv0562;protein_id=Rv0562 ### -Chromosome ena gene 653879 654739 . + . ID=gene:Rv0563;Name=htpX;biotype=protein_coding;description=Probable protease transmembrane protein heat shock protein HtpX;gene_id=Rv0563;logic_name=ena +Chromosome ena gene 653879 654739 . + . ID=gene:Rv0563;Name=htpX;biotype=protein_coding;description=Probable protease transmembrane protein heat shock protein HtpX;gene_id=Rv0563;logic_name=ena Chromosome ena mRNA 653879 654739 . + . ID=transcript:Rv0563;Parent=gene:Rv0563;Name=htpX-1;biotype=protein_coding;transcript_id=Rv0563 Chromosome ena exon 653879 654739 . + . Parent=transcript:Rv0563;Name=Rv0563-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0563-1;rank=1 Chromosome ena CDS 653879 654739 . + 0 ID=CDS:Rv0563;Parent=transcript:Rv0563;protein_id=Rv0563 ### -Chromosome ena gene 654924 655949 . - . ID=gene:Rv0564c;Name=gpdA1;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase);gene_id=Rv0564c;logic_name=ena +Chromosome ena gene 654924 655949 . - . ID=gene:Rv0564c;Name=gpdA1;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase);gene_id=Rv0564c;logic_name=ena Chromosome ena mRNA 654924 655949 . - . ID=transcript:Rv0564c;Parent=gene:Rv0564c;Name=gpdA1-1;biotype=protein_coding;transcript_id=Rv0564c Chromosome ena exon 654924 655949 . - . Parent=transcript:Rv0564c;Name=Rv0564c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0564c-1;rank=1 Chromosome ena CDS 654924 655949 . - 0 ID=CDS:Rv0564c;Parent=transcript:Rv0564c;protein_id=Rv0564c ### -Chromosome ena gene 656010 657470 . - . ID=gene:Rv0565c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0565c;logic_name=ena +Chromosome ena gene 656010 657470 . - . ID=gene:Rv0565c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0565c;logic_name=ena Chromosome ena mRNA 656010 657470 . - . ID=transcript:Rv0565c;Parent=gene:Rv0565c;biotype=protein_coding;transcript_id=Rv0565c Chromosome ena exon 656010 657470 . - . Parent=transcript:Rv0565c;Name=Rv0565c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0565c-1;rank=1 Chromosome ena CDS 656010 657470 . - 0 ID=CDS:Rv0565c;Parent=transcript:Rv0565c;protein_id=Rv0565c ### -Chromosome ena gene 657548 658039 . - . ID=gene:Rv0566c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0566c;logic_name=ena +Chromosome ena gene 657548 658039 . - . ID=gene:Rv0566c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0566c;logic_name=ena Chromosome ena mRNA 657548 658039 . - . ID=transcript:Rv0566c;Parent=gene:Rv0566c;biotype=protein_coding;transcript_id=Rv0566c Chromosome ena exon 657548 658039 . - . Parent=transcript:Rv0566c;Name=Rv0566c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0566c-1;rank=1 Chromosome ena CDS 657548 658039 . - 0 ID=CDS:Rv0566c;Parent=transcript:Rv0566c;protein_id=Rv0566c @@ -2951,228 +2951,228 @@ Chromosome ena transcript 658109 658189 . + . ID=transcript:EBG00000313386;Paren Chromosome ena exon 658109 658189 . + . Parent=transcript:EBG00000313386;Name=EBG00000313386;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313386;rank=1 ### Chromosome ena_gene biological_region 658109 658189 . + . external_name=AL123456.3:gene:658109..658189;logic_name=ena_gene -Chromosome ena gene 658321 659340 . + . ID=gene:Rv0567;biotype=protein_coding;description=Probable methyltransferase/methylase;gene_id=Rv0567;logic_name=ena +Chromosome ena gene 658321 659340 . + . ID=gene:Rv0567;biotype=protein_coding;description=Probable methyltransferase/methylase;gene_id=Rv0567;logic_name=ena Chromosome ena mRNA 658321 659340 . + . ID=transcript:Rv0567;Parent=gene:Rv0567;biotype=protein_coding;transcript_id=Rv0567 Chromosome ena exon 658321 659340 . + . Parent=transcript:Rv0567;Name=Rv0567-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0567-1;rank=1 Chromosome ena CDS 658321 659340 . + 0 ID=CDS:Rv0567;Parent=transcript:Rv0567;protein_id=Rv0567 ### -Chromosome ena gene 659450 660868 . + . ID=gene:Rv0568;Name=cyp135B1;biotype=protein_coding;description=Possible cytochrome P450 135B1 Cyp135B1;gene_id=Rv0568;logic_name=ena +Chromosome ena gene 659450 660868 . + . ID=gene:Rv0568;Name=cyp135B1;biotype=protein_coding;description=Possible cytochrome P450 135B1 Cyp135B1;gene_id=Rv0568;logic_name=ena Chromosome ena mRNA 659450 660868 . + . ID=transcript:Rv0568;Parent=gene:Rv0568;Name=cyp135B1-1;biotype=protein_coding;transcript_id=Rv0568 Chromosome ena exon 659450 660868 . + . Parent=transcript:Rv0568;Name=Rv0568-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0568-1;rank=1 Chromosome ena CDS 659450 660868 . + 0 ID=CDS:Rv0568;Parent=transcript:Rv0568;protein_id=Rv0568 ### -Chromosome ena gene 661003 661269 . + . ID=gene:Rv0569;biotype=protein_coding;description=Conserved protein;gene_id=Rv0569;logic_name=ena +Chromosome ena gene 661003 661269 . + . ID=gene:Rv0569;biotype=protein_coding;description=Conserved protein;gene_id=Rv0569;logic_name=ena Chromosome ena mRNA 661003 661269 . + . ID=transcript:Rv0569;Parent=gene:Rv0569;biotype=protein_coding;transcript_id=Rv0569 Chromosome ena exon 661003 661269 . + . Parent=transcript:Rv0569;Name=Rv0569-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0569-1;rank=1 Chromosome ena CDS 661003 661269 . + 0 ID=CDS:Rv0569;Parent=transcript:Rv0569;protein_id=Rv0569 ### -Chromosome ena gene 661295 663373 . + . ID=gene:Rv0570;Name=nrdZ;biotype=protein_coding;description=Probable ribonucleoside-diphosphate reductase (large subunit) NrdZ (ribonucleotide reductase);gene_id=Rv0570;logic_name=ena +Chromosome ena gene 661295 663373 . + . ID=gene:Rv0570;Name=nrdZ;biotype=protein_coding;description=Probable ribonucleoside-diphosphate reductase (large subunit) NrdZ (ribonucleotide reductase);gene_id=Rv0570;logic_name=ena Chromosome ena mRNA 661295 663373 . + . ID=transcript:Rv0570;Parent=gene:Rv0570;Name=nrdZ-1;biotype=protein_coding;transcript_id=Rv0570 Chromosome ena exon 661295 663373 . + . Parent=transcript:Rv0570;Name=Rv0570-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0570-1;rank=1 Chromosome ena CDS 661295 663373 . + 0 ID=CDS:Rv0570;Parent=transcript:Rv0570;protein_id=Rv0570 ### -Chromosome ena gene 663487 664818 . - . ID=gene:Rv0571c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0571c;logic_name=ena +Chromosome ena gene 663487 664818 . - . ID=gene:Rv0571c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0571c;logic_name=ena Chromosome ena mRNA 663487 664818 . - . ID=transcript:Rv0571c;Parent=gene:Rv0571c;biotype=protein_coding;transcript_id=Rv0571c Chromosome ena exon 663487 664818 . - . Parent=transcript:Rv0571c;Name=Rv0571c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0571c-1;rank=1 Chromosome ena CDS 663487 664818 . - 0 ID=CDS:Rv0571c;Parent=transcript:Rv0571c;protein_id=Rv0571c ### -Chromosome ena gene 665042 665383 . - . ID=gene:Rv0572c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0572c;logic_name=ena +Chromosome ena gene 665042 665383 . - . ID=gene:Rv0572c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0572c;logic_name=ena Chromosome ena mRNA 665042 665383 . - . ID=transcript:Rv0572c;Parent=gene:Rv0572c;biotype=protein_coding;transcript_id=Rv0572c Chromosome ena exon 665042 665383 . - . Parent=transcript:Rv0572c;Name=Rv0572c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0572c-1;rank=1 Chromosome ena CDS 665042 665383 . - 0 ID=CDS:Rv0572c;Parent=transcript:Rv0572c;protein_id=Rv0572c ### -Chromosome ena gene 665851 667242 . - . ID=gene:Rv0573c;Name=pncB2;biotype=protein_coding;description=Nicotinic acid phosphoribosyltransferase PncB2;gene_id=Rv0573c;logic_name=ena +Chromosome ena gene 665851 667242 . - . ID=gene:Rv0573c;Name=pncB2;biotype=protein_coding;description=Nicotinic acid phosphoribosyltransferase PncB2;gene_id=Rv0573c;logic_name=ena Chromosome ena mRNA 665851 667242 . - . ID=transcript:Rv0573c;Parent=gene:Rv0573c;Name=pncB2-1;biotype=protein_coding;transcript_id=Rv0573c Chromosome ena exon 665851 667242 . - . Parent=transcript:Rv0573c;Name=Rv0573c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0573c-1;rank=1 Chromosome ena CDS 665851 667242 . - 0 ID=CDS:Rv0573c;Parent=transcript:Rv0573c;protein_id=Rv0573c ### -Chromosome ena gene 667252 668394 . - . ID=gene:Rv0574c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0574c;logic_name=ena +Chromosome ena gene 667252 668394 . - . ID=gene:Rv0574c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0574c;logic_name=ena Chromosome ena mRNA 667252 668394 . - . ID=transcript:Rv0574c;Parent=gene:Rv0574c;biotype=protein_coding;transcript_id=Rv0574c Chromosome ena exon 667252 668394 . - . Parent=transcript:Rv0574c;Name=Rv0574c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0574c-1;rank=1 Chromosome ena CDS 667252 668394 . - 0 ID=CDS:Rv0574c;Parent=transcript:Rv0574c;protein_id=Rv0574c ### -Chromosome ena gene 668579 669745 . - . ID=gene:Rv0575c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0575c;logic_name=ena +Chromosome ena gene 668579 669745 . - . ID=gene:Rv0575c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0575c;logic_name=ena Chromosome ena mRNA 668579 669745 . - . ID=transcript:Rv0575c;Parent=gene:Rv0575c;biotype=protein_coding;transcript_id=Rv0575c Chromosome ena exon 668579 669745 . - . Parent=transcript:Rv0575c;Name=Rv0575c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0575c-1;rank=1 Chromosome ena CDS 668579 669745 . - 0 ID=CDS:Rv0575c;Parent=transcript:Rv0575c;protein_id=Rv0575c ### -Chromosome ena gene 669848 671152 . + . ID=gene:Rv0576;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly ArsR-family);gene_id=Rv0576;logic_name=ena +Chromosome ena gene 669848 671152 . + . ID=gene:Rv0576;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly ArsR-family);gene_id=Rv0576;logic_name=ena Chromosome ena mRNA 669848 671152 . + . ID=transcript:Rv0576;Parent=gene:Rv0576;biotype=protein_coding;transcript_id=Rv0576 Chromosome ena exon 669848 671152 . + . Parent=transcript:Rv0576;Name=Rv0576-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0576-1;rank=1 Chromosome ena CDS 669848 671152 . + 0 ID=CDS:Rv0576;Parent=transcript:Rv0576;protein_id=Rv0576 ### -Chromosome ena gene 671166 671951 . + . ID=gene:Rv0577;Name=TB27.3;biotype=protein_coding;description=Conserved protein TB27.3;gene_id=Rv0577;logic_name=ena +Chromosome ena gene 671166 671951 . + . ID=gene:Rv0577;Name=TB27.3;biotype=protein_coding;description=Conserved protein TB27.3;gene_id=Rv0577;logic_name=ena Chromosome ena mRNA 671166 671951 . + . ID=transcript:Rv0577;Parent=gene:Rv0577;Name=TB27.3-1;biotype=protein_coding;transcript_id=Rv0577 Chromosome ena exon 671166 671951 . + . Parent=transcript:Rv0577;Name=Rv0577-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0577-1;rank=1 Chromosome ena CDS 671166 671951 . + 0 ID=CDS:Rv0577;Parent=transcript:Rv0577;protein_id=Rv0577 ### -Chromosome ena gene 671996 675916 . - . ID=gene:Rv0578c;Name=PE_PGRS7;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS7;gene_id=Rv0578c;logic_name=ena +Chromosome ena gene 671996 675916 . - . ID=gene:Rv0578c;Name=PE_PGRS7;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS7;gene_id=Rv0578c;logic_name=ena Chromosome ena mRNA 671996 675916 . - . ID=transcript:Rv0578c;Parent=gene:Rv0578c;Name=PE_PGRS7-1;biotype=protein_coding;transcript_id=Rv0578c Chromosome ena exon 671996 675916 . - . Parent=transcript:Rv0578c;Name=Rv0578c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0578c-1;rank=1 Chromosome ena CDS 671996 675916 . - 0 ID=CDS:Rv0578c;Parent=transcript:Rv0578c;protein_id=Rv0578c ### -Chromosome ena gene 676238 676996 . + . ID=gene:Rv0579;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0579;logic_name=ena +Chromosome ena gene 676238 676996 . + . ID=gene:Rv0579;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0579;logic_name=ena Chromosome ena mRNA 676238 676996 . + . ID=transcript:Rv0579;Parent=gene:Rv0579;biotype=protein_coding;transcript_id=Rv0579 Chromosome ena exon 676238 676996 . + . Parent=transcript:Rv0579;Name=Rv0579-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0579-1;rank=1 Chromosome ena CDS 676238 676996 . + 0 ID=CDS:Rv0579;Parent=transcript:Rv0579;protein_id=Rv0579 ### -Chromosome ena gene 677125 677616 . - . ID=gene:Rv0580c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0580c;logic_name=ena +Chromosome ena gene 677125 677616 . - . ID=gene:Rv0580c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0580c;logic_name=ena Chromosome ena mRNA 677125 677616 . - . ID=transcript:Rv0580c;Parent=gene:Rv0580c;biotype=protein_coding;transcript_id=Rv0580c Chromosome ena exon 677125 677616 . - . Parent=transcript:Rv0580c;Name=Rv0580c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0580c-1;rank=1 Chromosome ena CDS 677125 677616 . - 0 ID=CDS:Rv0580c;Parent=transcript:Rv0580c;protein_id=Rv0580c ### -Chromosome ena gene 677710 677925 . + . ID=gene:Rv0581;Name=vapB26;biotype=protein_coding;description=Possible antitoxin VapB26;gene_id=Rv0581;logic_name=ena +Chromosome ena gene 677710 677925 . + . ID=gene:Rv0581;Name=vapB26;biotype=protein_coding;description=Possible antitoxin VapB26;gene_id=Rv0581;logic_name=ena Chromosome ena mRNA 677710 677925 . + . ID=transcript:Rv0581;Parent=gene:Rv0581;Name=vapB26-1;biotype=protein_coding;transcript_id=Rv0581 Chromosome ena exon 677710 677925 . + . Parent=transcript:Rv0581;Name=Rv0581-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0581-1;rank=1 Chromosome ena CDS 677710 677925 . + 0 ID=CDS:Rv0581;Parent=transcript:Rv0581;protein_id=Rv0581 ### -Chromosome ena gene 677922 678329 . + . ID=gene:Rv0582;Name=vapC26;biotype=protein_coding;description=Possible toxin VapC26. Contains PIN domain.;gene_id=Rv0582;logic_name=ena +Chromosome ena gene 677922 678329 . + . ID=gene:Rv0582;Name=vapC26;biotype=protein_coding;description=Possible toxin VapC26. Contains PIN domain.;gene_id=Rv0582;logic_name=ena Chromosome ena mRNA 677922 678329 . + . ID=transcript:Rv0582;Parent=gene:Rv0582;Name=vapC26-1;biotype=protein_coding;transcript_id=Rv0582 Chromosome ena exon 677922 678329 . + . Parent=transcript:Rv0582;Name=Rv0582-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0582-1;rank=1 Chromosome ena CDS 677922 678329 . + 0 ID=CDS:Rv0582;Parent=transcript:Rv0582;protein_id=Rv0582 ### -Chromosome ena gene 678389 679075 . - . ID=gene:Rv0583c;Name=lpqN;biotype=protein_coding;description=Probable conserved lipoprotein LpqN;gene_id=Rv0583c;logic_name=ena +Chromosome ena gene 678389 679075 . - . ID=gene:Rv0583c;Name=lpqN;biotype=protein_coding;description=Probable conserved lipoprotein LpqN;gene_id=Rv0583c;logic_name=ena Chromosome ena mRNA 678389 679075 . - . ID=transcript:Rv0583c;Parent=gene:Rv0583c;Name=lpqN-1;biotype=protein_coding;transcript_id=Rv0583c Chromosome ena exon 678389 679075 . - . Parent=transcript:Rv0583c;Name=Rv0583c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0583c-1;rank=1 Chromosome ena CDS 678389 679075 . - 0 ID=CDS:Rv0583c;Parent=transcript:Rv0583c;protein_id=Rv0583c ### -Chromosome ena gene 679229 681862 . + . ID=gene:Rv0584;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0584;logic_name=ena +Chromosome ena gene 679229 681862 . + . ID=gene:Rv0584;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0584;logic_name=ena Chromosome ena mRNA 679229 681862 . + . ID=transcript:Rv0584;Parent=gene:Rv0584;biotype=protein_coding;transcript_id=Rv0584 Chromosome ena exon 679229 681862 . + . Parent=transcript:Rv0584;Name=Rv0584-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0584-1;rank=1 Chromosome ena CDS 679229 681862 . + 0 ID=CDS:Rv0584;Parent=transcript:Rv0584;protein_id=Rv0584 ### -Chromosome ena gene 681885 684272 . - . ID=gene:Rv0585c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0585c;logic_name=ena +Chromosome ena gene 681885 684272 . - . ID=gene:Rv0585c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0585c;logic_name=ena Chromosome ena mRNA 681885 684272 . - . ID=transcript:Rv0585c;Parent=gene:Rv0585c;biotype=protein_coding;transcript_id=Rv0585c Chromosome ena exon 681885 684272 . - . Parent=transcript:Rv0585c;Name=Rv0585c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0585c-1;rank=1 Chromosome ena CDS 681885 684272 . - 0 ID=CDS:Rv0585c;Parent=transcript:Rv0585c;protein_id=Rv0585c ### -Chromosome ena gene 684410 685132 . + . ID=gene:Rv0586;Name=mce2R;biotype=protein_coding;description=Probable transcriptional regulatory protein Mce2R (GntR-family);gene_id=Rv0586;logic_name=ena +Chromosome ena gene 684410 685132 . + . ID=gene:Rv0586;Name=mce2R;biotype=protein_coding;description=Probable transcriptional regulatory protein Mce2R (GntR-family);gene_id=Rv0586;logic_name=ena Chromosome ena mRNA 684410 685132 . + . ID=transcript:Rv0586;Parent=gene:Rv0586;Name=mce2R-1;biotype=protein_coding;transcript_id=Rv0586 Chromosome ena exon 684410 685132 . + . Parent=transcript:Rv0586;Name=Rv0586-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0586-1;rank=1 Chromosome ena CDS 684410 685132 . + 0 ID=CDS:Rv0586;Parent=transcript:Rv0586;protein_id=Rv0586 ### -Chromosome ena gene 685129 685926 . + . ID=gene:Rv0587;Name=yrbE2A;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE2A;gene_id=Rv0587;logic_name=ena +Chromosome ena gene 685129 685926 . + . ID=gene:Rv0587;Name=yrbE2A;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE2A;gene_id=Rv0587;logic_name=ena Chromosome ena mRNA 685129 685926 . + . ID=transcript:Rv0587;Parent=gene:Rv0587;Name=yrbE2A-1;biotype=protein_coding;transcript_id=Rv0587 Chromosome ena exon 685129 685926 . + . Parent=transcript:Rv0587;Name=Rv0587-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0587-1;rank=1 Chromosome ena CDS 685129 685926 . + 0 ID=CDS:Rv0587;Parent=transcript:Rv0587;protein_id=Rv0587 ### -Chromosome ena gene 685928 686815 . + . ID=gene:Rv0588;Name=yrbE2B;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE2B;gene_id=Rv0588;logic_name=ena +Chromosome ena gene 685928 686815 . + . ID=gene:Rv0588;Name=yrbE2B;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE2B;gene_id=Rv0588;logic_name=ena Chromosome ena mRNA 685928 686815 . + . ID=transcript:Rv0588;Parent=gene:Rv0588;Name=yrbE2B-1;biotype=protein_coding;transcript_id=Rv0588 Chromosome ena exon 685928 686815 . + . Parent=transcript:Rv0588;Name=Rv0588-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0588-1;rank=1 Chromosome ena CDS 685928 686815 . + 0 ID=CDS:Rv0588;Parent=transcript:Rv0588;protein_id=Rv0588 ### -Chromosome ena gene 686821 688035 . + . ID=gene:Rv0589;Name=mce2A;biotype=protein_coding;description=Mce-family protein Mce2A;gene_id=Rv0589;logic_name=ena +Chromosome ena gene 686821 688035 . + . ID=gene:Rv0589;Name=mce2A;biotype=protein_coding;description=Mce-family protein Mce2A;gene_id=Rv0589;logic_name=ena Chromosome ena mRNA 686821 688035 . + . ID=transcript:Rv0589;Parent=gene:Rv0589;Name=mce2A-1;biotype=protein_coding;transcript_id=Rv0589 Chromosome ena exon 686821 688035 . + . Parent=transcript:Rv0589;Name=Rv0589-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0589-1;rank=1 Chromosome ena CDS 686821 688035 . + 0 ID=CDS:Rv0589;Parent=transcript:Rv0589;protein_id=Rv0589 ### -Chromosome ena gene 688032 688859 . + . ID=gene:Rv0590;Name=mce2B;biotype=protein_coding;description=Mce-family protein Mce2B;gene_id=Rv0590;logic_name=ena +Chromosome ena gene 688032 688859 . + . ID=gene:Rv0590;Name=mce2B;biotype=protein_coding;description=Mce-family protein Mce2B;gene_id=Rv0590;logic_name=ena Chromosome ena mRNA 688032 688859 . + . ID=transcript:Rv0590;Parent=gene:Rv0590;Name=mce2B-1;biotype=protein_coding;transcript_id=Rv0590 Chromosome ena exon 688032 688859 . + . Parent=transcript:Rv0590;Name=Rv0590-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0590-1;rank=1 Chromosome ena CDS 688032 688859 . + 0 ID=CDS:Rv0590;Parent=transcript:Rv0590;protein_id=Rv0590 ### -Chromosome ena gene 688808 689062 . + . ID=gene:Rv0590A;biotype=protein_coding;description=Mce-family related protein;gene_id=Rv0590A;logic_name=ena +Chromosome ena gene 688808 689062 . + . ID=gene:Rv0590A;biotype=protein_coding;description=Mce-family related protein;gene_id=Rv0590A;logic_name=ena Chromosome ena mRNA 688808 689062 . + . ID=transcript:Rv0590A;Parent=gene:Rv0590A;biotype=protein_coding;transcript_id=Rv0590A Chromosome ena exon 688808 689062 . + . Parent=transcript:Rv0590A;Name=Rv0590A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0590A-1;rank=1 Chromosome ena CDS 688808 689062 . + 0 ID=CDS:Rv0590A;Parent=transcript:Rv0590A;protein_id=Rv0590A ### -Chromosome ena gene 689059 690504 . + . ID=gene:Rv0591;Name=mce2C;biotype=protein_coding;description=Mce-family protein Mce2C;gene_id=Rv0591;logic_name=ena +Chromosome ena gene 689059 690504 . + . ID=gene:Rv0591;Name=mce2C;biotype=protein_coding;description=Mce-family protein Mce2C;gene_id=Rv0591;logic_name=ena Chromosome ena mRNA 689059 690504 . + . ID=transcript:Rv0591;Parent=gene:Rv0591;Name=mce2C-1;biotype=protein_coding;transcript_id=Rv0591 Chromosome ena exon 689059 690504 . + . Parent=transcript:Rv0591;Name=Rv0591-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0591-1;rank=1 Chromosome ena CDS 689059 690504 . + 0 ID=CDS:Rv0591;Parent=transcript:Rv0591;protein_id=Rv0591 ### -Chromosome ena gene 690501 692027 . + . ID=gene:Rv0592;Name=mce2D;biotype=protein_coding;description=Mce-family protein Mce2D;gene_id=Rv0592;logic_name=ena +Chromosome ena gene 690501 692027 . + . ID=gene:Rv0592;Name=mce2D;biotype=protein_coding;description=Mce-family protein Mce2D;gene_id=Rv0592;logic_name=ena Chromosome ena mRNA 690501 692027 . + . ID=transcript:Rv0592;Parent=gene:Rv0592;Name=mce2D-1;biotype=protein_coding;transcript_id=Rv0592 Chromosome ena exon 690501 692027 . + . Parent=transcript:Rv0592;Name=Rv0592-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0592-1;rank=1 Chromosome ena CDS 690501 692027 . + 0 ID=CDS:Rv0592;Parent=transcript:Rv0592;protein_id=Rv0592 ### -Chromosome ena gene 692024 693232 . + . ID=gene:Rv0593;Name=lprL;biotype=protein_coding;description=Possible Mce-family lipoprotein LprL (Mce-family lipoprotein Mce2E);gene_id=Rv0593;logic_name=ena +Chromosome ena gene 692024 693232 . + . ID=gene:Rv0593;Name=lprL;biotype=protein_coding;description=Possible Mce-family lipoprotein LprL (Mce-family lipoprotein Mce2E);gene_id=Rv0593;logic_name=ena Chromosome ena mRNA 692024 693232 . + . ID=transcript:Rv0593;Parent=gene:Rv0593;Name=lprL-1;biotype=protein_coding;transcript_id=Rv0593 Chromosome ena exon 692024 693232 . + . Parent=transcript:Rv0593;Name=Rv0593-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0593-1;rank=1 Chromosome ena CDS 692024 693232 . + 0 ID=CDS:Rv0593;Parent=transcript:Rv0593;protein_id=Rv0593 ### -Chromosome ena gene 693237 694787 . + . ID=gene:Rv0594;Name=mce2F;biotype=protein_coding;description=Mce-family protein Mce2F;gene_id=Rv0594;logic_name=ena +Chromosome ena gene 693237 694787 . + . ID=gene:Rv0594;Name=mce2F;biotype=protein_coding;description=Mce-family protein Mce2F;gene_id=Rv0594;logic_name=ena Chromosome ena mRNA 693237 694787 . + . ID=transcript:Rv0594;Parent=gene:Rv0594;Name=mce2F-1;biotype=protein_coding;transcript_id=Rv0594 Chromosome ena exon 693237 694787 . + . Parent=transcript:Rv0594;Name=Rv0594-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0594-1;rank=1 Chromosome ena CDS 693237 694787 . + 0 ID=CDS:Rv0594;Parent=transcript:Rv0594;protein_id=Rv0594 ### -Chromosome ena gene 694839 695231 . - . ID=gene:Rv0595c;Name=vapC4;biotype=protein_coding;description=Possible toxin VapC4;gene_id=Rv0595c;logic_name=ena +Chromosome ena gene 694839 695231 . - . ID=gene:Rv0595c;Name=vapC4;biotype=protein_coding;description=Possible toxin VapC4;gene_id=Rv0595c;logic_name=ena Chromosome ena mRNA 694839 695231 . - . ID=transcript:Rv0595c;Parent=gene:Rv0595c;Name=vapC4-1;biotype=protein_coding;transcript_id=Rv0595c Chromosome ena exon 694839 695231 . - . Parent=transcript:Rv0595c;Name=Rv0595c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0595c-1;rank=1 Chromosome ena CDS 694839 695231 . - 0 ID=CDS:Rv0595c;Parent=transcript:Rv0595c;protein_id=Rv0595c ### -Chromosome ena gene 695228 695485 . - . ID=gene:Rv0596c;Name=vapB4;biotype=protein_coding;description=Possible antitoxin VapB4;gene_id=Rv0596c;logic_name=ena +Chromosome ena gene 695228 695485 . - . ID=gene:Rv0596c;Name=vapB4;biotype=protein_coding;description=Possible antitoxin VapB4;gene_id=Rv0596c;logic_name=ena Chromosome ena mRNA 695228 695485 . - . ID=transcript:Rv0596c;Parent=gene:Rv0596c;Name=vapB4-1;biotype=protein_coding;transcript_id=Rv0596c Chromosome ena exon 695228 695485 . - . Parent=transcript:Rv0596c;Name=Rv0596c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0596c-1;rank=1 Chromosome ena CDS 695228 695485 . - 0 ID=CDS:Rv0596c;Parent=transcript:Rv0596c;protein_id=Rv0596c ### -Chromosome ena gene 695668 696903 . - . ID=gene:Rv0597c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0597c;logic_name=ena +Chromosome ena gene 695668 696903 . - . ID=gene:Rv0597c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0597c;logic_name=ena Chromosome ena mRNA 695668 696903 . - . ID=transcript:Rv0597c;Parent=gene:Rv0597c;biotype=protein_coding;transcript_id=Rv0597c Chromosome ena exon 695668 696903 . - . Parent=transcript:Rv0597c;Name=Rv0597c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0597c-1;rank=1 Chromosome ena CDS 695668 696903 . - 0 ID=CDS:Rv0597c;Parent=transcript:Rv0597c;protein_id=Rv0597c ### -Chromosome ena gene 697154 697567 . - . ID=gene:Rv0598c;Name=vapC27;biotype=protein_coding;description=Possible toxin VapC27. Contains PIN domain.;gene_id=Rv0598c;logic_name=ena +Chromosome ena gene 697154 697567 . - . ID=gene:Rv0598c;Name=vapC27;biotype=protein_coding;description=Possible toxin VapC27. Contains PIN domain.;gene_id=Rv0598c;logic_name=ena Chromosome ena mRNA 697154 697567 . - . ID=transcript:Rv0598c;Parent=gene:Rv0598c;Name=vapC27-1;biotype=protein_coding;transcript_id=Rv0598c Chromosome ena exon 697154 697567 . - . Parent=transcript:Rv0598c;Name=Rv0598c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0598c-1;rank=1 Chromosome ena CDS 697154 697567 . - 0 ID=CDS:Rv0598c;Parent=transcript:Rv0598c;protein_id=Rv0598c ### -Chromosome ena gene 697564 697800 . - . ID=gene:Rv0599c;Name=vapB27;biotype=protein_coding;description=Possible antitoxin VapB27;gene_id=Rv0599c;logic_name=ena +Chromosome ena gene 697564 697800 . - . ID=gene:Rv0599c;Name=vapB27;biotype=protein_coding;description=Possible antitoxin VapB27;gene_id=Rv0599c;logic_name=ena Chromosome ena mRNA 697564 697800 . - . ID=transcript:Rv0599c;Parent=gene:Rv0599c;Name=vapB27-1;biotype=protein_coding;transcript_id=Rv0599c Chromosome ena exon 697564 697800 . - . Parent=transcript:Rv0599c;Name=Rv0599c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0599c-1;rank=1 Chromosome ena CDS 697564 697800 . - 0 ID=CDS:Rv0599c;Parent=transcript:Rv0599c;protein_id=Rv0599c ### -Chromosome ena gene 697904 698410 . - . ID=gene:Rv0600c;biotype=protein_coding;description=Two component sensor kinase [second part];gene_id=Rv0600c;logic_name=ena +Chromosome ena gene 697904 698410 . - . ID=gene:Rv0600c;biotype=protein_coding;description=Two component sensor kinase [second part];gene_id=Rv0600c;logic_name=ena Chromosome ena mRNA 697904 698410 . - . ID=transcript:Rv0600c;Parent=gene:Rv0600c;biotype=protein_coding;transcript_id=Rv0600c Chromosome ena exon 697904 698410 . - . Parent=transcript:Rv0600c;Name=Rv0600c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0600c-1;rank=1 Chromosome ena CDS 697904 698410 . - 0 ID=CDS:Rv0600c;Parent=transcript:Rv0600c;protein_id=Rv0600c ### -Chromosome ena gene 698524 698994 . - . ID=gene:Rv0601c;biotype=protein_coding;description=Two component sensor kinase [first part];gene_id=Rv0601c;logic_name=ena +Chromosome ena gene 698524 698994 . - . ID=gene:Rv0601c;biotype=protein_coding;description=Two component sensor kinase [first part];gene_id=Rv0601c;logic_name=ena Chromosome ena mRNA 698524 698994 . - . ID=transcript:Rv0601c;Parent=gene:Rv0601c;biotype=protein_coding;transcript_id=Rv0601c Chromosome ena exon 698524 698994 . - . Parent=transcript:Rv0601c;Name=Rv0601c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0601c-1;rank=1 Chromosome ena CDS 698524 698994 . - 0 ID=CDS:Rv0601c;Parent=transcript:Rv0601c;protein_id=Rv0601c ### -Chromosome ena gene 699038 699799 . - . ID=gene:Rv0602c;Name=tcrA;biotype=protein_coding;description=Two component DNA binding transcriptional regulatory protein TcrA;gene_id=Rv0602c;logic_name=ena +Chromosome ena gene 699038 699799 . - . ID=gene:Rv0602c;Name=tcrA;biotype=protein_coding;description=Two component DNA binding transcriptional regulatory protein TcrA;gene_id=Rv0602c;logic_name=ena Chromosome ena mRNA 699038 699799 . - . ID=transcript:Rv0602c;Parent=gene:Rv0602c;Name=tcrA-1;biotype=protein_coding;transcript_id=Rv0602c Chromosome ena exon 699038 699799 . - . Parent=transcript:Rv0602c;Name=Rv0602c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0602c-1;rank=1 Chromosome ena CDS 699038 699799 . - 0 ID=CDS:Rv0602c;Parent=transcript:Rv0602c;protein_id=Rv0602c ### -Chromosome ena gene 699856 700167 . + . ID=gene:Rv0603;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0603;logic_name=ena +Chromosome ena gene 699856 700167 . + . ID=gene:Rv0603;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0603;logic_name=ena Chromosome ena mRNA 699856 700167 . + . ID=transcript:Rv0603;Parent=gene:Rv0603;biotype=protein_coding;transcript_id=Rv0603 Chromosome ena exon 699856 700167 . + . Parent=transcript:Rv0603;Name=Rv0603-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0603-1;rank=1 Chromosome ena CDS 699856 700167 . + 0 ID=CDS:Rv0603;Parent=transcript:Rv0603;protein_id=Rv0603 ### -Chromosome ena gene 700239 701189 . + . ID=gene:Rv0604;Name=lpqO;biotype=protein_coding;description=Probable conserved lipoprotein LpqO;gene_id=Rv0604;logic_name=ena +Chromosome ena gene 700239 701189 . + . ID=gene:Rv0604;Name=lpqO;biotype=protein_coding;description=Probable conserved lipoprotein LpqO;gene_id=Rv0604;logic_name=ena Chromosome ena mRNA 700239 701189 . + . ID=transcript:Rv0604;Parent=gene:Rv0604;Name=lpqO-1;biotype=protein_coding;transcript_id=Rv0604 Chromosome ena exon 700239 701189 . + . Parent=transcript:Rv0604;Name=Rv0604-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0604-1;rank=1 Chromosome ena CDS 700239 701189 . + 0 ID=CDS:Rv0604;Parent=transcript:Rv0604;protein_id=Rv0604 ### -Chromosome ena_mobile_element biological_region 701384 702767 . + . external_name=IS1536%2C len: 1384 nt. Partial copy of insertion sequence IS_1536. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element -Chromosome ena gene 701406 702014 . + . ID=gene:Rv0605;biotype=protein_coding;description=Possible resolvase;gene_id=Rv0605;logic_name=ena +Chromosome ena_mobile_element biological_region 701384 702767 . + . external_name=IS1536%2C len: 1384 nt. Partial copy of insertion sequence IS_1536. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element +Chromosome ena gene 701406 702014 . + . ID=gene:Rv0605;biotype=protein_coding;description=Possible resolvase;gene_id=Rv0605;logic_name=ena Chromosome ena mRNA 701406 702014 . + . ID=transcript:Rv0605;Parent=gene:Rv0605;biotype=protein_coding;transcript_id=Rv0605 Chromosome ena exon 701406 702014 . + . Parent=transcript:Rv0605;Name=Rv0605-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0605-1;rank=1 Chromosome ena CDS 701406 702014 . + 0 ID=CDS:Rv0605;Parent=transcript:Rv0605;protein_id=Rv0605 ### -Chromosome ena gene 702016 702759 . + . ID=gene:Rv0606;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv0606;logic_name=ena +Chromosome ena gene 702016 702759 . + . ID=gene:Rv0606;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv0606;logic_name=ena Chromosome ena mRNA 702016 702759 . + . ID=transcript:Rv0606;Parent=gene:Rv0606;biotype=protein_coding;transcript_id=Rv0606 Chromosome ena exon 702016 702759 . + . Parent=transcript:Rv0606;Name=Rv0606-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0606-1;rank=1 Chromosome ena CDS 702016 702759 . + 0 ID=CDS:Rv0606;Parent=transcript:Rv0606;protein_id=Rv0606 ### -Chromosome ena gene 702813 703199 . + . ID=gene:Rv0607;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0607;logic_name=ena +Chromosome ena gene 702813 703199 . + . ID=gene:Rv0607;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0607;logic_name=ena Chromosome ena mRNA 702813 703199 . + . ID=transcript:Rv0607;Parent=gene:Rv0607;biotype=protein_coding;transcript_id=Rv0607 Chromosome ena exon 702813 703199 . + . Parent=transcript:Rv0607;Name=Rv0607-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0607-1;rank=1 Chromosome ena CDS 702813 703199 . + 0 ID=CDS:Rv0607;Parent=transcript:Rv0607;protein_id=Rv0607 ### -Chromosome ena gene 703244 703489 . + . ID=gene:Rv0608;Name=vapB28;biotype=protein_coding;description=Possible antitoxin VapB28;gene_id=Rv0608;logic_name=ena +Chromosome ena gene 703244 703489 . + . ID=gene:Rv0608;Name=vapB28;biotype=protein_coding;description=Possible antitoxin VapB28;gene_id=Rv0608;logic_name=ena Chromosome ena mRNA 703244 703489 . + . ID=transcript:Rv0608;Parent=gene:Rv0608;Name=vapB28-1;biotype=protein_coding;transcript_id=Rv0608 Chromosome ena exon 703244 703489 . + . Parent=transcript:Rv0608;Name=Rv0608-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0608-1;rank=1 Chromosome ena CDS 703244 703489 . + 0 ID=CDS:Rv0608;Parent=transcript:Rv0608;protein_id=Rv0608 ### -Chromosome ena gene 703486 703887 . + . ID=gene:Rv0609;Name=vapC28;biotype=protein_coding;description=Possible toxin VapC28. Contains PIN domain.;gene_id=Rv0609;logic_name=ena +Chromosome ena gene 703486 703887 . + . ID=gene:Rv0609;Name=vapC28;biotype=protein_coding;description=Possible toxin VapC28. Contains PIN domain.;gene_id=Rv0609;logic_name=ena Chromosome ena mRNA 703486 703887 . + . ID=transcript:Rv0609;Parent=gene:Rv0609;Name=vapC28-1;biotype=protein_coding;transcript_id=Rv0609 Chromosome ena exon 703486 703887 . + . Parent=transcript:Rv0609;Name=Rv0609-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0609-1;rank=1 Chromosome ena CDS 703486 703887 . + 0 ID=CDS:Rv0609;Parent=transcript:Rv0609;protein_id=Rv0609 ### -Chromosome ena gene 703830 704057 . + . ID=gene:Rv0609A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0609A;logic_name=ena +Chromosome ena gene 703830 704057 . + . ID=gene:Rv0609A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0609A;logic_name=ena Chromosome ena mRNA 703830 704057 . + . ID=transcript:Rv0609A;Parent=gene:Rv0609A;biotype=protein_coding;transcript_id=Rv0609A Chromosome ena exon 703830 704057 . + . Parent=transcript:Rv0609A;Name=Rv0609A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0609A-1;rank=1 Chromosome ena CDS 703830 704057 . + 0 ID=CDS:Rv0609A;Parent=transcript:Rv0609A;protein_id=Rv0609A @@ -3182,137 +3182,137 @@ Chromosome ena transcript 704187 704247 . + . ID=transcript:EBG00000313383;Paren Chromosome ena exon 704187 704247 . + . Parent=transcript:EBG00000313383;Name=EBG00000313383;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313383;rank=1 ### Chromosome ena_gene biological_region 704187 704247 . + . external_name=AL123456.3:gene:704187..704247;logic_name=ena_gene -Chromosome ena gene 704752 705909 . - . ID=gene:Rv0610c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0610c;logic_name=ena +Chromosome ena gene 704752 705909 . - . ID=gene:Rv0610c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0610c;logic_name=ena Chromosome ena mRNA 704752 705909 . - . ID=transcript:Rv0610c;Parent=gene:Rv0610c;biotype=protein_coding;transcript_id=Rv0610c Chromosome ena exon 704752 705909 . - . Parent=transcript:Rv0610c;Name=Rv0610c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0610c-1;rank=1 Chromosome ena CDS 704752 705909 . - 0 ID=CDS:Rv0610c;Parent=transcript:Rv0610c;protein_id=Rv0610c ### -Chromosome ena gene 705961 706344 . - . ID=gene:Rv0611c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0611c;logic_name=ena +Chromosome ena gene 705961 706344 . - . ID=gene:Rv0611c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0611c;logic_name=ena Chromosome ena mRNA 705961 706344 . - . ID=transcript:Rv0611c;Parent=gene:Rv0611c;biotype=protein_coding;transcript_id=Rv0611c Chromosome ena exon 705961 706344 . - . Parent=transcript:Rv0611c;Name=Rv0611c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0611c-1;rank=1 Chromosome ena CDS 705961 706344 . - 0 ID=CDS:Rv0611c;Parent=transcript:Rv0611c;protein_id=Rv0611c ### -Chromosome ena gene 706324 706929 . + . ID=gene:Rv0612;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0612;logic_name=ena +Chromosome ena gene 706324 706929 . + . ID=gene:Rv0612;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0612;logic_name=ena Chromosome ena mRNA 706324 706929 . + . ID=transcript:Rv0612;Parent=gene:Rv0612;biotype=protein_coding;transcript_id=Rv0612 Chromosome ena exon 706324 706929 . + . Parent=transcript:Rv0612;Name=Rv0612-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0612-1;rank=1 Chromosome ena CDS 706324 706929 . + 0 ID=CDS:Rv0612;Parent=transcript:Rv0612;protein_id=Rv0612 ### -Chromosome ena gene 706948 709515 . - . ID=gene:Rv0613c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0613c;logic_name=ena +Chromosome ena gene 706948 709515 . - . ID=gene:Rv0613c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0613c;logic_name=ena Chromosome ena mRNA 706948 709515 . - . ID=transcript:Rv0613c;Parent=gene:Rv0613c;biotype=protein_coding;transcript_id=Rv0613c Chromosome ena exon 706948 709515 . - . Parent=transcript:Rv0613c;Name=Rv0613c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0613c-1;rank=1 Chromosome ena CDS 706948 709515 . - 0 ID=CDS:Rv0613c;Parent=transcript:Rv0613c;protein_id=Rv0613c ### -Chromosome ena gene 709356 710348 . + . ID=gene:Rv0614;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0614;logic_name=ena +Chromosome ena gene 709356 710348 . + . ID=gene:Rv0614;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0614;logic_name=ena Chromosome ena mRNA 709356 710348 . + . ID=transcript:Rv0614;Parent=gene:Rv0614;biotype=protein_coding;transcript_id=Rv0614 Chromosome ena exon 709356 710348 . + . Parent=transcript:Rv0614;Name=Rv0614-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0614-1;rank=1 Chromosome ena CDS 709356 710348 . + 0 ID=CDS:Rv0614;Parent=transcript:Rv0614;protein_id=Rv0614 ### -Chromosome ena gene 710345 710587 . + . ID=gene:Rv0615;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0615;logic_name=ena +Chromosome ena gene 710345 710587 . + . ID=gene:Rv0615;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0615;logic_name=ena Chromosome ena mRNA 710345 710587 . + . ID=transcript:Rv0615;Parent=gene:Rv0615;biotype=protein_coding;transcript_id=Rv0615 Chromosome ena exon 710345 710587 . + . Parent=transcript:Rv0615;Name=Rv0615-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0615-1;rank=1 Chromosome ena CDS 710345 710587 . + 0 ID=CDS:Rv0615;Parent=transcript:Rv0615;protein_id=Rv0615 ### -Chromosome ena gene 710584 710850 . - . ID=gene:Rv0616c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0616c;logic_name=ena +Chromosome ena gene 710584 710850 . - . ID=gene:Rv0616c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0616c;logic_name=ena Chromosome ena mRNA 710584 710850 . - . ID=transcript:Rv0616c;Parent=gene:Rv0616c;biotype=protein_coding;transcript_id=Rv0616c Chromosome ena exon 710584 710850 . - . Parent=transcript:Rv0616c;Name=Rv0616c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0616c-1;rank=1 Chromosome ena CDS 710584 710850 . - 0 ID=CDS:Rv0616c;Parent=transcript:Rv0616c;protein_id=Rv0616c ### -Chromosome ena gene 710782 711009 . + . ID=gene:Rv0616A;Name=vapB29;biotype=protein_coding;description=Possible antitoxin VapB29;gene_id=Rv0616A;logic_name=ena +Chromosome ena gene 710782 711009 . + . ID=gene:Rv0616A;Name=vapB29;biotype=protein_coding;description=Possible antitoxin VapB29;gene_id=Rv0616A;logic_name=ena Chromosome ena mRNA 710782 711009 . + . ID=transcript:Rv0616A;Parent=gene:Rv0616A;Name=vapB29-1;biotype=protein_coding;transcript_id=Rv0616A Chromosome ena exon 710782 711009 . + . Parent=transcript:Rv0616A;Name=Rv0616A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0616A-1;rank=1 Chromosome ena CDS 710782 711009 . + 0 ID=CDS:Rv0616A;Parent=transcript:Rv0616A;protein_id=Rv0616A ### -Chromosome ena gene 711006 711407 . + . ID=gene:Rv0617;Name=vapC29;biotype=protein_coding;description=Possible toxin VapC29. Contains PIN domain.;gene_id=Rv0617;logic_name=ena +Chromosome ena gene 711006 711407 . + . ID=gene:Rv0617;Name=vapC29;biotype=protein_coding;description=Possible toxin VapC29. Contains PIN domain.;gene_id=Rv0617;logic_name=ena Chromosome ena mRNA 711006 711407 . + . ID=transcript:Rv0617;Parent=gene:Rv0617;Name=vapC29-1;biotype=protein_coding;transcript_id=Rv0617 Chromosome ena exon 711006 711407 . + . Parent=transcript:Rv0617;Name=Rv0617-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0617-1;rank=1 Chromosome ena CDS 711006 711407 . + 0 ID=CDS:Rv0617;Parent=transcript:Rv0617;protein_id=Rv0617 ### -Chromosome ena gene 711536 712231 . + . ID=gene:Rv0618;Name=galTa;biotype=protein_coding;description=Probable galactose-1-phosphate uridylyltransferase GalTa [first part];gene_id=Rv0618;logic_name=ena +Chromosome ena gene 711536 712231 . + . ID=gene:Rv0618;Name=galTa;biotype=protein_coding;description=Probable galactose-1-phosphate uridylyltransferase GalTa [first part];gene_id=Rv0618;logic_name=ena Chromosome ena mRNA 711536 712231 . + . ID=transcript:Rv0618;Parent=gene:Rv0618;Name=galTa-1;biotype=protein_coding;transcript_id=Rv0618 Chromosome ena exon 711536 712231 . + . Parent=transcript:Rv0618;Name=Rv0618-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0618-1;rank=1 Chromosome ena CDS 711536 712231 . + 0 ID=CDS:Rv0618;Parent=transcript:Rv0618;protein_id=Rv0618 ### -Chromosome ena gene 712174 712719 . + . ID=gene:Rv0619;Name=galTb;biotype=protein_coding;description=Probable galactose-1-phosphate uridylyltransferase GalTb [second part];gene_id=Rv0619;logic_name=ena +Chromosome ena gene 712174 712719 . + . ID=gene:Rv0619;Name=galTb;biotype=protein_coding;description=Probable galactose-1-phosphate uridylyltransferase GalTb [second part];gene_id=Rv0619;logic_name=ena Chromosome ena mRNA 712174 712719 . + . ID=transcript:Rv0619;Parent=gene:Rv0619;Name=galTb-1;biotype=protein_coding;transcript_id=Rv0619 Chromosome ena exon 712174 712719 . + . Parent=transcript:Rv0619;Name=Rv0619-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0619-1;rank=1 Chromosome ena CDS 712174 712719 . + 0 ID=CDS:Rv0619;Parent=transcript:Rv0619;protein_id=Rv0619 ### -Chromosome ena gene 712716 713807 . + . ID=gene:Rv0620;Name=galK;biotype=protein_coding;description=Probable galactokinase GalK (galactose kinase);gene_id=Rv0620;logic_name=ena +Chromosome ena gene 712716 713807 . + . ID=gene:Rv0620;Name=galK;biotype=protein_coding;description=Probable galactokinase GalK (galactose kinase);gene_id=Rv0620;logic_name=ena Chromosome ena mRNA 712716 713807 . + . ID=transcript:Rv0620;Parent=gene:Rv0620;Name=galK-1;biotype=protein_coding;transcript_id=Rv0620 Chromosome ena exon 712716 713807 . + . Parent=transcript:Rv0620;Name=Rv0620-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0620-1;rank=1 Chromosome ena CDS 712716 713807 . + 0 ID=CDS:Rv0620;Parent=transcript:Rv0620;protein_id=Rv0620 ### -Chromosome ena gene 714202 715266 . + . ID=gene:Rv0621;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0621;logic_name=ena +Chromosome ena gene 714202 715266 . + . ID=gene:Rv0621;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0621;logic_name=ena Chromosome ena mRNA 714202 715266 . + . ID=transcript:Rv0621;Parent=gene:Rv0621;biotype=protein_coding;transcript_id=Rv0621 Chromosome ena exon 714202 715266 . + . Parent=transcript:Rv0621;Name=Rv0621-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0621-1;rank=1 Chromosome ena CDS 714202 715266 . + 0 ID=CDS:Rv0621;Parent=transcript:Rv0621;protein_id=Rv0621 ### -Chromosome ena gene 715370 716317 . + . ID=gene:Rv0622;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0622;logic_name=ena +Chromosome ena gene 715370 716317 . + . ID=gene:Rv0622;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0622;logic_name=ena Chromosome ena mRNA 715370 716317 . + . ID=transcript:Rv0622;Parent=gene:Rv0622;biotype=protein_coding;transcript_id=Rv0622 Chromosome ena exon 715370 716317 . + . Parent=transcript:Rv0622;Name=Rv0622-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0622-1;rank=1 Chromosome ena CDS 715370 716317 . + 0 ID=CDS:Rv0622;Parent=transcript:Rv0622;protein_id=Rv0622 ### -Chromosome ena gene 716410 716664 . + . ID=gene:Rv0623;Name=vapB30;biotype=protein_coding;description=Possible antitoxin VapB30;gene_id=Rv0623;logic_name=ena +Chromosome ena gene 716410 716664 . + . ID=gene:Rv0623;Name=vapB30;biotype=protein_coding;description=Possible antitoxin VapB30;gene_id=Rv0623;logic_name=ena Chromosome ena mRNA 716410 716664 . + . ID=transcript:Rv0623;Parent=gene:Rv0623;Name=vapB30-1;biotype=protein_coding;transcript_id=Rv0623 Chromosome ena exon 716410 716664 . + . Parent=transcript:Rv0623;Name=Rv0623-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0623-1;rank=1 Chromosome ena CDS 716410 716664 . + 0 ID=CDS:Rv0623;Parent=transcript:Rv0623;protein_id=Rv0623 ### -Chromosome ena gene 716664 717059 . + . ID=gene:Rv0624;Name=vapC30;biotype=protein_coding;description=Possible toxin VapC30. Contains PIN domain.;gene_id=Rv0624;logic_name=ena +Chromosome ena gene 716664 717059 . + . ID=gene:Rv0624;Name=vapC30;biotype=protein_coding;description=Possible toxin VapC30. Contains PIN domain.;gene_id=Rv0624;logic_name=ena Chromosome ena mRNA 716664 717059 . + . ID=transcript:Rv0624;Parent=gene:Rv0624;Name=vapC30-1;biotype=protein_coding;transcript_id=Rv0624 Chromosome ena exon 716664 717059 . + . Parent=transcript:Rv0624;Name=Rv0624-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0624-1;rank=1 Chromosome ena CDS 716664 717059 . + 0 ID=CDS:Rv0624;Parent=transcript:Rv0624;protein_id=Rv0624 ### -Chromosome ena gene 717153 717893 . - . ID=gene:Rv0625c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0625c;logic_name=ena +Chromosome ena gene 717153 717893 . - . ID=gene:Rv0625c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0625c;logic_name=ena Chromosome ena mRNA 717153 717893 . - . ID=transcript:Rv0625c;Parent=gene:Rv0625c;biotype=protein_coding;transcript_id=Rv0625c Chromosome ena exon 717153 717893 . - . Parent=transcript:Rv0625c;Name=Rv0625c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0625c-1;rank=1 Chromosome ena CDS 717153 717893 . - 0 ID=CDS:Rv0625c;Parent=transcript:Rv0625c;protein_id=Rv0625c ### -Chromosome ena gene 718025 718285 . + . ID=gene:Rv0626;Name=vapB5;biotype=protein_coding;description=Possible antitoxin VapB5;gene_id=Rv0626;logic_name=ena +Chromosome ena gene 718025 718285 . + . ID=gene:Rv0626;Name=vapB5;biotype=protein_coding;description=Possible antitoxin VapB5;gene_id=Rv0626;logic_name=ena Chromosome ena mRNA 718025 718285 . + . ID=transcript:Rv0626;Parent=gene:Rv0626;Name=vapB5-1;biotype=protein_coding;transcript_id=Rv0626 Chromosome ena exon 718025 718285 . + . Parent=transcript:Rv0626;Name=Rv0626-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0626-1;rank=1 Chromosome ena CDS 718025 718285 . + 0 ID=CDS:Rv0626;Parent=transcript:Rv0626;protein_id=Rv0626 ### -Chromosome ena gene 718282 718689 . + . ID=gene:Rv0627;Name=vapC5;biotype=protein_coding;description=Possible toxin VapC5;gene_id=Rv0627;logic_name=ena +Chromosome ena gene 718282 718689 . + . ID=gene:Rv0627;Name=vapC5;biotype=protein_coding;description=Possible toxin VapC5;gene_id=Rv0627;logic_name=ena Chromosome ena mRNA 718282 718689 . + . ID=transcript:Rv0627;Parent=gene:Rv0627;Name=vapC5-1;biotype=protein_coding;transcript_id=Rv0627 Chromosome ena exon 718282 718689 . + . Parent=transcript:Rv0627;Name=Rv0627-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0627-1;rank=1 Chromosome ena CDS 718282 718689 . + 0 ID=CDS:Rv0627;Parent=transcript:Rv0627;protein_id=Rv0627 ### -Chromosome ena gene 718761 719912 . - . ID=gene:Rv0628c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0628c;logic_name=ena +Chromosome ena gene 718761 719912 . - . ID=gene:Rv0628c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0628c;logic_name=ena Chromosome ena mRNA 718761 719912 . - . ID=transcript:Rv0628c;Parent=gene:Rv0628c;biotype=protein_coding;transcript_id=Rv0628c Chromosome ena exon 718761 719912 . - . Parent=transcript:Rv0628c;Name=Rv0628c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0628c-1;rank=1 Chromosome ena CDS 718761 719912 . - 0 ID=CDS:Rv0628c;Parent=transcript:Rv0628c;protein_id=Rv0628c ### -Chromosome ena gene 720005 721732 . - . ID=gene:Rv0629c;Name=recD;biotype=protein_coding;description=Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide);gene_id=Rv0629c;logic_name=ena +Chromosome ena gene 720005 721732 . - . ID=gene:Rv0629c;Name=recD;biotype=protein_coding;description=Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide);gene_id=Rv0629c;logic_name=ena Chromosome ena mRNA 720005 721732 . - . ID=transcript:Rv0629c;Parent=gene:Rv0629c;Name=recD-1;biotype=protein_coding;transcript_id=Rv0629c Chromosome ena exon 720005 721732 . - . Parent=transcript:Rv0629c;Name=Rv0629c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0629c-1;rank=1 Chromosome ena CDS 720005 721732 . - 0 ID=CDS:Rv0629c;Parent=transcript:Rv0629c;protein_id=Rv0629c ### -Chromosome ena gene 721729 725013 . - . ID=gene:Rv0630c;Name=recB;biotype=protein_coding;description=Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease);gene_id=Rv0630c;logic_name=ena +Chromosome ena gene 721729 725013 . - . ID=gene:Rv0630c;Name=recB;biotype=protein_coding;description=Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease);gene_id=Rv0630c;logic_name=ena Chromosome ena mRNA 721729 725013 . - . ID=transcript:Rv0630c;Parent=gene:Rv0630c;Name=recB-1;biotype=protein_coding;transcript_id=Rv0630c Chromosome ena exon 721729 725013 . - . Parent=transcript:Rv0630c;Name=Rv0630c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0630c-1;rank=1 Chromosome ena CDS 721729 725013 . - 0 ID=CDS:Rv0630c;Parent=transcript:Rv0630c;protein_id=Rv0630c ### -Chromosome ena gene 725013 728306 . - . ID=gene:Rv0631c;Name=recC;biotype=protein_coding;description=Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide);gene_id=Rv0631c;logic_name=ena +Chromosome ena gene 725013 728306 . - . ID=gene:Rv0631c;Name=recC;biotype=protein_coding;description=Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide);gene_id=Rv0631c;logic_name=ena Chromosome ena mRNA 725013 728306 . - . ID=transcript:Rv0631c;Parent=gene:Rv0631c;Name=recC-1;biotype=protein_coding;transcript_id=Rv0631c Chromosome ena exon 725013 728306 . - . Parent=transcript:Rv0631c;Name=Rv0631c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0631c-1;rank=1 Chromosome ena CDS 725013 728306 . - 0 ID=CDS:Rv0631c;Parent=transcript:Rv0631c;protein_id=Rv0631c ### -Chromosome ena gene 728583 729278 . - . ID=gene:Rv0632c;Name=echA3;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0632c;logic_name=ena +Chromosome ena gene 728583 729278 . - . ID=gene:Rv0632c;Name=echA3;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0632c;logic_name=ena Chromosome ena mRNA 728583 729278 . - . ID=transcript:Rv0632c;Parent=gene:Rv0632c;Name=echA3-1;biotype=protein_coding;transcript_id=Rv0632c Chromosome ena exon 728583 729278 . - . Parent=transcript:Rv0632c;Name=Rv0632c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0632c-1;rank=1 Chromosome ena CDS 728583 729278 . - 0 ID=CDS:Rv0632c;Parent=transcript:Rv0632c;protein_id=Rv0632c ### -Chromosome ena gene 729327 730166 . - . ID=gene:Rv0633c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0633c;logic_name=ena +Chromosome ena gene 729327 730166 . - . ID=gene:Rv0633c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv0633c;logic_name=ena Chromosome ena mRNA 729327 730166 . - . ID=transcript:Rv0633c;Parent=gene:Rv0633c;biotype=protein_coding;transcript_id=Rv0633c Chromosome ena exon 729327 730166 . - . Parent=transcript:Rv0633c;Name=Rv0633c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0633c-1;rank=1 Chromosome ena CDS 729327 730166 . - 0 ID=CDS:Rv0633c;Parent=transcript:Rv0633c;protein_id=Rv0633c ### -Chromosome ena gene 730320 731033 . - . ID=gene:Rv0634c;biotype=protein_coding;description=Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II);gene_id=Rv0634c;logic_name=ena +Chromosome ena gene 730320 731033 . - . ID=gene:Rv0634c;biotype=protein_coding;description=Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II);gene_id=Rv0634c;logic_name=ena Chromosome ena mRNA 730320 731033 . - . ID=transcript:Rv0634c;Parent=gene:Rv0634c;biotype=protein_coding;transcript_id=Rv0634c Chromosome ena exon 730320 731033 . - . Parent=transcript:Rv0634c;Name=Rv0634c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0634c-1;rank=1 Chromosome ena CDS 730320 731033 . - 0 ID=CDS:Rv0634c;Parent=transcript:Rv0634c;protein_id=Rv0634c ### -Chromosome ena gene 731113 731364 . + . ID=gene:Rv0634A;biotype=protein_coding;description=Unknown protein;gene_id=Rv0634A;logic_name=ena +Chromosome ena gene 731113 731364 . + . ID=gene:Rv0634A;biotype=protein_coding;description=Unknown protein;gene_id=Rv0634A;logic_name=ena Chromosome ena mRNA 731113 731364 . + . ID=transcript:Rv0634A;Parent=gene:Rv0634A;biotype=protein_coding;transcript_id=Rv0634A Chromosome ena exon 731113 731364 . + . Parent=transcript:Rv0634A;Name=Rv0634A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0634A-1;rank=1 Chromosome ena CDS 731113 731364 . + 0 ID=CDS:Rv0634A;Parent=transcript:Rv0634A;protein_id=Rv0634A @@ -3327,22 +3327,22 @@ Chromosome ena transcript 731603 731676 . + . ID=transcript:EBG00000313341;Paren Chromosome ena exon 731603 731676 . + . Parent=transcript:EBG00000313341;Name=EBG00000313341;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313341;rank=1 ### Chromosome ena_gene biological_region 731603 731676 . + . external_name=AL123456.3:gene:731603..731676;logic_name=ena_gene -Chromosome ena gene 731712 731879 . + . ID=gene:Rv0634B;Name=rpmG2;biotype=protein_coding;description=50S ribosomal protein L33 RpmG2;gene_id=Rv0634B;logic_name=ena +Chromosome ena gene 731712 731879 . + . ID=gene:Rv0634B;Name=rpmG2;biotype=protein_coding;description=50S ribosomal protein L33 RpmG2;gene_id=Rv0634B;logic_name=ena Chromosome ena mRNA 731712 731879 . + . ID=transcript:Rv0634B;Parent=gene:Rv0634B;Name=rpmG2-1;biotype=protein_coding;transcript_id=Rv0634B Chromosome ena exon 731712 731879 . + . Parent=transcript:Rv0634B;Name=Rv0634B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0634B-1;rank=1 Chromosome ena CDS 731712 731879 . + 0 ID=CDS:Rv0634B;Parent=transcript:Rv0634B;protein_id=Rv0634B ### -Chromosome ena gene 731930 732406 . + . ID=gene:Rv0635;Name=hadA;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;gene_id=Rv0635;logic_name=ena +Chromosome ena gene 731930 732406 . + . ID=gene:Rv0635;Name=hadA;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;gene_id=Rv0635;logic_name=ena Chromosome ena mRNA 731930 732406 . + . ID=transcript:Rv0635;Parent=gene:Rv0635;Name=hadA-1;biotype=protein_coding;transcript_id=Rv0635 Chromosome ena exon 731930 732406 . + . Parent=transcript:Rv0635;Name=Rv0635-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0635-1;rank=1 Chromosome ena CDS 731930 732406 . + 0 ID=CDS:Rv0635;Parent=transcript:Rv0635;protein_id=Rv0635 ### -Chromosome ena gene 732393 732821 . + . ID=gene:Rv0636;Name=hadB;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;gene_id=Rv0636;logic_name=ena +Chromosome ena gene 732393 732821 . + . ID=gene:Rv0636;Name=hadB;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;gene_id=Rv0636;logic_name=ena Chromosome ena mRNA 732393 732821 . + . ID=transcript:Rv0636;Parent=gene:Rv0636;Name=hadB-1;biotype=protein_coding;transcript_id=Rv0636 Chromosome ena exon 732393 732821 . + . Parent=transcript:Rv0636;Name=Rv0636-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0636-1;rank=1 Chromosome ena CDS 732393 732821 . + 0 ID=CDS:Rv0636;Parent=transcript:Rv0636;protein_id=Rv0636 ### -Chromosome ena gene 732825 733325 . + . ID=gene:Rv0637;Name=hadC;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;gene_id=Rv0637;logic_name=ena +Chromosome ena gene 732825 733325 . + . ID=gene:Rv0637;Name=hadC;biotype=protein_coding;description=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;gene_id=Rv0637;logic_name=ena Chromosome ena mRNA 732825 733325 . + . ID=transcript:Rv0637;Parent=gene:Rv0637;Name=hadC-1;biotype=protein_coding;transcript_id=Rv0637 Chromosome ena exon 732825 733325 . + . Parent=transcript:Rv0637;Name=Rv0637-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0637-1;rank=1 Chromosome ena CDS 732825 733325 . + 0 ID=CDS:Rv0637;Parent=transcript:Rv0637;protein_id=Rv0637 @@ -3352,52 +3352,52 @@ Chromosome ena transcript 733524 733596 . + . ID=transcript:EBG00000313381;Paren Chromosome ena exon 733524 733596 . + . Parent=transcript:EBG00000313381;Name=EBG00000313381;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313381;rank=1 ### Chromosome ena_gene biological_region 733524 733596 . + . external_name=AL123456.3:gene:733524..733596;logic_name=ena_gene -Chromosome ena gene 733737 734222 . + . ID=gene:Rv0638;Name=secE1;biotype=protein_coding;description=Probable preprotein translocase SecE1;gene_id=Rv0638;logic_name=ena +Chromosome ena gene 733737 734222 . + . ID=gene:Rv0638;Name=secE1;biotype=protein_coding;description=Probable preprotein translocase SecE1;gene_id=Rv0638;logic_name=ena Chromosome ena mRNA 733737 734222 . + . ID=transcript:Rv0638;Parent=gene:Rv0638;Name=secE1-1;biotype=protein_coding;transcript_id=Rv0638 Chromosome ena exon 733737 734222 . + . Parent=transcript:Rv0638;Name=Rv0638-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0638-1;rank=1 Chromosome ena CDS 733737 734222 . + 0 ID=CDS:Rv0638;Parent=transcript:Rv0638;protein_id=Rv0638 ### -Chromosome ena gene 734254 734970 . + . ID=gene:Rv0639;Name=nusG;biotype=protein_coding;description=Probable transcription antitermination protein NusG;gene_id=Rv0639;logic_name=ena +Chromosome ena gene 734254 734970 . + . ID=gene:Rv0639;Name=nusG;biotype=protein_coding;description=Probable transcription antitermination protein NusG;gene_id=Rv0639;logic_name=ena Chromosome ena mRNA 734254 734970 . + . ID=transcript:Rv0639;Parent=gene:Rv0639;Name=nusG-1;biotype=protein_coding;transcript_id=Rv0639 Chromosome ena exon 734254 734970 . + . Parent=transcript:Rv0639;Name=Rv0639-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0639-1;rank=1 Chromosome ena CDS 734254 734970 . + 0 ID=CDS:Rv0639;Parent=transcript:Rv0639;protein_id=Rv0639 ### -Chromosome ena gene 735022 735450 . + . ID=gene:Rv0640;Name=rplK;biotype=protein_coding;description=50S ribosomal protein L11 RplK;gene_id=Rv0640;logic_name=ena +Chromosome ena gene 735022 735450 . + . ID=gene:Rv0640;Name=rplK;biotype=protein_coding;description=50S ribosomal protein L11 RplK;gene_id=Rv0640;logic_name=ena Chromosome ena mRNA 735022 735450 . + . ID=transcript:Rv0640;Parent=gene:Rv0640;Name=rplK-1;biotype=protein_coding;transcript_id=Rv0640 Chromosome ena exon 735022 735450 . + . Parent=transcript:Rv0640;Name=Rv0640-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0640-1;rank=1 Chromosome ena CDS 735022 735450 . + 0 ID=CDS:Rv0640;Parent=transcript:Rv0640;protein_id=Rv0640 ### -Chromosome ena gene 735517 736224 . + . ID=gene:Rv0641;Name=rplA;biotype=protein_coding;description=50S ribosomal protein L1 RplA;gene_id=Rv0641;logic_name=ena +Chromosome ena gene 735517 736224 . + . ID=gene:Rv0641;Name=rplA;biotype=protein_coding;description=50S ribosomal protein L1 RplA;gene_id=Rv0641;logic_name=ena Chromosome ena mRNA 735517 736224 . + . ID=transcript:Rv0641;Parent=gene:Rv0641;Name=rplA-1;biotype=protein_coding;transcript_id=Rv0641 Chromosome ena exon 735517 736224 . + . Parent=transcript:Rv0641;Name=Rv0641-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0641-1;rank=1 Chromosome ena CDS 735517 736224 . + 0 ID=CDS:Rv0641;Parent=transcript:Rv0641;protein_id=Rv0641 ### -Chromosome ena gene 736298 737203 . - . ID=gene:Rv0642c;Name=mmaA4;biotype=protein_coding;description=Methoxy mycolic acid synthase 4 MmaA4 (methyl mycolic acid synthase 4) (MMA4) (hydroxy mycolic acid synthase);gene_id=Rv0642c;logic_name=ena +Chromosome ena gene 736298 737203 . - . ID=gene:Rv0642c;Name=mmaA4;biotype=protein_coding;description=Methoxy mycolic acid synthase 4 MmaA4 (methyl mycolic acid synthase 4) (MMA4) (hydroxy mycolic acid synthase);gene_id=Rv0642c;logic_name=ena Chromosome ena mRNA 736298 737203 . - . ID=transcript:Rv0642c;Parent=gene:Rv0642c;Name=mmaA4-1;biotype=protein_coding;transcript_id=Rv0642c Chromosome ena exon 736298 737203 . - . Parent=transcript:Rv0642c;Name=Rv0642c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0642c-1;rank=1 Chromosome ena CDS 736298 737203 . - 0 ID=CDS:Rv0642c;Parent=transcript:Rv0642c;protein_id=Rv0642c ### -Chromosome ena gene 737268 738149 . - . ID=gene:Rv0643c;Name=mmaA3;biotype=protein_coding;description=Methoxy mycolic acid synthase 3 MmaA3 (methyl mycolic acid synthase 3) (MMA3) (hydroxy mycolic acid synthase);gene_id=Rv0643c;logic_name=ena +Chromosome ena gene 737268 738149 . - . ID=gene:Rv0643c;Name=mmaA3;biotype=protein_coding;description=Methoxy mycolic acid synthase 3 MmaA3 (methyl mycolic acid synthase 3) (MMA3) (hydroxy mycolic acid synthase);gene_id=Rv0643c;logic_name=ena Chromosome ena mRNA 737268 738149 . - . ID=transcript:Rv0643c;Parent=gene:Rv0643c;Name=mmaA3-1;biotype=protein_coding;transcript_id=Rv0643c Chromosome ena exon 737268 738149 . - . Parent=transcript:Rv0643c;Name=Rv0643c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0643c-1;rank=1 Chromosome ena CDS 737268 738149 . - 0 ID=CDS:Rv0643c;Parent=transcript:Rv0643c;protein_id=Rv0643c ### -Chromosome ena gene 738297 739160 . - . ID=gene:Rv0644c;Name=mmaA2;biotype=protein_coding;description=Methoxy mycolic acid synthase 2 MmaA2 (methyl mycolic acid synthase 2) (MMA2) (hydroxy mycolic acid synthase);gene_id=Rv0644c;logic_name=ena +Chromosome ena gene 738297 739160 . - . ID=gene:Rv0644c;Name=mmaA2;biotype=protein_coding;description=Methoxy mycolic acid synthase 2 MmaA2 (methyl mycolic acid synthase 2) (MMA2) (hydroxy mycolic acid synthase);gene_id=Rv0644c;logic_name=ena Chromosome ena mRNA 738297 739160 . - . ID=transcript:Rv0644c;Parent=gene:Rv0644c;Name=mmaA2-1;biotype=protein_coding;transcript_id=Rv0644c Chromosome ena exon 738297 739160 . - . Parent=transcript:Rv0644c;Name=Rv0644c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0644c-1;rank=1 Chromosome ena CDS 738297 739160 . - 0 ID=CDS:Rv0644c;Parent=transcript:Rv0644c;protein_id=Rv0644c ### -Chromosome ena gene 739327 740187 . - . ID=gene:Rv0645c;Name=mmaA1;biotype=protein_coding;description=Methoxy mycolic acid synthase 1 MmaA1 (methyl mycolic acid synthase 1) (MMA1) (hydroxy mycolic acid synthase);gene_id=Rv0645c;logic_name=ena +Chromosome ena gene 739327 740187 . - . ID=gene:Rv0645c;Name=mmaA1;biotype=protein_coding;description=Methoxy mycolic acid synthase 1 MmaA1 (methyl mycolic acid synthase 1) (MMA1) (hydroxy mycolic acid synthase);gene_id=Rv0645c;logic_name=ena Chromosome ena mRNA 739327 740187 . - . ID=transcript:Rv0645c;Parent=gene:Rv0645c;Name=mmaA1-1;biotype=protein_coding;transcript_id=Rv0645c Chromosome ena exon 739327 740187 . - . Parent=transcript:Rv0645c;Name=Rv0645c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0645c-1;rank=1 Chromosome ena CDS 739327 740187 . - 0 ID=CDS:Rv0645c;Parent=transcript:Rv0645c;protein_id=Rv0645c ### -Chromosome ena gene 740234 741139 . - . ID=gene:Rv0646c;Name=lipG;biotype=protein_coding;description=Probable lipase/esterase LipG;gene_id=Rv0646c;logic_name=ena +Chromosome ena gene 740234 741139 . - . ID=gene:Rv0646c;Name=lipG;biotype=protein_coding;description=Probable lipase/esterase LipG;gene_id=Rv0646c;logic_name=ena Chromosome ena mRNA 740234 741139 . - . ID=transcript:Rv0646c;Parent=gene:Rv0646c;Name=lipG-1;biotype=protein_coding;transcript_id=Rv0646c Chromosome ena exon 740234 741139 . - . Parent=transcript:Rv0646c;Name=Rv0646c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0646c-1;rank=1 Chromosome ena CDS 740234 741139 . - 0 ID=CDS:Rv0646c;Parent=transcript:Rv0646c;protein_id=Rv0646c ### -Chromosome ena gene 741151 742617 . - . ID=gene:Rv0647c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0647c;logic_name=ena +Chromosome ena gene 741151 742617 . - . ID=gene:Rv0647c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0647c;logic_name=ena Chromosome ena mRNA 741151 742617 . - . ID=transcript:Rv0647c;Parent=gene:Rv0647c;biotype=protein_coding;transcript_id=Rv0647c Chromosome ena exon 741151 742617 . - . Parent=transcript:Rv0647c;Name=Rv0647c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0647c-1;rank=1 Chromosome ena CDS 741151 742617 . - 0 ID=CDS:Rv0647c;Parent=transcript:Rv0647c;protein_id=Rv0647c @@ -3407,558 +3407,558 @@ Chromosome ena mRNA 742719 746366 . + . ID=transcript:Rv0648;Parent=gene:Rv0648; Chromosome ena exon 742719 746366 . + . Parent=transcript:Rv0648;Name=Rv0648-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0648-1;rank=1 Chromosome ena CDS 742719 746366 . + 0 ID=CDS:Rv0648;Parent=transcript:Rv0648;protein_id=Rv0648 ### -Chromosome ena gene 746363 747037 . + . ID=gene:Rv0649;Name=fabD2;biotype=protein_coding;description=Possible malonyl CoA-acyl carrier protein transacylase FabD2 (MCT);gene_id=Rv0649;logic_name=ena +Chromosome ena gene 746363 747037 . + . ID=gene:Rv0649;Name=fabD2;biotype=protein_coding;description=Possible malonyl CoA-acyl carrier protein transacylase FabD2 (MCT);gene_id=Rv0649;logic_name=ena Chromosome ena mRNA 746363 747037 . + . ID=transcript:Rv0649;Parent=gene:Rv0649;Name=fabD2-1;biotype=protein_coding;transcript_id=Rv0649 Chromosome ena exon 746363 747037 . + . Parent=transcript:Rv0649;Name=Rv0649-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0649-1;rank=1 Chromosome ena CDS 746363 747037 . + 0 ID=CDS:Rv0649;Parent=transcript:Rv0649;protein_id=Rv0649 ### -Chromosome ena gene 747037 747945 . + . ID=gene:Rv0650;biotype=protein_coding;description=Possible sugar kinase;gene_id=Rv0650;logic_name=ena +Chromosome ena gene 747037 747945 . + . ID=gene:Rv0650;biotype=protein_coding;description=Possible sugar kinase;gene_id=Rv0650;logic_name=ena Chromosome ena mRNA 747037 747945 . + . ID=transcript:Rv0650;Parent=gene:Rv0650;biotype=protein_coding;transcript_id=Rv0650 Chromosome ena exon 747037 747945 . + . Parent=transcript:Rv0650;Name=Rv0650-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0650-1;rank=1 Chromosome ena CDS 747037 747945 . + 0 ID=CDS:Rv0650;Parent=transcript:Rv0650;protein_id=Rv0650 ### -Chromosome ena gene 748276 748812 . + . ID=gene:Rv0651;Name=rplJ;biotype=protein_coding;description=50S ribosomal protein L10 RplJ;gene_id=Rv0651;logic_name=ena +Chromosome ena gene 748276 748812 . + . ID=gene:Rv0651;Name=rplJ;biotype=protein_coding;description=50S ribosomal protein L10 RplJ;gene_id=Rv0651;logic_name=ena Chromosome ena mRNA 748276 748812 . + . ID=transcript:Rv0651;Parent=gene:Rv0651;Name=rplJ-1;biotype=protein_coding;transcript_id=Rv0651 Chromosome ena exon 748276 748812 . + . Parent=transcript:Rv0651;Name=Rv0651-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0651-1;rank=1 Chromosome ena CDS 748276 748812 . + 0 ID=CDS:Rv0651;Parent=transcript:Rv0651;protein_id=Rv0651 ### -Chromosome ena gene 748849 749241 . + . ID=gene:Rv0652;Name=rplL;biotype=protein_coding;description=50S ribosomal protein L7/L12 RplL (SA1);gene_id=Rv0652;logic_name=ena +Chromosome ena gene 748849 749241 . + . ID=gene:Rv0652;Name=rplL;biotype=protein_coding;description=50S ribosomal protein L7/L12 RplL (SA1);gene_id=Rv0652;logic_name=ena Chromosome ena mRNA 748849 749241 . + . ID=transcript:Rv0652;Parent=gene:Rv0652;Name=rplL-1;biotype=protein_coding;transcript_id=Rv0652 Chromosome ena exon 748849 749241 . + . Parent=transcript:Rv0652;Name=Rv0652-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0652-1;rank=1 Chromosome ena CDS 748849 749241 . + 0 ID=CDS:Rv0652;Parent=transcript:Rv0652;protein_id=Rv0652 ### -Chromosome ena gene 749234 749929 . - . ID=gene:Rv0653c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv0653c;logic_name=ena +Chromosome ena gene 749234 749929 . - . ID=gene:Rv0653c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv0653c;logic_name=ena Chromosome ena mRNA 749234 749929 . - . ID=transcript:Rv0653c;Parent=gene:Rv0653c;biotype=protein_coding;transcript_id=Rv0653c Chromosome ena exon 749234 749929 . - . Parent=transcript:Rv0653c;Name=Rv0653c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0653c-1;rank=1 Chromosome ena CDS 749234 749929 . - 0 ID=CDS:Rv0653c;Parent=transcript:Rv0653c;protein_id=Rv0653c ### -Chromosome ena gene 750000 751505 . + . ID=gene:Rv0654;biotype=protein_coding;description=Probable dioxygenase;gene_id=Rv0654;logic_name=ena +Chromosome ena gene 750000 751505 . + . ID=gene:Rv0654;biotype=protein_coding;description=Probable dioxygenase;gene_id=Rv0654;logic_name=ena Chromosome ena mRNA 750000 751505 . + . ID=transcript:Rv0654;Parent=gene:Rv0654;biotype=protein_coding;transcript_id=Rv0654 Chromosome ena exon 750000 751505 . + . Parent=transcript:Rv0654;Name=Rv0654-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0654-1;rank=1 Chromosome ena CDS 750000 751505 . + 0 ID=CDS:Rv0654;Parent=transcript:Rv0654;protein_id=Rv0654 ### -Chromosome ena gene 751517 752596 . + . ID=gene:Rv0655;Name=mkl;biotype=protein_coding;description=Possible ribonucleotide-transport ATP-binding protein ABC transporter Mkl;gene_id=Rv0655;logic_name=ena +Chromosome ena gene 751517 752596 . + . ID=gene:Rv0655;Name=mkl;biotype=protein_coding;description=Possible ribonucleotide-transport ATP-binding protein ABC transporter Mkl;gene_id=Rv0655;logic_name=ena Chromosome ena mRNA 751517 752596 . + . ID=transcript:Rv0655;Parent=gene:Rv0655;Name=mkl-1;biotype=protein_coding;transcript_id=Rv0655 Chromosome ena exon 751517 752596 . + . Parent=transcript:Rv0655;Name=Rv0655-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0655-1;rank=1 Chromosome ena CDS 751517 752596 . + 0 ID=CDS:Rv0655;Parent=transcript:Rv0655;protein_id=Rv0655 ### -Chromosome ena gene 752984 753367 . - . ID=gene:Rv0656c;Name=vapC6;biotype=protein_coding;description=Possible toxin VapC6;gene_id=Rv0656c;logic_name=ena +Chromosome ena gene 752984 753367 . - . ID=gene:Rv0656c;Name=vapC6;biotype=protein_coding;description=Possible toxin VapC6;gene_id=Rv0656c;logic_name=ena Chromosome ena mRNA 752984 753367 . - . ID=transcript:Rv0656c;Parent=gene:Rv0656c;Name=vapC6-1;biotype=protein_coding;transcript_id=Rv0656c Chromosome ena exon 752984 753367 . - . Parent=transcript:Rv0656c;Name=Rv0656c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0656c-1;rank=1 Chromosome ena CDS 752984 753367 . - 0 ID=CDS:Rv0656c;Parent=transcript:Rv0656c;protein_id=Rv0656c ### -Chromosome ena gene 753462 753617 . - . ID=gene:Rv0657c;Name=vapB6;biotype=protein_coding;description=Possible antitoxin VapB6;gene_id=Rv0657c;logic_name=ena +Chromosome ena gene 753462 753617 . - . ID=gene:Rv0657c;Name=vapB6;biotype=protein_coding;description=Possible antitoxin VapB6;gene_id=Rv0657c;logic_name=ena Chromosome ena mRNA 753462 753617 . - . ID=transcript:Rv0657c;Parent=gene:Rv0657c;Name=vapB6-1;biotype=protein_coding;transcript_id=Rv0657c Chromosome ena exon 753462 753617 . - . Parent=transcript:Rv0657c;Name=Rv0657c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0657c-1;rank=1 Chromosome ena CDS 753462 753617 . - 0 ID=CDS:Rv0657c;Parent=transcript:Rv0657c;protein_id=Rv0657c ### -Chromosome ena gene 753693 754409 . - . ID=gene:Rv0658c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0658c;logic_name=ena +Chromosome ena gene 753693 754409 . - . ID=gene:Rv0658c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0658c;logic_name=ena Chromosome ena mRNA 753693 754409 . - . ID=transcript:Rv0658c;Parent=gene:Rv0658c;biotype=protein_coding;transcript_id=Rv0658c Chromosome ena exon 753693 754409 . - . Parent=transcript:Rv0658c;Name=Rv0658c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0658c-1;rank=1 Chromosome ena CDS 753693 754409 . - 0 ID=CDS:Rv0658c;Parent=transcript:Rv0658c;protein_id=Rv0658c ### -Chromosome ena gene 754685 754993 . - . ID=gene:Rv0659c;Name=mazF2;biotype=protein_coding;description=Toxin MazF2;gene_id=Rv0659c;logic_name=ena +Chromosome ena gene 754685 754993 . - . ID=gene:Rv0659c;Name=mazF2;biotype=protein_coding;description=Toxin MazF2;gene_id=Rv0659c;logic_name=ena Chromosome ena mRNA 754685 754993 . - . ID=transcript:Rv0659c;Parent=gene:Rv0659c;Name=mazF2-1;biotype=protein_coding;transcript_id=Rv0659c Chromosome ena exon 754685 754993 . - . Parent=transcript:Rv0659c;Name=Rv0659c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0659c-1;rank=1 Chromosome ena CDS 754685 754993 . - 0 ID=CDS:Rv0659c;Parent=transcript:Rv0659c;protein_id=Rv0659c ### -Chromosome ena gene 754980 755225 . - . ID=gene:Rv0660c;Name=mazE2;biotype=protein_coding;description=Possible antitoxin MazE2;gene_id=Rv0660c;logic_name=ena +Chromosome ena gene 754980 755225 . - . ID=gene:Rv0660c;Name=mazE2;biotype=protein_coding;description=Possible antitoxin MazE2;gene_id=Rv0660c;logic_name=ena Chromosome ena mRNA 754980 755225 . - . ID=transcript:Rv0660c;Parent=gene:Rv0660c;Name=mazE2-1;biotype=protein_coding;transcript_id=Rv0660c Chromosome ena exon 754980 755225 . - . Parent=transcript:Rv0660c;Name=Rv0660c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0660c-1;rank=1 Chromosome ena CDS 754980 755225 . - 0 ID=CDS:Rv0660c;Parent=transcript:Rv0660c;protein_id=Rv0660c ### -Chromosome ena gene 755335 755772 . - . ID=gene:Rv0661c;Name=vapC7;biotype=protein_coding;description=Possible toxin VapC7;gene_id=Rv0661c;logic_name=ena +Chromosome ena gene 755335 755772 . - . ID=gene:Rv0661c;Name=vapC7;biotype=protein_coding;description=Possible toxin VapC7;gene_id=Rv0661c;logic_name=ena Chromosome ena mRNA 755335 755772 . - . ID=transcript:Rv0661c;Parent=gene:Rv0661c;Name=vapC7-1;biotype=protein_coding;transcript_id=Rv0661c Chromosome ena exon 755335 755772 . - . Parent=transcript:Rv0661c;Name=Rv0661c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0661c-1;rank=1 Chromosome ena CDS 755335 755772 . - 0 ID=CDS:Rv0661c;Parent=transcript:Rv0661c;protein_id=Rv0661c ### -Chromosome ena gene 755769 756023 . - . ID=gene:Rv0662c;Name=vapB7;biotype=protein_coding;description=Possible antitoxin VapB7;gene_id=Rv0662c;logic_name=ena +Chromosome ena gene 755769 756023 . - . ID=gene:Rv0662c;Name=vapB7;biotype=protein_coding;description=Possible antitoxin VapB7;gene_id=Rv0662c;logic_name=ena Chromosome ena mRNA 755769 756023 . - . ID=transcript:Rv0662c;Parent=gene:Rv0662c;Name=vapB7-1;biotype=protein_coding;transcript_id=Rv0662c Chromosome ena exon 755769 756023 . - . Parent=transcript:Rv0662c;Name=Rv0662c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0662c-1;rank=1 Chromosome ena CDS 755769 756023 . - 0 ID=CDS:Rv0662c;Parent=transcript:Rv0662c;protein_id=Rv0662c ### -Chromosome ena gene 756137 758500 . + . ID=gene:Rv0663;Name=atsD;biotype=protein_coding;description=Possible arylsulfatase AtsD (aryl-sulfate sulphohydrolase) (arylsulphatase);gene_id=Rv0663;logic_name=ena +Chromosome ena gene 756137 758500 . + . ID=gene:Rv0663;Name=atsD;biotype=protein_coding;description=Possible arylsulfatase AtsD (aryl-sulfate sulphohydrolase) (arylsulphatase);gene_id=Rv0663;logic_name=ena Chromosome ena mRNA 756137 758500 . + . ID=transcript:Rv0663;Parent=gene:Rv0663;Name=atsD-1;biotype=protein_coding;transcript_id=Rv0663 Chromosome ena exon 756137 758500 . + . Parent=transcript:Rv0663;Name=Rv0663-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0663-1;rank=1 Chromosome ena CDS 756137 758500 . + 0 ID=CDS:Rv0663;Parent=transcript:Rv0663;protein_id=Rv0663 ### -Chromosome ena gene 758532 758804 . + . ID=gene:Rv0664;Name=vapB8;biotype=protein_coding;description=Possible antitoxin VapB8;gene_id=Rv0664;logic_name=ena +Chromosome ena gene 758532 758804 . + . ID=gene:Rv0664;Name=vapB8;biotype=protein_coding;description=Possible antitoxin VapB8;gene_id=Rv0664;logic_name=ena Chromosome ena mRNA 758532 758804 . + . ID=transcript:Rv0664;Parent=gene:Rv0664;Name=vapB8-1;biotype=protein_coding;transcript_id=Rv0664 Chromosome ena exon 758532 758804 . + . Parent=transcript:Rv0664;Name=Rv0664-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0664-1;rank=1 Chromosome ena CDS 758532 758804 . + 0 ID=CDS:Rv0664;Parent=transcript:Rv0664;protein_id=Rv0664 ### -Chromosome ena gene 758801 759139 . + . ID=gene:Rv0665;Name=vapC8;biotype=protein_coding;description=Possible toxin VapC8;gene_id=Rv0665;logic_name=ena +Chromosome ena gene 758801 759139 . + . ID=gene:Rv0665;Name=vapC8;biotype=protein_coding;description=Possible toxin VapC8;gene_id=Rv0665;logic_name=ena Chromosome ena mRNA 758801 759139 . + . ID=transcript:Rv0665;Parent=gene:Rv0665;Name=vapC8-1;biotype=protein_coding;transcript_id=Rv0665 Chromosome ena exon 758801 759139 . + . Parent=transcript:Rv0665;Name=Rv0665-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0665-1;rank=1 Chromosome ena CDS 758801 759139 . + 0 ID=CDS:Rv0665;Parent=transcript:Rv0665;protein_id=Rv0665 ### -Chromosome ena gene 759136 759309 . + . ID=gene:Rv0666;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0666;logic_name=ena +Chromosome ena gene 759136 759309 . + . ID=gene:Rv0666;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0666;logic_name=ena Chromosome ena mRNA 759136 759309 . + . ID=transcript:Rv0666;Parent=gene:Rv0666;biotype=protein_coding;transcript_id=Rv0666 Chromosome ena exon 759136 759309 . + . Parent=transcript:Rv0666;Name=Rv0666-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0666-1;rank=1 Chromosome ena CDS 759136 759309 . + 0 ID=CDS:Rv0666;Parent=transcript:Rv0666;protein_id=Rv0666 ### -Chromosome ena gene 759807 763325 . + . ID=gene:Rv0667;Name=rpoB;biotype=protein_coding;description=DNA-directed RNA polymerase (beta chain) RpoB (transcriptase beta chain) (RNA polymerase beta subunit);gene_id=Rv0667;logic_name=ena +Chromosome ena gene 759807 763325 . + . ID=gene:Rv0667;Name=rpoB;biotype=protein_coding;description=DNA-directed RNA polymerase (beta chain) RpoB (transcriptase beta chain) (RNA polymerase beta subunit);gene_id=Rv0667;logic_name=ena Chromosome ena mRNA 759807 763325 . + . ID=transcript:Rv0667;Parent=gene:Rv0667;Name=rpoB-1;biotype=protein_coding;transcript_id=Rv0667 Chromosome ena exon 759807 763325 . + . Parent=transcript:Rv0667;Name=Rv0667-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0667-1;rank=1 Chromosome ena CDS 759807 763325 . + 0 ID=CDS:Rv0667;Parent=transcript:Rv0667;protein_id=Rv0667 ### -Chromosome ena gene 763370 767320 . + . ID=gene:Rv0668;Name=rpoC;biotype=protein_coding;description=DNA-directed RNA polymerase (beta' chain) RpoC (transcriptase beta' chain) (RNA polymerase beta' subunit).;gene_id=Rv0668;logic_name=ena +Chromosome ena gene 763370 767320 . + . ID=gene:Rv0668;Name=rpoC;biotype=protein_coding;description=DNA-directed RNA polymerase (beta' chain) RpoC (transcriptase beta' chain) (RNA polymerase beta' subunit).;gene_id=Rv0668;logic_name=ena Chromosome ena mRNA 763370 767320 . + . ID=transcript:Rv0668;Parent=gene:Rv0668;Name=rpoC-1;biotype=protein_coding;transcript_id=Rv0668 Chromosome ena exon 763370 767320 . + . Parent=transcript:Rv0668;Name=Rv0668-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0668-1;rank=1 Chromosome ena CDS 763370 767320 . + 0 ID=CDS:Rv0668;Parent=transcript:Rv0668;protein_id=Rv0668 ### -Chromosome ena gene 767684 769597 . - . ID=gene:Rv0669c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv0669c;logic_name=ena +Chromosome ena gene 767684 769597 . - . ID=gene:Rv0669c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv0669c;logic_name=ena Chromosome ena mRNA 767684 769597 . - . ID=transcript:Rv0669c;Parent=gene:Rv0669c;biotype=protein_coding;transcript_id=Rv0669c Chromosome ena exon 767684 769597 . - . Parent=transcript:Rv0669c;Name=Rv0669c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0669c-1;rank=1 Chromosome ena CDS 767684 769597 . - 0 ID=CDS:Rv0669c;Parent=transcript:Rv0669c;protein_id=Rv0669c ### -Chromosome ena gene 769792 770550 . + . ID=gene:Rv0670;Name=end;biotype=protein_coding;description=Probable endonuclease IV End (endodeoxyribonuclease IV) (apurinase);gene_id=Rv0670;logic_name=ena +Chromosome ena gene 769792 770550 . + . ID=gene:Rv0670;Name=end;biotype=protein_coding;description=Probable endonuclease IV End (endodeoxyribonuclease IV) (apurinase);gene_id=Rv0670;logic_name=ena Chromosome ena mRNA 769792 770550 . + . ID=transcript:Rv0670;Parent=gene:Rv0670;Name=end-1;biotype=protein_coding;transcript_id=Rv0670 Chromosome ena exon 769792 770550 . + . Parent=transcript:Rv0670;Name=Rv0670-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0670-1;rank=1 Chromosome ena CDS 769792 770550 . + 0 ID=CDS:Rv0670;Parent=transcript:Rv0670;protein_id=Rv0670 ### -Chromosome ena gene 770582 771424 . + . ID=gene:Rv0671;Name=lpqP;biotype=protein_coding;description=Possible conserved lipoprotein LpqP;gene_id=Rv0671;logic_name=ena +Chromosome ena gene 770582 771424 . + . ID=gene:Rv0671;Name=lpqP;biotype=protein_coding;description=Possible conserved lipoprotein LpqP;gene_id=Rv0671;logic_name=ena Chromosome ena mRNA 770582 771424 . + . ID=transcript:Rv0671;Parent=gene:Rv0671;Name=lpqP-1;biotype=protein_coding;transcript_id=Rv0671 Chromosome ena exon 770582 771424 . + . Parent=transcript:Rv0671;Name=Rv0671-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0671-1;rank=1 Chromosome ena CDS 770582 771424 . + 0 ID=CDS:Rv0671;Parent=transcript:Rv0671;protein_id=Rv0671 ### -Chromosome ena gene 771484 773112 . + . ID=gene:Rv0672;Name=fadE8;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE8;gene_id=Rv0672;logic_name=ena +Chromosome ena gene 771484 773112 . + . ID=gene:Rv0672;Name=fadE8;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE8;gene_id=Rv0672;logic_name=ena Chromosome ena mRNA 771484 773112 . + . ID=transcript:Rv0672;Parent=gene:Rv0672;Name=fadE8-1;biotype=protein_coding;transcript_id=Rv0672 Chromosome ena exon 771484 773112 . + . Parent=transcript:Rv0672;Name=Rv0672-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0672-1;rank=1 Chromosome ena CDS 771484 773112 . + 0 ID=CDS:Rv0672;Parent=transcript:Rv0672;protein_id=Rv0672 ### -Chromosome ena gene 773123 774061 . + . ID=gene:Rv0673;Name=echA4;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA4 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0673;logic_name=ena +Chromosome ena gene 773123 774061 . + . ID=gene:Rv0673;Name=echA4;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA4 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0673;logic_name=ena Chromosome ena mRNA 773123 774061 . + . ID=transcript:Rv0673;Parent=gene:Rv0673;Name=echA4-1;biotype=protein_coding;transcript_id=Rv0673 Chromosome ena exon 773123 774061 . + . Parent=transcript:Rv0673;Name=Rv0673-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0673-1;rank=1 Chromosome ena CDS 773123 774061 . + 0 ID=CDS:Rv0673;Parent=transcript:Rv0673;protein_id=Rv0673 ### -Chromosome ena gene 774064 774786 . + . ID=gene:Rv0674;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0674;logic_name=ena +Chromosome ena gene 774064 774786 . + . ID=gene:Rv0674;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0674;logic_name=ena Chromosome ena mRNA 774064 774786 . + . ID=transcript:Rv0674;Parent=gene:Rv0674;biotype=protein_coding;transcript_id=Rv0674 Chromosome ena exon 774064 774786 . + . Parent=transcript:Rv0674;Name=Rv0674-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0674-1;rank=1 Chromosome ena CDS 774064 774786 . + 0 ID=CDS:Rv0674;Parent=transcript:Rv0674;protein_id=Rv0674 ### -Chromosome ena gene 774783 775574 . + . ID=gene:Rv0675;Name=echA5;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA5 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0675;logic_name=ena +Chromosome ena gene 774783 775574 . + . ID=gene:Rv0675;Name=echA5;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA5 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0675;logic_name=ena Chromosome ena mRNA 774783 775574 . + . ID=transcript:Rv0675;Parent=gene:Rv0675;Name=echA5-1;biotype=protein_coding;transcript_id=Rv0675 Chromosome ena exon 774783 775574 . + . Parent=transcript:Rv0675;Name=Rv0675-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0675-1;rank=1 Chromosome ena CDS 774783 775574 . + 0 ID=CDS:Rv0675;Parent=transcript:Rv0675;protein_id=Rv0675 ### -Chromosome ena gene 775586 778480 . - . ID=gene:Rv0676c;Name=mmpL5;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL5;gene_id=Rv0676c;logic_name=ena +Chromosome ena gene 775586 778480 . - . ID=gene:Rv0676c;Name=mmpL5;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL5;gene_id=Rv0676c;logic_name=ena Chromosome ena mRNA 775586 778480 . - . ID=transcript:Rv0676c;Parent=gene:Rv0676c;Name=mmpL5-1;biotype=protein_coding;transcript_id=Rv0676c Chromosome ena exon 775586 778480 . - . Parent=transcript:Rv0676c;Name=Rv0676c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0676c-1;rank=1 Chromosome ena CDS 775586 778480 . - 0 ID=CDS:Rv0676c;Parent=transcript:Rv0676c;protein_id=Rv0676c ### -Chromosome ena gene 778477 778905 . - . ID=gene:Rv0677c;Name=mmpS5;biotype=protein_coding;description=Possible conserved membrane protein MmpS5;gene_id=Rv0677c;logic_name=ena +Chromosome ena gene 778477 778905 . - . ID=gene:Rv0677c;Name=mmpS5;biotype=protein_coding;description=Possible conserved membrane protein MmpS5;gene_id=Rv0677c;logic_name=ena Chromosome ena mRNA 778477 778905 . - . ID=transcript:Rv0677c;Parent=gene:Rv0677c;Name=mmpS5-1;biotype=protein_coding;transcript_id=Rv0677c Chromosome ena exon 778477 778905 . - . Parent=transcript:Rv0677c;Name=Rv0677c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0677c-1;rank=1 Chromosome ena CDS 778477 778905 . - 0 ID=CDS:Rv0677c;Parent=transcript:Rv0677c;protein_id=Rv0677c ### -Chromosome ena gene 778990 779487 . + . ID=gene:Rv0678;Name=mmpR5;biotype=protein_coding;description=Conserved protein;gene_id=Rv0678;logic_name=ena +Chromosome ena gene 778990 779487 . + . ID=gene:Rv0678;Name=mmpR5;biotype=protein_coding;description=Conserved protein;gene_id=Rv0678;logic_name=ena Chromosome ena mRNA 778990 779487 . + . ID=transcript:Rv0678;Parent=gene:Rv0678;Name=mmpR5-1;biotype=protein_coding;transcript_id=Rv0678 Chromosome ena exon 778990 779487 . + . Parent=transcript:Rv0678;Name=Rv0678-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0678-1;rank=1 Chromosome ena CDS 778990 779487 . + 0 ID=CDS:Rv0678;Parent=transcript:Rv0678;protein_id=Rv0678 ### -Chromosome ena gene 779543 780040 . - . ID=gene:Rv0679c;biotype=protein_coding;description=Conserved threonine rich protein;gene_id=Rv0679c;logic_name=ena +Chromosome ena gene 779543 780040 . - . ID=gene:Rv0679c;biotype=protein_coding;description=Conserved threonine rich protein;gene_id=Rv0679c;logic_name=ena Chromosome ena mRNA 779543 780040 . - . ID=transcript:Rv0679c;Parent=gene:Rv0679c;biotype=protein_coding;transcript_id=Rv0679c Chromosome ena exon 779543 780040 . - . Parent=transcript:Rv0679c;Name=Rv0679c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0679c-1;rank=1 Chromosome ena CDS 779543 780040 . - 0 ID=CDS:Rv0679c;Parent=transcript:Rv0679c;protein_id=Rv0679c ### -Chromosome ena gene 780042 780416 . - . ID=gene:Rv0680c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0680c;logic_name=ena +Chromosome ena gene 780042 780416 . - . ID=gene:Rv0680c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0680c;logic_name=ena Chromosome ena mRNA 780042 780416 . - . ID=transcript:Rv0680c;Parent=gene:Rv0680c;biotype=protein_coding;transcript_id=Rv0680c Chromosome ena exon 780042 780416 . - . Parent=transcript:Rv0680c;Name=Rv0680c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0680c-1;rank=1 Chromosome ena CDS 780042 780416 . - 0 ID=CDS:Rv0680c;Parent=transcript:Rv0680c;protein_id=Rv0680c ### -Chromosome ena gene 780721 781311 . + . ID=gene:Rv0681;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0681;logic_name=ena +Chromosome ena gene 780721 781311 . + . ID=gene:Rv0681;biotype=protein_coding;description=Probable transcriptional regulatory protein (possibly TetR-family);gene_id=Rv0681;logic_name=ena Chromosome ena mRNA 780721 781311 . + . ID=transcript:Rv0681;Parent=gene:Rv0681;biotype=protein_coding;transcript_id=Rv0681 Chromosome ena exon 780721 781311 . + . Parent=transcript:Rv0681;Name=Rv0681-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0681-1;rank=1 Chromosome ena CDS 780721 781311 . + 0 ID=CDS:Rv0681;Parent=transcript:Rv0681;protein_id=Rv0681 ### -Chromosome ena gene 781560 781934 . + . ID=gene:Rv0682;Name=rpsL;biotype=protein_coding;description=30S ribosomal protein S12 RpsL;gene_id=Rv0682;logic_name=ena +Chromosome ena gene 781560 781934 . + . ID=gene:Rv0682;Name=rpsL;biotype=protein_coding;description=30S ribosomal protein S12 RpsL;gene_id=Rv0682;logic_name=ena Chromosome ena mRNA 781560 781934 . + . ID=transcript:Rv0682;Parent=gene:Rv0682;Name=rpsL-1;biotype=protein_coding;transcript_id=Rv0682 Chromosome ena exon 781560 781934 . + . Parent=transcript:Rv0682;Name=Rv0682-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0682-1;rank=1 Chromosome ena CDS 781560 781934 . + 0 ID=CDS:Rv0682;Parent=transcript:Rv0682;protein_id=Rv0682 ### -Chromosome ena gene 781934 782404 . + . ID=gene:Rv0683;Name=rpsG;biotype=protein_coding;description=30S ribosomal protein S7 RpsG;gene_id=Rv0683;logic_name=ena +Chromosome ena gene 781934 782404 . + . ID=gene:Rv0683;Name=rpsG;biotype=protein_coding;description=30S ribosomal protein S7 RpsG;gene_id=Rv0683;logic_name=ena Chromosome ena mRNA 781934 782404 . + . ID=transcript:Rv0683;Parent=gene:Rv0683;Name=rpsG-1;biotype=protein_coding;transcript_id=Rv0683 Chromosome ena exon 781934 782404 . + . Parent=transcript:Rv0683;Name=Rv0683-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0683-1;rank=1 Chromosome ena CDS 781934 782404 . + 0 ID=CDS:Rv0683;Parent=transcript:Rv0683;protein_id=Rv0683 ### -Chromosome ena gene 782485 784590 . + . ID=gene:Rv0684;Name=fusA1;biotype=protein_coding;description=Probable elongation factor G FusA1 (EF-G);gene_id=Rv0684;logic_name=ena +Chromosome ena gene 782485 784590 . + . ID=gene:Rv0684;Name=fusA1;biotype=protein_coding;description=Probable elongation factor G FusA1 (EF-G);gene_id=Rv0684;logic_name=ena Chromosome ena mRNA 782485 784590 . + . ID=transcript:Rv0684;Parent=gene:Rv0684;Name=fusA1-1;biotype=protein_coding;transcript_id=Rv0684 Chromosome ena exon 782485 784590 . + . Parent=transcript:Rv0684;Name=Rv0684-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0684-1;rank=1 Chromosome ena CDS 782485 784590 . + 0 ID=CDS:Rv0684;Parent=transcript:Rv0684;protein_id=Rv0684 ### -Chromosome ena gene 784821 786011 . + . ID=gene:Rv0685;Name=tuf;biotype=protein_coding;description=Probable iron-regulated elongation factor TU Tuf (EF-TU);gene_id=Rv0685;logic_name=ena +Chromosome ena gene 784821 786011 . + . ID=gene:Rv0685;Name=tuf;biotype=protein_coding;description=Probable iron-regulated elongation factor TU Tuf (EF-TU);gene_id=Rv0685;logic_name=ena Chromosome ena mRNA 784821 786011 . + . ID=transcript:Rv0685;Parent=gene:Rv0685;Name=tuf-1;biotype=protein_coding;transcript_id=Rv0685 Chromosome ena exon 784821 786011 . + . Parent=transcript:Rv0685;Name=Rv0685-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0685-1;rank=1 Chromosome ena CDS 784821 786011 . + 0 ID=CDS:Rv0685;Parent=transcript:Rv0685;protein_id=Rv0685 ### -Chromosome ena gene 786149 786946 . + . ID=gene:Rv0686;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv0686;logic_name=ena +Chromosome ena gene 786149 786946 . + . ID=gene:Rv0686;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv0686;logic_name=ena Chromosome ena mRNA 786149 786946 . + . ID=transcript:Rv0686;Parent=gene:Rv0686;biotype=protein_coding;transcript_id=Rv0686 Chromosome ena exon 786149 786946 . + . Parent=transcript:Rv0686;Name=Rv0686-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0686-1;rank=1 Chromosome ena CDS 786149 786946 . + 0 ID=CDS:Rv0686;Parent=transcript:Rv0686;protein_id=Rv0686 ### -Chromosome ena gene 787099 787926 . + . ID=gene:Rv0687;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0687;logic_name=ena +Chromosome ena gene 787099 787926 . + . ID=gene:Rv0687;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0687;logic_name=ena Chromosome ena mRNA 787099 787926 . + . ID=transcript:Rv0687;Parent=gene:Rv0687;biotype=protein_coding;transcript_id=Rv0687 Chromosome ena exon 787099 787926 . + . Parent=transcript:Rv0687;Name=Rv0687-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0687-1;rank=1 Chromosome ena CDS 787099 787926 . + 0 ID=CDS:Rv0687;Parent=transcript:Rv0687;protein_id=Rv0687 ### -Chromosome ena gene 787940 789160 . + . ID=gene:Rv0688;biotype=protein_coding;description=Putative ferredoxin reductase;gene_id=Rv0688;logic_name=ena +Chromosome ena gene 787940 789160 . + . ID=gene:Rv0688;biotype=protein_coding;description=Putative ferredoxin reductase;gene_id=Rv0688;logic_name=ena Chromosome ena mRNA 787940 789160 . + . ID=transcript:Rv0688;Parent=gene:Rv0688;biotype=protein_coding;transcript_id=Rv0688 Chromosome ena exon 787940 789160 . + . Parent=transcript:Rv0688;Name=Rv0688-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0688-1;rank=1 Chromosome ena CDS 787940 789160 . + 0 ID=CDS:Rv0688;Parent=transcript:Rv0688;protein_id=Rv0688 ### -Chromosome ena gene 789157 789411 . - . ID=gene:Rv0689c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0689c;logic_name=ena +Chromosome ena gene 789157 789411 . - . ID=gene:Rv0689c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0689c;logic_name=ena Chromosome ena mRNA 789157 789411 . - . ID=transcript:Rv0689c;Parent=gene:Rv0689c;biotype=protein_coding;transcript_id=Rv0689c Chromosome ena exon 789157 789411 . - . Parent=transcript:Rv0689c;Name=Rv0689c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0689c-1;rank=1 Chromosome ena CDS 789157 789411 . - 0 ID=CDS:Rv0689c;Parent=transcript:Rv0689c;protein_id=Rv0689c ### -Chromosome ena gene 790024 791073 . - . ID=gene:Rv0690c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0690c;logic_name=ena +Chromosome ena gene 790024 791073 . - . ID=gene:Rv0690c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0690c;logic_name=ena Chromosome ena mRNA 790024 791073 . - . ID=transcript:Rv0690c;Parent=gene:Rv0690c;biotype=protein_coding;transcript_id=Rv0690c Chromosome ena exon 790024 791073 . - . Parent=transcript:Rv0690c;Name=Rv0690c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0690c-1;rank=1 Chromosome ena CDS 790024 791073 . - 0 ID=CDS:Rv0690c;Parent=transcript:Rv0690c;protein_id=Rv0690c ### -Chromosome ena gene 791070 791666 . - . ID=gene:Rv0691c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0691c;logic_name=ena +Chromosome ena gene 791070 791666 . - . ID=gene:Rv0691c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv0691c;logic_name=ena Chromosome ena mRNA 791070 791666 . - . ID=transcript:Rv0691c;Parent=gene:Rv0691c;biotype=protein_coding;transcript_id=Rv0691c Chromosome ena exon 791070 791666 . - . Parent=transcript:Rv0691c;Name=Rv0691c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0691c-1;rank=1 Chromosome ena CDS 791070 791666 . - 0 ID=CDS:Rv0691c;Parent=transcript:Rv0691c;protein_id=Rv0691c ### -Chromosome ena gene 791658 791846 . + . ID=gene:Rv0691A;biotype=protein_coding;description=Mycofactocin precursor protein;gene_id=Rv0691A;logic_name=ena +Chromosome ena gene 791658 791846 . + . ID=gene:Rv0691A;biotype=protein_coding;description=Mycofactocin precursor protein;gene_id=Rv0691A;logic_name=ena Chromosome ena mRNA 791658 791846 . + . ID=transcript:Rv0691A;Parent=gene:Rv0691A;biotype=protein_coding;transcript_id=Rv0691A Chromosome ena exon 791658 791846 . + . Parent=transcript:Rv0691A;Name=Rv0691A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0691A-1;rank=1 Chromosome ena CDS 791658 791846 . + 0 ID=CDS:Rv0691A;Parent=transcript:Rv0691A;protein_id=Rv0691A ### -Chromosome ena gene 791831 792160 . + . ID=gene:Rv0692;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0692;logic_name=ena +Chromosome ena gene 791831 792160 . + . ID=gene:Rv0692;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0692;logic_name=ena Chromosome ena mRNA 791831 792160 . + . ID=transcript:Rv0692;Parent=gene:Rv0692;biotype=protein_coding;transcript_id=Rv0692 Chromosome ena exon 791831 792160 . + . Parent=transcript:Rv0692;Name=Rv0692-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0692-1;rank=1 Chromosome ena CDS 791831 792160 . + 0 ID=CDS:Rv0692;Parent=transcript:Rv0692;protein_id=Rv0692 ### -Chromosome ena gene 792157 793332 . + . ID=gene:Rv0693;Name=pqqE;biotype=protein_coding;description=Probable coenzyme PQQ synthesis protein E PqqE (coenzyme PQQ synthesis protein III);gene_id=Rv0693;logic_name=ena +Chromosome ena gene 792157 793332 . + . ID=gene:Rv0693;Name=pqqE;biotype=protein_coding;description=Probable coenzyme PQQ synthesis protein E PqqE (coenzyme PQQ synthesis protein III);gene_id=Rv0693;logic_name=ena Chromosome ena mRNA 792157 793332 . + . ID=transcript:Rv0693;Parent=gene:Rv0693;Name=pqqE-1;biotype=protein_coding;transcript_id=Rv0693 Chromosome ena exon 792157 793332 . + . Parent=transcript:Rv0693;Name=Rv0693-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0693-1;rank=1 Chromosome ena CDS 792157 793332 . + 0 ID=CDS:Rv0693;Parent=transcript:Rv0693;protein_id=Rv0693 ### -Chromosome ena gene 793335 794525 . + . ID=gene:Rv0694;Name=lldD1;biotype=protein_coding;description=Possible L-lactate dehydrogenase (cytochrome) LldD1;gene_id=Rv0694;logic_name=ena +Chromosome ena gene 793335 794525 . + . ID=gene:Rv0694;Name=lldD1;biotype=protein_coding;description=Possible L-lactate dehydrogenase (cytochrome) LldD1;gene_id=Rv0694;logic_name=ena Chromosome ena mRNA 793335 794525 . + . ID=transcript:Rv0694;Parent=gene:Rv0694;Name=lldD1-1;biotype=protein_coding;transcript_id=Rv0694 Chromosome ena exon 793335 794525 . + . Parent=transcript:Rv0694;Name=Rv0694-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0694-1;rank=1 Chromosome ena CDS 793335 794525 . + 0 ID=CDS:Rv0694;Parent=transcript:Rv0694;protein_id=Rv0694 ### -Chromosome ena gene 794715 795470 . + . ID=gene:Rv0695;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0695;logic_name=ena +Chromosome ena gene 794715 795470 . + . ID=gene:Rv0695;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0695;logic_name=ena Chromosome ena mRNA 794715 795470 . + . ID=transcript:Rv0695;Parent=gene:Rv0695;biotype=protein_coding;transcript_id=Rv0695 Chromosome ena exon 794715 795470 . + . Parent=transcript:Rv0695;Name=Rv0695-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0695-1;rank=1 Chromosome ena CDS 794715 795470 . + 0 ID=CDS:Rv0695;Parent=transcript:Rv0695;protein_id=Rv0695 ### -Chromosome ena gene 795519 796931 . + . ID=gene:Rv0696;biotype=protein_coding;description=Probable membrane sugar transferase;gene_id=Rv0696;logic_name=ena +Chromosome ena gene 795519 796931 . + . ID=gene:Rv0696;biotype=protein_coding;description=Probable membrane sugar transferase;gene_id=Rv0696;logic_name=ena Chromosome ena mRNA 795519 796931 . + . ID=transcript:Rv0696;Parent=gene:Rv0696;biotype=protein_coding;transcript_id=Rv0696 Chromosome ena exon 795519 796931 . + . Parent=transcript:Rv0696;Name=Rv0696-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0696-1;rank=1 Chromosome ena CDS 795519 796931 . + 0 ID=CDS:Rv0696;Parent=transcript:Rv0696;protein_id=Rv0696 ### -Chromosome ena gene 796933 798372 . + . ID=gene:Rv0697;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv0697;logic_name=ena +Chromosome ena gene 796933 798372 . + . ID=gene:Rv0697;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv0697;logic_name=ena Chromosome ena mRNA 796933 798372 . + . ID=transcript:Rv0697;Parent=gene:Rv0697;biotype=protein_coding;transcript_id=Rv0697 Chromosome ena exon 796933 798372 . + . Parent=transcript:Rv0697;Name=Rv0697-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0697-1;rank=1 Chromosome ena CDS 796933 798372 . + 0 ID=CDS:Rv0697;Parent=transcript:Rv0697;protein_id=Rv0697 ### -Chromosome ena gene 798833 799444 . + . ID=gene:Rv0698;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0698;logic_name=ena +Chromosome ena gene 798833 799444 . + . ID=gene:Rv0698;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0698;logic_name=ena Chromosome ena mRNA 798833 799444 . + . ID=transcript:Rv0698;Parent=gene:Rv0698;biotype=protein_coding;transcript_id=Rv0698 Chromosome ena exon 798833 799444 . + . Parent=transcript:Rv0698;Name=Rv0698-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0698-1;rank=1 Chromosome ena CDS 798833 799444 . + 0 ID=CDS:Rv0698;Parent=transcript:Rv0698;protein_id=Rv0698 ### -Chromosome ena gene 799629 799850 . + . ID=gene:Rv0699;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0699;logic_name=ena +Chromosome ena gene 799629 799850 . + . ID=gene:Rv0699;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0699;logic_name=ena Chromosome ena mRNA 799629 799850 . + . ID=transcript:Rv0699;Parent=gene:Rv0699;biotype=protein_coding;transcript_id=Rv0699 Chromosome ena exon 799629 799850 . + . Parent=transcript:Rv0699;Name=Rv0699-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0699-1;rank=1 Chromosome ena CDS 799629 799850 . + 0 ID=CDS:Rv0699;Parent=transcript:Rv0699;protein_id=Rv0699 ### -Chromosome ena gene 800487 800792 . + . ID=gene:Rv0700;Name=rpsJ;biotype=protein_coding;description=30S ribosomal protein S10 RpsJ (transcription antitermination factor NusE);gene_id=Rv0700;logic_name=ena +Chromosome ena gene 800487 800792 . + . ID=gene:Rv0700;Name=rpsJ;biotype=protein_coding;description=30S ribosomal protein S10 RpsJ (transcription antitermination factor NusE);gene_id=Rv0700;logic_name=ena Chromosome ena mRNA 800487 800792 . + . ID=transcript:Rv0700;Parent=gene:Rv0700;Name=rpsJ-1;biotype=protein_coding;transcript_id=Rv0700 Chromosome ena exon 800487 800792 . + . Parent=transcript:Rv0700;Name=Rv0700-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0700-1;rank=1 Chromosome ena CDS 800487 800792 . + 0 ID=CDS:Rv0700;Parent=transcript:Rv0700;protein_id=Rv0700 ### -Chromosome ena gene 800809 801462 . + . ID=gene:Rv0701;Name=rplC;biotype=protein_coding;description=50S ribosomal protein L3 RplC;gene_id=Rv0701;logic_name=ena +Chromosome ena gene 800809 801462 . + . ID=gene:Rv0701;Name=rplC;biotype=protein_coding;description=50S ribosomal protein L3 RplC;gene_id=Rv0701;logic_name=ena Chromosome ena mRNA 800809 801462 . + . ID=transcript:Rv0701;Parent=gene:Rv0701;Name=rplC-1;biotype=protein_coding;transcript_id=Rv0701 Chromosome ena exon 800809 801462 . + . Parent=transcript:Rv0701;Name=Rv0701-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0701-1;rank=1 Chromosome ena CDS 800809 801462 . + 0 ID=CDS:Rv0701;Parent=transcript:Rv0701;protein_id=Rv0701 ### -Chromosome ena gene 801462 802133 . + . ID=gene:Rv0702;Name=rplD;biotype=protein_coding;description=50S ribosomal protein L4 RplD;gene_id=Rv0702;logic_name=ena +Chromosome ena gene 801462 802133 . + . ID=gene:Rv0702;Name=rplD;biotype=protein_coding;description=50S ribosomal protein L4 RplD;gene_id=Rv0702;logic_name=ena Chromosome ena mRNA 801462 802133 . + . ID=transcript:Rv0702;Parent=gene:Rv0702;Name=rplD-1;biotype=protein_coding;transcript_id=Rv0702 Chromosome ena exon 801462 802133 . + . Parent=transcript:Rv0702;Name=Rv0702-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0702-1;rank=1 Chromosome ena CDS 801462 802133 . + 0 ID=CDS:Rv0702;Parent=transcript:Rv0702;protein_id=Rv0702 ### -Chromosome ena gene 802133 802435 . + . ID=gene:Rv0703;Name=rplW;biotype=protein_coding;description=50S ribosomal protein L23 RplW;gene_id=Rv0703;logic_name=ena +Chromosome ena gene 802133 802435 . + . ID=gene:Rv0703;Name=rplW;biotype=protein_coding;description=50S ribosomal protein L23 RplW;gene_id=Rv0703;logic_name=ena Chromosome ena mRNA 802133 802435 . + . ID=transcript:Rv0703;Parent=gene:Rv0703;Name=rplW-1;biotype=protein_coding;transcript_id=Rv0703 Chromosome ena exon 802133 802435 . + . Parent=transcript:Rv0703;Name=Rv0703-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0703-1;rank=1 Chromosome ena CDS 802133 802435 . + 0 ID=CDS:Rv0703;Parent=transcript:Rv0703;protein_id=Rv0703 ### -Chromosome ena gene 802528 803370 . + . ID=gene:Rv0704;Name=rplB;biotype=protein_coding;description=50S ribosomal protein L2 RplB;gene_id=Rv0704;logic_name=ena +Chromosome ena gene 802528 803370 . + . ID=gene:Rv0704;Name=rplB;biotype=protein_coding;description=50S ribosomal protein L2 RplB;gene_id=Rv0704;logic_name=ena Chromosome ena mRNA 802528 803370 . + . ID=transcript:Rv0704;Parent=gene:Rv0704;Name=rplB-1;biotype=protein_coding;transcript_id=Rv0704 Chromosome ena exon 802528 803370 . + . Parent=transcript:Rv0704;Name=Rv0704-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0704-1;rank=1 Chromosome ena CDS 802528 803370 . + 0 ID=CDS:Rv0704;Parent=transcript:Rv0704;protein_id=Rv0704 ### -Chromosome ena gene 803411 803692 . + . ID=gene:Rv0705;Name=rpsS;biotype=protein_coding;description=30S ribosomal protein S19 RpsS;gene_id=Rv0705;logic_name=ena +Chromosome ena gene 803411 803692 . + . ID=gene:Rv0705;Name=rpsS;biotype=protein_coding;description=30S ribosomal protein S19 RpsS;gene_id=Rv0705;logic_name=ena Chromosome ena mRNA 803411 803692 . + . ID=transcript:Rv0705;Parent=gene:Rv0705;Name=rpsS-1;biotype=protein_coding;transcript_id=Rv0705 Chromosome ena exon 803411 803692 . + . Parent=transcript:Rv0705;Name=Rv0705-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0705-1;rank=1 Chromosome ena CDS 803411 803692 . + 0 ID=CDS:Rv0705;Parent=transcript:Rv0705;protein_id=Rv0705 ### -Chromosome ena gene 803689 804282 . + . ID=gene:Rv0706;Name=rplV;biotype=protein_coding;description=50S ribosomal protein L22 RplV;gene_id=Rv0706;logic_name=ena +Chromosome ena gene 803689 804282 . + . ID=gene:Rv0706;Name=rplV;biotype=protein_coding;description=50S ribosomal protein L22 RplV;gene_id=Rv0706;logic_name=ena Chromosome ena mRNA 803689 804282 . + . ID=transcript:Rv0706;Parent=gene:Rv0706;Name=rplV-1;biotype=protein_coding;transcript_id=Rv0706 Chromosome ena exon 803689 804282 . + . Parent=transcript:Rv0706;Name=Rv0706-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0706-1;rank=1 Chromosome ena CDS 803689 804282 . + 0 ID=CDS:Rv0706;Parent=transcript:Rv0706;protein_id=Rv0706 ### -Chromosome ena gene 804282 805106 . + . ID=gene:Rv0707;Name=rpsC;biotype=protein_coding;description=30S ribosomal protein S3 RpsC;gene_id=Rv0707;logic_name=ena +Chromosome ena gene 804282 805106 . + . ID=gene:Rv0707;Name=rpsC;biotype=protein_coding;description=30S ribosomal protein S3 RpsC;gene_id=Rv0707;logic_name=ena Chromosome ena mRNA 804282 805106 . + . ID=transcript:Rv0707;Parent=gene:Rv0707;Name=rpsC-1;biotype=protein_coding;transcript_id=Rv0707 Chromosome ena exon 804282 805106 . + . Parent=transcript:Rv0707;Name=Rv0707-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0707-1;rank=1 Chromosome ena CDS 804282 805106 . + 0 ID=CDS:Rv0707;Parent=transcript:Rv0707;protein_id=Rv0707 ### -Chromosome ena gene 805110 805526 . + . ID=gene:Rv0708;Name=rplP;biotype=protein_coding;description=50S ribosomal protein L16 RplP;gene_id=Rv0708;logic_name=ena +Chromosome ena gene 805110 805526 . + . ID=gene:Rv0708;Name=rplP;biotype=protein_coding;description=50S ribosomal protein L16 RplP;gene_id=Rv0708;logic_name=ena Chromosome ena mRNA 805110 805526 . + . ID=transcript:Rv0708;Parent=gene:Rv0708;Name=rplP-1;biotype=protein_coding;transcript_id=Rv0708 Chromosome ena exon 805110 805526 . + . Parent=transcript:Rv0708;Name=Rv0708-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0708-1;rank=1 Chromosome ena CDS 805110 805526 . + 0 ID=CDS:Rv0708;Parent=transcript:Rv0708;protein_id=Rv0708 ### -Chromosome ena gene 805526 805759 . + . ID=gene:Rv0709;Name=rpmC;biotype=protein_coding;description=50S ribosomal protein L29 RpmC;gene_id=Rv0709;logic_name=ena +Chromosome ena gene 805526 805759 . + . ID=gene:Rv0709;Name=rpmC;biotype=protein_coding;description=50S ribosomal protein L29 RpmC;gene_id=Rv0709;logic_name=ena Chromosome ena mRNA 805526 805759 . + . ID=transcript:Rv0709;Parent=gene:Rv0709;Name=rpmC-1;biotype=protein_coding;transcript_id=Rv0709 Chromosome ena exon 805526 805759 . + . Parent=transcript:Rv0709;Name=Rv0709-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0709-1;rank=1 Chromosome ena CDS 805526 805759 . + 0 ID=CDS:Rv0709;Parent=transcript:Rv0709;protein_id=Rv0709 ### -Chromosome ena gene 805756 806166 . + . ID=gene:Rv0710;Name=rpsQ;biotype=protein_coding;description=30S ribosomal protein S17 RpsQ;gene_id=Rv0710;logic_name=ena +Chromosome ena gene 805756 806166 . + . ID=gene:Rv0710;Name=rpsQ;biotype=protein_coding;description=30S ribosomal protein S17 RpsQ;gene_id=Rv0710;logic_name=ena Chromosome ena mRNA 805756 806166 . + . ID=transcript:Rv0710;Parent=gene:Rv0710;Name=rpsQ-1;biotype=protein_coding;transcript_id=Rv0710 Chromosome ena exon 805756 806166 . + . Parent=transcript:Rv0710;Name=Rv0710-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0710-1;rank=1 Chromosome ena CDS 805756 806166 . + 0 ID=CDS:Rv0710;Parent=transcript:Rv0710;protein_id=Rv0710 ### -Chromosome ena gene 806335 808698 . + . ID=gene:Rv0711;Name=atsA;biotype=protein_coding;description=Possible arylsulfatase AtsA (aryl-sulfate sulphohydrolase) (arylsulphatase);gene_id=Rv0711;logic_name=ena +Chromosome ena gene 806335 808698 . + . ID=gene:Rv0711;Name=atsA;biotype=protein_coding;description=Possible arylsulfatase AtsA (aryl-sulfate sulphohydrolase) (arylsulphatase);gene_id=Rv0711;logic_name=ena Chromosome ena mRNA 806335 808698 . + . ID=transcript:Rv0711;Parent=gene:Rv0711;Name=atsA-1;biotype=protein_coding;transcript_id=Rv0711 Chromosome ena exon 806335 808698 . + . Parent=transcript:Rv0711;Name=Rv0711-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0711-1;rank=1 Chromosome ena CDS 806335 808698 . + 0 ID=CDS:Rv0711;Parent=transcript:Rv0711;protein_id=Rv0711 ### -Chromosome ena gene 808746 809645 . + . ID=gene:Rv0712;biotype=protein_coding;description=Conserved protein;gene_id=Rv0712;logic_name=ena +Chromosome ena gene 808746 809645 . + . ID=gene:Rv0712;biotype=protein_coding;description=Conserved protein;gene_id=Rv0712;logic_name=ena Chromosome ena mRNA 808746 809645 . + . ID=transcript:Rv0712;Parent=gene:Rv0712;biotype=protein_coding;transcript_id=Rv0712 Chromosome ena exon 808746 809645 . + . Parent=transcript:Rv0712;Name=Rv0712-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0712-1;rank=1 Chromosome ena CDS 808746 809645 . + 0 ID=CDS:Rv0712;Parent=transcript:Rv0712;protein_id=Rv0712 ### -Chromosome ena gene 809946 810887 . + . ID=gene:Rv0713;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0713;logic_name=ena +Chromosome ena gene 809946 810887 . + . ID=gene:Rv0713;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0713;logic_name=ena Chromosome ena mRNA 809946 810887 . + . ID=transcript:Rv0713;Parent=gene:Rv0713;biotype=protein_coding;transcript_id=Rv0713 Chromosome ena exon 809946 810887 . + . Parent=transcript:Rv0713;Name=Rv0713-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0713-1;rank=1 Chromosome ena CDS 809946 810887 . + 0 ID=CDS:Rv0713;Parent=transcript:Rv0713;protein_id=Rv0713 ### -Chromosome ena gene 811373 811741 . + . ID=gene:Rv0714;Name=rplN;biotype=protein_coding;description=50S ribosomal protein L14 RplN;gene_id=Rv0714;logic_name=ena +Chromosome ena gene 811373 811741 . + . ID=gene:Rv0714;Name=rplN;biotype=protein_coding;description=50S ribosomal protein L14 RplN;gene_id=Rv0714;logic_name=ena Chromosome ena mRNA 811373 811741 . + . ID=transcript:Rv0714;Parent=gene:Rv0714;Name=rplN-1;biotype=protein_coding;transcript_id=Rv0714 Chromosome ena exon 811373 811741 . + . Parent=transcript:Rv0714;Name=Rv0714-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0714-1;rank=1 Chromosome ena CDS 811373 811741 . + 0 ID=CDS:Rv0714;Parent=transcript:Rv0714;protein_id=Rv0714 ### -Chromosome ena gene 811742 812059 . + . ID=gene:Rv0715;Name=rplX;biotype=protein_coding;description=50S ribosomal protein L24 RplX;gene_id=Rv0715;logic_name=ena +Chromosome ena gene 811742 812059 . + . ID=gene:Rv0715;Name=rplX;biotype=protein_coding;description=50S ribosomal protein L24 RplX;gene_id=Rv0715;logic_name=ena Chromosome ena mRNA 811742 812059 . + . ID=transcript:Rv0715;Parent=gene:Rv0715;Name=rplX-1;biotype=protein_coding;transcript_id=Rv0715 Chromosome ena exon 811742 812059 . + . Parent=transcript:Rv0715;Name=Rv0715-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0715-1;rank=1 Chromosome ena CDS 811742 812059 . + 0 ID=CDS:Rv0715;Parent=transcript:Rv0715;protein_id=Rv0715 ### -Chromosome ena gene 812059 812622 . + . ID=gene:Rv0716;Name=rplE;biotype=protein_coding;description=50S ribosomal protein L5 RplE;gene_id=Rv0716;logic_name=ena +Chromosome ena gene 812059 812622 . + . ID=gene:Rv0716;Name=rplE;biotype=protein_coding;description=50S ribosomal protein L5 RplE;gene_id=Rv0716;logic_name=ena Chromosome ena mRNA 812059 812622 . + . ID=transcript:Rv0716;Parent=gene:Rv0716;Name=rplE-1;biotype=protein_coding;transcript_id=Rv0716 Chromosome ena exon 812059 812622 . + . Parent=transcript:Rv0716;Name=Rv0716-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0716-1;rank=1 Chromosome ena CDS 812059 812622 . + 0 ID=CDS:Rv0716;Parent=transcript:Rv0716;protein_id=Rv0716 ### -Chromosome ena gene 812627 812812 . + . ID=gene:Rv0717;Name=rpsN1;biotype=protein_coding;description=30S ribosomal protein S14 RpsN1;gene_id=Rv0717;logic_name=ena +Chromosome ena gene 812627 812812 . + . ID=gene:Rv0717;Name=rpsN1;biotype=protein_coding;description=30S ribosomal protein S14 RpsN1;gene_id=Rv0717;logic_name=ena Chromosome ena mRNA 812627 812812 . + . ID=transcript:Rv0717;Parent=gene:Rv0717;Name=rpsN1-1;biotype=protein_coding;transcript_id=Rv0717 Chromosome ena exon 812627 812812 . + . Parent=transcript:Rv0717;Name=Rv0717-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0717-1;rank=1 Chromosome ena CDS 812627 812812 . + 0 ID=CDS:Rv0717;Parent=transcript:Rv0717;protein_id=Rv0717 ### -Chromosome ena gene 812976 813374 . + . ID=gene:Rv0718;Name=rpsH;biotype=protein_coding;description=30S ribosomal protein S8 RpsH;gene_id=Rv0718;logic_name=ena +Chromosome ena gene 812976 813374 . + . ID=gene:Rv0718;Name=rpsH;biotype=protein_coding;description=30S ribosomal protein S8 RpsH;gene_id=Rv0718;logic_name=ena Chromosome ena mRNA 812976 813374 . + . ID=transcript:Rv0718;Parent=gene:Rv0718;Name=rpsH-1;biotype=protein_coding;transcript_id=Rv0718 Chromosome ena exon 812976 813374 . + . Parent=transcript:Rv0718;Name=Rv0718-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0718-1;rank=1 Chromosome ena CDS 812976 813374 . + 0 ID=CDS:Rv0718;Parent=transcript:Rv0718;protein_id=Rv0718 ### -Chromosome ena gene 813398 813937 . + . ID=gene:Rv0719;Name=rplF;biotype=protein_coding;description=50S ribosomal protein L6 RplF;gene_id=Rv0719;logic_name=ena +Chromosome ena gene 813398 813937 . + . ID=gene:Rv0719;Name=rplF;biotype=protein_coding;description=50S ribosomal protein L6 RplF;gene_id=Rv0719;logic_name=ena Chromosome ena mRNA 813398 813937 . + . ID=transcript:Rv0719;Parent=gene:Rv0719;Name=rplF-1;biotype=protein_coding;transcript_id=Rv0719 Chromosome ena exon 813398 813937 . + . Parent=transcript:Rv0719;Name=Rv0719-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0719-1;rank=1 Chromosome ena CDS 813398 813937 . + 0 ID=CDS:Rv0719;Parent=transcript:Rv0719;protein_id=Rv0719 ### -Chromosome ena gene 813940 814308 . + . ID=gene:Rv0720;Name=rplR;biotype=protein_coding;description=50S ribosomal protein L18 RplR;gene_id=Rv0720;logic_name=ena +Chromosome ena gene 813940 814308 . + . ID=gene:Rv0720;Name=rplR;biotype=protein_coding;description=50S ribosomal protein L18 RplR;gene_id=Rv0720;logic_name=ena Chromosome ena mRNA 813940 814308 . + . ID=transcript:Rv0720;Parent=gene:Rv0720;Name=rplR-1;biotype=protein_coding;transcript_id=Rv0720 Chromosome ena exon 813940 814308 . + . Parent=transcript:Rv0720;Name=Rv0720-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0720-1;rank=1 Chromosome ena CDS 813940 814308 . + 0 ID=CDS:Rv0720;Parent=transcript:Rv0720;protein_id=Rv0720 ### -Chromosome ena gene 814328 814990 . + . ID=gene:Rv0721;Name=rpsE;biotype=protein_coding;description=30S ribosomal protein S5 RpsE;gene_id=Rv0721;logic_name=ena +Chromosome ena gene 814328 814990 . + . ID=gene:Rv0721;Name=rpsE;biotype=protein_coding;description=30S ribosomal protein S5 RpsE;gene_id=Rv0721;logic_name=ena Chromosome ena mRNA 814328 814990 . + . ID=transcript:Rv0721;Parent=gene:Rv0721;Name=rpsE-1;biotype=protein_coding;transcript_id=Rv0721 Chromosome ena exon 814328 814990 . + . Parent=transcript:Rv0721;Name=Rv0721-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0721-1;rank=1 Chromosome ena CDS 814328 814990 . + 0 ID=CDS:Rv0721;Parent=transcript:Rv0721;protein_id=Rv0721 ### -Chromosome ena gene 814993 815190 . + . ID=gene:Rv0722;Name=rpmD;biotype=protein_coding;description=50S ribosomal protein L30 RpmD;gene_id=Rv0722;logic_name=ena +Chromosome ena gene 814993 815190 . + . ID=gene:Rv0722;Name=rpmD;biotype=protein_coding;description=50S ribosomal protein L30 RpmD;gene_id=Rv0722;logic_name=ena Chromosome ena mRNA 814993 815190 . + . ID=transcript:Rv0722;Parent=gene:Rv0722;Name=rpmD-1;biotype=protein_coding;transcript_id=Rv0722 Chromosome ena exon 814993 815190 . + . Parent=transcript:Rv0722;Name=Rv0722-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0722-1;rank=1 Chromosome ena CDS 814993 815190 . + 0 ID=CDS:Rv0722;Parent=transcript:Rv0722;protein_id=Rv0722 ### -Chromosome ena gene 815190 815630 . + . ID=gene:Rv0723;Name=rplO;biotype=protein_coding;description=50S ribosomal protein L15 RplO;gene_id=Rv0723;logic_name=ena +Chromosome ena gene 815190 815630 . + . ID=gene:Rv0723;Name=rplO;biotype=protein_coding;description=50S ribosomal protein L15 RplO;gene_id=Rv0723;logic_name=ena Chromosome ena mRNA 815190 815630 . + . ID=transcript:Rv0723;Parent=gene:Rv0723;Name=rplO-1;biotype=protein_coding;transcript_id=Rv0723 Chromosome ena exon 815190 815630 . + . Parent=transcript:Rv0723;Name=Rv0723-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0723-1;rank=1 Chromosome ena CDS 815190 815630 . + 0 ID=CDS:Rv0723;Parent=transcript:Rv0723;protein_id=Rv0723 ### -Chromosome ena gene 815663 817534 . + . ID=gene:Rv0724;Name=sppA;biotype=protein_coding;description=Possible protease IV SppA (endopeptidase IV) (signal peptide peptidase);gene_id=Rv0724;logic_name=ena +Chromosome ena gene 815663 817534 . + . ID=gene:Rv0724;Name=sppA;biotype=protein_coding;description=Possible protease IV SppA (endopeptidase IV) (signal peptide peptidase);gene_id=Rv0724;logic_name=ena Chromosome ena mRNA 815663 817534 . + . ID=transcript:Rv0724;Parent=gene:Rv0724;Name=sppA-1;biotype=protein_coding;transcript_id=Rv0724 Chromosome ena exon 815663 817534 . + . Parent=transcript:Rv0724;Name=Rv0724-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0724-1;rank=1 Chromosome ena CDS 815663 817534 . + 0 ID=CDS:Rv0724;Parent=transcript:Rv0724;protein_id=Rv0724 ### -Chromosome ena gene 817531 817866 . - . ID=gene:Rv0724A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0724A;logic_name=ena +Chromosome ena gene 817531 817866 . - . ID=gene:Rv0724A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0724A;logic_name=ena Chromosome ena mRNA 817531 817866 . - . ID=transcript:Rv0724A;Parent=gene:Rv0724A;biotype=protein_coding;transcript_id=Rv0724A Chromosome ena exon 817531 817866 . - . Parent=transcript:Rv0724A;Name=Rv0724A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0724A-1;rank=1 Chromosome ena CDS 817531 817866 . - 0 ID=CDS:Rv0724A;Parent=transcript:Rv0724A;protein_id=Rv0724A ### -Chromosome ena gene 817539 818444 . - . ID=gene:Rv0725c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0725c;logic_name=ena +Chromosome ena gene 817539 818444 . - . ID=gene:Rv0725c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0725c;logic_name=ena Chromosome ena mRNA 817539 818444 . - . ID=transcript:Rv0725c;Parent=gene:Rv0725c;biotype=protein_coding;transcript_id=Rv0725c Chromosome ena exon 817539 818444 . - . Parent=transcript:Rv0725c;Name=Rv0725c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0725c-1;rank=1 Chromosome ena CDS 817539 818444 . - 0 ID=CDS:Rv0725c;Parent=transcript:Rv0725c;protein_id=Rv0725c ### -Chromosome ena gene 818537 819640 . - . ID=gene:Rv0726c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0726c;logic_name=ena +Chromosome ena gene 818537 819640 . - . ID=gene:Rv0726c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0726c;logic_name=ena Chromosome ena mRNA 818537 819640 . - . ID=transcript:Rv0726c;Parent=gene:Rv0726c;biotype=protein_coding;transcript_id=Rv0726c Chromosome ena exon 818537 819640 . - . Parent=transcript:Rv0726c;Name=Rv0726c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0726c-1;rank=1 Chromosome ena CDS 818537 819640 . - 0 ID=CDS:Rv0726c;Parent=transcript:Rv0726c;protein_id=Rv0726c ### -Chromosome ena gene 819843 820499 . - . ID=gene:Rv0727c;Name=fucA;biotype=protein_coding;description=Possible L-fuculose phosphate aldolase FucA (L-fuculose-1-phosphate aldolase);gene_id=Rv0727c;logic_name=ena +Chromosome ena gene 819843 820499 . - . ID=gene:Rv0727c;Name=fucA;biotype=protein_coding;description=Possible L-fuculose phosphate aldolase FucA (L-fuculose-1-phosphate aldolase);gene_id=Rv0727c;logic_name=ena Chromosome ena mRNA 819843 820499 . - . ID=transcript:Rv0727c;Parent=gene:Rv0727c;Name=fucA-1;biotype=protein_coding;transcript_id=Rv0727c Chromosome ena exon 819843 820499 . - . Parent=transcript:Rv0727c;Name=Rv0727c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0727c-1;rank=1 Chromosome ena CDS 819843 820499 . - 0 ID=CDS:Rv0727c;Parent=transcript:Rv0727c;protein_id=Rv0727c ### -Chromosome ena gene 820496 821476 . - . ID=gene:Rv0728c;Name=serA2;biotype=protein_coding;description=Possible D-3-phosphoglycerate dehydrogenase SerA2 (phosphoglycerate dehydrogenase) (PGDH);gene_id=Rv0728c;logic_name=ena +Chromosome ena gene 820496 821476 . - . ID=gene:Rv0728c;Name=serA2;biotype=protein_coding;description=Possible D-3-phosphoglycerate dehydrogenase SerA2 (phosphoglycerate dehydrogenase) (PGDH);gene_id=Rv0728c;logic_name=ena Chromosome ena mRNA 820496 821476 . - . ID=transcript:Rv0728c;Parent=gene:Rv0728c;Name=serA2-1;biotype=protein_coding;transcript_id=Rv0728c Chromosome ena exon 820496 821476 . - . Parent=transcript:Rv0728c;Name=Rv0728c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0728c-1;rank=1 Chromosome ena CDS 820496 821476 . - 0 ID=CDS:Rv0728c;Parent=transcript:Rv0728c;protein_id=Rv0728c ### -Chromosome ena gene 821507 822853 . + . ID=gene:Rv0729;Name=xylB;biotype=protein_coding;description=Possible D-xylulose kinase XylB (xylulokinase) (xylulose kinase);gene_id=Rv0729;logic_name=ena +Chromosome ena gene 821507 822853 . + . ID=gene:Rv0729;Name=xylB;biotype=protein_coding;description=Possible D-xylulose kinase XylB (xylulokinase) (xylulose kinase);gene_id=Rv0729;logic_name=ena Chromosome ena mRNA 821507 822853 . + . ID=transcript:Rv0729;Parent=gene:Rv0729;Name=xylB-1;biotype=protein_coding;transcript_id=Rv0729 Chromosome ena exon 821507 822853 . + . Parent=transcript:Rv0729;Name=Rv0729-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0729-1;rank=1 Chromosome ena CDS 821507 822853 . + 0 ID=CDS:Rv0729;Parent=transcript:Rv0729;protein_id=Rv0729 ### -Chromosome ena gene 822866 823594 . + . ID=gene:Rv0730;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0730;logic_name=ena +Chromosome ena gene 822866 823594 . + . ID=gene:Rv0730;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0730;logic_name=ena Chromosome ena mRNA 822866 823594 . + . ID=transcript:Rv0730;Parent=gene:Rv0730;biotype=protein_coding;transcript_id=Rv0730 Chromosome ena exon 822866 823594 . + . Parent=transcript:Rv0730;Name=Rv0730-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0730-1;rank=1 Chromosome ena CDS 822866 823594 . + 0 ID=CDS:Rv0730;Parent=transcript:Rv0730;protein_id=Rv0730 ### -Chromosome ena gene 823683 824639 . - . ID=gene:Rv0731c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0731c;logic_name=ena +Chromosome ena gene 823683 824639 . - . ID=gene:Rv0731c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0731c;logic_name=ena Chromosome ena mRNA 823683 824639 . - . ID=transcript:Rv0731c;Parent=gene:Rv0731c;biotype=protein_coding;transcript_id=Rv0731c Chromosome ena exon 823683 824639 . - . Parent=transcript:Rv0731c;Name=Rv0731c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0731c-1;rank=1 Chromosome ena CDS 823683 824639 . - 0 ID=CDS:Rv0731c;Parent=transcript:Rv0731c;protein_id=Rv0731c ### -Chromosome ena gene 824800 826125 . + . ID=gene:Rv0732;Name=secY;biotype=protein_coding;description=Probable preprotein translocase SecY;gene_id=Rv0732;logic_name=ena +Chromosome ena gene 824800 826125 . + . ID=gene:Rv0732;Name=secY;biotype=protein_coding;description=Probable preprotein translocase SecY;gene_id=Rv0732;logic_name=ena Chromosome ena mRNA 824800 826125 . + . ID=transcript:Rv0732;Parent=gene:Rv0732;Name=secY-1;biotype=protein_coding;transcript_id=Rv0732 Chromosome ena exon 824800 826125 . + . Parent=transcript:Rv0732;Name=Rv0732-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0732-1;rank=1 Chromosome ena CDS 824800 826125 . + 0 ID=CDS:Rv0732;Parent=transcript:Rv0732;protein_id=Rv0732 ### -Chromosome ena gene 826122 826667 . + . ID=gene:Rv0733;Name=adk;biotype=protein_coding;description=Adenylate kinase Adk (ATP-AMP transphosphorylase);gene_id=Rv0733;logic_name=ena +Chromosome ena gene 826122 826667 . + . ID=gene:Rv0733;Name=adk;biotype=protein_coding;description=Adenylate kinase Adk (ATP-AMP transphosphorylase);gene_id=Rv0733;logic_name=ena Chromosome ena mRNA 826122 826667 . + . ID=transcript:Rv0733;Parent=gene:Rv0733;Name=adk-1;biotype=protein_coding;transcript_id=Rv0733 Chromosome ena exon 826122 826667 . + . Parent=transcript:Rv0733;Name=Rv0733-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0733-1;rank=1 Chromosome ena CDS 826122 826667 . + 0 ID=CDS:Rv0733;Parent=transcript:Rv0733;protein_id=Rv0733 ### -Chromosome ena gene 826670 827470 . + . ID=gene:Rv0734;Name=mapA;biotype=protein_coding;description=Methionine aminopeptidase MapA (map) (peptidase M) (MetAP);gene_id=Rv0734;logic_name=ena +Chromosome ena gene 826670 827470 . + . ID=gene:Rv0734;Name=mapA;biotype=protein_coding;description=Methionine aminopeptidase MapA (map) (peptidase M) (MetAP);gene_id=Rv0734;logic_name=ena Chromosome ena mRNA 826670 827470 . + . ID=transcript:Rv0734;Parent=gene:Rv0734;Name=mapA-1;biotype=protein_coding;transcript_id=Rv0734 Chromosome ena exon 826670 827470 . + . Parent=transcript:Rv0734;Name=Rv0734-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0734-1;rank=1 Chromosome ena CDS 826670 827470 . + 0 ID=CDS:Rv0734;Parent=transcript:Rv0734;protein_id=Rv0734 ### -Chromosome ena gene 827543 828076 . + . ID=gene:Rv0735;Name=sigL;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor SigL;gene_id=Rv0735;logic_name=ena +Chromosome ena gene 827543 828076 . + . ID=gene:Rv0735;Name=sigL;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor SigL;gene_id=Rv0735;logic_name=ena Chromosome ena mRNA 827543 828076 . + . ID=transcript:Rv0735;Parent=gene:Rv0735;Name=sigL-1;biotype=protein_coding;transcript_id=Rv0735 Chromosome ena exon 827543 828076 . + . Parent=transcript:Rv0735;Name=Rv0735-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0735-1;rank=1 Chromosome ena CDS 827543 828076 . + 0 ID=CDS:Rv0735;Parent=transcript:Rv0735;protein_id=Rv0735 ### -Chromosome ena gene 828140 828892 . + . ID=gene:Rv0736;Name=rslA;biotype=protein_coding;description=Anti-sigma factor RslA;gene_id=Rv0736;logic_name=ena +Chromosome ena gene 828140 828892 . + . ID=gene:Rv0736;Name=rslA;biotype=protein_coding;description=Anti-sigma factor RslA;gene_id=Rv0736;logic_name=ena Chromosome ena mRNA 828140 828892 . + . ID=transcript:Rv0736;Parent=gene:Rv0736;Name=rslA-1;biotype=protein_coding;transcript_id=Rv0736 Chromosome ena exon 828140 828892 . + . Parent=transcript:Rv0736;Name=Rv0736-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0736-1;rank=1 Chromosome ena CDS 828140 828892 . + 0 ID=CDS:Rv0736;Parent=transcript:Rv0736;protein_id=Rv0736 ### -Chromosome ena gene 829207 829704 . + . ID=gene:Rv0737;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0737;logic_name=ena +Chromosome ena gene 829207 829704 . + . ID=gene:Rv0737;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0737;logic_name=ena Chromosome ena mRNA 829207 829704 . + . ID=transcript:Rv0737;Parent=gene:Rv0737;biotype=protein_coding;transcript_id=Rv0737 Chromosome ena exon 829207 829704 . + . Parent=transcript:Rv0737;Name=Rv0737-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0737-1;rank=1 Chromosome ena CDS 829207 829704 . + 0 ID=CDS:Rv0737;Parent=transcript:Rv0737;protein_id=Rv0737 ### -Chromosome ena gene 830062 830610 . + . ID=gene:Rv0738;biotype=protein_coding;description=Conserved protein;gene_id=Rv0738;logic_name=ena +Chromosome ena gene 830062 830610 . + . ID=gene:Rv0738;biotype=protein_coding;description=Conserved protein;gene_id=Rv0738;logic_name=ena Chromosome ena mRNA 830062 830610 . + . ID=transcript:Rv0738;Parent=gene:Rv0738;biotype=protein_coding;transcript_id=Rv0738 Chromosome ena exon 830062 830610 . + . Parent=transcript:Rv0738;Name=Rv0738-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0738-1;rank=1 Chromosome ena CDS 830062 830610 . + 0 ID=CDS:Rv0738;Parent=transcript:Rv0738;protein_id=Rv0738 ### -Chromosome ena gene 830855 831661 . + . ID=gene:Rv0739;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0739;logic_name=ena +Chromosome ena gene 830855 831661 . + . ID=gene:Rv0739;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0739;logic_name=ena Chromosome ena mRNA 830855 831661 . + . ID=transcript:Rv0739;Parent=gene:Rv0739;biotype=protein_coding;transcript_id=Rv0739 Chromosome ena exon 830855 831661 . + . Parent=transcript:Rv0739;Name=Rv0739-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0739-1;rank=1 Chromosome ena CDS 830855 831661 . + 0 ID=CDS:Rv0739;Parent=transcript:Rv0739;protein_id=Rv0739 ### -Chromosome ena gene 831776 832303 . + . ID=gene:Rv0740;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0740;logic_name=ena +Chromosome ena gene 831776 832303 . + . ID=gene:Rv0740;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0740;logic_name=ena Chromosome ena mRNA 831776 832303 . + . ID=transcript:Rv0740;Parent=gene:Rv0740;biotype=protein_coding;transcript_id=Rv0740 Chromosome ena exon 831776 832303 . + . Parent=transcript:Rv0740;Name=Rv0740-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0740-1;rank=1 Chromosome ena CDS 831776 832303 . + 0 ID=CDS:Rv0740;Parent=transcript:Rv0740;protein_id=Rv0740 ### -Chromosome ena_mobile_element biological_region 832352 832868 . + . external_name=IS1557'-1%2C len: 517 nt. Region similar to Insertion sequence IS1557 on MTCY373- (IS1557- 1st copy). This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 832534 832848 . + . ID=gene:Rv0741;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv0741;logic_name=ena +Chromosome ena_mobile_element biological_region 832352 832868 . + . external_name=IS1557'-1%2C len: 517 nt. Region similar to Insertion sequence IS1557 on MTCY373- (IS1557- 1st copy). This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 832534 832848 . + . ID=gene:Rv0741;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv0741;logic_name=ena Chromosome ena mRNA 832534 832848 . + . ID=transcript:Rv0741;Parent=gene:Rv0741;biotype=protein_coding;transcript_id=Rv0741 Chromosome ena exon 832534 832848 . + . Parent=transcript:Rv0741;Name=Rv0741-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0741-1;rank=1 Chromosome ena CDS 832534 832848 . + 0 ID=CDS:Rv0741;Parent=transcript:Rv0741;protein_id=Rv0741 ### -Chromosome ena gene 832981 833508 . + . ID=gene:Rv0742;Name=PE_PGRS8;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS8;gene_id=Rv0742;logic_name=ena +Chromosome ena gene 832981 833508 . + . ID=gene:Rv0742;Name=PE_PGRS8;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS8;gene_id=Rv0742;logic_name=ena Chromosome ena mRNA 832981 833508 . + . ID=transcript:Rv0742;Parent=gene:Rv0742;Name=PE_PGRS8-1;biotype=protein_coding;transcript_id=Rv0742 Chromosome ena exon 832981 833508 . + . Parent=transcript:Rv0742;Name=Rv0742-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0742-1;rank=1 Chromosome ena CDS 832981 833508 . + 0 ID=CDS:Rv0742;Parent=transcript:Rv0742;protein_id=Rv0742 ### -Chromosome ena gene 833886 834443 . - . ID=gene:Rv0743c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0743c;logic_name=ena +Chromosome ena gene 833886 834443 . - . ID=gene:Rv0743c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0743c;logic_name=ena Chromosome ena mRNA 833886 834443 . - . ID=transcript:Rv0743c;Parent=gene:Rv0743c;biotype=protein_coding;transcript_id=Rv0743c Chromosome ena exon 833886 834443 . - . Parent=transcript:Rv0743c;Name=Rv0743c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0743c-1;rank=1 Chromosome ena CDS 833886 834443 . - 0 ID=CDS:Rv0743c;Parent=transcript:Rv0743c;protein_id=Rv0743c ### -Chromosome ena gene 834440 834946 . - . ID=gene:Rv0744c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0744c;logic_name=ena +Chromosome ena gene 834440 834946 . - . ID=gene:Rv0744c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0744c;logic_name=ena Chromosome ena mRNA 834440 834946 . - . ID=transcript:Rv0744c;Parent=gene:Rv0744c;biotype=protein_coding;transcript_id=Rv0744c Chromosome ena exon 834440 834946 . - . Parent=transcript:Rv0744c;Name=Rv0744c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0744c-1;rank=1 Chromosome ena CDS 834440 834946 . - 0 ID=CDS:Rv0744c;Parent=transcript:Rv0744c;protein_id=Rv0744c ### -Chromosome ena gene 835154 835681 . + . ID=gene:Rv0745;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0745;logic_name=ena +Chromosome ena gene 835154 835681 . + . ID=gene:Rv0745;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0745;logic_name=ena Chromosome ena mRNA 835154 835681 . + . ID=transcript:Rv0745;Parent=gene:Rv0745;biotype=protein_coding;transcript_id=Rv0745 Chromosome ena exon 835154 835681 . + . Parent=transcript:Rv0745;Name=Rv0745-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0745-1;rank=1 Chromosome ena CDS 835154 835681 . + 0 ID=CDS:Rv0745;Parent=transcript:Rv0745;protein_id=Rv0745 ### -Chromosome ena gene 835701 838052 . + . ID=gene:Rv0746;Name=PE_PGRS9;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS9;gene_id=Rv0746;logic_name=ena +Chromosome ena gene 835701 838052 . + . ID=gene:Rv0746;Name=PE_PGRS9;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS9;gene_id=Rv0746;logic_name=ena Chromosome ena mRNA 835701 838052 . + . ID=transcript:Rv0746;Parent=gene:Rv0746;Name=PE_PGRS9-1;biotype=protein_coding;transcript_id=Rv0746 Chromosome ena exon 835701 838052 . + . Parent=transcript:Rv0746;Name=Rv0746-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0746-1;rank=1 Chromosome ena CDS 835701 838052 . + 0 ID=CDS:Rv0746;Parent=transcript:Rv0746;protein_id=Rv0746 ### -Chromosome ena gene 838451 840856 . + . ID=gene:Rv0747;Name=PE_PGRS10;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS10;gene_id=Rv0747;logic_name=ena +Chromosome ena gene 838451 840856 . + . ID=gene:Rv0747;Name=PE_PGRS10;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS10;gene_id=Rv0747;logic_name=ena Chromosome ena mRNA 838451 840856 . + . ID=transcript:Rv0747;Parent=gene:Rv0747;Name=PE_PGRS10-1;biotype=protein_coding;transcript_id=Rv0747 Chromosome ena exon 838451 840856 . + . Parent=transcript:Rv0747;Name=Rv0747-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0747-1;rank=1 Chromosome ena CDS 838451 840856 . + 0 ID=CDS:Rv0747;Parent=transcript:Rv0747;protein_id=Rv0747 ### -Chromosome ena gene 840947 841204 . + . ID=gene:Rv0748;Name=vapB31;biotype=protein_coding;description=Possible antitoxin VapB31;gene_id=Rv0748;logic_name=ena +Chromosome ena gene 840947 841204 . + . ID=gene:Rv0748;Name=vapB31;biotype=protein_coding;description=Possible antitoxin VapB31;gene_id=Rv0748;logic_name=ena Chromosome ena mRNA 840947 841204 . + . ID=transcript:Rv0748;Parent=gene:Rv0748;Name=vapB31-1;biotype=protein_coding;transcript_id=Rv0748 Chromosome ena exon 840947 841204 . + . Parent=transcript:Rv0748;Name=Rv0748-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0748-1;rank=1 Chromosome ena CDS 840947 841204 . + 0 ID=CDS:Rv0748;Parent=transcript:Rv0748;protein_id=Rv0748 ### -Chromosome ena gene 841228 841656 . + . ID=gene:Rv0749;Name=vapC31;biotype=protein_coding;description=Possible toxin VapC31. Contains PIN domain.;gene_id=Rv0749;logic_name=ena +Chromosome ena gene 841228 841656 . + . ID=gene:Rv0749;Name=vapC31;biotype=protein_coding;description=Possible toxin VapC31. Contains PIN domain.;gene_id=Rv0749;logic_name=ena Chromosome ena mRNA 841228 841656 . + . ID=transcript:Rv0749;Parent=gene:Rv0749;Name=vapC31-1;biotype=protein_coding;transcript_id=Rv0749 Chromosome ena exon 841228 841656 . + . Parent=transcript:Rv0749;Name=Rv0749-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0749-1;rank=1 Chromosome ena CDS 841228 841656 . + 0 ID=CDS:Rv0749;Parent=transcript:Rv0749;protein_id=Rv0749 ### -Chromosome ena gene 841737 841874 . - . ID=gene:Rv0749A;biotype=protein_coding;description=Hypothetical protein (fragment);gene_id=Rv0749A;logic_name=ena +Chromosome ena gene 841737 841874 . - . ID=gene:Rv0749A;biotype=protein_coding;description=Hypothetical protein (fragment);gene_id=Rv0749A;logic_name=ena Chromosome ena mRNA 841737 841874 . - . ID=transcript:Rv0749A;Parent=gene:Rv0749A;biotype=protein_coding;transcript_id=Rv0749A Chromosome ena exon 841737 841874 . - . Parent=transcript:Rv0749A;Name=Rv0749A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0749A-1;rank=1 Chromosome ena CDS 841737 841874 . - 0 ID=CDS:Rv0749A;Parent=transcript:Rv0749A;protein_id=Rv0749A ### -Chromosome ena gene 842033 842278 . + . ID=gene:Rv0750;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0750;logic_name=ena +Chromosome ena gene 842033 842278 . + . ID=gene:Rv0750;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0750;logic_name=ena Chromosome ena mRNA 842033 842278 . + . ID=transcript:Rv0750;Parent=gene:Rv0750;biotype=protein_coding;transcript_id=Rv0750 Chromosome ena exon 842033 842278 . + . Parent=transcript:Rv0750;Name=Rv0750-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0750-1;rank=1 Chromosome ena CDS 842033 842278 . + 0 ID=CDS:Rv0750;Parent=transcript:Rv0750;protein_id=Rv0750 ### -Chromosome ena gene 842347 843231 . - . ID=gene:Rv0751c;Name=mmsB;biotype=protein_coding;description=Probable 3-hydroxyisobutyrate dehydrogenase MmsB (hibadh);gene_id=Rv0751c;logic_name=ena +Chromosome ena gene 842347 843231 . - . ID=gene:Rv0751c;Name=mmsB;biotype=protein_coding;description=Probable 3-hydroxyisobutyrate dehydrogenase MmsB (hibadh);gene_id=Rv0751c;logic_name=ena Chromosome ena mRNA 842347 843231 . - . ID=transcript:Rv0751c;Parent=gene:Rv0751c;Name=mmsB-1;biotype=protein_coding;transcript_id=Rv0751c Chromosome ena exon 842347 843231 . - . Parent=transcript:Rv0751c;Name=Rv0751c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0751c-1;rank=1 Chromosome ena CDS 842347 843231 . - 0 ID=CDS:Rv0751c;Parent=transcript:Rv0751c;protein_id=Rv0751c ### -Chromosome ena gene 843242 844414 . - . ID=gene:Rv0752c;Name=fadE9;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE9;gene_id=Rv0752c;logic_name=ena +Chromosome ena gene 843242 844414 . - . ID=gene:Rv0752c;Name=fadE9;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE9;gene_id=Rv0752c;logic_name=ena Chromosome ena mRNA 843242 844414 . - . ID=transcript:Rv0752c;Parent=gene:Rv0752c;Name=fadE9-1;biotype=protein_coding;transcript_id=Rv0752c Chromosome ena exon 843242 844414 . - . Parent=transcript:Rv0752c;Name=Rv0752c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0752c-1;rank=1 Chromosome ena CDS 843242 844414 . - 0 ID=CDS:Rv0752c;Parent=transcript:Rv0752c;protein_id=Rv0752c ### -Chromosome ena gene 844421 845953 . - . ID=gene:Rv0753c;Name=mmsA;biotype=protein_coding;description=Probable methylmalonate-semialdehyde dehydrogenase MmsA (methylmalonic acid semialdehyde dehydrogenase) (MMSDH);gene_id=Rv0753c;logic_name=ena +Chromosome ena gene 844421 845953 . - . ID=gene:Rv0753c;Name=mmsA;biotype=protein_coding;description=Probable methylmalonate-semialdehyde dehydrogenase MmsA (methylmalonic acid semialdehyde dehydrogenase) (MMSDH);gene_id=Rv0753c;logic_name=ena Chromosome ena mRNA 844421 845953 . - . ID=transcript:Rv0753c;Parent=gene:Rv0753c;Name=mmsA-1;biotype=protein_coding;transcript_id=Rv0753c Chromosome ena exon 844421 845953 . - . Parent=transcript:Rv0753c;Name=Rv0753c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0753c-1;rank=1 Chromosome ena CDS 844421 845953 . - 0 ID=CDS:Rv0753c;Parent=transcript:Rv0753c;protein_id=Rv0753c ### -Chromosome ena gene 846159 847913 . + . ID=gene:Rv0754;Name=PE_PGRS11;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS11;gene_id=Rv0754;logic_name=ena +Chromosome ena gene 846159 847913 . + . ID=gene:Rv0754;Name=PE_PGRS11;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS11;gene_id=Rv0754;logic_name=ena Chromosome ena mRNA 846159 847913 . + . ID=transcript:Rv0754;Parent=gene:Rv0754;Name=PE_PGRS11-1;biotype=protein_coding;transcript_id=Rv0754 Chromosome ena exon 846159 847913 . + . Parent=transcript:Rv0754;Name=Rv0754-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0754-1;rank=1 Chromosome ena CDS 846159 847913 . + 0 ID=CDS:Rv0754;Parent=transcript:Rv0754;protein_id=Rv0754 ### -Chromosome ena gene 848103 850040 . - . ID=gene:Rv0755c;Name=PPE12;biotype=protein_coding;description=PPE family protein PPE12;gene_id=Rv0755c;logic_name=ena +Chromosome ena gene 848103 850040 . - . ID=gene:Rv0755c;Name=PPE12;biotype=protein_coding;description=PPE family protein PPE12;gene_id=Rv0755c;logic_name=ena Chromosome ena mRNA 848103 850040 . - . ID=transcript:Rv0755c;Parent=gene:Rv0755c;Name=PPE12-1;biotype=protein_coding;transcript_id=Rv0755c Chromosome ena exon 848103 850040 . - . Parent=transcript:Rv0755c;Name=Rv0755c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0755c-1;rank=1 Chromosome ena CDS 848103 850040 . - 0 ID=CDS:Rv0755c;Parent=transcript:Rv0755c;protein_id=Rv0755c ### -Chromosome ena gene 850342 850527 . - . ID=gene:Rv0755A;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv0755A;logic_name=ena +Chromosome ena gene 850342 850527 . - . ID=gene:Rv0755A;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv0755A;logic_name=ena Chromosome ena mRNA 850342 850527 . - . ID=transcript:Rv0755A;Parent=gene:Rv0755A;biotype=protein_coding;transcript_id=Rv0755A Chromosome ena exon 850342 850527 . - . Parent=transcript:Rv0755A;Name=Rv0755A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0755A-1;rank=1 Chromosome ena CDS 850342 850527 . - 0 ID=CDS:Rv0755A;Parent=transcript:Rv0755A;protein_id=Rv0755A @@ -3968,354 +3968,354 @@ Chromosome ena transcript 850642 850713 . - . ID=transcript:EBG00000313351;Paren Chromosome ena exon 850642 850713 . - . Parent=transcript:EBG00000313351;Name=EBG00000313351;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313351;rank=1 ### Chromosome ena_gene biological_region 850642 850713 . - . external_name=AL123456.3:gene:complement(850642..850713);logic_name=ena_gene -Chromosome ena gene 850741 851466 . - . ID=gene:Rv0756c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0756c;logic_name=ena +Chromosome ena gene 850741 851466 . - . ID=gene:Rv0756c;biotype=protein_coding;description=Unknown protein;gene_id=Rv0756c;logic_name=ena Chromosome ena mRNA 850741 851466 . - . ID=transcript:Rv0756c;Parent=gene:Rv0756c;biotype=protein_coding;transcript_id=Rv0756c Chromosome ena exon 850741 851466 . - . Parent=transcript:Rv0756c;Name=Rv0756c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0756c-1;rank=1 Chromosome ena CDS 850741 851466 . - 0 ID=CDS:Rv0756c;Parent=transcript:Rv0756c;protein_id=Rv0756c ### -Chromosome ena gene 851608 852351 . + . ID=gene:Rv0757;Name=phoP;biotype=protein_coding;description=Possible two component system response transcriptional positive regulator PhoP;gene_id=Rv0757;logic_name=ena +Chromosome ena gene 851608 852351 . + . ID=gene:Rv0757;Name=phoP;biotype=protein_coding;description=Possible two component system response transcriptional positive regulator PhoP;gene_id=Rv0757;logic_name=ena Chromosome ena mRNA 851608 852351 . + . ID=transcript:Rv0757;Parent=gene:Rv0757;Name=phoP-1;biotype=protein_coding;transcript_id=Rv0757 Chromosome ena exon 851608 852351 . + . Parent=transcript:Rv0757;Name=Rv0757-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0757-1;rank=1 Chromosome ena CDS 851608 852351 . + 0 ID=CDS:Rv0757;Parent=transcript:Rv0757;protein_id=Rv0757 ### -Chromosome ena gene 852396 853853 . + . ID=gene:Rv0758;Name=phoR;biotype=protein_coding;description=Possible two component system response sensor kinase membrane associated PhoR;gene_id=Rv0758;logic_name=ena +Chromosome ena gene 852396 853853 . + . ID=gene:Rv0758;Name=phoR;biotype=protein_coding;description=Possible two component system response sensor kinase membrane associated PhoR;gene_id=Rv0758;logic_name=ena Chromosome ena mRNA 852396 853853 . + . ID=transcript:Rv0758;Parent=gene:Rv0758;Name=phoR-1;biotype=protein_coding;transcript_id=Rv0758 Chromosome ena exon 852396 853853 . + . Parent=transcript:Rv0758;Name=Rv0758-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0758-1;rank=1 Chromosome ena CDS 852396 853853 . + 0 ID=CDS:Rv0758;Parent=transcript:Rv0758;protein_id=Rv0758 ### -Chromosome ena gene 853825 854157 . - . ID=gene:Rv0759c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0759c;logic_name=ena +Chromosome ena gene 853825 854157 . - . ID=gene:Rv0759c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0759c;logic_name=ena Chromosome ena mRNA 853825 854157 . - . ID=transcript:Rv0759c;Parent=gene:Rv0759c;biotype=protein_coding;transcript_id=Rv0759c Chromosome ena exon 853825 854157 . - . Parent=transcript:Rv0759c;Name=Rv0759c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0759c-1;rank=1 Chromosome ena CDS 853825 854157 . - 0 ID=CDS:Rv0759c;Parent=transcript:Rv0759c;protein_id=Rv0759c ### -Chromosome ena gene 854267 854686 . - . ID=gene:Rv0760c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0760c;logic_name=ena +Chromosome ena gene 854267 854686 . - . ID=gene:Rv0760c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0760c;logic_name=ena Chromosome ena mRNA 854267 854686 . - . ID=transcript:Rv0760c;Parent=gene:Rv0760c;biotype=protein_coding;transcript_id=Rv0760c Chromosome ena exon 854267 854686 . - . Parent=transcript:Rv0760c;Name=Rv0760c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0760c-1;rank=1 Chromosome ena CDS 854267 854686 . - 0 ID=CDS:Rv0760c;Parent=transcript:Rv0760c;protein_id=Rv0760c ### -Chromosome ena gene 854699 855826 . - . ID=gene:Rv0761c;Name=adhB;biotype=protein_coding;description=Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB;gene_id=Rv0761c;logic_name=ena +Chromosome ena gene 854699 855826 . - . ID=gene:Rv0761c;Name=adhB;biotype=protein_coding;description=Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB;gene_id=Rv0761c;logic_name=ena Chromosome ena mRNA 854699 855826 . - . ID=transcript:Rv0761c;Parent=gene:Rv0761c;Name=adhB-1;biotype=protein_coding;transcript_id=Rv0761c Chromosome ena exon 854699 855826 . - . Parent=transcript:Rv0761c;Name=Rv0761c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0761c-1;rank=1 Chromosome ena CDS 854699 855826 . - 0 ID=CDS:Rv0761c;Parent=transcript:Rv0761c;protein_id=Rv0761c ### -Chromosome ena gene 855925 856470 . - . ID=gene:Rv0762c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0762c;logic_name=ena +Chromosome ena gene 855925 856470 . - . ID=gene:Rv0762c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0762c;logic_name=ena Chromosome ena mRNA 855925 856470 . - . ID=transcript:Rv0762c;Parent=gene:Rv0762c;biotype=protein_coding;transcript_id=Rv0762c Chromosome ena exon 855925 856470 . - . Parent=transcript:Rv0762c;Name=Rv0762c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0762c-1;rank=1 Chromosome ena CDS 855925 856470 . - 0 ID=CDS:Rv0762c;Parent=transcript:Rv0762c;protein_id=Rv0762c ### -Chromosome ena gene 856473 856679 . - . ID=gene:Rv0763c;biotype=protein_coding;description=Possible ferredoxin;gene_id=Rv0763c;logic_name=ena +Chromosome ena gene 856473 856679 . - . ID=gene:Rv0763c;biotype=protein_coding;description=Possible ferredoxin;gene_id=Rv0763c;logic_name=ena Chromosome ena mRNA 856473 856679 . - . ID=transcript:Rv0763c;Parent=gene:Rv0763c;biotype=protein_coding;transcript_id=Rv0763c Chromosome ena exon 856473 856679 . - . Parent=transcript:Rv0763c;Name=Rv0763c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0763c-1;rank=1 Chromosome ena CDS 856473 856679 . - 0 ID=CDS:Rv0763c;Parent=transcript:Rv0763c;protein_id=Rv0763c ### -Chromosome ena gene 856682 858037 . - . ID=gene:Rv0764c;Name=cyp51;biotype=protein_coding;description=Cytochrome P450 51 Cyp51 (CYPL1) (P450-L1A1) (sterol 14-alpha demethylase) (lanosterol 14-alpha demethylase) (P450-14DM);gene_id=Rv0764c;logic_name=ena +Chromosome ena gene 856682 858037 . - . ID=gene:Rv0764c;Name=cyp51;biotype=protein_coding;description=Cytochrome P450 51 Cyp51 (CYPL1) (P450-L1A1) (sterol 14-alpha demethylase) (lanosterol 14-alpha demethylase) (P450-14DM);gene_id=Rv0764c;logic_name=ena Chromosome ena mRNA 856682 858037 . - . ID=transcript:Rv0764c;Parent=gene:Rv0764c;Name=cyp51-1;biotype=protein_coding;transcript_id=Rv0764c Chromosome ena exon 856682 858037 . - . Parent=transcript:Rv0764c;Name=Rv0764c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0764c-1;rank=1 Chromosome ena CDS 856682 858037 . - 0 ID=CDS:Rv0764c;Parent=transcript:Rv0764c;protein_id=Rv0764c ### -Chromosome ena gene 858037 858864 . - . ID=gene:Rv0765c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0765c;logic_name=ena +Chromosome ena gene 858037 858864 . - . ID=gene:Rv0765c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0765c;logic_name=ena Chromosome ena mRNA 858037 858864 . - . ID=transcript:Rv0765c;Parent=gene:Rv0765c;biotype=protein_coding;transcript_id=Rv0765c Chromosome ena exon 858037 858864 . - . Parent=transcript:Rv0765c;Name=Rv0765c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0765c-1;rank=1 Chromosome ena CDS 858037 858864 . - 0 ID=CDS:Rv0765c;Parent=transcript:Rv0765c;protein_id=Rv0765c ### -Chromosome ena gene 858864 860072 . - . ID=gene:Rv0766c;Name=cyp123;biotype=protein_coding;description=Probable cytochrome P450 123 Cyp123;gene_id=Rv0766c;logic_name=ena +Chromosome ena gene 858864 860072 . - . ID=gene:Rv0766c;Name=cyp123;biotype=protein_coding;description=Probable cytochrome P450 123 Cyp123;gene_id=Rv0766c;logic_name=ena Chromosome ena mRNA 858864 860072 . - . ID=transcript:Rv0766c;Parent=gene:Rv0766c;Name=cyp123-1;biotype=protein_coding;transcript_id=Rv0766c Chromosome ena exon 858864 860072 . - . Parent=transcript:Rv0766c;Name=Rv0766c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0766c-1;rank=1 Chromosome ena CDS 858864 860072 . - 0 ID=CDS:Rv0766c;Parent=transcript:Rv0766c;protein_id=Rv0766c ### -Chromosome ena gene 860069 860710 . - . ID=gene:Rv0767c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0767c;logic_name=ena +Chromosome ena gene 860069 860710 . - . ID=gene:Rv0767c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0767c;logic_name=ena Chromosome ena mRNA 860069 860710 . - . ID=transcript:Rv0767c;Parent=gene:Rv0767c;biotype=protein_coding;transcript_id=Rv0767c Chromosome ena exon 860069 860710 . - . Parent=transcript:Rv0767c;Name=Rv0767c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0767c-1;rank=1 Chromosome ena CDS 860069 860710 . - 0 ID=CDS:Rv0767c;Parent=transcript:Rv0767c;protein_id=Rv0767c ### -Chromosome ena gene 860912 862381 . + . ID=gene:Rv0768;Name=aldA;biotype=protein_coding;description=Probable aldehyde dehydrogenase NAD dependent AldA (aldehyde dehydrogenase [NAD+]);gene_id=Rv0768;logic_name=ena +Chromosome ena gene 860912 862381 . + . ID=gene:Rv0768;Name=aldA;biotype=protein_coding;description=Probable aldehyde dehydrogenase NAD dependent AldA (aldehyde dehydrogenase [NAD+]);gene_id=Rv0768;logic_name=ena Chromosome ena mRNA 860912 862381 . + . ID=transcript:Rv0768;Parent=gene:Rv0768;Name=aldA-1;biotype=protein_coding;transcript_id=Rv0768 Chromosome ena exon 860912 862381 . + . Parent=transcript:Rv0768;Name=Rv0768-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0768-1;rank=1 Chromosome ena CDS 860912 862381 . + 0 ID=CDS:Rv0768;Parent=transcript:Rv0768;protein_id=Rv0768 ### -Chromosome ena gene 862412 863158 . + . ID=gene:Rv0769;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0769;logic_name=ena +Chromosome ena gene 862412 863158 . + . ID=gene:Rv0769;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0769;logic_name=ena Chromosome ena mRNA 862412 863158 . + . ID=transcript:Rv0769;Parent=gene:Rv0769;biotype=protein_coding;transcript_id=Rv0769 Chromosome ena exon 862412 863158 . + . Parent=transcript:Rv0769;Name=Rv0769-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0769-1;rank=1 Chromosome ena CDS 862412 863158 . + 0 ID=CDS:Rv0769;Parent=transcript:Rv0769;protein_id=Rv0769 ### -Chromosome ena gene 863256 864143 . + . ID=gene:Rv0770;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0770;logic_name=ena +Chromosome ena gene 863256 864143 . + . ID=gene:Rv0770;biotype=protein_coding;description=Probable dehydrogenase/reductase;gene_id=Rv0770;logic_name=ena Chromosome ena mRNA 863256 864143 . + . ID=transcript:Rv0770;Parent=gene:Rv0770;biotype=protein_coding;transcript_id=Rv0770 Chromosome ena exon 863256 864143 . + . Parent=transcript:Rv0770;Name=Rv0770-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0770-1;rank=1 Chromosome ena CDS 863256 864143 . + 0 ID=CDS:Rv0770;Parent=transcript:Rv0770;protein_id=Rv0770 ### -Chromosome ena gene 864140 864574 . + . ID=gene:Rv0771;biotype=protein_coding;description=Possible 4-carboxymuconolactone decarboxylase (CMD);gene_id=Rv0771;logic_name=ena +Chromosome ena gene 864140 864574 . + . ID=gene:Rv0771;biotype=protein_coding;description=Possible 4-carboxymuconolactone decarboxylase (CMD);gene_id=Rv0771;logic_name=ena Chromosome ena mRNA 864140 864574 . + . ID=transcript:Rv0771;Parent=gene:Rv0771;biotype=protein_coding;transcript_id=Rv0771 Chromosome ena exon 864140 864574 . + . Parent=transcript:Rv0771;Name=Rv0771-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0771-1;rank=1 Chromosome ena CDS 864140 864574 . + 0 ID=CDS:Rv0771;Parent=transcript:Rv0771;protein_id=Rv0771 ### -Chromosome ena gene 864586 865854 . + . ID=gene:Rv0772;Name=purD;biotype=protein_coding;description=Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase);gene_id=Rv0772;logic_name=ena +Chromosome ena gene 864586 865854 . + . ID=gene:Rv0772;Name=purD;biotype=protein_coding;description=Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase);gene_id=Rv0772;logic_name=ena Chromosome ena mRNA 864586 865854 . + . ID=transcript:Rv0772;Parent=gene:Rv0772;Name=purD-1;biotype=protein_coding;transcript_id=Rv0772 Chromosome ena exon 864586 865854 . + . Parent=transcript:Rv0772;Name=Rv0772-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0772-1;rank=1 Chromosome ena CDS 864586 865854 . + 0 ID=CDS:Rv0772;Parent=transcript:Rv0772;protein_id=Rv0772 ### -Chromosome ena gene 865851 867389 . - . ID=gene:Rv0773c;Name=ggtA;biotype=protein_coding;description=Probable bifunctional acylase GgtA: cephalosporin acylase (GL-7ACA acylase) + gamma-glutamyltranspeptidase (GGT);gene_id=Rv0773c;logic_name=ena +Chromosome ena gene 865851 867389 . - . ID=gene:Rv0773c;Name=ggtA;biotype=protein_coding;description=Probable bifunctional acylase GgtA: cephalosporin acylase (GL-7ACA acylase) + gamma-glutamyltranspeptidase (GGT);gene_id=Rv0773c;logic_name=ena Chromosome ena mRNA 865851 867389 . - . ID=transcript:Rv0773c;Parent=gene:Rv0773c;Name=ggtA-1;biotype=protein_coding;transcript_id=Rv0773c Chromosome ena exon 865851 867389 . - . Parent=transcript:Rv0773c;Name=Rv0773c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0773c-1;rank=1 Chromosome ena CDS 865851 867389 . - 0 ID=CDS:Rv0773c;Parent=transcript:Rv0773c;protein_id=Rv0773c ### -Chromosome ena gene 867440 868351 . - . ID=gene:Rv0774c;biotype=protein_coding;description=Probable conserved exported protein;gene_id=Rv0774c;logic_name=ena +Chromosome ena gene 867440 868351 . - . ID=gene:Rv0774c;biotype=protein_coding;description=Probable conserved exported protein;gene_id=Rv0774c;logic_name=ena Chromosome ena mRNA 867440 868351 . - . ID=transcript:Rv0774c;Parent=gene:Rv0774c;biotype=protein_coding;transcript_id=Rv0774c Chromosome ena exon 867440 868351 . - . Parent=transcript:Rv0774c;Name=Rv0774c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0774c-1;rank=1 Chromosome ena CDS 867440 868351 . - 0 ID=CDS:Rv0774c;Parent=transcript:Rv0774c;protein_id=Rv0774c ### -Chromosome ena gene 868407 869030 . + . ID=gene:Rv0775;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0775;logic_name=ena +Chromosome ena gene 868407 869030 . + . ID=gene:Rv0775;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0775;logic_name=ena Chromosome ena mRNA 868407 869030 . + . ID=transcript:Rv0775;Parent=gene:Rv0775;biotype=protein_coding;transcript_id=Rv0775 Chromosome ena exon 868407 869030 . + . Parent=transcript:Rv0775;Name=Rv0775-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0775-1;rank=1 Chromosome ena CDS 868407 869030 . + 0 ID=CDS:Rv0775;Parent=transcript:Rv0775;protein_id=Rv0775 ### -Chromosome ena gene 868984 869763 . - . ID=gene:Rv0776c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0776c;logic_name=ena +Chromosome ena gene 868984 869763 . - . ID=gene:Rv0776c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0776c;logic_name=ena Chromosome ena mRNA 868984 869763 . - . ID=transcript:Rv0776c;Parent=gene:Rv0776c;biotype=protein_coding;transcript_id=Rv0776c Chromosome ena exon 868984 869763 . - . Parent=transcript:Rv0776c;Name=Rv0776c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0776c-1;rank=1 Chromosome ena CDS 868984 869763 . - 0 ID=CDS:Rv0776c;Parent=transcript:Rv0776c;protein_id=Rv0776c ### -Chromosome ena gene 870008 871426 . + . ID=gene:Rv0777;Name=purB;biotype=protein_coding;description=Probable adenylosuccinate lyase PurB (adenylosuccinase) (ASL) (ASASE);gene_id=Rv0777;logic_name=ena +Chromosome ena gene 870008 871426 . + . ID=gene:Rv0777;Name=purB;biotype=protein_coding;description=Probable adenylosuccinate lyase PurB (adenylosuccinase) (ASL) (ASASE);gene_id=Rv0777;logic_name=ena Chromosome ena mRNA 870008 871426 . + . ID=transcript:Rv0777;Parent=gene:Rv0777;Name=purB-1;biotype=protein_coding;transcript_id=Rv0777 Chromosome ena exon 870008 871426 . + . Parent=transcript:Rv0777;Name=Rv0777-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0777-1;rank=1 Chromosome ena CDS 870008 871426 . + 0 ID=CDS:Rv0777;Parent=transcript:Rv0777;protein_id=Rv0777 ### -Chromosome ena gene 871431 872675 . + . ID=gene:Rv0778;Name=cyp126;biotype=protein_coding;description=Possible cytochrome P450 126 Cyp126;gene_id=Rv0778;logic_name=ena +Chromosome ena gene 871431 872675 . + . ID=gene:Rv0778;Name=cyp126;biotype=protein_coding;description=Possible cytochrome P450 126 Cyp126;gene_id=Rv0778;logic_name=ena Chromosome ena mRNA 871431 872675 . + . ID=transcript:Rv0778;Parent=gene:Rv0778;Name=cyp126-1;biotype=protein_coding;transcript_id=Rv0778 Chromosome ena exon 871431 872675 . + . Parent=transcript:Rv0778;Name=Rv0778-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0778-1;rank=1 Chromosome ena CDS 871431 872675 . + 0 ID=CDS:Rv0778;Parent=transcript:Rv0778;protein_id=Rv0778 ### -Chromosome ena gene 872672 873292 . - . ID=gene:Rv0779c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0779c;logic_name=ena +Chromosome ena gene 872672 873292 . - . ID=gene:Rv0779c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0779c;logic_name=ena Chromosome ena mRNA 872672 873292 . - . ID=transcript:Rv0779c;Parent=gene:Rv0779c;biotype=protein_coding;transcript_id=Rv0779c Chromosome ena exon 872672 873292 . - . Parent=transcript:Rv0779c;Name=Rv0779c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0779c-1;rank=1 Chromosome ena CDS 872672 873292 . - 0 ID=CDS:Rv0779c;Parent=transcript:Rv0779c;protein_id=Rv0779c ### -Chromosome ena gene 873343 874236 . + . ID=gene:Rv0780;Name=purC;biotype=protein_coding;description=Phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (SAICAR synthetase);gene_id=Rv0780;logic_name=ena +Chromosome ena gene 873343 874236 . + . ID=gene:Rv0780;Name=purC;biotype=protein_coding;description=Phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (SAICAR synthetase);gene_id=Rv0780;logic_name=ena Chromosome ena mRNA 873343 874236 . + . ID=transcript:Rv0780;Parent=gene:Rv0780;Name=purC-1;biotype=protein_coding;transcript_id=Rv0780 Chromosome ena exon 873343 874236 . + . Parent=transcript:Rv0780;Name=Rv0780-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0780-1;rank=1 Chromosome ena CDS 873343 874236 . + 0 ID=CDS:Rv0780;Parent=transcript:Rv0780;protein_id=Rv0780 ### -Chromosome ena gene 874233 874943 . + . ID=gene:Rv0781;Name=ptrBa;biotype=protein_coding;description=Probable protease II PtrBa [first part] (oligopeptidase B);gene_id=Rv0781;logic_name=ena +Chromosome ena gene 874233 874943 . + . ID=gene:Rv0781;Name=ptrBa;biotype=protein_coding;description=Probable protease II PtrBa [first part] (oligopeptidase B);gene_id=Rv0781;logic_name=ena Chromosome ena mRNA 874233 874943 . + . ID=transcript:Rv0781;Parent=gene:Rv0781;Name=ptrBa-1;biotype=protein_coding;transcript_id=Rv0781 Chromosome ena exon 874233 874943 . + . Parent=transcript:Rv0781;Name=Rv0781-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0781-1;rank=1 Chromosome ena CDS 874233 874943 . + 0 ID=CDS:Rv0781;Parent=transcript:Rv0781;protein_id=Rv0781 ### -Chromosome ena gene 874732 876390 . + . ID=gene:Rv0782;Name=ptrBb;biotype=protein_coding;description=Probable protease II PtrBb [second part] (oligopeptidase B);gene_id=Rv0782;logic_name=ena +Chromosome ena gene 874732 876390 . + . ID=gene:Rv0782;Name=ptrBb;biotype=protein_coding;description=Probable protease II PtrBb [second part] (oligopeptidase B);gene_id=Rv0782;logic_name=ena Chromosome ena mRNA 874732 876390 . + . ID=transcript:Rv0782;Parent=gene:Rv0782;Name=ptrBb-1;biotype=protein_coding;transcript_id=Rv0782 Chromosome ena exon 874732 876390 . + . Parent=transcript:Rv0782;Name=Rv0782-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0782-1;rank=1 Chromosome ena CDS 874732 876390 . + 0 ID=CDS:Rv0782;Parent=transcript:Rv0782;protein_id=Rv0782 ### -Chromosome ena gene 876818 878440 . - . ID=gene:Rv0783c;Name=emrB;biotype=protein_coding;description=Possible multidrug resistance integral membrane efflux protein EmrB;gene_id=Rv0783c;logic_name=ena +Chromosome ena gene 876818 878440 . - . ID=gene:Rv0783c;Name=emrB;biotype=protein_coding;description=Possible multidrug resistance integral membrane efflux protein EmrB;gene_id=Rv0783c;logic_name=ena Chromosome ena mRNA 876818 878440 . - . ID=transcript:Rv0783c;Parent=gene:Rv0783c;Name=emrB-1;biotype=protein_coding;transcript_id=Rv0783c Chromosome ena exon 876818 878440 . - . Parent=transcript:Rv0783c;Name=Rv0783c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0783c-1;rank=1 Chromosome ena CDS 876818 878440 . - 0 ID=CDS:Rv0783c;Parent=transcript:Rv0783c;protein_id=Rv0783c ### -Chromosome ena gene 878638 879324 . + . ID=gene:Rv0784;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0784;logic_name=ena +Chromosome ena gene 878638 879324 . + . ID=gene:Rv0784;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0784;logic_name=ena Chromosome ena mRNA 878638 879324 . + . ID=transcript:Rv0784;Parent=gene:Rv0784;biotype=protein_coding;transcript_id=Rv0784 Chromosome ena exon 878638 879324 . + . Parent=transcript:Rv0784;Name=Rv0784-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0784-1;rank=1 Chromosome ena CDS 878638 879324 . + 0 ID=CDS:Rv0784;Parent=transcript:Rv0784;protein_id=Rv0784 ### -Chromosome ena gene 879340 881040 . + . ID=gene:Rv0785;biotype=protein_coding;description=Conserved protein;gene_id=Rv0785;logic_name=ena +Chromosome ena gene 879340 881040 . + . ID=gene:Rv0785;biotype=protein_coding;description=Conserved protein;gene_id=Rv0785;logic_name=ena Chromosome ena mRNA 879340 881040 . + . ID=transcript:Rv0785;Parent=gene:Rv0785;biotype=protein_coding;transcript_id=Rv0785 Chromosome ena exon 879340 881040 . + . Parent=transcript:Rv0785;Name=Rv0785-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0785-1;rank=1 Chromosome ena CDS 879340 881040 . + 0 ID=CDS:Rv0785;Parent=transcript:Rv0785;protein_id=Rv0785 ### -Chromosome ena gene 881075 881464 . - . ID=gene:Rv0786c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0786c;logic_name=ena +Chromosome ena gene 881075 881464 . - . ID=gene:Rv0786c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0786c;logic_name=ena Chromosome ena mRNA 881075 881464 . - . ID=transcript:Rv0786c;Parent=gene:Rv0786c;biotype=protein_coding;transcript_id=Rv0786c Chromosome ena exon 881075 881464 . - . Parent=transcript:Rv0786c;Name=Rv0786c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0786c-1;rank=1 Chromosome ena CDS 881075 881464 . - 0 ID=CDS:Rv0786c;Parent=transcript:Rv0786c;protein_id=Rv0786c ### -Chromosome ena gene 881459 882418 . + . ID=gene:Rv0787;biotype=protein_coding;description=Unknown protein;gene_id=Rv0787;logic_name=ena +Chromosome ena gene 881459 882418 . + . ID=gene:Rv0787;biotype=protein_coding;description=Unknown protein;gene_id=Rv0787;logic_name=ena Chromosome ena mRNA 881459 882418 . + . ID=transcript:Rv0787;Parent=gene:Rv0787;biotype=protein_coding;transcript_id=Rv0787 Chromosome ena exon 881459 882418 . + . Parent=transcript:Rv0787;Name=Rv0787-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0787-1;rank=1 Chromosome ena CDS 881459 882418 . + 0 ID=CDS:Rv0787;Parent=transcript:Rv0787;protein_id=Rv0787 ### -Chromosome ena gene 882524 882763 . + . ID=gene:Rv0787A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0787A;logic_name=ena +Chromosome ena gene 882524 882763 . + . ID=gene:Rv0787A;biotype=protein_coding;description=Conserved protein;gene_id=Rv0787A;logic_name=ena Chromosome ena mRNA 882524 882763 . + . ID=transcript:Rv0787A;Parent=gene:Rv0787A;biotype=protein_coding;transcript_id=Rv0787A Chromosome ena exon 882524 882763 . + . Parent=transcript:Rv0787A;Name=Rv0787A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0787A-1;rank=1 Chromosome ena CDS 882524 882763 . + 0 ID=CDS:Rv0787A;Parent=transcript:Rv0787A;protein_id=Rv0787A ### -Chromosome ena gene 882760 883434 . + . ID=gene:Rv0788;Name=purQ;biotype=protein_coding;description=Probable phosphoribosylformylglycinamidine synthase I PURG (FGAM synthase I);gene_id=Rv0788;logic_name=ena +Chromosome ena gene 882760 883434 . + . ID=gene:Rv0788;Name=purQ;biotype=protein_coding;description=Probable phosphoribosylformylglycinamidine synthase I PURG (FGAM synthase I);gene_id=Rv0788;logic_name=ena Chromosome ena mRNA 882760 883434 . + . ID=transcript:Rv0788;Parent=gene:Rv0788;Name=purQ-1;biotype=protein_coding;transcript_id=Rv0788 Chromosome ena exon 882760 883434 . + . Parent=transcript:Rv0788;Name=Rv0788-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0788-1;rank=1 Chromosome ena CDS 882760 883434 . + 0 ID=CDS:Rv0788;Parent=transcript:Rv0788;protein_id=Rv0788 ### -Chromosome ena gene 883451 884050 . - . ID=gene:Rv0789c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0789c;logic_name=ena +Chromosome ena gene 883451 884050 . - . ID=gene:Rv0789c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0789c;logic_name=ena Chromosome ena mRNA 883451 884050 . - . ID=transcript:Rv0789c;Parent=gene:Rv0789c;biotype=protein_coding;transcript_id=Rv0789c Chromosome ena exon 883451 884050 . - . Parent=transcript:Rv0789c;Name=Rv0789c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0789c-1;rank=1 Chromosome ena CDS 883451 884050 . - 0 ID=CDS:Rv0789c;Parent=transcript:Rv0789c;protein_id=Rv0789c ### -Chromosome ena gene 884072 884800 . - . ID=gene:Rv0790c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0790c;logic_name=ena +Chromosome ena gene 884072 884800 . - . ID=gene:Rv0790c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0790c;logic_name=ena Chromosome ena mRNA 884072 884800 . - . ID=transcript:Rv0790c;Parent=gene:Rv0790c;biotype=protein_coding;transcript_id=Rv0790c Chromosome ena exon 884072 884800 . - . Parent=transcript:Rv0790c;Name=Rv0790c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0790c-1;rank=1 Chromosome ena CDS 884072 884800 . - 0 ID=CDS:Rv0790c;Parent=transcript:Rv0790c;protein_id=Rv0790c ### -Chromosome ena gene 884797 885840 . - . ID=gene:Rv0791c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0791c;logic_name=ena +Chromosome ena gene 884797 885840 . - . ID=gene:Rv0791c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0791c;logic_name=ena Chromosome ena mRNA 884797 885840 . - . ID=transcript:Rv0791c;Parent=gene:Rv0791c;biotype=protein_coding;transcript_id=Rv0791c Chromosome ena exon 884797 885840 . - . Parent=transcript:Rv0791c;Name=Rv0791c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0791c-1;rank=1 Chromosome ena CDS 884797 885840 . - 0 ID=CDS:Rv0791c;Parent=transcript:Rv0791c;protein_id=Rv0791c ### -Chromosome ena gene 885837 886646 . - . ID=gene:Rv0792c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0792c;logic_name=ena +Chromosome ena gene 885837 886646 . - . ID=gene:Rv0792c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv0792c;logic_name=ena Chromosome ena mRNA 885837 886646 . - . ID=transcript:Rv0792c;Parent=gene:Rv0792c;biotype=protein_coding;transcript_id=Rv0792c Chromosome ena exon 885837 886646 . - . Parent=transcript:Rv0792c;Name=Rv0792c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0792c-1;rank=1 Chromosome ena CDS 885837 886646 . - 0 ID=CDS:Rv0792c;Parent=transcript:Rv0792c;protein_id=Rv0792c ### -Chromosome ena gene 886719 887024 . + . ID=gene:Rv0793;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv0793;logic_name=ena +Chromosome ena gene 886719 887024 . + . ID=gene:Rv0793;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv0793;logic_name=ena Chromosome ena mRNA 886719 887024 . + . ID=transcript:Rv0793;Parent=gene:Rv0793;biotype=protein_coding;transcript_id=Rv0793 Chromosome ena exon 886719 887024 . + . Parent=transcript:Rv0793;Name=Rv0793-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0793-1;rank=1 Chromosome ena CDS 886719 887024 . + 0 ID=CDS:Rv0793;Parent=transcript:Rv0793;protein_id=Rv0793 ### -Chromosome ena gene 887137 888636 . - . ID=gene:Rv0794c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0794c;logic_name=ena +Chromosome ena gene 887137 888636 . - . ID=gene:Rv0794c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0794c;logic_name=ena Chromosome ena mRNA 887137 888636 . - . ID=transcript:Rv0794c;Parent=gene:Rv0794c;biotype=protein_coding;transcript_id=Rv0794c Chromosome ena exon 887137 888636 . - . Parent=transcript:Rv0794c;Name=Rv0794c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0794c-1;rank=1 Chromosome ena CDS 887137 888636 . - 0 ID=CDS:Rv0794c;Parent=transcript:Rv0794c;protein_id=Rv0794c ### -Chromosome ena_mobile_element biological_region 889021 890375 . + . external_name=IS6110-1%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 889072 889398 . + . ID=gene:Rv0795;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv0795;logic_name=ena +Chromosome ena_mobile_element biological_region 889021 890375 . + . external_name=IS6110-1%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 889072 889398 . + . ID=gene:Rv0795;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv0795;logic_name=ena Chromosome ena mRNA 889072 889398 . + . ID=transcript:Rv0795;Parent=gene:Rv0795;biotype=protein_coding;transcript_id=Rv0795 Chromosome ena exon 889072 889398 . + . Parent=transcript:Rv0795;Name=Rv0795-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0795-1;rank=1 Chromosome ena CDS 889072 889398 . + 0 ID=CDS:Rv0795;Parent=transcript:Rv0795;protein_id=Rv0795 ### -Chromosome ena gene 889347 890333 . + . ID=gene:Rv0796;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110;gene_id=Rv0796;logic_name=ena +Chromosome ena gene 889347 890333 . + . ID=gene:Rv0796;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110;gene_id=Rv0796;logic_name=ena Chromosome ena mRNA 889347 890333 . + . ID=transcript:Rv0796;Parent=gene:Rv0796;biotype=protein_coding;transcript_id=Rv0796 Chromosome ena exon 889347 890333 . + . Parent=transcript:Rv0796;Name=Rv0796-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0796-1;rank=1 Chromosome ena CDS 889347 890333 . + 0 ID=CDS:Rv0796;Parent=transcript:Rv0796;protein_id=Rv0796 ### -Chromosome ena_mobile_element biological_region 890388 891479 . + . external_name=Rv0797%3B IS1547-1%2C len: 1092 nt. Insertion sequence IS1547.;logic_name=ena_mobile_element -Chromosome ena gene 890388 891482 . + . ID=gene:Rv0797;biotype=protein_coding;description=Putative transposase for insertion sequence element IS1547;gene_id=Rv0797;logic_name=ena +Chromosome ena_mobile_element biological_region 890388 891479 . + . external_name=Rv0797%3B IS1547-1%2C len: 1092 nt. Insertion sequence IS1547.;logic_name=ena_mobile_element +Chromosome ena gene 890388 891482 . + . ID=gene:Rv0797;biotype=protein_coding;description=Putative transposase for insertion sequence element IS1547;gene_id=Rv0797;logic_name=ena Chromosome ena mRNA 890388 891482 . + . ID=transcript:Rv0797;Parent=gene:Rv0797;biotype=protein_coding;transcript_id=Rv0797 Chromosome ena exon 890388 891482 . + . Parent=transcript:Rv0797;Name=Rv0797-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0797-1;rank=1 Chromosome ena CDS 890388 891482 . + 0 ID=CDS:Rv0797;Parent=transcript:Rv0797;protein_id=Rv0797 ### -Chromosome ena gene 891472 892269 . - . ID=gene:Rv0798c;Name=cfp29;biotype=protein_coding;description=29 KDa antigen CFP29;gene_id=Rv0798c;logic_name=ena +Chromosome ena gene 891472 892269 . - . ID=gene:Rv0798c;Name=cfp29;biotype=protein_coding;description=29 KDa antigen CFP29;gene_id=Rv0798c;logic_name=ena Chromosome ena mRNA 891472 892269 . - . ID=transcript:Rv0798c;Parent=gene:Rv0798c;Name=cfp29-1;biotype=protein_coding;transcript_id=Rv0798c Chromosome ena exon 891472 892269 . - . Parent=transcript:Rv0798c;Name=Rv0798c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0798c-1;rank=1 Chromosome ena CDS 891472 892269 . - 0 ID=CDS:Rv0798c;Parent=transcript:Rv0798c;protein_id=Rv0798c ### -Chromosome ena gene 892266 893273 . - . ID=gene:Rv0799c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0799c;logic_name=ena +Chromosome ena gene 892266 893273 . - . ID=gene:Rv0799c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0799c;logic_name=ena Chromosome ena mRNA 892266 893273 . - . ID=transcript:Rv0799c;Parent=gene:Rv0799c;biotype=protein_coding;transcript_id=Rv0799c Chromosome ena exon 892266 893273 . - . Parent=transcript:Rv0799c;Name=Rv0799c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0799c-1;rank=1 Chromosome ena CDS 892266 893273 . - 0 ID=CDS:Rv0799c;Parent=transcript:Rv0799c;protein_id=Rv0799c ### -Chromosome ena gene 893318 894619 . + . ID=gene:Rv0800;Name=pepC;biotype=protein_coding;description=Probable aminopeptidase PepC;gene_id=Rv0800;logic_name=ena +Chromosome ena gene 893318 894619 . + . ID=gene:Rv0800;Name=pepC;biotype=protein_coding;description=Probable aminopeptidase PepC;gene_id=Rv0800;logic_name=ena Chromosome ena mRNA 893318 894619 . + . ID=transcript:Rv0800;Parent=gene:Rv0800;Name=pepC-1;biotype=protein_coding;transcript_id=Rv0800 Chromosome ena exon 893318 894619 . + . Parent=transcript:Rv0800;Name=Rv0800-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0800-1;rank=1 Chromosome ena CDS 893318 894619 . + 0 ID=CDS:Rv0800;Parent=transcript:Rv0800;protein_id=Rv0800 ### -Chromosome ena gene 894631 894978 . + . ID=gene:Rv0801;biotype=protein_coding;description=Conserved protein;gene_id=Rv0801;logic_name=ena +Chromosome ena gene 894631 894978 . + . ID=gene:Rv0801;biotype=protein_coding;description=Conserved protein;gene_id=Rv0801;logic_name=ena Chromosome ena mRNA 894631 894978 . + . ID=transcript:Rv0801;Parent=gene:Rv0801;biotype=protein_coding;transcript_id=Rv0801 Chromosome ena exon 894631 894978 . + . Parent=transcript:Rv0801;Name=Rv0801-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0801-1;rank=1 Chromosome ena CDS 894631 894978 . + 0 ID=CDS:Rv0801;Parent=transcript:Rv0801;protein_id=Rv0801 ### -Chromosome ena gene 894972 895628 . - . ID=gene:Rv0802c;biotype=protein_coding;description=Possible succinyltransferase in the GCN5-related N-acetyltransferase family;gene_id=Rv0802c;logic_name=ena +Chromosome ena gene 894972 895628 . - . ID=gene:Rv0802c;biotype=protein_coding;description=Possible succinyltransferase in the GCN5-related N-acetyltransferase family;gene_id=Rv0802c;logic_name=ena Chromosome ena mRNA 894972 895628 . - . ID=transcript:Rv0802c;Parent=gene:Rv0802c;biotype=protein_coding;transcript_id=Rv0802c Chromosome ena exon 894972 895628 . - . Parent=transcript:Rv0802c;Name=Rv0802c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0802c-1;rank=1 Chromosome ena CDS 894972 895628 . - 0 ID=CDS:Rv0802c;Parent=transcript:Rv0802c;protein_id=Rv0802c ### -Chromosome ena gene 895820 898084 . + . ID=gene:Rv0803;Name=purL;biotype=protein_coding;description=Phosphoribosylformylglycinamidine synthase II PurL (FGAM synthase II);gene_id=Rv0803;logic_name=ena +Chromosome ena gene 895820 898084 . + . ID=gene:Rv0803;Name=purL;biotype=protein_coding;description=Phosphoribosylformylglycinamidine synthase II PurL (FGAM synthase II);gene_id=Rv0803;logic_name=ena Chromosome ena mRNA 895820 898084 . + . ID=transcript:Rv0803;Parent=gene:Rv0803;Name=purL-1;biotype=protein_coding;transcript_id=Rv0803 Chromosome ena exon 895820 898084 . + . Parent=transcript:Rv0803;Name=Rv0803-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0803-1;rank=1 Chromosome ena CDS 895820 898084 . + 0 ID=CDS:Rv0803;Parent=transcript:Rv0803;protein_id=Rv0803 ### -Chromosome ena gene 898081 898710 . + . ID=gene:Rv0804;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0804;logic_name=ena +Chromosome ena gene 898081 898710 . + . ID=gene:Rv0804;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0804;logic_name=ena Chromosome ena mRNA 898081 898710 . + . ID=transcript:Rv0804;Parent=gene:Rv0804;biotype=protein_coding;transcript_id=Rv0804 Chromosome ena exon 898081 898710 . + . Parent=transcript:Rv0804;Name=Rv0804-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0804-1;rank=1 Chromosome ena CDS 898081 898710 . + 0 ID=CDS:Rv0804;Parent=transcript:Rv0804;protein_id=Rv0804 ### -Chromosome ena gene 898831 899787 . + . ID=gene:Rv0805;biotype=protein_coding;description=Class III cyclic nucleotide phosphodiesterase (cNMP PDE);gene_id=Rv0805;logic_name=ena +Chromosome ena gene 898831 899787 . + . ID=gene:Rv0805;biotype=protein_coding;description=Class III cyclic nucleotide phosphodiesterase (cNMP PDE);gene_id=Rv0805;logic_name=ena Chromosome ena mRNA 898831 899787 . + . ID=transcript:Rv0805;Parent=gene:Rv0805;biotype=protein_coding;transcript_id=Rv0805 Chromosome ena exon 898831 899787 . + . Parent=transcript:Rv0805;Name=Rv0805-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0805-1;rank=1 Chromosome ena CDS 898831 899787 . + 0 ID=CDS:Rv0805;Parent=transcript:Rv0805;protein_id=Rv0805 ### -Chromosome ena gene 899732 901330 . - . ID=gene:Rv0806c;Name=cpsY;biotype=protein_coding;description=Possible UDP-glucose-4-epimerase CpsY (galactowaldenase) (UDP-galactose-4-epimerase) (uridine diphosphate galactose-4-epimerase) (uridine diphospho-galactose-4-epimerase);gene_id=Rv0806c;logic_name=ena +Chromosome ena gene 899732 901330 . - . ID=gene:Rv0806c;Name=cpsY;biotype=protein_coding;description=Possible UDP-glucose-4-epimerase CpsY (galactowaldenase) (UDP-galactose-4-epimerase) (uridine diphosphate galactose-4-epimerase) (uridine diphospho-galactose-4-epimerase);gene_id=Rv0806c;logic_name=ena Chromosome ena mRNA 899732 901330 . - . ID=transcript:Rv0806c;Parent=gene:Rv0806c;Name=cpsY-1;biotype=protein_coding;transcript_id=Rv0806c Chromosome ena exon 899732 901330 . - . Parent=transcript:Rv0806c;Name=Rv0806c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0806c-1;rank=1 Chromosome ena CDS 899732 901330 . - 0 ID=CDS:Rv0806c;Parent=transcript:Rv0806c;protein_id=Rv0806c ### -Chromosome ena gene 901635 902024 . + . ID=gene:Rv0807;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0807;logic_name=ena +Chromosome ena gene 901635 902024 . + . ID=gene:Rv0807;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0807;logic_name=ena Chromosome ena mRNA 901635 902024 . + . ID=transcript:Rv0807;Parent=gene:Rv0807;biotype=protein_coding;transcript_id=Rv0807 Chromosome ena exon 901635 902024 . + . Parent=transcript:Rv0807;Name=Rv0807-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0807-1;rank=1 Chromosome ena CDS 901635 902024 . + 0 ID=CDS:Rv0807;Parent=transcript:Rv0807;protein_id=Rv0807 ### -Chromosome ena gene 902111 903694 . + . ID=gene:Rv0808;Name=purF;biotype=protein_coding;description=Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase);gene_id=Rv0808;logic_name=ena +Chromosome ena gene 902111 903694 . + . ID=gene:Rv0808;Name=purF;biotype=protein_coding;description=Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase);gene_id=Rv0808;logic_name=ena Chromosome ena mRNA 902111 903694 . + . ID=transcript:Rv0808;Parent=gene:Rv0808;Name=purF-1;biotype=protein_coding;transcript_id=Rv0808 Chromosome ena exon 902111 903694 . + . Parent=transcript:Rv0808;Name=Rv0808-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0808-1;rank=1 Chromosome ena CDS 902111 903694 . + 0 ID=CDS:Rv0808;Parent=transcript:Rv0808;protein_id=Rv0808 ### -Chromosome ena gene 903725 904819 . + . ID=gene:Rv0809;Name=purM;biotype=protein_coding;description=Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase);gene_id=Rv0809;logic_name=ena +Chromosome ena gene 903725 904819 . + . ID=gene:Rv0809;Name=purM;biotype=protein_coding;description=Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase);gene_id=Rv0809;logic_name=ena Chromosome ena mRNA 903725 904819 . + . ID=transcript:Rv0809;Parent=gene:Rv0809;Name=purM-1;biotype=protein_coding;transcript_id=Rv0809 Chromosome ena exon 903725 904819 . + . Parent=transcript:Rv0809;Name=Rv0809-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0809-1;rank=1 Chromosome ena CDS 903725 904819 . + 0 ID=CDS:Rv0809;Parent=transcript:Rv0809;protein_id=Rv0809 ### -Chromosome ena gene 904905 905087 . - . ID=gene:Rv0810c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0810c;logic_name=ena +Chromosome ena gene 904905 905087 . - . ID=gene:Rv0810c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0810c;logic_name=ena Chromosome ena mRNA 904905 905087 . - . ID=transcript:Rv0810c;Parent=gene:Rv0810c;biotype=protein_coding;transcript_id=Rv0810c Chromosome ena exon 904905 905087 . - . Parent=transcript:Rv0810c;Name=Rv0810c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0810c-1;rank=1 Chromosome ena CDS 904905 905087 . - 0 ID=CDS:Rv0810c;Parent=transcript:Rv0810c;protein_id=Rv0810c ### -Chromosome ena gene 905234 906340 . - . ID=gene:Rv0811c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0811c;logic_name=ena +Chromosome ena gene 905234 906340 . - . ID=gene:Rv0811c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0811c;logic_name=ena Chromosome ena mRNA 905234 906340 . - . ID=transcript:Rv0811c;Parent=gene:Rv0811c;biotype=protein_coding;transcript_id=Rv0811c Chromosome ena exon 905234 906340 . - . Parent=transcript:Rv0811c;Name=Rv0811c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0811c-1;rank=1 Chromosome ena CDS 905234 906340 . - 0 ID=CDS:Rv0811c;Parent=transcript:Rv0811c;protein_id=Rv0811c ### -Chromosome ena gene 906423 907292 . + . ID=gene:Rv0812;biotype=protein_coding;description=Probable amino acid aminotransferase;gene_id=Rv0812;logic_name=ena +Chromosome ena gene 906423 907292 . + . ID=gene:Rv0812;biotype=protein_coding;description=Probable amino acid aminotransferase;gene_id=Rv0812;logic_name=ena Chromosome ena mRNA 906423 907292 . + . ID=transcript:Rv0812;Parent=gene:Rv0812;biotype=protein_coding;transcript_id=Rv0812 Chromosome ena exon 906423 907292 . + . Parent=transcript:Rv0812;Name=Rv0812-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0812-1;rank=1 Chromosome ena CDS 906423 907292 . + 0 ID=CDS:Rv0812;Parent=transcript:Rv0812;protein_id=Rv0812 ### -Chromosome ena gene 907338 908018 . - . ID=gene:Rv0813c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0813c;logic_name=ena +Chromosome ena gene 907338 908018 . - . ID=gene:Rv0813c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0813c;logic_name=ena Chromosome ena mRNA 907338 908018 . - . ID=transcript:Rv0813c;Parent=gene:Rv0813c;biotype=protein_coding;transcript_id=Rv0813c Chromosome ena exon 907338 908018 . - . Parent=transcript:Rv0813c;Name=Rv0813c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0813c-1;rank=1 Chromosome ena CDS 907338 908018 . - 0 ID=CDS:Rv0813c;Parent=transcript:Rv0813c;protein_id=Rv0813c ### -Chromosome ena gene 908181 908483 . - . ID=gene:Rv0814c;Name=sseC2;biotype=protein_coding;description=Conserved protein SseC2;gene_id=Rv0814c;logic_name=ena +Chromosome ena gene 908181 908483 . - . ID=gene:Rv0814c;Name=sseC2;biotype=protein_coding;description=Conserved protein SseC2;gene_id=Rv0814c;logic_name=ena Chromosome ena mRNA 908181 908483 . - . ID=transcript:Rv0814c;Parent=gene:Rv0814c;Name=sseC2-1;biotype=protein_coding;transcript_id=Rv0814c Chromosome ena exon 908181 908483 . - . Parent=transcript:Rv0814c;Name=Rv0814c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0814c-1;rank=1 Chromosome ena CDS 908181 908483 . - 0 ID=CDS:Rv0814c;Parent=transcript:Rv0814c;protein_id=Rv0814c ### -Chromosome ena gene 908485 909318 . - . ID=gene:Rv0815c;Name=cysA2;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase CysA2 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv0815c;logic_name=ena +Chromosome ena gene 908485 909318 . - . ID=gene:Rv0815c;Name=cysA2;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase CysA2 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv0815c;logic_name=ena Chromosome ena mRNA 908485 909318 . - . ID=transcript:Rv0815c;Parent=gene:Rv0815c;Name=cysA2-1;biotype=protein_coding;transcript_id=Rv0815c Chromosome ena exon 908485 909318 . - . Parent=transcript:Rv0815c;Name=Rv0815c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0815c-1;rank=1 Chromosome ena CDS 908485 909318 . - 0 ID=CDS:Rv0815c;Parent=transcript:Rv0815c;protein_id=Rv0815c ### -Chromosome ena gene 909611 910033 . - . ID=gene:Rv0816c;Name=thiX;biotype=protein_coding;description=Probable thioredoxin ThiX;gene_id=Rv0816c;logic_name=ena +Chromosome ena gene 909611 910033 . - . ID=gene:Rv0816c;Name=thiX;biotype=protein_coding;description=Probable thioredoxin ThiX;gene_id=Rv0816c;logic_name=ena Chromosome ena mRNA 909611 910033 . - . ID=transcript:Rv0816c;Parent=gene:Rv0816c;Name=thiX-1;biotype=protein_coding;transcript_id=Rv0816c Chromosome ena exon 909611 910033 . - . Parent=transcript:Rv0816c;Name=Rv0816c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0816c-1;rank=1 Chromosome ena CDS 909611 910033 . - 0 ID=CDS:Rv0816c;Parent=transcript:Rv0816c;protein_id=Rv0816c ### -Chromosome ena gene 910030 910842 . - . ID=gene:Rv0817c;biotype=protein_coding;description=Probable conserved exported protein;gene_id=Rv0817c;logic_name=ena +Chromosome ena gene 910030 910842 . - . ID=gene:Rv0817c;biotype=protein_coding;description=Probable conserved exported protein;gene_id=Rv0817c;logic_name=ena Chromosome ena mRNA 910030 910842 . - . ID=transcript:Rv0817c;Parent=gene:Rv0817c;biotype=protein_coding;transcript_id=Rv0817c Chromosome ena exon 910030 910842 . - . Parent=transcript:Rv0817c;Name=Rv0817c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0817c-1;rank=1 Chromosome ena CDS 910030 910842 . - 0 ID=CDS:Rv0817c;Parent=transcript:Rv0817c;protein_id=Rv0817c ### -Chromosome ena gene 910972 911739 . + . ID=gene:Rv0818;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv0818;logic_name=ena +Chromosome ena gene 910972 911739 . + . ID=gene:Rv0818;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv0818;logic_name=ena Chromosome ena mRNA 910972 911739 . + . ID=transcript:Rv0818;Parent=gene:Rv0818;biotype=protein_coding;transcript_id=Rv0818 Chromosome ena exon 910972 911739 . + . Parent=transcript:Rv0818;Name=Rv0818-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0818-1;rank=1 Chromosome ena CDS 910972 911739 . + 0 ID=CDS:Rv0818;Parent=transcript:Rv0818;protein_id=Rv0818 ### -Chromosome ena gene 911736 912683 . + . ID=gene:Rv0819;Name=mshD;biotype=protein_coding;description=GCN5-related N-acetyltransferase%2C MshD;gene_id=Rv0819;logic_name=ena +Chromosome ena gene 911736 912683 . + . ID=gene:Rv0819;Name=mshD;biotype=protein_coding;description=GCN5-related N-acetyltransferase%2C MshD;gene_id=Rv0819;logic_name=ena Chromosome ena mRNA 911736 912683 . + . ID=transcript:Rv0819;Parent=gene:Rv0819;Name=mshD-1;biotype=protein_coding;transcript_id=Rv0819 Chromosome ena exon 911736 912683 . + . Parent=transcript:Rv0819;Name=Rv0819-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0819-1;rank=1 Chromosome ena CDS 911736 912683 . + 0 ID=CDS:Rv0819;Parent=transcript:Rv0819;protein_id=Rv0819 ### -Chromosome ena gene 912726 913502 . + . ID=gene:Rv0820;Name=phoT;biotype=protein_coding;description=Probable phosphate-transport ATP-binding protein ABC transporter PhoT;gene_id=Rv0820;logic_name=ena +Chromosome ena gene 912726 913502 . + . ID=gene:Rv0820;Name=phoT;biotype=protein_coding;description=Probable phosphate-transport ATP-binding protein ABC transporter PhoT;gene_id=Rv0820;logic_name=ena Chromosome ena mRNA 912726 913502 . + . ID=transcript:Rv0820;Parent=gene:Rv0820;Name=phoT-1;biotype=protein_coding;transcript_id=Rv0820 Chromosome ena exon 912726 913502 . + . Parent=transcript:Rv0820;Name=Rv0820-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0820-1;rank=1 Chromosome ena CDS 912726 913502 . + 0 ID=CDS:Rv0820;Parent=transcript:Rv0820;protein_id=Rv0820 ### -Chromosome ena gene 913558 914199 . - . ID=gene:Rv0821c;Name=phoY2;biotype=protein_coding;description=Probable phosphate-transport system transcriptional regulatory protein PhoY2;gene_id=Rv0821c;logic_name=ena +Chromosome ena gene 913558 914199 . - . ID=gene:Rv0821c;Name=phoY2;biotype=protein_coding;description=Probable phosphate-transport system transcriptional regulatory protein PhoY2;gene_id=Rv0821c;logic_name=ena Chromosome ena mRNA 913558 914199 . - . ID=transcript:Rv0821c;Parent=gene:Rv0821c;Name=phoY2-1;biotype=protein_coding;transcript_id=Rv0821c Chromosome ena exon 913558 914199 . - . Parent=transcript:Rv0821c;Name=Rv0821c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0821c-1;rank=1 Chromosome ena CDS 913558 914199 . - 0 ID=CDS:Rv0821c;Parent=transcript:Rv0821c;protein_id=Rv0821c ### -Chromosome ena gene 914257 916311 . - . ID=gene:Rv0822c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0822c;logic_name=ena +Chromosome ena gene 914257 916311 . - . ID=gene:Rv0822c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0822c;logic_name=ena Chromosome ena mRNA 914257 916311 . - . ID=transcript:Rv0822c;Parent=gene:Rv0822c;biotype=protein_coding;transcript_id=Rv0822c Chromosome ena exon 914257 916311 . - . Parent=transcript:Rv0822c;Name=Rv0822c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0822c-1;rank=1 Chromosome ena CDS 914257 916311 . - 0 ID=CDS:Rv0822c;Parent=transcript:Rv0822c;protein_id=Rv0822c ### -Chromosome ena gene 916477 917646 . - . ID=gene:Rv0823c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0823c;logic_name=ena +Chromosome ena gene 916477 917646 . - . ID=gene:Rv0823c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0823c;logic_name=ena Chromosome ena mRNA 916477 917646 . - . ID=transcript:Rv0823c;Parent=gene:Rv0823c;biotype=protein_coding;transcript_id=Rv0823c Chromosome ena exon 916477 917646 . - . Parent=transcript:Rv0823c;Name=Rv0823c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0823c-1;rank=1 Chromosome ena CDS 916477 917646 . - 0 ID=CDS:Rv0823c;Parent=transcript:Rv0823c;protein_id=Rv0823c ### -Chromosome ena gene 917734 918750 . - . ID=gene:Rv0824c;Name=desA1;biotype=protein_coding;description=Probable acyl-[acyl-carrier protein] desaturase DesA1 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase) (protein Des);gene_id=Rv0824c;logic_name=ena +Chromosome ena gene 917734 918750 . - . ID=gene:Rv0824c;Name=desA1;biotype=protein_coding;description=Probable acyl-[acyl-carrier protein] desaturase DesA1 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase) (protein Des);gene_id=Rv0824c;logic_name=ena Chromosome ena mRNA 917734 918750 . - . ID=transcript:Rv0824c;Parent=gene:Rv0824c;Name=desA1-1;biotype=protein_coding;transcript_id=Rv0824c Chromosome ena exon 917734 918750 . - . Parent=transcript:Rv0824c;Name=Rv0824c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0824c-1;rank=1 Chromosome ena CDS 917734 918750 . - 0 ID=CDS:Rv0824c;Parent=transcript:Rv0824c;protein_id=Rv0824c @@ -4325,38 +4325,38 @@ Chromosome ena transcript 918264 918458 . + . ID=transcript:EBG00000313364;Paren Chromosome ena exon 918264 918458 . + . Parent=transcript:EBG00000313364;Name=EBG00000313364;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313364;rank=1 ### Chromosome ena_gene biological_region 918264 918458 . + . external_name=AL123456.3:gene:918264..918458;logic_name=ena_gene -Chromosome ena gene 918912 919553 . - . ID=gene:Rv0825c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0825c;logic_name=ena +Chromosome ena gene 918912 919553 . - . ID=gene:Rv0825c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0825c;logic_name=ena Chromosome ena mRNA 918912 919553 . - . ID=transcript:Rv0825c;Parent=gene:Rv0825c;biotype=protein_coding;transcript_id=Rv0825c Chromosome ena exon 918912 919553 . - . Parent=transcript:Rv0825c;Name=Rv0825c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0825c-1;rank=1 Chromosome ena CDS 918912 919553 . - 0 ID=CDS:Rv0825c;Parent=transcript:Rv0825c;protein_id=Rv0825c ### -Chromosome ena gene 919634 920689 . + . ID=gene:Rv0826;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0826;logic_name=ena +Chromosome ena gene 919634 920689 . + . ID=gene:Rv0826;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0826;logic_name=ena Chromosome ena mRNA 919634 920689 . + . ID=transcript:Rv0826;Parent=gene:Rv0826;biotype=protein_coding;transcript_id=Rv0826 Chromosome ena exon 919634 920689 . + . Parent=transcript:Rv0826;Name=Rv0826-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0826-1;rank=1 Chromosome ena CDS 919634 920689 . + 0 ID=CDS:Rv0826;Parent=transcript:Rv0826;protein_id=Rv0826 ### -Chromosome ena gene 920741 921133 . - . ID=gene:Rv0827c;Name=kmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator KmtR (ArsR-SmtB family);gene_id=Rv0827c;logic_name=ena +Chromosome ena gene 920741 921133 . - . ID=gene:Rv0827c;Name=kmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator KmtR (ArsR-SmtB family);gene_id=Rv0827c;logic_name=ena Chromosome ena mRNA 920741 921133 . - . ID=transcript:Rv0827c;Parent=gene:Rv0827c;Name=kmtR-1;biotype=protein_coding;transcript_id=Rv0827c Chromosome ena exon 920741 921133 . - . Parent=transcript:Rv0827c;Name=Rv0827c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0827c-1;rank=1 Chromosome ena CDS 920741 921133 . - 0 ID=CDS:Rv0827c;Parent=transcript:Rv0827c;protein_id=Rv0827c ### -Chromosome ena gene 921191 921613 . - . ID=gene:Rv0828c;biotype=protein_coding;description=Possible deaminase;gene_id=Rv0828c;logic_name=ena +Chromosome ena gene 921191 921613 . - . ID=gene:Rv0828c;biotype=protein_coding;description=Possible deaminase;gene_id=Rv0828c;logic_name=ena Chromosome ena mRNA 921191 921613 . - . ID=transcript:Rv0828c;Parent=gene:Rv0828c;biotype=protein_coding;transcript_id=Rv0828c Chromosome ena exon 921191 921613 . - . Parent=transcript:Rv0828c;Name=Rv0828c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0828c-1;rank=1 Chromosome ena CDS 921191 921613 . - 0 ID=CDS:Rv0828c;Parent=transcript:Rv0828c;protein_id=Rv0828c ### -Chromosome ena_mobile_element biological_region 921575 921862 . + . external_name=Rv0829%3B IS1605'%2C len: 288 nt. Insertion sequence IS1605'.;logic_name=ena_mobile_element -Chromosome ena gene 921575 921865 . + . ID=gene:Rv0829;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv0829;logic_name=ena +Chromosome ena_mobile_element biological_region 921575 921862 . + . external_name=Rv0829%3B IS1605'%2C len: 288 nt. Insertion sequence IS1605'.;logic_name=ena_mobile_element +Chromosome ena gene 921575 921865 . + . ID=gene:Rv0829;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv0829;logic_name=ena Chromosome ena mRNA 921575 921865 . + . ID=transcript:Rv0829;Parent=gene:Rv0829;biotype=protein_coding;transcript_id=Rv0829 Chromosome ena exon 921575 921865 . + . Parent=transcript:Rv0829;Name=Rv0829-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0829-1;rank=1 Chromosome ena CDS 921575 921865 . + 0 ID=CDS:Rv0829;Parent=transcript:Rv0829;protein_id=Rv0829 ### -Chromosome ena gene 921970 922875 . + . ID=gene:Rv0830;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0830;logic_name=ena +Chromosome ena gene 921970 922875 . + . ID=gene:Rv0830;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0830;logic_name=ena Chromosome ena mRNA 921970 922875 . + . ID=transcript:Rv0830;Parent=gene:Rv0830;biotype=protein_coding;transcript_id=Rv0830 Chromosome ena exon 921970 922875 . + . Parent=transcript:Rv0830;Name=Rv0830-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0830-1;rank=1 Chromosome ena CDS 921970 922875 . + 0 ID=CDS:Rv0830;Parent=transcript:Rv0830;protein_id=Rv0830 ### -Chromosome ena gene 922894 923709 . - . ID=gene:Rv0831c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0831c;logic_name=ena +Chromosome ena gene 922894 923709 . - . ID=gene:Rv0831c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0831c;logic_name=ena Chromosome ena mRNA 922894 923709 . - . ID=transcript:Rv0831c;Parent=gene:Rv0831c;biotype=protein_coding;transcript_id=Rv0831c Chromosome ena exon 922894 923709 . - . Parent=transcript:Rv0831c;Name=Rv0831c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0831c-1;rank=1 Chromosome ena CDS 922894 923709 . - 0 ID=CDS:Rv0831c;Parent=transcript:Rv0831c;protein_id=Rv0831c @@ -4381,443 +4381,443 @@ Chromosome ena transcript 924213 924286 . + . ID=transcript:EBG00000313332;Paren Chromosome ena exon 924213 924286 . + . Parent=transcript:EBG00000313332;Name=EBG00000313332;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313332;rank=1 ### Chromosome ena_gene biological_region 924213 924286 . + . external_name=AL123456.3:gene:924213..924286;logic_name=ena_gene -Chromosome ena gene 924951 925364 . + . ID=gene:Rv0832;Name=PE_PGRS12;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS12;gene_id=Rv0832;logic_name=ena +Chromosome ena gene 924951 925364 . + . ID=gene:Rv0832;Name=PE_PGRS12;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS12;gene_id=Rv0832;logic_name=ena Chromosome ena mRNA 924951 925364 . + . ID=transcript:Rv0832;Parent=gene:Rv0832;Name=PE_PGRS12-1;biotype=protein_coding;transcript_id=Rv0832 Chromosome ena exon 924951 925364 . + . Parent=transcript:Rv0832;Name=Rv0832-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0832-1;rank=1 Chromosome ena CDS 924951 925364 . + 0 ID=CDS:Rv0832;Parent=transcript:Rv0832;protein_id=Rv0832 ### -Chromosome ena gene 925361 927610 . + . ID=gene:Rv0833;Name=PE_PGRS13;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS13;gene_id=Rv0833;logic_name=ena +Chromosome ena gene 925361 927610 . + . ID=gene:Rv0833;Name=PE_PGRS13;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS13;gene_id=Rv0833;logic_name=ena Chromosome ena mRNA 925361 927610 . + . ID=transcript:Rv0833;Parent=gene:Rv0833;Name=PE_PGRS13-1;biotype=protein_coding;transcript_id=Rv0833 Chromosome ena exon 925361 927610 . + . Parent=transcript:Rv0833;Name=Rv0833-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0833-1;rank=1 Chromosome ena CDS 925361 927610 . + 0 ID=CDS:Rv0833;Parent=transcript:Rv0833;protein_id=Rv0833 ### -Chromosome ena gene 927837 930485 . - . ID=gene:Rv0834c;Name=PE_PGRS14;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS14;gene_id=Rv0834c;logic_name=ena +Chromosome ena gene 927837 930485 . - . ID=gene:Rv0834c;Name=PE_PGRS14;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS14;gene_id=Rv0834c;logic_name=ena Chromosome ena mRNA 927837 930485 . - . ID=transcript:Rv0834c;Parent=gene:Rv0834c;Name=PE_PGRS14-1;biotype=protein_coding;transcript_id=Rv0834c Chromosome ena exon 927837 930485 . - . Parent=transcript:Rv0834c;Name=Rv0834c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0834c-1;rank=1 Chromosome ena CDS 927837 930485 . - 0 ID=CDS:Rv0834c;Parent=transcript:Rv0834c;protein_id=Rv0834c ### -Chromosome ena gene 930953 931597 . + . ID=gene:Rv0835;Name=lpqQ;biotype=protein_coding;description=Possible lipoprotein LpqQ;gene_id=Rv0835;logic_name=ena +Chromosome ena gene 930953 931597 . + . ID=gene:Rv0835;Name=lpqQ;biotype=protein_coding;description=Possible lipoprotein LpqQ;gene_id=Rv0835;logic_name=ena Chromosome ena mRNA 930953 931597 . + . ID=transcript:Rv0835;Parent=gene:Rv0835;Name=lpqQ-1;biotype=protein_coding;transcript_id=Rv0835 Chromosome ena exon 930953 931597 . + . Parent=transcript:Rv0835;Name=Rv0835-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0835-1;rank=1 Chromosome ena CDS 930953 931597 . + 0 ID=CDS:Rv0835;Parent=transcript:Rv0835;protein_id=Rv0835 ### -Chromosome ena gene 932279 932932 . - . ID=gene:Rv0836c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0836c;logic_name=ena +Chromosome ena gene 932279 932932 . - . ID=gene:Rv0836c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0836c;logic_name=ena Chromosome ena mRNA 932279 932932 . - . ID=transcript:Rv0836c;Parent=gene:Rv0836c;biotype=protein_coding;transcript_id=Rv0836c Chromosome ena exon 932279 932932 . - . Parent=transcript:Rv0836c;Name=Rv0836c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0836c-1;rank=1 Chromosome ena CDS 932279 932932 . - 0 ID=CDS:Rv0836c;Parent=transcript:Rv0836c;protein_id=Rv0836c ### -Chromosome ena gene 933003 934031 . - . ID=gene:Rv0837c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0837c;logic_name=ena +Chromosome ena gene 933003 934031 . - . ID=gene:Rv0837c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0837c;logic_name=ena Chromosome ena mRNA 933003 934031 . - . ID=transcript:Rv0837c;Parent=gene:Rv0837c;biotype=protein_coding;transcript_id=Rv0837c Chromosome ena exon 933003 934031 . - . Parent=transcript:Rv0837c;Name=Rv0837c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0837c-1;rank=1 Chromosome ena CDS 933003 934031 . - 0 ID=CDS:Rv0837c;Parent=transcript:Rv0837c;protein_id=Rv0837c ### -Chromosome ena gene 934720 935490 . + . ID=gene:Rv0838;Name=lpqR;biotype=protein_coding;description=Probable conserved lipoprotein LpqR;gene_id=Rv0838;logic_name=ena +Chromosome ena gene 934720 935490 . + . ID=gene:Rv0838;Name=lpqR;biotype=protein_coding;description=Probable conserved lipoprotein LpqR;gene_id=Rv0838;logic_name=ena Chromosome ena mRNA 934720 935490 . + . ID=transcript:Rv0838;Parent=gene:Rv0838;Name=lpqR-1;biotype=protein_coding;transcript_id=Rv0838 Chromosome ena exon 934720 935490 . + . Parent=transcript:Rv0838;Name=Rv0838-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0838-1;rank=1 Chromosome ena CDS 934720 935490 . + 0 ID=CDS:Rv0838;Parent=transcript:Rv0838;protein_id=Rv0838 ### -Chromosome ena gene 935577 936389 . + . ID=gene:Rv0839;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0839;logic_name=ena +Chromosome ena gene 935577 936389 . + . ID=gene:Rv0839;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0839;logic_name=ena Chromosome ena mRNA 935577 936389 . + . ID=transcript:Rv0839;Parent=gene:Rv0839;biotype=protein_coding;transcript_id=Rv0839 Chromosome ena exon 935577 936389 . + . Parent=transcript:Rv0839;Name=Rv0839-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0839-1;rank=1 Chromosome ena CDS 935577 936389 . + 0 ID=CDS:Rv0839;Parent=transcript:Rv0839;protein_id=Rv0839 ### -Chromosome ena gene 936457 937317 . - . ID=gene:Rv0840c;Name=pip;biotype=protein_coding;description=Probable proline iminopeptidase Pip (prolyl aminopeptidase) (pap);gene_id=Rv0840c;logic_name=ena +Chromosome ena gene 936457 937317 . - . ID=gene:Rv0840c;Name=pip;biotype=protein_coding;description=Probable proline iminopeptidase Pip (prolyl aminopeptidase) (pap);gene_id=Rv0840c;logic_name=ena Chromosome ena mRNA 936457 937317 . - . ID=transcript:Rv0840c;Parent=gene:Rv0840c;Name=pip-1;biotype=protein_coding;transcript_id=Rv0840c Chromosome ena exon 936457 937317 . - . Parent=transcript:Rv0840c;Name=Rv0840c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0840c-1;rank=1 Chromosome ena CDS 936457 937317 . - 0 ID=CDS:Rv0840c;Parent=transcript:Rv0840c;protein_id=Rv0840c ### -Chromosome ena gene 937593 937835 . + . ID=gene:Rv0841;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0841;logic_name=ena +Chromosome ena gene 937593 937835 . + . ID=gene:Rv0841;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0841;logic_name=ena Chromosome ena mRNA 937593 937835 . + . ID=transcript:Rv0841;Parent=gene:Rv0841;biotype=protein_coding;transcript_id=Rv0841 Chromosome ena exon 937593 937835 . + . Parent=transcript:Rv0841;Name=Rv0841-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0841-1;rank=1 Chromosome ena CDS 937593 937835 . + 0 ID=CDS:Rv0841;Parent=transcript:Rv0841;protein_id=Rv0841 ### -Chromosome ena gene 938112 939404 . + . ID=gene:Rv0842;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0842;logic_name=ena +Chromosome ena gene 938112 939404 . + . ID=gene:Rv0842;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0842;logic_name=ena Chromosome ena mRNA 938112 939404 . + . ID=transcript:Rv0842;Parent=gene:Rv0842;biotype=protein_coding;transcript_id=Rv0842 Chromosome ena exon 938112 939404 . + . Parent=transcript:Rv0842;Name=Rv0842-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0842-1;rank=1 Chromosome ena CDS 938112 939404 . + 0 ID=CDS:Rv0842;Parent=transcript:Rv0842;protein_id=Rv0842 ### -Chromosome ena gene 939388 940392 . + . ID=gene:Rv0843;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv0843;logic_name=ena +Chromosome ena gene 939388 940392 . + . ID=gene:Rv0843;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv0843;logic_name=ena Chromosome ena mRNA 939388 940392 . + . ID=transcript:Rv0843;Parent=gene:Rv0843;biotype=protein_coding;transcript_id=Rv0843 Chromosome ena exon 939388 940392 . + . Parent=transcript:Rv0843;Name=Rv0843-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0843-1;rank=1 Chromosome ena CDS 939388 940392 . + 0 ID=CDS:Rv0843;Parent=transcript:Rv0843;protein_id=Rv0843 ### -Chromosome ena gene 940456 941106 . - . ID=gene:Rv0844c;Name=narL;biotype=protein_coding;description=Possible nitrate/nitrite response transcriptional regulatory protein NarL;gene_id=Rv0844c;logic_name=ena +Chromosome ena gene 940456 941106 . - . ID=gene:Rv0844c;Name=narL;biotype=protein_coding;description=Possible nitrate/nitrite response transcriptional regulatory protein NarL;gene_id=Rv0844c;logic_name=ena Chromosome ena mRNA 940456 941106 . - . ID=transcript:Rv0844c;Parent=gene:Rv0844c;Name=narL-1;biotype=protein_coding;transcript_id=Rv0844c Chromosome ena exon 940456 941106 . - . Parent=transcript:Rv0844c;Name=Rv0844c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0844c-1;rank=1 Chromosome ena CDS 940456 941106 . - 0 ID=CDS:Rv0844c;Parent=transcript:Rv0844c;protein_id=Rv0844c ### -Chromosome ena gene 941190 942467 . + . ID=gene:Rv0845;biotype=protein_coding;description=Possible two component sensor kinase;gene_id=Rv0845;logic_name=ena +Chromosome ena gene 941190 942467 . + . ID=gene:Rv0845;biotype=protein_coding;description=Possible two component sensor kinase;gene_id=Rv0845;logic_name=ena Chromosome ena mRNA 941190 942467 . + . ID=transcript:Rv0845;Parent=gene:Rv0845;biotype=protein_coding;transcript_id=Rv0845 Chromosome ena exon 941190 942467 . + . Parent=transcript:Rv0845;Name=Rv0845-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0845-1;rank=1 Chromosome ena CDS 941190 942467 . + 0 ID=CDS:Rv0845;Parent=transcript:Rv0845;protein_id=Rv0845 ### -Chromosome ena gene 942680 944194 . - . ID=gene:Rv0846c;biotype=protein_coding;description=Probable oxidase;gene_id=Rv0846c;logic_name=ena +Chromosome ena gene 942680 944194 . - . ID=gene:Rv0846c;biotype=protein_coding;description=Probable oxidase;gene_id=Rv0846c;logic_name=ena Chromosome ena mRNA 942680 944194 . - . ID=transcript:Rv0846c;Parent=gene:Rv0846c;biotype=protein_coding;transcript_id=Rv0846c Chromosome ena exon 942680 944194 . - . Parent=transcript:Rv0846c;Name=Rv0846c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0846c-1;rank=1 Chromosome ena CDS 942680 944194 . - 0 ID=CDS:Rv0846c;Parent=transcript:Rv0846c;protein_id=Rv0846c ### -Chromosome ena gene 944343 944735 . + . ID=gene:Rv0847;Name=lpqS;biotype=protein_coding;description=Probable lipoprotein LpqS;gene_id=Rv0847;logic_name=ena +Chromosome ena gene 944343 944735 . + . ID=gene:Rv0847;Name=lpqS;biotype=protein_coding;description=Probable lipoprotein LpqS;gene_id=Rv0847;logic_name=ena Chromosome ena mRNA 944343 944735 . + . ID=transcript:Rv0847;Parent=gene:Rv0847;Name=lpqS-1;biotype=protein_coding;transcript_id=Rv0847 Chromosome ena exon 944343 944735 . + . Parent=transcript:Rv0847;Name=Rv0847-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0847-1;rank=1 Chromosome ena CDS 944343 944735 . + 0 ID=CDS:Rv0847;Parent=transcript:Rv0847;protein_id=Rv0847 ### -Chromosome ena gene 944938 946056 . + . ID=gene:Rv0848;Name=cysK2;biotype=protein_coding;description=Possible cysteine synthase a CysK2 (O-acetylserine sulfhydrylase) (O-acetylserine (thiol)-lyase) (CSASE);gene_id=Rv0848;logic_name=ena +Chromosome ena gene 944938 946056 . + . ID=gene:Rv0848;Name=cysK2;biotype=protein_coding;description=Possible cysteine synthase a CysK2 (O-acetylserine sulfhydrylase) (O-acetylserine (thiol)-lyase) (CSASE);gene_id=Rv0848;logic_name=ena Chromosome ena mRNA 944938 946056 . + . ID=transcript:Rv0848;Parent=gene:Rv0848;Name=cysK2-1;biotype=protein_coding;transcript_id=Rv0848 Chromosome ena exon 944938 946056 . + . Parent=transcript:Rv0848;Name=Rv0848-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0848-1;rank=1 Chromosome ena CDS 944938 946056 . + 0 ID=CDS:Rv0848;Parent=transcript:Rv0848;protein_id=Rv0848 ### -Chromosome ena gene 946056 947315 . + . ID=gene:Rv0849;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv0849;logic_name=ena +Chromosome ena gene 946056 947315 . + . ID=gene:Rv0849;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv0849;logic_name=ena Chromosome ena mRNA 946056 947315 . + . ID=transcript:Rv0849;Parent=gene:Rv0849;biotype=protein_coding;transcript_id=Rv0849 Chromosome ena exon 946056 947315 . + . Parent=transcript:Rv0849;Name=Rv0849-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0849-1;rank=1 Chromosome ena CDS 946056 947315 . + 0 ID=CDS:Rv0849;Parent=transcript:Rv0849;protein_id=Rv0849 ### -Chromosome ena_mobile_element biological_region 947311 947641 . + . external_name=IS1606'%2C len: 331 nt. Insertion sequence IS1606';logic_name=ena_mobile_element -Chromosome ena gene 947312 947644 . + . ID=gene:Rv0850;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv0850;logic_name=ena +Chromosome ena_mobile_element biological_region 947311 947641 . + . external_name=IS1606'%2C len: 331 nt. Insertion sequence IS1606';logic_name=ena_mobile_element +Chromosome ena gene 947312 947644 . + . ID=gene:Rv0850;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv0850;logic_name=ena Chromosome ena mRNA 947312 947644 . + . ID=transcript:Rv0850;Parent=gene:Rv0850;biotype=protein_coding;transcript_id=Rv0850 Chromosome ena exon 947312 947644 . + . Parent=transcript:Rv0850;Name=Rv0850-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0850-1;rank=1 Chromosome ena CDS 947312 947644 . + 0 ID=CDS:Rv0850;Parent=transcript:Rv0850;protein_id=Rv0850 ### -Chromosome ena gene 947641 948468 . - . ID=gene:Rv0851c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0851c;logic_name=ena +Chromosome ena gene 947641 948468 . - . ID=gene:Rv0851c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0851c;logic_name=ena Chromosome ena mRNA 947641 948468 . - . ID=transcript:Rv0851c;Parent=gene:Rv0851c;biotype=protein_coding;transcript_id=Rv0851c Chromosome ena exon 947641 948468 . - . Parent=transcript:Rv0851c;Name=Rv0851c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0851c-1;rank=1 Chromosome ena CDS 947641 948468 . - 0 ID=CDS:Rv0851c;Parent=transcript:Rv0851c;protein_id=Rv0851c ### -Chromosome ena gene 948559 949395 . + . ID=gene:Rv0852;Name=fadD16;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD16 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0852;logic_name=ena +Chromosome ena gene 948559 949395 . + . ID=gene:Rv0852;Name=fadD16;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD16 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv0852;logic_name=ena Chromosome ena mRNA 948559 949395 . + . ID=transcript:Rv0852;Parent=gene:Rv0852;Name=fadD16-1;biotype=protein_coding;transcript_id=Rv0852 Chromosome ena exon 948559 949395 . + . Parent=transcript:Rv0852;Name=Rv0852-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0852-1;rank=1 Chromosome ena CDS 948559 949395 . + 0 ID=CDS:Rv0852;Parent=transcript:Rv0852;protein_id=Rv0852 ### -Chromosome ena gene 949436 951118 . - . ID=gene:Rv0853c;Name=pdc;biotype=protein_coding;description=Probable pyruvate or indole-3-pyruvate decarboxylase Pdc;gene_id=Rv0853c;logic_name=ena +Chromosome ena gene 949436 951118 . - . ID=gene:Rv0853c;Name=pdc;biotype=protein_coding;description=Probable pyruvate or indole-3-pyruvate decarboxylase Pdc;gene_id=Rv0853c;logic_name=ena Chromosome ena mRNA 949436 951118 . - . ID=transcript:Rv0853c;Parent=gene:Rv0853c;Name=pdc-1;biotype=protein_coding;transcript_id=Rv0853c Chromosome ena exon 949436 951118 . - . Parent=transcript:Rv0853c;Name=Rv0853c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0853c-1;rank=1 Chromosome ena CDS 949436 951118 . - 0 ID=CDS:Rv0853c;Parent=transcript:Rv0853c;protein_id=Rv0853c ### -Chromosome ena gene 951183 951626 . + . ID=gene:Rv0854;biotype=protein_coding;description=Conserved protein;gene_id=Rv0854;logic_name=ena +Chromosome ena gene 951183 951626 . + . ID=gene:Rv0854;biotype=protein_coding;description=Conserved protein;gene_id=Rv0854;logic_name=ena Chromosome ena mRNA 951183 951626 . + . ID=transcript:Rv0854;Parent=gene:Rv0854;biotype=protein_coding;transcript_id=Rv0854 Chromosome ena exon 951183 951626 . + . Parent=transcript:Rv0854;Name=Rv0854-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0854-1;rank=1 Chromosome ena CDS 951183 951626 . + 0 ID=CDS:Rv0854;Parent=transcript:Rv0854;protein_id=Rv0854 ### -Chromosome ena gene 951632 952711 . + . ID=gene:Rv0855;Name=far;biotype=protein_coding;description=Probable fatty-acid-CoA racemase Far;gene_id=Rv0855;logic_name=ena +Chromosome ena gene 951632 952711 . + . ID=gene:Rv0855;Name=far;biotype=protein_coding;description=Probable fatty-acid-CoA racemase Far;gene_id=Rv0855;logic_name=ena Chromosome ena mRNA 951632 952711 . + . ID=transcript:Rv0855;Parent=gene:Rv0855;Name=far-1;biotype=protein_coding;transcript_id=Rv0855 Chromosome ena exon 951632 952711 . + . Parent=transcript:Rv0855;Name=Rv0855-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0855-1;rank=1 Chromosome ena CDS 951632 952711 . + 0 ID=CDS:Rv0855;Parent=transcript:Rv0855;protein_id=Rv0855 ### -Chromosome ena gene 952825 953229 . + . ID=gene:Rv0856;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0856;logic_name=ena +Chromosome ena gene 952825 953229 . + . ID=gene:Rv0856;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0856;logic_name=ena Chromosome ena mRNA 952825 953229 . + . ID=transcript:Rv0856;Parent=gene:Rv0856;biotype=protein_coding;transcript_id=Rv0856 Chromosome ena exon 952825 953229 . + . Parent=transcript:Rv0856;Name=Rv0856-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0856-1;rank=1 Chromosome ena CDS 952825 953229 . + 0 ID=CDS:Rv0856;Parent=transcript:Rv0856;protein_id=Rv0856 ### -Chromosome ena gene 953257 953730 . + . ID=gene:Rv0857;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0857;logic_name=ena +Chromosome ena gene 953257 953730 . + . ID=gene:Rv0857;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0857;logic_name=ena Chromosome ena mRNA 953257 953730 . + . ID=transcript:Rv0857;Parent=gene:Rv0857;biotype=protein_coding;transcript_id=Rv0857 Chromosome ena exon 953257 953730 . + . Parent=transcript:Rv0857;Name=Rv0857-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0857-1;rank=1 Chromosome ena CDS 953257 953730 . + 0 ID=CDS:Rv0857;Parent=transcript:Rv0857;protein_id=Rv0857 ### -Chromosome ena gene 953727 954920 . - . ID=gene:Rv0858c;Name=dapC;biotype=protein_coding;description=Probable N-succinyldiaminopimelate aminotransferase DapC (DAP-at);gene_id=Rv0858c;logic_name=ena +Chromosome ena gene 953727 954920 . - . ID=gene:Rv0858c;Name=dapC;biotype=protein_coding;description=Probable N-succinyldiaminopimelate aminotransferase DapC (DAP-at);gene_id=Rv0858c;logic_name=ena Chromosome ena mRNA 953727 954920 . - . ID=transcript:Rv0858c;Parent=gene:Rv0858c;Name=dapC-1;biotype=protein_coding;transcript_id=Rv0858c Chromosome ena exon 953727 954920 . - . Parent=transcript:Rv0858c;Name=Rv0858c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0858c-1;rank=1 Chromosome ena CDS 953727 954920 . - 0 ID=CDS:Rv0858c;Parent=transcript:Rv0858c;protein_id=Rv0858c ### -Chromosome ena gene 955077 956288 . + . ID=gene:Rv0859;Name=fadA;biotype=protein_coding;description=Possible acyl-CoA thiolase FadA;gene_id=Rv0859;logic_name=ena +Chromosome ena gene 955077 956288 . + . ID=gene:Rv0859;Name=fadA;biotype=protein_coding;description=Possible acyl-CoA thiolase FadA;gene_id=Rv0859;logic_name=ena Chromosome ena mRNA 955077 956288 . + . ID=transcript:Rv0859;Parent=gene:Rv0859;Name=fadA-1;biotype=protein_coding;transcript_id=Rv0859 Chromosome ena exon 955077 956288 . + . Parent=transcript:Rv0859;Name=Rv0859-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0859-1;rank=1 Chromosome ena CDS 955077 956288 . + 0 ID=CDS:Rv0859;Parent=transcript:Rv0859;protein_id=Rv0859 ### -Chromosome ena gene 956293 958455 . + . ID=gene:Rv0860;Name=fadB;biotype=protein_coding;description=Probable fatty oxidation protein FadB;gene_id=Rv0860;logic_name=ena +Chromosome ena gene 956293 958455 . + . ID=gene:Rv0860;Name=fadB;biotype=protein_coding;description=Probable fatty oxidation protein FadB;gene_id=Rv0860;logic_name=ena Chromosome ena mRNA 956293 958455 . + . ID=transcript:Rv0860;Parent=gene:Rv0860;Name=fadB-1;biotype=protein_coding;transcript_id=Rv0860 Chromosome ena exon 956293 958455 . + . Parent=transcript:Rv0860;Name=Rv0860-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0860-1;rank=1 Chromosome ena CDS 956293 958455 . + 0 ID=CDS:Rv0860;Parent=transcript:Rv0860;protein_id=Rv0860 ### -Chromosome ena gene 958523 960151 . - . ID=gene:Rv0861c;Name=ercc3;biotype=protein_coding;description=DNA helicase Ercc3;gene_id=Rv0861c;logic_name=ena +Chromosome ena gene 958523 960151 . - . ID=gene:Rv0861c;Name=ercc3;biotype=protein_coding;description=DNA helicase Ercc3;gene_id=Rv0861c;logic_name=ena Chromosome ena mRNA 958523 960151 . - . ID=transcript:Rv0861c;Parent=gene:Rv0861c;Name=ercc3-1;biotype=protein_coding;transcript_id=Rv0861c Chromosome ena exon 958523 960151 . - . Parent=transcript:Rv0861c;Name=Rv0861c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0861c-1;rank=1 Chromosome ena CDS 958523 960151 . - 0 ID=CDS:Rv0861c;Parent=transcript:Rv0861c;protein_id=Rv0861c ### -Chromosome ena gene 960342 962612 . - . ID=gene:Rv0862c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0862c;logic_name=ena +Chromosome ena gene 960342 962612 . - . ID=gene:Rv0862c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0862c;logic_name=ena Chromosome ena mRNA 960342 962612 . - . ID=transcript:Rv0862c;Parent=gene:Rv0862c;biotype=protein_coding;transcript_id=Rv0862c Chromosome ena exon 960342 962612 . - . Parent=transcript:Rv0862c;Name=Rv0862c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0862c-1;rank=1 Chromosome ena CDS 960342 962612 . - 0 ID=CDS:Rv0862c;Parent=transcript:Rv0862c;protein_id=Rv0862c ### -Chromosome ena gene 962599 962880 . + . ID=gene:Rv0863;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0863;logic_name=ena +Chromosome ena gene 962599 962880 . + . ID=gene:Rv0863;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0863;logic_name=ena Chromosome ena mRNA 962599 962880 . + . ID=transcript:Rv0863;Parent=gene:Rv0863;biotype=protein_coding;transcript_id=Rv0863 Chromosome ena exon 962599 962880 . + . Parent=transcript:Rv0863;Name=Rv0863-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0863-1;rank=1 Chromosome ena CDS 962599 962880 . + 0 ID=CDS:Rv0863;Parent=transcript:Rv0863;protein_id=Rv0863 ### -Chromosome ena gene 962890 963393 . + . ID=gene:Rv0864;Name=moaC2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C 2 MoaC2;gene_id=Rv0864;logic_name=ena +Chromosome ena gene 962890 963393 . + . ID=gene:Rv0864;Name=moaC2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C 2 MoaC2;gene_id=Rv0864;logic_name=ena Chromosome ena mRNA 962890 963393 . + . ID=transcript:Rv0864;Parent=gene:Rv0864;Name=moaC2-1;biotype=protein_coding;transcript_id=Rv0864 Chromosome ena exon 962890 963393 . + . Parent=transcript:Rv0864;Name=Rv0864-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0864-1;rank=1 Chromosome ena CDS 962890 963393 . + 0 ID=CDS:Rv0864;Parent=transcript:Rv0864;protein_id=Rv0864 ### -Chromosome ena gene 963390 963872 . + . ID=gene:Rv0865;Name=mog;biotype=protein_coding;description=Probable molybdopterin biosynthesis Mog protein;gene_id=Rv0865;logic_name=ena +Chromosome ena gene 963390 963872 . + . ID=gene:Rv0865;Name=mog;biotype=protein_coding;description=Probable molybdopterin biosynthesis Mog protein;gene_id=Rv0865;logic_name=ena Chromosome ena mRNA 963390 963872 . + . ID=transcript:Rv0865;Parent=gene:Rv0865;Name=mog-1;biotype=protein_coding;transcript_id=Rv0865 Chromosome ena exon 963390 963872 . + . Parent=transcript:Rv0865;Name=Rv0865-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0865-1;rank=1 Chromosome ena CDS 963390 963872 . + 0 ID=CDS:Rv0865;Parent=transcript:Rv0865;protein_id=Rv0865 ### -Chromosome ena gene 963869 964294 . + . ID=gene:Rv0866;Name=moaE2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein E2 MoaE2 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor%2C subunit 2);gene_id=Rv0866;logic_name=ena +Chromosome ena gene 963869 964294 . + . ID=gene:Rv0866;Name=moaE2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein E2 MoaE2 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor%2C subunit 2);gene_id=Rv0866;logic_name=ena Chromosome ena mRNA 963869 964294 . + . ID=transcript:Rv0866;Parent=gene:Rv0866;Name=moaE2-1;biotype=protein_coding;transcript_id=Rv0866 Chromosome ena exon 963869 964294 . + . Parent=transcript:Rv0866;Name=Rv0866-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0866-1;rank=1 Chromosome ena CDS 963869 964294 . + 0 ID=CDS:Rv0866;Parent=transcript:Rv0866;protein_id=Rv0866 ### -Chromosome ena gene 964312 965535 . - . ID=gene:Rv0867c;Name=rpfA;biotype=protein_coding;description=Possible resuscitation-promoting factor RpfA;gene_id=Rv0867c;logic_name=ena +Chromosome ena gene 964312 965535 . - . ID=gene:Rv0867c;Name=rpfA;biotype=protein_coding;description=Possible resuscitation-promoting factor RpfA;gene_id=Rv0867c;logic_name=ena Chromosome ena mRNA 964312 965535 . - . ID=transcript:Rv0867c;Parent=gene:Rv0867c;Name=rpfA-1;biotype=protein_coding;transcript_id=Rv0867c Chromosome ena exon 964312 965535 . - . Parent=transcript:Rv0867c;Name=Rv0867c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0867c-1;rank=1 Chromosome ena CDS 964312 965535 . - 0 ID=CDS:Rv0867c;Parent=transcript:Rv0867c;protein_id=Rv0867c ### -Chromosome ena gene 965983 966261 . - . ID=gene:Rv0868c;Name=moaD2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein D 2 MoaD2 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor%2C subunit 1);gene_id=Rv0868c;logic_name=ena +Chromosome ena gene 965983 966261 . - . ID=gene:Rv0868c;Name=moaD2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein D 2 MoaD2 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor%2C subunit 1);gene_id=Rv0868c;logic_name=ena Chromosome ena mRNA 965983 966261 . - . ID=transcript:Rv0868c;Parent=gene:Rv0868c;Name=moaD2-1;biotype=protein_coding;transcript_id=Rv0868c Chromosome ena exon 965983 966261 . - . Parent=transcript:Rv0868c;Name=Rv0868c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0868c-1;rank=1 Chromosome ena CDS 965983 966261 . - 0 ID=CDS:Rv0868c;Parent=transcript:Rv0868c;protein_id=Rv0868c ### -Chromosome ena gene 966265 967347 . - . ID=gene:Rv0869c;Name=moaA2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein A2 MoaA2;gene_id=Rv0869c;logic_name=ena +Chromosome ena gene 966265 967347 . - . ID=gene:Rv0869c;Name=moaA2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein A2 MoaA2;gene_id=Rv0869c;logic_name=ena Chromosome ena mRNA 966265 967347 . - . ID=transcript:Rv0869c;Parent=gene:Rv0869c;Name=moaA2-1;biotype=protein_coding;transcript_id=Rv0869c Chromosome ena exon 966265 967347 . - . Parent=transcript:Rv0869c;Name=Rv0869c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0869c-1;rank=1 Chromosome ena CDS 966265 967347 . - 0 ID=CDS:Rv0869c;Parent=transcript:Rv0869c;protein_id=Rv0869c ### -Chromosome ena gene 967344 967733 . - . ID=gene:Rv0870c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv0870c;logic_name=ena +Chromosome ena gene 967344 967733 . - . ID=gene:Rv0870c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv0870c;logic_name=ena Chromosome ena mRNA 967344 967733 . - . ID=transcript:Rv0870c;Parent=gene:Rv0870c;biotype=protein_coding;transcript_id=Rv0870c Chromosome ena exon 967344 967733 . - . Parent=transcript:Rv0870c;Name=Rv0870c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0870c-1;rank=1 Chromosome ena CDS 967344 967733 . - 0 ID=CDS:Rv0870c;Parent=transcript:Rv0870c;protein_id=Rv0870c ### -Chromosome ena gene 967898 968305 . + . ID=gene:Rv0871;Name=cspB;biotype=protein_coding;description=Probable cold shock-like protein B CspB;gene_id=Rv0871;logic_name=ena +Chromosome ena gene 967898 968305 . + . ID=gene:Rv0871;Name=cspB;biotype=protein_coding;description=Probable cold shock-like protein B CspB;gene_id=Rv0871;logic_name=ena Chromosome ena mRNA 967898 968305 . + . ID=transcript:Rv0871;Parent=gene:Rv0871;Name=cspB-1;biotype=protein_coding;transcript_id=Rv0871 Chromosome ena exon 967898 968305 . + . Parent=transcript:Rv0871;Name=Rv0871-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0871-1;rank=1 Chromosome ena CDS 967898 968305 . + 0 ID=CDS:Rv0871;Parent=transcript:Rv0871;protein_id=Rv0871 ### -Chromosome ena gene 968424 970244 . - . ID=gene:Rv0872c;Name=PE_PGRS15;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS15;gene_id=Rv0872c;logic_name=ena +Chromosome ena gene 968424 970244 . - . ID=gene:Rv0872c;Name=PE_PGRS15;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS15;gene_id=Rv0872c;logic_name=ena Chromosome ena mRNA 968424 970244 . - . ID=transcript:Rv0872c;Parent=gene:Rv0872c;Name=PE_PGRS15-1;biotype=protein_coding;transcript_id=Rv0872c Chromosome ena exon 968424 970244 . - . Parent=transcript:Rv0872c;Name=Rv0872c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0872c-1;rank=1 Chromosome ena CDS 968424 970244 . - 0 ID=CDS:Rv0872c;Parent=transcript:Rv0872c;protein_id=Rv0872c ### -Chromosome ena gene 970505 972457 . + . ID=gene:Rv0873;Name=fadE10;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE10;gene_id=Rv0873;logic_name=ena +Chromosome ena gene 970505 972457 . + . ID=gene:Rv0873;Name=fadE10;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE10;gene_id=Rv0873;logic_name=ena Chromosome ena mRNA 970505 972457 . + . ID=transcript:Rv0873;Parent=gene:Rv0873;Name=fadE10-1;biotype=protein_coding;transcript_id=Rv0873 Chromosome ena exon 970505 972457 . + . Parent=transcript:Rv0873;Name=Rv0873-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0873-1;rank=1 Chromosome ena CDS 970505 972457 . + 0 ID=CDS:Rv0873;Parent=transcript:Rv0873;protein_id=Rv0873 ### -Chromosome ena gene 972546 973706 . - . ID=gene:Rv0874c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0874c;logic_name=ena +Chromosome ena gene 972546 973706 . - . ID=gene:Rv0874c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0874c;logic_name=ena Chromosome ena mRNA 972546 973706 . - . ID=transcript:Rv0874c;Parent=gene:Rv0874c;biotype=protein_coding;transcript_id=Rv0874c Chromosome ena exon 972546 973706 . - . Parent=transcript:Rv0874c;Name=Rv0874c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0874c-1;rank=1 Chromosome ena CDS 972546 973706 . - 0 ID=CDS:Rv0874c;Parent=transcript:Rv0874c;protein_id=Rv0874c ### -Chromosome ena gene 973806 974294 . - . ID=gene:Rv0875c;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0875c;logic_name=ena +Chromosome ena gene 973806 974294 . - . ID=gene:Rv0875c;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0875c;logic_name=ena Chromosome ena mRNA 973806 974294 . - . ID=transcript:Rv0875c;Parent=gene:Rv0875c;biotype=protein_coding;transcript_id=Rv0875c Chromosome ena exon 973806 974294 . - . Parent=transcript:Rv0875c;Name=Rv0875c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0875c-1;rank=1 Chromosome ena CDS 973806 974294 . - 0 ID=CDS:Rv0875c;Parent=transcript:Rv0875c;protein_id=Rv0875c ### -Chromosome ena gene 974291 975937 . - . ID=gene:Rv0876c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0876c;logic_name=ena +Chromosome ena gene 974291 975937 . - . ID=gene:Rv0876c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0876c;logic_name=ena Chromosome ena mRNA 974291 975937 . - . ID=transcript:Rv0876c;Parent=gene:Rv0876c;biotype=protein_coding;transcript_id=Rv0876c Chromosome ena exon 974291 975937 . - . Parent=transcript:Rv0876c;Name=Rv0876c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0876c-1;rank=1 Chromosome ena CDS 974291 975937 . - 0 ID=CDS:Rv0876c;Parent=transcript:Rv0876c;protein_id=Rv0876c ### -Chromosome ena gene 976075 976863 . + . ID=gene:Rv0877;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0877;logic_name=ena +Chromosome ena gene 976075 976863 . + . ID=gene:Rv0877;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0877;logic_name=ena Chromosome ena mRNA 976075 976863 . + . ID=transcript:Rv0877;Parent=gene:Rv0877;biotype=protein_coding;transcript_id=Rv0877 Chromosome ena exon 976075 976863 . + . Parent=transcript:Rv0877;Name=Rv0877-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0877-1;rank=1 Chromosome ena CDS 976075 976863 . + 0 ID=CDS:Rv0877;Parent=transcript:Rv0877;protein_id=Rv0877 ### -Chromosome ena gene 976872 978203 . - . ID=gene:Rv0878c;Name=PPE13;biotype=protein_coding;description=PPE family protein PPE13;gene_id=Rv0878c;logic_name=ena +Chromosome ena gene 976872 978203 . - . ID=gene:Rv0878c;Name=PPE13;biotype=protein_coding;description=PPE family protein PPE13;gene_id=Rv0878c;logic_name=ena Chromosome ena mRNA 976872 978203 . - . ID=transcript:Rv0878c;Parent=gene:Rv0878c;Name=PPE13-1;biotype=protein_coding;transcript_id=Rv0878c Chromosome ena exon 976872 978203 . - . Parent=transcript:Rv0878c;Name=Rv0878c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0878c-1;rank=1 Chromosome ena CDS 976872 978203 . - 0 ID=CDS:Rv0878c;Parent=transcript:Rv0878c;protein_id=Rv0878c ### -Chromosome ena gene 978481 978756 . - . ID=gene:Rv0879c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0879c;logic_name=ena +Chromosome ena gene 978481 978756 . - . ID=gene:Rv0879c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv0879c;logic_name=ena Chromosome ena mRNA 978481 978756 . - . ID=transcript:Rv0879c;Parent=gene:Rv0879c;biotype=protein_coding;transcript_id=Rv0879c Chromosome ena exon 978481 978756 . - . Parent=transcript:Rv0879c;Name=Rv0879c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0879c-1;rank=1 Chromosome ena CDS 978481 978756 . - 0 ID=CDS:Rv0879c;Parent=transcript:Rv0879c;protein_id=Rv0879c ### -Chromosome ena gene 978934 979365 . + . ID=gene:Rv0880;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly MarR-family);gene_id=Rv0880;logic_name=ena +Chromosome ena gene 978934 979365 . + . ID=gene:Rv0880;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly MarR-family);gene_id=Rv0880;logic_name=ena Chromosome ena mRNA 978934 979365 . + . ID=transcript:Rv0880;Parent=gene:Rv0880;biotype=protein_coding;transcript_id=Rv0880 Chromosome ena exon 978934 979365 . + . Parent=transcript:Rv0880;Name=Rv0880-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0880-1;rank=1 Chromosome ena CDS 978934 979365 . + 0 ID=CDS:Rv0880;Parent=transcript:Rv0880;protein_id=Rv0880 ### -Chromosome ena gene 979362 980228 . + . ID=gene:Rv0881;biotype=protein_coding;description=Possible rRNA methyltransferase (rRNA methylase);gene_id=Rv0881;logic_name=ena +Chromosome ena gene 979362 980228 . + . ID=gene:Rv0881;biotype=protein_coding;description=Possible rRNA methyltransferase (rRNA methylase);gene_id=Rv0881;logic_name=ena Chromosome ena mRNA 979362 980228 . + . ID=transcript:Rv0881;Parent=gene:Rv0881;biotype=protein_coding;transcript_id=Rv0881 Chromosome ena exon 979362 980228 . + . Parent=transcript:Rv0881;Name=Rv0881-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0881-1;rank=1 Chromosome ena CDS 979362 980228 . + 0 ID=CDS:Rv0881;Parent=transcript:Rv0881;protein_id=Rv0881 ### -Chromosome ena gene 980225 980509 . + . ID=gene:Rv0882;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv0882;logic_name=ena +Chromosome ena gene 980225 980509 . + . ID=gene:Rv0882;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv0882;logic_name=ena Chromosome ena mRNA 980225 980509 . + . ID=transcript:Rv0882;Parent=gene:Rv0882;biotype=protein_coding;transcript_id=Rv0882 Chromosome ena exon 980225 980509 . + . Parent=transcript:Rv0882;Name=Rv0882-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0882-1;rank=1 Chromosome ena CDS 980225 980509 . + 0 ID=CDS:Rv0882;Parent=transcript:Rv0882;protein_id=Rv0882 ### -Chromosome ena gene 980506 981267 . - . ID=gene:Rv0883c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0883c;logic_name=ena +Chromosome ena gene 980506 981267 . - . ID=gene:Rv0883c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0883c;logic_name=ena Chromosome ena mRNA 980506 981267 . - . ID=transcript:Rv0883c;Parent=gene:Rv0883c;biotype=protein_coding;transcript_id=Rv0883c Chromosome ena exon 980506 981267 . - . Parent=transcript:Rv0883c;Name=Rv0883c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0883c-1;rank=1 Chromosome ena CDS 980506 981267 . - 0 ID=CDS:Rv0883c;Parent=transcript:Rv0883c;protein_id=Rv0883c ### -Chromosome ena gene 981424 982554 . - . ID=gene:Rv0884c;Name=serC;biotype=protein_coding;description=Possible phosphoserine aminotransferase SerC (PSAT);gene_id=Rv0884c;logic_name=ena +Chromosome ena gene 981424 982554 . - . ID=gene:Rv0884c;Name=serC;biotype=protein_coding;description=Possible phosphoserine aminotransferase SerC (PSAT);gene_id=Rv0884c;logic_name=ena Chromosome ena mRNA 981424 982554 . - . ID=transcript:Rv0884c;Parent=gene:Rv0884c;Name=serC-1;biotype=protein_coding;transcript_id=Rv0884c Chromosome ena exon 981424 982554 . - . Parent=transcript:Rv0884c;Name=Rv0884c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0884c-1;rank=1 Chromosome ena CDS 981424 982554 . - 0 ID=CDS:Rv0884c;Parent=transcript:Rv0884c;protein_id=Rv0884c ### -Chromosome ena gene 982762 983784 . + . ID=gene:Rv0885;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0885;logic_name=ena +Chromosome ena gene 982762 983784 . + . ID=gene:Rv0885;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0885;logic_name=ena Chromosome ena mRNA 982762 983784 . + . ID=transcript:Rv0885;Parent=gene:Rv0885;biotype=protein_coding;transcript_id=Rv0885 Chromosome ena exon 982762 983784 . + . Parent=transcript:Rv0885;Name=Rv0885-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0885-1;rank=1 Chromosome ena CDS 982762 983784 . + 0 ID=CDS:Rv0885;Parent=transcript:Rv0885;protein_id=Rv0885 ### -Chromosome ena gene 983803 985530 . + . ID=gene:Rv0886;Name=fprB;biotype=protein_coding;description=Probable NADPH:adrenodoxin oxidoreductase FprB (adrenodoxin reductase) (AR) (ferredoxin-NADP(+) reductase);gene_id=Rv0886;logic_name=ena +Chromosome ena gene 983803 985530 . + . ID=gene:Rv0886;Name=fprB;biotype=protein_coding;description=Probable NADPH:adrenodoxin oxidoreductase FprB (adrenodoxin reductase) (AR) (ferredoxin-NADP(+) reductase);gene_id=Rv0886;logic_name=ena Chromosome ena mRNA 983803 985530 . + . ID=transcript:Rv0886;Parent=gene:Rv0886;Name=fprB-1;biotype=protein_coding;transcript_id=Rv0886 Chromosome ena exon 983803 985530 . + . Parent=transcript:Rv0886;Name=Rv0886-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0886-1;rank=1 Chromosome ena CDS 983803 985530 . + 0 ID=CDS:Rv0886;Parent=transcript:Rv0886;protein_id=Rv0886 ### -Chromosome ena gene 985513 985971 . - . ID=gene:Rv0887c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0887c;logic_name=ena +Chromosome ena gene 985513 985971 . - . ID=gene:Rv0887c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0887c;logic_name=ena Chromosome ena mRNA 985513 985971 . - . ID=transcript:Rv0887c;Parent=gene:Rv0887c;biotype=protein_coding;transcript_id=Rv0887c Chromosome ena exon 985513 985971 . - . Parent=transcript:Rv0887c;Name=Rv0887c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0887c-1;rank=1 Chromosome ena CDS 985513 985971 . - 0 ID=CDS:Rv0887c;Parent=transcript:Rv0887c;protein_id=Rv0887c ### -Chromosome ena gene 987233 988705 . + . ID=gene:Rv0888;biotype=protein_coding;description=Probable exported protein;gene_id=Rv0888;logic_name=ena +Chromosome ena gene 987233 988705 . + . ID=gene:Rv0888;biotype=protein_coding;description=Probable exported protein;gene_id=Rv0888;logic_name=ena Chromosome ena mRNA 987233 988705 . + . ID=transcript:Rv0888;Parent=gene:Rv0888;biotype=protein_coding;transcript_id=Rv0888 Chromosome ena exon 987233 988705 . + . Parent=transcript:Rv0888;Name=Rv0888-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0888-1;rank=1 Chromosome ena CDS 987233 988705 . + 0 ID=CDS:Rv0888;Parent=transcript:Rv0888;protein_id=Rv0888 ### -Chromosome ena gene 988740 989861 . - . ID=gene:Rv0889c;Name=citA;biotype=protein_coding;description=Probable citrate synthase II CitA;gene_id=Rv0889c;logic_name=ena +Chromosome ena gene 988740 989861 . - . ID=gene:Rv0889c;Name=citA;biotype=protein_coding;description=Probable citrate synthase II CitA;gene_id=Rv0889c;logic_name=ena Chromosome ena mRNA 988740 989861 . - . ID=transcript:Rv0889c;Parent=gene:Rv0889c;Name=citA-1;biotype=protein_coding;transcript_id=Rv0889c Chromosome ena exon 988740 989861 . - . Parent=transcript:Rv0889c;Name=Rv0889c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0889c-1;rank=1 Chromosome ena CDS 988740 989861 . - 0 ID=CDS:Rv0889c;Parent=transcript:Rv0889c;protein_id=Rv0889c ### -Chromosome ena gene 989948 992596 . - . ID=gene:Rv0890c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LuxR-family);gene_id=Rv0890c;logic_name=ena +Chromosome ena gene 989948 992596 . - . ID=gene:Rv0890c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LuxR-family);gene_id=Rv0890c;logic_name=ena Chromosome ena mRNA 989948 992596 . - . ID=transcript:Rv0890c;Parent=gene:Rv0890c;biotype=protein_coding;transcript_id=Rv0890c Chromosome ena exon 989948 992596 . - . Parent=transcript:Rv0890c;Name=Rv0890c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0890c-1;rank=1 Chromosome ena CDS 989948 992596 . - 0 ID=CDS:Rv0890c;Parent=transcript:Rv0890c;protein_id=Rv0890c ### -Chromosome ena gene 992598 993455 . - . ID=gene:Rv0891c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0891c;logic_name=ena +Chromosome ena gene 992598 993455 . - . ID=gene:Rv0891c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv0891c;logic_name=ena Chromosome ena mRNA 992598 993455 . - . ID=transcript:Rv0891c;Parent=gene:Rv0891c;biotype=protein_coding;transcript_id=Rv0891c Chromosome ena exon 992598 993455 . - . Parent=transcript:Rv0891c;Name=Rv0891c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0891c-1;rank=1 Chromosome ena CDS 992598 993455 . - 0 ID=CDS:Rv0891c;Parent=transcript:Rv0891c;protein_id=Rv0891c ### -Chromosome ena gene 993853 995340 . + . ID=gene:Rv0892;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0892;logic_name=ena +Chromosome ena gene 993853 995340 . + . ID=gene:Rv0892;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0892;logic_name=ena Chromosome ena mRNA 993853 995340 . + . ID=transcript:Rv0892;Parent=gene:Rv0892;biotype=protein_coding;transcript_id=Rv0892 Chromosome ena exon 993853 995340 . + . Parent=transcript:Rv0892;Name=Rv0892-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0892-1;rank=1 Chromosome ena CDS 993853 995340 . + 0 ID=CDS:Rv0892;Parent=transcript:Rv0892;protein_id=Rv0892 ### -Chromosome ena gene 995318 996295 . - . ID=gene:Rv0893c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0893c;logic_name=ena +Chromosome ena gene 995318 996295 . - . ID=gene:Rv0893c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv0893c;logic_name=ena Chromosome ena mRNA 995318 996295 . - . ID=transcript:Rv0893c;Parent=gene:Rv0893c;biotype=protein_coding;transcript_id=Rv0893c Chromosome ena exon 995318 996295 . - . Parent=transcript:Rv0893c;Name=Rv0893c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0893c-1;rank=1 Chromosome ena CDS 995318 996295 . - 0 ID=CDS:Rv0893c;Parent=transcript:Rv0893c;protein_id=Rv0893c ### -Chromosome ena gene 996524 997705 . + . ID=gene:Rv0894;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly LuxR-family);gene_id=Rv0894;logic_name=ena +Chromosome ena gene 996524 997705 . + . ID=gene:Rv0894;biotype=protein_coding;description=Possible transcriptional regulatory protein (possibly LuxR-family);gene_id=Rv0894;logic_name=ena Chromosome ena mRNA 996524 997705 . + . ID=transcript:Rv0894;Parent=gene:Rv0894;biotype=protein_coding;transcript_id=Rv0894 Chromosome ena exon 996524 997705 . + . Parent=transcript:Rv0894;Name=Rv0894-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0894-1;rank=1 Chromosome ena CDS 996524 997705 . + 0 ID=CDS:Rv0894;Parent=transcript:Rv0894;protein_id=Rv0894 ### -Chromosome ena gene 997782 999299 . + . ID=gene:Rv0895;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv0895;logic_name=ena +Chromosome ena gene 997782 999299 . + . ID=gene:Rv0895;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv0895;logic_name=ena Chromosome ena mRNA 997782 999299 . + . ID=transcript:Rv0895;Parent=gene:Rv0895;biotype=protein_coding;transcript_id=Rv0895 Chromosome ena exon 997782 999299 . + . Parent=transcript:Rv0895;Name=Rv0895-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0895-1;rank=1 Chromosome ena CDS 997782 999299 . + 0 ID=CDS:Rv0895;Parent=transcript:Rv0895;protein_id=Rv0895 ### -Chromosome ena gene 999472 1000767 . + . ID=gene:Rv0896;Name=gltA2;biotype=protein_coding;description=Probable citrate synthase I GltA2;gene_id=Rv0896;logic_name=ena +Chromosome ena gene 999472 1000767 . + . ID=gene:Rv0896;Name=gltA2;biotype=protein_coding;description=Probable citrate synthase I GltA2;gene_id=Rv0896;logic_name=ena Chromosome ena mRNA 999472 1000767 . + . ID=transcript:Rv0896;Parent=gene:Rv0896;Name=gltA2-1;biotype=protein_coding;transcript_id=Rv0896 Chromosome ena exon 999472 1000767 . + . Parent=transcript:Rv0896;Name=Rv0896-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0896-1;rank=1 Chromosome ena CDS 999472 1000767 . + 0 ID=CDS:Rv0896;Parent=transcript:Rv0896;protein_id=Rv0896 ### -Chromosome ena gene 1000808 1002415 . - . ID=gene:Rv0897c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0897c;logic_name=ena +Chromosome ena gene 1000808 1002415 . - . ID=gene:Rv0897c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv0897c;logic_name=ena Chromosome ena mRNA 1000808 1002415 . - . ID=transcript:Rv0897c;Parent=gene:Rv0897c;biotype=protein_coding;transcript_id=Rv0897c Chromosome ena exon 1000808 1002415 . - . Parent=transcript:Rv0897c;Name=Rv0897c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0897c-1;rank=1 Chromosome ena CDS 1000808 1002415 . - 0 ID=CDS:Rv0897c;Parent=transcript:Rv0897c;protein_id=Rv0897c ### -Chromosome ena gene 1002441 1002704 . - . ID=gene:Rv0898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0898c;logic_name=ena +Chromosome ena gene 1002441 1002704 . - . ID=gene:Rv0898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0898c;logic_name=ena Chromosome ena mRNA 1002441 1002704 . - . ID=transcript:Rv0898c;Parent=gene:Rv0898c;biotype=protein_coding;transcript_id=Rv0898c Chromosome ena exon 1002441 1002704 . - . Parent=transcript:Rv0898c;Name=Rv0898c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0898c-1;rank=1 Chromosome ena CDS 1002441 1002704 . - 0 ID=CDS:Rv0898c;Parent=transcript:Rv0898c;protein_id=Rv0898c ### -Chromosome ena gene 1002812 1003792 . + . ID=gene:Rv0899;Name=ompA;biotype=protein_coding;description=Outer membrane protein A OmpA;gene_id=Rv0899;logic_name=ena +Chromosome ena gene 1002812 1003792 . + . ID=gene:Rv0899;Name=ompA;biotype=protein_coding;description=Outer membrane protein A OmpA;gene_id=Rv0899;logic_name=ena Chromosome ena mRNA 1002812 1003792 . + . ID=transcript:Rv0899;Parent=gene:Rv0899;Name=ompA-1;biotype=protein_coding;transcript_id=Rv0899 Chromosome ena exon 1002812 1003792 . + . Parent=transcript:Rv0899;Name=Rv0899-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0899-1;rank=1 Chromosome ena CDS 1002812 1003792 . + 0 ID=CDS:Rv0899;Parent=transcript:Rv0899;protein_id=Rv0899 ### -Chromosome ena gene 1003805 1003957 . + . ID=gene:Rv0900;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0900;logic_name=ena +Chromosome ena gene 1003805 1003957 . + . ID=gene:Rv0900;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv0900;logic_name=ena Chromosome ena mRNA 1003805 1003957 . + . ID=transcript:Rv0900;Parent=gene:Rv0900;biotype=protein_coding;transcript_id=Rv0900 Chromosome ena exon 1003805 1003957 . + . Parent=transcript:Rv0900;Name=Rv0900-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0900-1;rank=1 Chromosome ena CDS 1003805 1003957 . + 0 ID=CDS:Rv0900;Parent=transcript:Rv0900;protein_id=Rv0900 ### -Chromosome ena gene 1003957 1004484 . + . ID=gene:Rv0901;biotype=protein_coding;description=Possible conserved exported or membrane protein;gene_id=Rv0901;logic_name=ena +Chromosome ena gene 1003957 1004484 . + . ID=gene:Rv0901;biotype=protein_coding;description=Possible conserved exported or membrane protein;gene_id=Rv0901;logic_name=ena Chromosome ena mRNA 1003957 1004484 . + . ID=transcript:Rv0901;Parent=gene:Rv0901;biotype=protein_coding;transcript_id=Rv0901 Chromosome ena exon 1003957 1004484 . + . Parent=transcript:Rv0901;Name=Rv0901-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0901-1;rank=1 Chromosome ena CDS 1003957 1004484 . + 0 ID=CDS:Rv0901;Parent=transcript:Rv0901;protein_id=Rv0901 ### -Chromosome ena gene 1004501 1005841 . - . ID=gene:Rv0902c;Name=prrB;biotype=protein_coding;description=Two component sensor histidine kinase PrrB;gene_id=Rv0902c;logic_name=ena +Chromosome ena gene 1004501 1005841 . - . ID=gene:Rv0902c;Name=prrB;biotype=protein_coding;description=Two component sensor histidine kinase PrrB;gene_id=Rv0902c;logic_name=ena Chromosome ena mRNA 1004501 1005841 . - . ID=transcript:Rv0902c;Parent=gene:Rv0902c;Name=prrB-1;biotype=protein_coding;transcript_id=Rv0902c Chromosome ena exon 1004501 1005841 . - . Parent=transcript:Rv0902c;Name=Rv0902c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0902c-1;rank=1 Chromosome ena CDS 1004501 1005841 . - 0 ID=CDS:Rv0902c;Parent=transcript:Rv0902c;protein_id=Rv0902c ### -Chromosome ena gene 1005852 1006562 . - . ID=gene:Rv0903c;Name=prrA;biotype=protein_coding;description=Two component response transcriptional regulatory protein PrrA;gene_id=Rv0903c;logic_name=ena +Chromosome ena gene 1005852 1006562 . - . ID=gene:Rv0903c;Name=prrA;biotype=protein_coding;description=Two component response transcriptional regulatory protein PrrA;gene_id=Rv0903c;logic_name=ena Chromosome ena mRNA 1005852 1006562 . - . ID=transcript:Rv0903c;Parent=gene:Rv0903c;Name=prrA-1;biotype=protein_coding;transcript_id=Rv0903c Chromosome ena exon 1005852 1006562 . - . Parent=transcript:Rv0903c;Name=Rv0903c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0903c-1;rank=1 Chromosome ena CDS 1005852 1006562 . - 0 ID=CDS:Rv0903c;Parent=transcript:Rv0903c;protein_id=Rv0903c ### -Chromosome ena gene 1006693 1008180 . - . ID=gene:Rv0904c;Name=accD3;biotype=protein_coding;description=Putative acetyl-coenzyme A carboxylase carboxyl transferase (subunit beta) AccD3 (accase beta chain);gene_id=Rv0904c;logic_name=ena +Chromosome ena gene 1006693 1008180 . - . ID=gene:Rv0904c;Name=accD3;biotype=protein_coding;description=Putative acetyl-coenzyme A carboxylase carboxyl transferase (subunit beta) AccD3 (accase beta chain);gene_id=Rv0904c;logic_name=ena Chromosome ena mRNA 1006693 1008180 . - . ID=transcript:Rv0904c;Parent=gene:Rv0904c;Name=accD3-1;biotype=protein_coding;transcript_id=Rv0904c Chromosome ena exon 1006693 1008180 . - . Parent=transcript:Rv0904c;Name=Rv0904c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0904c-1;rank=1 Chromosome ena CDS 1006693 1008180 . - 0 ID=CDS:Rv0904c;Parent=transcript:Rv0904c;protein_id=Rv0904c ### -Chromosome ena gene 1008207 1008938 . + . ID=gene:Rv0905;Name=echA6;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA6 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0905;logic_name=ena +Chromosome ena gene 1008207 1008938 . + . ID=gene:Rv0905;Name=echA6;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA6 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0905;logic_name=ena Chromosome ena mRNA 1008207 1008938 . + . ID=transcript:Rv0905;Parent=gene:Rv0905;Name=echA6-1;biotype=protein_coding;transcript_id=Rv0905 Chromosome ena exon 1008207 1008938 . + . Parent=transcript:Rv0905;Name=Rv0905-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0905-1;rank=1 Chromosome ena CDS 1008207 1008938 . + 0 ID=CDS:Rv0905;Parent=transcript:Rv0905;protein_id=Rv0905 ### -Chromosome ena gene 1008944 1010062 . + . ID=gene:Rv0906;biotype=protein_coding;description=Conserved protein;gene_id=Rv0906;logic_name=ena +Chromosome ena gene 1008944 1010062 . + . ID=gene:Rv0906;biotype=protein_coding;description=Conserved protein;gene_id=Rv0906;logic_name=ena Chromosome ena mRNA 1008944 1010062 . + . ID=transcript:Rv0906;Parent=gene:Rv0906;biotype=protein_coding;transcript_id=Rv0906 Chromosome ena exon 1008944 1010062 . + . Parent=transcript:Rv0906;Name=Rv0906-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0906-1;rank=1 Chromosome ena CDS 1008944 1010062 . + 0 ID=CDS:Rv0906;Parent=transcript:Rv0906;protein_id=Rv0906 ### -Chromosome ena gene 1010136 1011734 . + . ID=gene:Rv0907;biotype=protein_coding;description=Conserved protein;gene_id=Rv0907;logic_name=ena +Chromosome ena gene 1010136 1011734 . + . ID=gene:Rv0907;biotype=protein_coding;description=Conserved protein;gene_id=Rv0907;logic_name=ena Chromosome ena mRNA 1010136 1011734 . + . ID=transcript:Rv0907;Parent=gene:Rv0907;biotype=protein_coding;transcript_id=Rv0907 Chromosome ena exon 1010136 1011734 . + . Parent=transcript:Rv0907;Name=Rv0907-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0907-1;rank=1 Chromosome ena CDS 1010136 1011734 . + 0 ID=CDS:Rv0907;Parent=transcript:Rv0907;protein_id=Rv0907 ### -Chromosome ena gene 1011731 1014124 . + . ID=gene:Rv0908;Name=ctpE;biotype=protein_coding;description=Probable metal cation transporter ATPase P-type CtpE;gene_id=Rv0908;logic_name=ena +Chromosome ena gene 1011731 1014124 . + . ID=gene:Rv0908;Name=ctpE;biotype=protein_coding;description=Probable metal cation transporter ATPase P-type CtpE;gene_id=Rv0908;logic_name=ena Chromosome ena mRNA 1011731 1014124 . + . ID=transcript:Rv0908;Parent=gene:Rv0908;Name=ctpE-1;biotype=protein_coding;transcript_id=Rv0908 Chromosome ena exon 1011731 1014124 . + . Parent=transcript:Rv0908;Name=Rv0908-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0908-1;rank=1 Chromosome ena CDS 1011731 1014124 . + 0 ID=CDS:Rv0908;Parent=transcript:Rv0908;protein_id=Rv0908 ### -Chromosome ena gene 1014681 1014860 . + . ID=gene:Rv0909;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0909;logic_name=ena +Chromosome ena gene 1014681 1014860 . + . ID=gene:Rv0909;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0909;logic_name=ena Chromosome ena mRNA 1014681 1014860 . + . ID=transcript:Rv0909;Parent=gene:Rv0909;biotype=protein_coding;transcript_id=Rv0909 Chromosome ena exon 1014681 1014860 . + . Parent=transcript:Rv0909;Name=Rv0909-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0909-1;rank=1 Chromosome ena CDS 1014681 1014860 . + 0 ID=CDS:Rv0909;Parent=transcript:Rv0909;protein_id=Rv0909 ### -Chromosome ena gene 1014866 1015300 . + . ID=gene:Rv0910;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0910;logic_name=ena +Chromosome ena gene 1014866 1015300 . + . ID=gene:Rv0910;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0910;logic_name=ena Chromosome ena mRNA 1014866 1015300 . + . ID=transcript:Rv0910;Parent=gene:Rv0910;biotype=protein_coding;transcript_id=Rv0910 Chromosome ena exon 1014866 1015300 . + . Parent=transcript:Rv0910;Name=Rv0910-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0910-1;rank=1 Chromosome ena CDS 1014866 1015300 . + 0 ID=CDS:Rv0910;Parent=transcript:Rv0910;protein_id=Rv0910 ### -Chromosome ena gene 1015398 1016171 . + . ID=gene:Rv0911;biotype=protein_coding;description=Conserved protein;gene_id=Rv0911;logic_name=ena +Chromosome ena gene 1015398 1016171 . + . ID=gene:Rv0911;biotype=protein_coding;description=Conserved protein;gene_id=Rv0911;logic_name=ena Chromosome ena mRNA 1015398 1016171 . + . ID=transcript:Rv0911;Parent=gene:Rv0911;biotype=protein_coding;transcript_id=Rv0911 Chromosome ena exon 1015398 1016171 . + . Parent=transcript:Rv0911;Name=Rv0911-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0911-1;rank=1 Chromosome ena CDS 1015398 1016171 . + 0 ID=CDS:Rv0911;Parent=transcript:Rv0911;protein_id=Rv0911 ### -Chromosome ena gene 1016236 1016685 . + . ID=gene:Rv0912;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0912;logic_name=ena +Chromosome ena gene 1016236 1016685 . + . ID=gene:Rv0912;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0912;logic_name=ena Chromosome ena mRNA 1016236 1016685 . + . ID=transcript:Rv0912;Parent=gene:Rv0912;biotype=protein_coding;transcript_id=Rv0912 Chromosome ena exon 1016236 1016685 . + . Parent=transcript:Rv0912;Name=Rv0912-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0912-1;rank=1 Chromosome ena CDS 1016236 1016685 . + 0 ID=CDS:Rv0912;Parent=transcript:Rv0912;protein_id=Rv0912 ### -Chromosome ena gene 1017217 1018725 . - . ID=gene:Rv0913c;biotype=protein_coding;description=Possible dioxygenase;gene_id=Rv0913c;logic_name=ena +Chromosome ena gene 1017217 1018725 . - . ID=gene:Rv0913c;biotype=protein_coding;description=Possible dioxygenase;gene_id=Rv0913c;logic_name=ena Chromosome ena mRNA 1017217 1018725 . - . ID=transcript:Rv0913c;Parent=gene:Rv0913c;biotype=protein_coding;transcript_id=Rv0913c Chromosome ena exon 1017217 1018725 . - . Parent=transcript:Rv0913c;Name=Rv0913c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0913c-1;rank=1 Chromosome ena CDS 1017217 1018725 . - 0 ID=CDS:Rv0913c;Parent=transcript:Rv0913c;protein_id=Rv0913c ### -Chromosome ena gene 1018727 1019965 . - . ID=gene:Rv0914c;biotype=protein_coding;description=Possible lipid carrier protein or keto acyl-CoA thiolase;gene_id=Rv0914c;logic_name=ena +Chromosome ena gene 1018727 1019965 . - . ID=gene:Rv0914c;biotype=protein_coding;description=Possible lipid carrier protein or keto acyl-CoA thiolase;gene_id=Rv0914c;logic_name=ena Chromosome ena mRNA 1018727 1019965 . - . ID=transcript:Rv0914c;Parent=gene:Rv0914c;biotype=protein_coding;transcript_id=Rv0914c Chromosome ena exon 1018727 1019965 . - . Parent=transcript:Rv0914c;Name=Rv0914c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0914c-1;rank=1 Chromosome ena CDS 1018727 1019965 . - 0 ID=CDS:Rv0914c;Parent=transcript:Rv0914c;protein_id=Rv0914c ### -Chromosome ena gene 1020058 1021329 . - . ID=gene:Rv0915c;Name=PPE14;biotype=protein_coding;description=PPE family protein PPE14;gene_id=Rv0915c;logic_name=ena +Chromosome ena gene 1020058 1021329 . - . ID=gene:Rv0915c;Name=PPE14;biotype=protein_coding;description=PPE family protein PPE14;gene_id=Rv0915c;logic_name=ena Chromosome ena mRNA 1020058 1021329 . - . ID=transcript:Rv0915c;Parent=gene:Rv0915c;Name=PPE14-1;biotype=protein_coding;transcript_id=Rv0915c Chromosome ena exon 1020058 1021329 . - . Parent=transcript:Rv0915c;Name=Rv0915c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0915c-1;rank=1 Chromosome ena CDS 1020058 1021329 . - 0 ID=CDS:Rv0915c;Parent=transcript:Rv0915c;protein_id=Rv0915c ### -Chromosome ena gene 1021344 1021643 . - . ID=gene:Rv0916c;Name=PE7;biotype=protein_coding;description=PE family protein PE7;gene_id=Rv0916c;logic_name=ena +Chromosome ena gene 1021344 1021643 . - . ID=gene:Rv0916c;Name=PE7;biotype=protein_coding;description=PE family protein PE7;gene_id=Rv0916c;logic_name=ena Chromosome ena mRNA 1021344 1021643 . - . ID=transcript:Rv0916c;Parent=gene:Rv0916c;Name=PE7-1;biotype=protein_coding;transcript_id=Rv0916c Chromosome ena exon 1021344 1021643 . - . Parent=transcript:Rv0916c;Name=Rv0916c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0916c-1;rank=1 Chromosome ena CDS 1021344 1021643 . - 0 ID=CDS:Rv0916c;Parent=transcript:Rv0916c;protein_id=Rv0916c ### -Chromosome ena gene 1022087 1023868 . + . ID=gene:Rv0917;Name=betP;biotype=protein_coding;description=Possible glycine betaine transport integral membrane protein BetP;gene_id=Rv0917;logic_name=ena +Chromosome ena gene 1022087 1023868 . + . ID=gene:Rv0917;Name=betP;biotype=protein_coding;description=Possible glycine betaine transport integral membrane protein BetP;gene_id=Rv0917;logic_name=ena Chromosome ena mRNA 1022087 1023868 . + . ID=transcript:Rv0917;Parent=gene:Rv0917;Name=betP-1;biotype=protein_coding;transcript_id=Rv0917 Chromosome ena exon 1022087 1023868 . + . Parent=transcript:Rv0917;Name=Rv0917-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0917-1;rank=1 Chromosome ena CDS 1022087 1023868 . + 0 ID=CDS:Rv0917;Parent=transcript:Rv0917;protein_id=Rv0917 ### -Chromosome ena gene 1024211 1024687 . + . ID=gene:Rv0918;biotype=protein_coding;description=Conserved protein;gene_id=Rv0918;logic_name=ena +Chromosome ena gene 1024211 1024687 . + . ID=gene:Rv0918;biotype=protein_coding;description=Conserved protein;gene_id=Rv0918;logic_name=ena Chromosome ena mRNA 1024211 1024687 . + . ID=transcript:Rv0918;Parent=gene:Rv0918;biotype=protein_coding;transcript_id=Rv0918 Chromosome ena exon 1024211 1024687 . + . Parent=transcript:Rv0918;Name=Rv0918-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0918-1;rank=1 Chromosome ena CDS 1024211 1024687 . + 0 ID=CDS:Rv0918;Parent=transcript:Rv0918;protein_id=Rv0918 ### -Chromosome ena gene 1024684 1025184 . + . ID=gene:Rv0919;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0919;logic_name=ena +Chromosome ena gene 1024684 1025184 . + . ID=gene:Rv0919;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv0919;logic_name=ena Chromosome ena mRNA 1024684 1025184 . + . ID=transcript:Rv0919;Parent=gene:Rv0919;biotype=protein_coding;transcript_id=Rv0919 Chromosome ena exon 1024684 1025184 . + . Parent=transcript:Rv0919;Name=Rv0919-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0919-1;rank=1 Chromosome ena CDS 1024684 1025184 . + 0 ID=CDS:Rv0919;Parent=transcript:Rv0919;protein_id=Rv0919 @@ -4827,398 +4827,398 @@ Chromosome ena transcript 1025321 1025393 . - . ID=transcript:EBG00000313359;Par Chromosome ena exon 1025321 1025393 . - . Parent=transcript:EBG00000313359;Name=EBG00000313359;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313359;rank=1 ### Chromosome ena_gene biological_region 1025321 1025393 . - . external_name=AL123456.3:gene:complement(1025321..1025393);logic_name=ena_gene -Chromosome ena_mobile_element biological_region 1025458 1026893 . - . external_name=IS1554%2C len: 1436 nt. Putative Insertion sequence element bounded by 15 bp inverted repeats.;logic_name=ena_mobile_element -Chromosome ena gene 1025497 1026816 . - . ID=gene:Rv0920c;biotype=protein_coding;description=Probable transposase;gene_id=Rv0920c;logic_name=ena +Chromosome ena_mobile_element biological_region 1025458 1026893 . - . external_name=IS1554%2C len: 1436 nt. Putative Insertion sequence element bounded by 15 bp inverted repeats.;logic_name=ena_mobile_element +Chromosome ena gene 1025497 1026816 . - . ID=gene:Rv0920c;biotype=protein_coding;description=Probable transposase;gene_id=Rv0920c;logic_name=ena Chromosome ena mRNA 1025497 1026816 . - . ID=transcript:Rv0920c;Parent=gene:Rv0920c;biotype=protein_coding;transcript_id=Rv0920c Chromosome ena exon 1025497 1026816 . - . Parent=transcript:Rv0920c;Name=Rv0920c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0920c-1;rank=1 Chromosome ena CDS 1025497 1026816 . - 0 ID=CDS:Rv0920c;Parent=transcript:Rv0920c;protein_id=Rv0920c ### -Chromosome ena_mobile_element biological_region 1027061 1029360 . + . external_name=IS1535%2C len: 2300 nt. Putative Insertion sequence element bounded by 16 bp inverted repeats.;logic_name=ena_mobile_element -Chromosome ena gene 1027104 1027685 . + . ID=gene:Rv0921;biotype=protein_coding;description=Possible resolvase;gene_id=Rv0921;logic_name=ena +Chromosome ena_mobile_element biological_region 1027061 1029360 . + . external_name=IS1535%2C len: 2300 nt. Putative Insertion sequence element bounded by 16 bp inverted repeats.;logic_name=ena_mobile_element +Chromosome ena gene 1027104 1027685 . + . ID=gene:Rv0921;biotype=protein_coding;description=Possible resolvase;gene_id=Rv0921;logic_name=ena Chromosome ena mRNA 1027104 1027685 . + . ID=transcript:Rv0921;Parent=gene:Rv0921;biotype=protein_coding;transcript_id=Rv0921 Chromosome ena exon 1027104 1027685 . + . Parent=transcript:Rv0921;Name=Rv0921-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0921-1;rank=1 Chromosome ena CDS 1027104 1027685 . + 0 ID=CDS:Rv0921;Parent=transcript:Rv0921;protein_id=Rv0921 ### -Chromosome ena gene 1027685 1029337 . + . ID=gene:Rv0922;biotype=protein_coding;description=Possible transposase;gene_id=Rv0922;logic_name=ena +Chromosome ena gene 1027685 1029337 . + . ID=gene:Rv0922;biotype=protein_coding;description=Possible transposase;gene_id=Rv0922;logic_name=ena Chromosome ena mRNA 1027685 1029337 . + . ID=transcript:Rv0922;Parent=gene:Rv0922;biotype=protein_coding;transcript_id=Rv0922 Chromosome ena exon 1027685 1029337 . + . Parent=transcript:Rv0922;Name=Rv0922-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0922-1;rank=1 Chromosome ena CDS 1027685 1029337 . + 0 ID=CDS:Rv0922;Parent=transcript:Rv0922;protein_id=Rv0922 ### -Chromosome ena gene 1029513 1030577 . - . ID=gene:Rv0923c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0923c;logic_name=ena +Chromosome ena gene 1029513 1030577 . - . ID=gene:Rv0923c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0923c;logic_name=ena Chromosome ena mRNA 1029513 1030577 . - . ID=transcript:Rv0923c;Parent=gene:Rv0923c;biotype=protein_coding;transcript_id=Rv0923c Chromosome ena exon 1029513 1030577 . - . Parent=transcript:Rv0923c;Name=Rv0923c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0923c-1;rank=1 Chromosome ena CDS 1029513 1030577 . - 0 ID=CDS:Rv0923c;Parent=transcript:Rv0923c;protein_id=Rv0923c ### -Chromosome ena gene 1030578 1031864 . - . ID=gene:Rv0924c;Name=mntH;biotype=protein_coding;description=Divalent cation-transport integral membrane protein MntH (BRAMP) (MRAMP);gene_id=Rv0924c;logic_name=ena +Chromosome ena gene 1030578 1031864 . - . ID=gene:Rv0924c;Name=mntH;biotype=protein_coding;description=Divalent cation-transport integral membrane protein MntH (BRAMP) (MRAMP);gene_id=Rv0924c;logic_name=ena Chromosome ena mRNA 1030578 1031864 . - . ID=transcript:Rv0924c;Parent=gene:Rv0924c;Name=mntH-1;biotype=protein_coding;transcript_id=Rv0924c Chromosome ena exon 1030578 1031864 . - . Parent=transcript:Rv0924c;Name=Rv0924c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0924c-1;rank=1 Chromosome ena CDS 1030578 1031864 . - 0 ID=CDS:Rv0924c;Parent=transcript:Rv0924c;protein_id=Rv0924c ### -Chromosome ena gene 1031896 1032633 . - . ID=gene:Rv0925c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0925c;logic_name=ena +Chromosome ena gene 1031896 1032633 . - . ID=gene:Rv0925c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0925c;logic_name=ena Chromosome ena mRNA 1031896 1032633 . - . ID=transcript:Rv0925c;Parent=gene:Rv0925c;biotype=protein_coding;transcript_id=Rv0925c Chromosome ena exon 1031896 1032633 . - . Parent=transcript:Rv0925c;Name=Rv0925c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0925c-1;rank=1 Chromosome ena CDS 1031896 1032633 . - 0 ID=CDS:Rv0925c;Parent=transcript:Rv0925c;protein_id=Rv0925c ### -Chromosome ena gene 1032710 1033786 . - . ID=gene:Rv0926c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0926c;logic_name=ena +Chromosome ena gene 1032710 1033786 . - . ID=gene:Rv0926c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0926c;logic_name=ena Chromosome ena mRNA 1032710 1033786 . - . ID=transcript:Rv0926c;Parent=gene:Rv0926c;biotype=protein_coding;transcript_id=Rv0926c Chromosome ena exon 1032710 1033786 . - . Parent=transcript:Rv0926c;Name=Rv0926c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0926c-1;rank=1 Chromosome ena CDS 1032710 1033786 . - 0 ID=CDS:Rv0926c;Parent=transcript:Rv0926c;protein_id=Rv0926c ### -Chromosome ena gene 1033840 1034631 . - . ID=gene:Rv0927c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0927c;logic_name=ena +Chromosome ena gene 1033840 1034631 . - . ID=gene:Rv0927c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0927c;logic_name=ena Chromosome ena mRNA 1033840 1034631 . - . ID=transcript:Rv0927c;Parent=gene:Rv0927c;biotype=protein_coding;transcript_id=Rv0927c Chromosome ena exon 1033840 1034631 . - . Parent=transcript:Rv0927c;Name=Rv0927c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0927c-1;rank=1 Chromosome ena CDS 1033840 1034631 . - 0 ID=CDS:Rv0927c;Parent=transcript:Rv0927c;protein_id=Rv0927c ### -Chromosome ena gene 1034903 1036015 . + . ID=gene:Rv0928;Name=pstS3;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS3 (PBP-3) (PstS3) (PHOS1);gene_id=Rv0928;logic_name=ena +Chromosome ena gene 1034903 1036015 . + . ID=gene:Rv0928;Name=pstS3;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS3 (PBP-3) (PstS3) (PHOS1);gene_id=Rv0928;logic_name=ena Chromosome ena mRNA 1034903 1036015 . + . ID=transcript:Rv0928;Parent=gene:Rv0928;Name=pstS3-1;biotype=protein_coding;transcript_id=Rv0928 Chromosome ena exon 1034903 1036015 . + . Parent=transcript:Rv0928;Name=Rv0928-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0928-1;rank=1 Chromosome ena CDS 1034903 1036015 . + 0 ID=CDS:Rv0928;Parent=transcript:Rv0928;protein_id=Rv0928 ### -Chromosome ena gene 1036028 1037002 . + . ID=gene:Rv0929;Name=pstC2;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstC2;gene_id=Rv0929;logic_name=ena +Chromosome ena gene 1036028 1037002 . + . ID=gene:Rv0929;Name=pstC2;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstC2;gene_id=Rv0929;logic_name=ena Chromosome ena mRNA 1036028 1037002 . + . ID=transcript:Rv0929;Parent=gene:Rv0929;Name=pstC2-1;biotype=protein_coding;transcript_id=Rv0929 Chromosome ena exon 1036028 1037002 . + . Parent=transcript:Rv0929;Name=Rv0929-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0929-1;rank=1 Chromosome ena CDS 1036028 1037002 . + 0 ID=CDS:Rv0929;Parent=transcript:Rv0929;protein_id=Rv0929 ### -Chromosome ena gene 1036999 1037925 . + . ID=gene:Rv0930;Name=pstA1;biotype=protein_coding;description=Probable phosphate-transport integral membrane ABC transporter PstA1;gene_id=Rv0930;logic_name=ena +Chromosome ena gene 1036999 1037925 . + . ID=gene:Rv0930;Name=pstA1;biotype=protein_coding;description=Probable phosphate-transport integral membrane ABC transporter PstA1;gene_id=Rv0930;logic_name=ena Chromosome ena mRNA 1036999 1037925 . + . ID=transcript:Rv0930;Parent=gene:Rv0930;Name=pstA1-1;biotype=protein_coding;transcript_id=Rv0930 Chromosome ena exon 1036999 1037925 . + . Parent=transcript:Rv0930;Name=Rv0930-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0930-1;rank=1 Chromosome ena CDS 1036999 1037925 . + 0 ID=CDS:Rv0930;Parent=transcript:Rv0930;protein_id=Rv0930 ### -Chromosome ena gene 1037920 1039914 . - . ID=gene:Rv0931c;Name=pknD;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase D PknD (protein kinase D) (STPK D);gene_id=Rv0931c;logic_name=ena +Chromosome ena gene 1037920 1039914 . - . ID=gene:Rv0931c;Name=pknD;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase D PknD (protein kinase D) (STPK D);gene_id=Rv0931c;logic_name=ena Chromosome ena mRNA 1037920 1039914 . - . ID=transcript:Rv0931c;Parent=gene:Rv0931c;Name=pknD-1;biotype=protein_coding;transcript_id=Rv0931c Chromosome ena exon 1037920 1039914 . - . Parent=transcript:Rv0931c;Name=Rv0931c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0931c-1;rank=1 Chromosome ena CDS 1037920 1039914 . - 0 ID=CDS:Rv0931c;Parent=transcript:Rv0931c;protein_id=Rv0931c ### -Chromosome ena gene 1039936 1041048 . - . ID=gene:Rv0932c;Name=pstS2;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS2 (PBP-2) (PstS2);gene_id=Rv0932c;logic_name=ena +Chromosome ena gene 1039936 1041048 . - . ID=gene:Rv0932c;Name=pstS2;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS2 (PBP-2) (PstS2);gene_id=Rv0932c;logic_name=ena Chromosome ena mRNA 1039936 1041048 . - . ID=transcript:Rv0932c;Parent=gene:Rv0932c;Name=pstS2-1;biotype=protein_coding;transcript_id=Rv0932c Chromosome ena exon 1039936 1041048 . - . Parent=transcript:Rv0932c;Name=Rv0932c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0932c-1;rank=1 Chromosome ena CDS 1039936 1041048 . - 0 ID=CDS:Rv0932c;Parent=transcript:Rv0932c;protein_id=Rv0932c ### -Chromosome ena gene 1041264 1042094 . + . ID=gene:Rv0933;Name=pstB;biotype=protein_coding;description=Phosphate-transport ATP-binding protein ABC transporter PstB;gene_id=Rv0933;logic_name=ena +Chromosome ena gene 1041264 1042094 . + . ID=gene:Rv0933;Name=pstB;biotype=protein_coding;description=Phosphate-transport ATP-binding protein ABC transporter PstB;gene_id=Rv0933;logic_name=ena Chromosome ena mRNA 1041264 1042094 . + . ID=transcript:Rv0933;Parent=gene:Rv0933;Name=pstB-1;biotype=protein_coding;transcript_id=Rv0933 Chromosome ena exon 1041264 1042094 . + . Parent=transcript:Rv0933;Name=Rv0933-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0933-1;rank=1 Chromosome ena CDS 1041264 1042094 . + 0 ID=CDS:Rv0933;Parent=transcript:Rv0933;protein_id=Rv0933 ### -Chromosome ena gene 1042115 1043239 . + . ID=gene:Rv0934;Name=pstS1;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS1 (PBP-1) (PstS1);gene_id=Rv0934;logic_name=ena +Chromosome ena gene 1042115 1043239 . + . ID=gene:Rv0934;Name=pstS1;biotype=protein_coding;description=Periplasmic phosphate-binding lipoprotein PstS1 (PBP-1) (PstS1);gene_id=Rv0934;logic_name=ena Chromosome ena mRNA 1042115 1043239 . + . ID=transcript:Rv0934;Parent=gene:Rv0934;Name=pstS1-1;biotype=protein_coding;transcript_id=Rv0934 Chromosome ena exon 1042115 1043239 . + . Parent=transcript:Rv0934;Name=Rv0934-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0934-1;rank=1 Chromosome ena CDS 1042115 1043239 . + 0 ID=CDS:Rv0934;Parent=transcript:Rv0934;protein_id=Rv0934 ### -Chromosome ena gene 1043299 1044315 . + . ID=gene:Rv0935;Name=pstC1;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstC1;gene_id=Rv0935;logic_name=ena +Chromosome ena gene 1043299 1044315 . + . ID=gene:Rv0935;Name=pstC1;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstC1;gene_id=Rv0935;logic_name=ena Chromosome ena mRNA 1043299 1044315 . + . ID=transcript:Rv0935;Parent=gene:Rv0935;Name=pstC1-1;biotype=protein_coding;transcript_id=Rv0935 Chromosome ena exon 1043299 1044315 . + . Parent=transcript:Rv0935;Name=Rv0935-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0935-1;rank=1 Chromosome ena CDS 1043299 1044315 . + 0 ID=CDS:Rv0935;Parent=transcript:Rv0935;protein_id=Rv0935 ### -Chromosome ena gene 1044317 1045222 . + . ID=gene:Rv0936;Name=pstA2;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstA2;gene_id=Rv0936;logic_name=ena +Chromosome ena gene 1044317 1045222 . + . ID=gene:Rv0936;Name=pstA2;biotype=protein_coding;description=Phosphate-transport integral membrane ABC transporter PstA2;gene_id=Rv0936;logic_name=ena Chromosome ena mRNA 1044317 1045222 . + . ID=transcript:Rv0936;Parent=gene:Rv0936;Name=pstA2-1;biotype=protein_coding;transcript_id=Rv0936 Chromosome ena exon 1044317 1045222 . + . Parent=transcript:Rv0936;Name=Rv0936-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0936-1;rank=1 Chromosome ena CDS 1044317 1045222 . + 0 ID=CDS:Rv0936;Parent=transcript:Rv0936;protein_id=Rv0936 ### -Chromosome ena gene 1045199 1046020 . - . ID=gene:Rv0937c;Name=mku;biotype=protein_coding;description=DNA end-binding protein%2C Mku;gene_id=Rv0937c;logic_name=ena +Chromosome ena gene 1045199 1046020 . - . ID=gene:Rv0937c;Name=mku;biotype=protein_coding;description=DNA end-binding protein%2C Mku;gene_id=Rv0937c;logic_name=ena Chromosome ena mRNA 1045199 1046020 . - . ID=transcript:Rv0937c;Parent=gene:Rv0937c;Name=mku-1;biotype=protein_coding;transcript_id=Rv0937c Chromosome ena exon 1045199 1046020 . - . Parent=transcript:Rv0937c;Name=Rv0937c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0937c-1;rank=1 Chromosome ena CDS 1045199 1046020 . - 0 ID=CDS:Rv0937c;Parent=transcript:Rv0937c;protein_id=Rv0937c ### -Chromosome ena gene 1046136 1048415 . + . ID=gene:Rv0938;Name=ligD;biotype=protein_coding;description=ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase);gene_id=Rv0938;logic_name=ena +Chromosome ena gene 1046136 1048415 . + . ID=gene:Rv0938;Name=ligD;biotype=protein_coding;description=ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase);gene_id=Rv0938;logic_name=ena Chromosome ena mRNA 1046136 1048415 . + . ID=transcript:Rv0938;Parent=gene:Rv0938;Name=ligD-1;biotype=protein_coding;transcript_id=Rv0938 Chromosome ena exon 1046136 1048415 . + . Parent=transcript:Rv0938;Name=Rv0938-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0938-1;rank=1 Chromosome ena CDS 1046136 1048415 . + 0 ID=CDS:Rv0938;Parent=transcript:Rv0938;protein_id=Rv0938 ### -Chromosome ena gene 1048412 1050346 . + . ID=gene:Rv0939;biotype=protein_coding;description=Possible bifunctional enzyme: 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase) + cyclase/dehydrase;gene_id=Rv0939;logic_name=ena +Chromosome ena gene 1048412 1050346 . + . ID=gene:Rv0939;biotype=protein_coding;description=Possible bifunctional enzyme: 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase) + cyclase/dehydrase;gene_id=Rv0939;logic_name=ena Chromosome ena mRNA 1048412 1050346 . + . ID=transcript:Rv0939;Parent=gene:Rv0939;biotype=protein_coding;transcript_id=Rv0939 Chromosome ena exon 1048412 1050346 . + . Parent=transcript:Rv0939;Name=Rv0939-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0939-1;rank=1 Chromosome ena CDS 1048412 1050346 . + 0 ID=CDS:Rv0939;Parent=transcript:Rv0939;protein_id=Rv0939 ### -Chromosome ena gene 1050593 1051459 . - . ID=gene:Rv0940c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0940c;logic_name=ena +Chromosome ena gene 1050593 1051459 . - . ID=gene:Rv0940c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0940c;logic_name=ena Chromosome ena mRNA 1050593 1051459 . - . ID=transcript:Rv0940c;Parent=gene:Rv0940c;biotype=protein_coding;transcript_id=Rv0940c Chromosome ena exon 1050593 1051459 . - . Parent=transcript:Rv0940c;Name=Rv0940c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0940c-1;rank=1 Chromosome ena CDS 1050593 1051459 . - 0 ID=CDS:Rv0940c;Parent=transcript:Rv0940c;protein_id=Rv0940c ### -Chromosome ena gene 1051544 1052317 . - . ID=gene:Rv0941c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0941c;logic_name=ena +Chromosome ena gene 1051544 1052317 . - . ID=gene:Rv0941c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0941c;logic_name=ena Chromosome ena mRNA 1051544 1052317 . - . ID=transcript:Rv0941c;Parent=gene:Rv0941c;biotype=protein_coding;transcript_id=Rv0941c Chromosome ena exon 1051544 1052317 . - . Parent=transcript:Rv0941c;Name=Rv0941c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0941c-1;rank=1 Chromosome ena CDS 1051544 1052317 . - 0 ID=CDS:Rv0941c;Parent=transcript:Rv0941c;protein_id=Rv0941c ### -Chromosome ena gene 1052360 1052638 . + . ID=gene:Rv0942;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0942;logic_name=ena +Chromosome ena gene 1052360 1052638 . + . ID=gene:Rv0942;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0942;logic_name=ena Chromosome ena mRNA 1052360 1052638 . + . ID=transcript:Rv0942;Parent=gene:Rv0942;biotype=protein_coding;transcript_id=Rv0942 Chromosome ena exon 1052360 1052638 . + . Parent=transcript:Rv0942;Name=Rv0942-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0942-1;rank=1 Chromosome ena CDS 1052360 1052638 . + 0 ID=CDS:Rv0942;Parent=transcript:Rv0942;protein_id=Rv0942 ### -Chromosome ena gene 1052696 1053736 . - . ID=gene:Rv0943c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0943c;logic_name=ena +Chromosome ena gene 1052696 1053736 . - . ID=gene:Rv0943c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv0943c;logic_name=ena Chromosome ena mRNA 1052696 1053736 . - . ID=transcript:Rv0943c;Parent=gene:Rv0943c;biotype=protein_coding;transcript_id=Rv0943c Chromosome ena exon 1052696 1053736 . - . Parent=transcript:Rv0943c;Name=Rv0943c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0943c-1;rank=1 Chromosome ena CDS 1052696 1053736 . - 0 ID=CDS:Rv0943c;Parent=transcript:Rv0943c;protein_id=Rv0943c ### -Chromosome ena gene 1053765 1054241 . + . ID=gene:Rv0944;biotype=protein_coding;description=Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase);gene_id=Rv0944;logic_name=ena +Chromosome ena gene 1053765 1054241 . + . ID=gene:Rv0944;biotype=protein_coding;description=Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase);gene_id=Rv0944;logic_name=ena Chromosome ena mRNA 1053765 1054241 . + . ID=transcript:Rv0944;Parent=gene:Rv0944;biotype=protein_coding;transcript_id=Rv0944 Chromosome ena exon 1053765 1054241 . + . Parent=transcript:Rv0944;Name=Rv0944-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0944-1;rank=1 Chromosome ena CDS 1053765 1054241 . + 0 ID=CDS:Rv0944;Parent=transcript:Rv0944;protein_id=Rv0944 ### -Chromosome ena gene 1054247 1055008 . + . ID=gene:Rv0945;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0945;logic_name=ena +Chromosome ena gene 1054247 1055008 . + . ID=gene:Rv0945;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv0945;logic_name=ena Chromosome ena mRNA 1054247 1055008 . + . ID=transcript:Rv0945;Parent=gene:Rv0945;biotype=protein_coding;transcript_id=Rv0945 Chromosome ena exon 1054247 1055008 . + . Parent=transcript:Rv0945;Name=Rv0945-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0945-1;rank=1 Chromosome ena CDS 1054247 1055008 . + 0 ID=CDS:Rv0945;Parent=transcript:Rv0945;protein_id=Rv0945 ### -Chromosome ena gene 1055024 1056685 . - . ID=gene:Rv0946c;Name=pgi;biotype=protein_coding;description=Probable glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (phosphohexose isomerase) (phi);gene_id=Rv0946c;logic_name=ena +Chromosome ena gene 1055024 1056685 . - . ID=gene:Rv0946c;Name=pgi;biotype=protein_coding;description=Probable glucose-6-phosphate isomerase Pgi (GPI) (phosphoglucose isomerase) (phosphohexose isomerase) (phi);gene_id=Rv0946c;logic_name=ena Chromosome ena mRNA 1055024 1056685 . - . ID=transcript:Rv0946c;Parent=gene:Rv0946c;Name=pgi-1;biotype=protein_coding;transcript_id=Rv0946c Chromosome ena exon 1055024 1056685 . - . Parent=transcript:Rv0946c;Name=Rv0946c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0946c-1;rank=1 Chromosome ena CDS 1055024 1056685 . - 0 ID=CDS:Rv0946c;Parent=transcript:Rv0946c;protein_id=Rv0946c ### -Chromosome ena pseudogene 1057300 1057530 . - . ID=gene:Rv0947c;biotype=pseudogene;description=Probable mycolyl transferase%2C pseudogene;gene_id=Rv0947c;logic_name=ena +Chromosome ena pseudogene 1057300 1057530 . - . ID=gene:Rv0947c;biotype=pseudogene;description=Probable mycolyl transferase%2C pseudogene;gene_id=Rv0947c;logic_name=ena Chromosome ena pseudogene 1057300 1057530 . - . ID=transcript:Rv0947c;Parent=gene:Rv0947c;biotype=pseudogene;transcript_id=Rv0947c Chromosome ena exon 1057300 1057530 . - . Parent=transcript:Rv0947c;Name=Rv0947c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0947c-1;rank=1 ### -Chromosome ena gene 1057646 1057963 . - . ID=gene:Rv0948c;biotype=protein_coding;description=Chorismate mutase;gene_id=Rv0948c;logic_name=ena +Chromosome ena gene 1057646 1057963 . - . ID=gene:Rv0948c;biotype=protein_coding;description=Chorismate mutase;gene_id=Rv0948c;logic_name=ena Chromosome ena mRNA 1057646 1057963 . - . ID=transcript:Rv0948c;Parent=gene:Rv0948c;biotype=protein_coding;transcript_id=Rv0948c Chromosome ena exon 1057646 1057963 . - . Parent=transcript:Rv0948c;Name=Rv0948c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0948c-1;rank=1 Chromosome ena CDS 1057646 1057963 . - 0 ID=CDS:Rv0948c;Parent=transcript:Rv0948c;protein_id=Rv0948c ### -Chromosome ena gene 1058260 1060575 . + . ID=gene:Rv0949;Name=uvrD1;biotype=protein_coding;description=Probable ATP-dependent DNA helicase II UvrD1;gene_id=Rv0949;logic_name=ena +Chromosome ena gene 1058260 1060575 . + . ID=gene:Rv0949;Name=uvrD1;biotype=protein_coding;description=Probable ATP-dependent DNA helicase II UvrD1;gene_id=Rv0949;logic_name=ena Chromosome ena mRNA 1058260 1060575 . + . ID=transcript:Rv0949;Parent=gene:Rv0949;Name=uvrD1-1;biotype=protein_coding;transcript_id=Rv0949 Chromosome ena exon 1058260 1060575 . + . Parent=transcript:Rv0949;Name=Rv0949-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0949-1;rank=1 Chromosome ena CDS 1058260 1060575 . + 0 ID=CDS:Rv0949;Parent=transcript:Rv0949;protein_id=Rv0949 ### -Chromosome ena gene 1060656 1061654 . - . ID=gene:Rv0950c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0950c;logic_name=ena +Chromosome ena gene 1060656 1061654 . - . ID=gene:Rv0950c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0950c;logic_name=ena Chromosome ena mRNA 1060656 1061654 . - . ID=transcript:Rv0950c;Parent=gene:Rv0950c;biotype=protein_coding;transcript_id=Rv0950c Chromosome ena exon 1060656 1061654 . - . Parent=transcript:Rv0950c;Name=Rv0950c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0950c-1;rank=1 Chromosome ena CDS 1060656 1061654 . - 0 ID=CDS:Rv0950c;Parent=transcript:Rv0950c;protein_id=Rv0950c ### -Chromosome ena gene 1061964 1063127 . + . ID=gene:Rv0951;Name=sucC;biotype=protein_coding;description=Probable succinyl-CoA synthetase (beta chain) SucC (SCS-beta);gene_id=Rv0951;logic_name=ena +Chromosome ena gene 1061964 1063127 . + . ID=gene:Rv0951;Name=sucC;biotype=protein_coding;description=Probable succinyl-CoA synthetase (beta chain) SucC (SCS-beta);gene_id=Rv0951;logic_name=ena Chromosome ena mRNA 1061964 1063127 . + . ID=transcript:Rv0951;Parent=gene:Rv0951;Name=sucC-1;biotype=protein_coding;transcript_id=Rv0951 Chromosome ena exon 1061964 1063127 . + . Parent=transcript:Rv0951;Name=Rv0951-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0951-1;rank=1 Chromosome ena CDS 1061964 1063127 . + 0 ID=CDS:Rv0951;Parent=transcript:Rv0951;protein_id=Rv0951 ### -Chromosome ena gene 1063140 1064051 . + . ID=gene:Rv0952;Name=sucD;biotype=protein_coding;description=Probable succinyl-CoA synthetase (alpha chain) SucD (SCS-alpha);gene_id=Rv0952;logic_name=ena +Chromosome ena gene 1063140 1064051 . + . ID=gene:Rv0952;Name=sucD;biotype=protein_coding;description=Probable succinyl-CoA synthetase (alpha chain) SucD (SCS-alpha);gene_id=Rv0952;logic_name=ena Chromosome ena mRNA 1063140 1064051 . + . ID=transcript:Rv0952;Parent=gene:Rv0952;Name=sucD-1;biotype=protein_coding;transcript_id=Rv0952 Chromosome ena exon 1063140 1064051 . + . Parent=transcript:Rv0952;Name=Rv0952-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0952-1;rank=1 Chromosome ena CDS 1063140 1064051 . + 0 ID=CDS:Rv0952;Parent=transcript:Rv0952;protein_id=Rv0952 ### -Chromosome ena gene 1064114 1064962 . - . ID=gene:Rv0953c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0953c;logic_name=ena +Chromosome ena gene 1064114 1064962 . - . ID=gene:Rv0953c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv0953c;logic_name=ena Chromosome ena mRNA 1064114 1064962 . - . ID=transcript:Rv0953c;Parent=gene:Rv0953c;biotype=protein_coding;transcript_id=Rv0953c Chromosome ena exon 1064114 1064962 . - . Parent=transcript:Rv0953c;Name=Rv0953c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0953c-1;rank=1 Chromosome ena CDS 1064114 1064962 . - 0 ID=CDS:Rv0953c;Parent=transcript:Rv0953c;protein_id=Rv0953c ### -Chromosome ena gene 1065127 1066038 . + . ID=gene:Rv0954;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0954;logic_name=ena +Chromosome ena gene 1065127 1066038 . + . ID=gene:Rv0954;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0954;logic_name=ena Chromosome ena mRNA 1065127 1066038 . + . ID=transcript:Rv0954;Parent=gene:Rv0954;biotype=protein_coding;transcript_id=Rv0954 Chromosome ena exon 1065127 1066038 . + . Parent=transcript:Rv0954;Name=Rv0954-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0954-1;rank=1 Chromosome ena CDS 1065127 1066038 . + 0 ID=CDS:Rv0954;Parent=transcript:Rv0954;protein_id=Rv0954 ### -Chromosome ena gene 1066078 1067445 . + . ID=gene:Rv0955;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0955;logic_name=ena +Chromosome ena gene 1066078 1067445 . + . ID=gene:Rv0955;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0955;logic_name=ena Chromosome ena mRNA 1066078 1067445 . + . ID=transcript:Rv0955;Parent=gene:Rv0955;biotype=protein_coding;transcript_id=Rv0955 Chromosome ena exon 1066078 1067445 . + . Parent=transcript:Rv0955;Name=Rv0955-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0955-1;rank=1 Chromosome ena CDS 1066078 1067445 . + 0 ID=CDS:Rv0955;Parent=transcript:Rv0955;protein_id=Rv0955 ### -Chromosome ena gene 1067561 1068208 . + . ID=gene:Rv0956;Name=purN;biotype=protein_coding;description=Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase);gene_id=Rv0956;logic_name=ena +Chromosome ena gene 1067561 1068208 . + . ID=gene:Rv0956;Name=purN;biotype=protein_coding;description=Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase);gene_id=Rv0956;logic_name=ena Chromosome ena mRNA 1067561 1068208 . + . ID=transcript:Rv0956;Parent=gene:Rv0956;Name=purN-1;biotype=protein_coding;transcript_id=Rv0956 Chromosome ena exon 1067561 1068208 . + . Parent=transcript:Rv0956;Name=Rv0956-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0956-1;rank=1 Chromosome ena CDS 1067561 1068208 . + 0 ID=CDS:Rv0956;Parent=transcript:Rv0956;protein_id=Rv0956 ### -Chromosome ena gene 1068205 1069776 . + . ID=gene:Rv0957;Name=purH;biotype=protein_coding;description=Probable bifunctional purine biosynthesis protein PurH: phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) (5'-phosphoribosyl-5-aminoimidazole-4-carboxamide formyltransferase) + inosinemonophosphate cyclohydrolase (imp cyclohydrolase) (inosinicase) (imp synthetase) (ATIC);gene_id=Rv0957;logic_name=ena +Chromosome ena gene 1068205 1069776 . + . ID=gene:Rv0957;Name=purH;biotype=protein_coding;description=Probable bifunctional purine biosynthesis protein PurH: phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) (5'-phosphoribosyl-5-aminoimidazole-4-carboxamide formyltransferase) + inosinemonophosphate cyclohydrolase (imp cyclohydrolase) (inosinicase) (imp synthetase) (ATIC);gene_id=Rv0957;logic_name=ena Chromosome ena mRNA 1068205 1069776 . + . ID=transcript:Rv0957;Parent=gene:Rv0957;Name=purH-1;biotype=protein_coding;transcript_id=Rv0957 Chromosome ena exon 1068205 1069776 . + . Parent=transcript:Rv0957;Name=Rv0957-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0957-1;rank=1 Chromosome ena CDS 1068205 1069776 . + 0 ID=CDS:Rv0957;Parent=transcript:Rv0957;protein_id=Rv0957 ### -Chromosome ena gene 1069883 1071262 . + . ID=gene:Rv0958;biotype=protein_coding;description=Possible magnesium chelatase;gene_id=Rv0958;logic_name=ena +Chromosome ena gene 1069883 1071262 . + . ID=gene:Rv0958;biotype=protein_coding;description=Possible magnesium chelatase;gene_id=Rv0958;logic_name=ena Chromosome ena mRNA 1069883 1071262 . + . ID=transcript:Rv0958;Parent=gene:Rv0958;biotype=protein_coding;transcript_id=Rv0958 Chromosome ena exon 1069883 1071262 . + . Parent=transcript:Rv0958;Name=Rv0958-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0958-1;rank=1 Chromosome ena CDS 1069883 1071262 . + 0 ID=CDS:Rv0958;Parent=transcript:Rv0958;protein_id=Rv0958 ### -Chromosome ena gene 1071255 1073273 . + . ID=gene:Rv0959;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0959;logic_name=ena +Chromosome ena gene 1071255 1073273 . + . ID=gene:Rv0959;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0959;logic_name=ena Chromosome ena mRNA 1071255 1073273 . + . ID=transcript:Rv0959;Parent=gene:Rv0959;biotype=protein_coding;transcript_id=Rv0959 Chromosome ena exon 1071255 1073273 . + . Parent=transcript:Rv0959;Name=Rv0959-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0959-1;rank=1 Chromosome ena CDS 1071255 1073273 . + 0 ID=CDS:Rv0959;Parent=transcript:Rv0959;protein_id=Rv0959 ### -Chromosome ena gene 1073327 1073548 . + . ID=gene:Rv0959A;Name=vapB9;biotype=protein_coding;description=Possible antitoxin VapB9;gene_id=Rv0959A;logic_name=ena +Chromosome ena gene 1073327 1073548 . + . ID=gene:Rv0959A;Name=vapB9;biotype=protein_coding;description=Possible antitoxin VapB9;gene_id=Rv0959A;logic_name=ena Chromosome ena mRNA 1073327 1073548 . + . ID=transcript:Rv0959A;Parent=gene:Rv0959A;Name=vapB9-1;biotype=protein_coding;transcript_id=Rv0959A Chromosome ena exon 1073327 1073548 . + . Parent=transcript:Rv0959A;Name=Rv0959A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0959A-1;rank=1 Chromosome ena CDS 1073327 1073548 . + 0 ID=CDS:Rv0959A;Parent=transcript:Rv0959A;protein_id=Rv0959A ### -Chromosome ena gene 1073545 1073928 . + . ID=gene:Rv0960;Name=vapC9;biotype=protein_coding;description=Possible toxin VapC9;gene_id=Rv0960;logic_name=ena +Chromosome ena gene 1073545 1073928 . + . ID=gene:Rv0960;Name=vapC9;biotype=protein_coding;description=Possible toxin VapC9;gene_id=Rv0960;logic_name=ena Chromosome ena mRNA 1073545 1073928 . + . ID=transcript:Rv0960;Parent=gene:Rv0960;Name=vapC9-1;biotype=protein_coding;transcript_id=Rv0960 Chromosome ena exon 1073545 1073928 . + . Parent=transcript:Rv0960;Name=Rv0960-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0960-1;rank=1 Chromosome ena CDS 1073545 1073928 . + 0 ID=CDS:Rv0960;Parent=transcript:Rv0960;protein_id=Rv0960 ### -Chromosome ena gene 1074074 1074421 . + . ID=gene:Rv0961;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0961;logic_name=ena +Chromosome ena gene 1074074 1074421 . + . ID=gene:Rv0961;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv0961;logic_name=ena Chromosome ena mRNA 1074074 1074421 . + . ID=transcript:Rv0961;Parent=gene:Rv0961;biotype=protein_coding;transcript_id=Rv0961 Chromosome ena exon 1074074 1074421 . + . Parent=transcript:Rv0961;Name=Rv0961-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0961-1;rank=1 Chromosome ena CDS 1074074 1074421 . + 0 ID=CDS:Rv0961;Parent=transcript:Rv0961;protein_id=Rv0961 ### -Chromosome ena gene 1074440 1075114 . - . ID=gene:Rv0962c;Name=lprP;biotype=protein_coding;description=Possible lipoprotein LprP;gene_id=Rv0962c;logic_name=ena +Chromosome ena gene 1074440 1075114 . - . ID=gene:Rv0962c;Name=lprP;biotype=protein_coding;description=Possible lipoprotein LprP;gene_id=Rv0962c;logic_name=ena Chromosome ena mRNA 1074440 1075114 . - . ID=transcript:Rv0962c;Parent=gene:Rv0962c;Name=lprP-1;biotype=protein_coding;transcript_id=Rv0962c Chromosome ena exon 1074440 1075114 . - . Parent=transcript:Rv0962c;Name=Rv0962c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0962c-1;rank=1 Chromosome ena CDS 1074440 1075114 . - 0 ID=CDS:Rv0962c;Parent=transcript:Rv0962c;protein_id=Rv0962c ### -Chromosome ena gene 1075297 1076097 . - . ID=gene:Rv0963c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0963c;logic_name=ena +Chromosome ena gene 1075297 1076097 . - . ID=gene:Rv0963c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0963c;logic_name=ena Chromosome ena mRNA 1075297 1076097 . - . ID=transcript:Rv0963c;Parent=gene:Rv0963c;biotype=protein_coding;transcript_id=Rv0963c Chromosome ena exon 1075297 1076097 . - . Parent=transcript:Rv0963c;Name=Rv0963c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0963c-1;rank=1 Chromosome ena CDS 1075297 1076097 . - 0 ID=CDS:Rv0963c;Parent=transcript:Rv0963c;protein_id=Rv0963c ### -Chromosome ena gene 1076196 1076678 . - . ID=gene:Rv0964c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0964c;logic_name=ena +Chromosome ena gene 1076196 1076678 . - . ID=gene:Rv0964c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0964c;logic_name=ena Chromosome ena mRNA 1076196 1076678 . - . ID=transcript:Rv0964c;Parent=gene:Rv0964c;biotype=protein_coding;transcript_id=Rv0964c Chromosome ena exon 1076196 1076678 . - . Parent=transcript:Rv0964c;Name=Rv0964c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0964c-1;rank=1 Chromosome ena CDS 1076196 1076678 . - 0 ID=CDS:Rv0964c;Parent=transcript:Rv0964c;protein_id=Rv0964c ### -Chromosome ena gene 1076778 1077197 . - . ID=gene:Rv0965c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0965c;logic_name=ena +Chromosome ena gene 1076778 1077197 . - . ID=gene:Rv0965c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0965c;logic_name=ena Chromosome ena mRNA 1076778 1077197 . - . ID=transcript:Rv0965c;Parent=gene:Rv0965c;biotype=protein_coding;transcript_id=Rv0965c Chromosome ena exon 1076778 1077197 . - . Parent=transcript:Rv0965c;Name=Rv0965c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0965c-1;rank=1 Chromosome ena CDS 1076778 1077197 . - 0 ID=CDS:Rv0965c;Parent=transcript:Rv0965c;protein_id=Rv0965c ### -Chromosome ena gene 1077233 1077835 . - . ID=gene:Rv0966c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0966c;logic_name=ena +Chromosome ena gene 1077233 1077835 . - . ID=gene:Rv0966c;biotype=protein_coding;description=Conserved protein;gene_id=Rv0966c;logic_name=ena Chromosome ena mRNA 1077233 1077835 . - . ID=transcript:Rv0966c;Parent=gene:Rv0966c;biotype=protein_coding;transcript_id=Rv0966c Chromosome ena exon 1077233 1077835 . - . Parent=transcript:Rv0966c;Name=Rv0966c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0966c-1;rank=1 Chromosome ena CDS 1077233 1077835 . - 0 ID=CDS:Rv0966c;Parent=transcript:Rv0966c;protein_id=Rv0966c ### -Chromosome ena gene 1077975 1078334 . + . ID=gene:Rv0967;Name=csoR;biotype=protein_coding;description=Copper-sensitive operon repressor CsoR;gene_id=Rv0967;logic_name=ena +Chromosome ena gene 1077975 1078334 . + . ID=gene:Rv0967;Name=csoR;biotype=protein_coding;description=Copper-sensitive operon repressor CsoR;gene_id=Rv0967;logic_name=ena Chromosome ena mRNA 1077975 1078334 . + . ID=transcript:Rv0967;Parent=gene:Rv0967;Name=csoR-1;biotype=protein_coding;transcript_id=Rv0967 Chromosome ena exon 1077975 1078334 . + . Parent=transcript:Rv0967;Name=Rv0967-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0967-1;rank=1 Chromosome ena CDS 1077975 1078334 . + 0 ID=CDS:Rv0967;Parent=transcript:Rv0967;protein_id=Rv0967 ### -Chromosome ena gene 1078391 1078687 . + . ID=gene:Rv0968;biotype=protein_coding;description=Conserved protein;gene_id=Rv0968;logic_name=ena +Chromosome ena gene 1078391 1078687 . + . ID=gene:Rv0968;biotype=protein_coding;description=Conserved protein;gene_id=Rv0968;logic_name=ena Chromosome ena mRNA 1078391 1078687 . + . ID=transcript:Rv0968;Parent=gene:Rv0968;biotype=protein_coding;transcript_id=Rv0968 Chromosome ena exon 1078391 1078687 . + . Parent=transcript:Rv0968;Name=Rv0968-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0968-1;rank=1 Chromosome ena CDS 1078391 1078687 . + 0 ID=CDS:Rv0968;Parent=transcript:Rv0968;protein_id=Rv0968 ### -Chromosome ena gene 1078743 1081055 . + . ID=gene:Rv0969;Name=ctpV;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase CtpV;gene_id=Rv0969;logic_name=ena +Chromosome ena gene 1078743 1081055 . + . ID=gene:Rv0969;Name=ctpV;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase CtpV;gene_id=Rv0969;logic_name=ena Chromosome ena mRNA 1078743 1081055 . + . ID=transcript:Rv0969;Parent=gene:Rv0969;Name=ctpV-1;biotype=protein_coding;transcript_id=Rv0969 Chromosome ena exon 1078743 1081055 . + . Parent=transcript:Rv0969;Name=Rv0969-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0969-1;rank=1 Chromosome ena CDS 1078743 1081055 . + 0 ID=CDS:Rv0969;Parent=transcript:Rv0969;protein_id=Rv0969 ### -Chromosome ena gene 1081052 1081684 . + . ID=gene:Rv0970;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0970;logic_name=ena +Chromosome ena gene 1081052 1081684 . + . ID=gene:Rv0970;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv0970;logic_name=ena Chromosome ena mRNA 1081052 1081684 . + . ID=transcript:Rv0970;Parent=gene:Rv0970;biotype=protein_coding;transcript_id=Rv0970 Chromosome ena exon 1081052 1081684 . + . Parent=transcript:Rv0970;Name=Rv0970-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0970-1;rank=1 Chromosome ena CDS 1081052 1081684 . + 0 ID=CDS:Rv0970;Parent=transcript:Rv0970;protein_id=Rv0970 ### -Chromosome ena gene 1081775 1082584 . - . ID=gene:Rv0971c;Name=echA7;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0971c;logic_name=ena +Chromosome ena gene 1081775 1082584 . - . ID=gene:Rv0971c;Name=echA7;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv0971c;logic_name=ena Chromosome ena mRNA 1081775 1082584 . - . ID=transcript:Rv0971c;Parent=gene:Rv0971c;Name=echA7-1;biotype=protein_coding;transcript_id=Rv0971c Chromosome ena exon 1081775 1082584 . - . Parent=transcript:Rv0971c;Name=Rv0971c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0971c-1;rank=1 Chromosome ena CDS 1081775 1082584 . - 0 ID=CDS:Rv0971c;Parent=transcript:Rv0971c;protein_id=Rv0971c ### -Chromosome ena gene 1082584 1083750 . - . ID=gene:Rv0972c;Name=fadE12;biotype=protein_coding;description=Acyl-CoA dehydrogenase FadE12;gene_id=Rv0972c;logic_name=ena +Chromosome ena gene 1082584 1083750 . - . ID=gene:Rv0972c;Name=fadE12;biotype=protein_coding;description=Acyl-CoA dehydrogenase FadE12;gene_id=Rv0972c;logic_name=ena Chromosome ena mRNA 1082584 1083750 . - . ID=transcript:Rv0972c;Parent=gene:Rv0972c;Name=fadE12-1;biotype=protein_coding;transcript_id=Rv0972c Chromosome ena exon 1082584 1083750 . - . Parent=transcript:Rv0972c;Name=Rv0972c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0972c-1;rank=1 Chromosome ena CDS 1082584 1083750 . - 0 ID=CDS:Rv0972c;Parent=transcript:Rv0972c;protein_id=Rv0972c ### -Chromosome ena gene 1083747 1085750 . - . ID=gene:Rv0973c;Name=accA2;biotype=protein_coding;description=Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA2: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv0973c;logic_name=ena +Chromosome ena gene 1083747 1085750 . - . ID=gene:Rv0973c;Name=accA2;biotype=protein_coding;description=Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA2: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv0973c;logic_name=ena Chromosome ena mRNA 1083747 1085750 . - . ID=transcript:Rv0973c;Parent=gene:Rv0973c;Name=accA2-1;biotype=protein_coding;transcript_id=Rv0973c Chromosome ena exon 1083747 1085750 . - . Parent=transcript:Rv0973c;Name=Rv0973c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0973c-1;rank=1 Chromosome ena CDS 1083747 1085750 . - 0 ID=CDS:Rv0973c;Parent=transcript:Rv0973c;protein_id=Rv0973c ### -Chromosome ena gene 1085756 1087345 . - . ID=gene:Rv0974c;Name=accD2;biotype=protein_coding;description=Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2;gene_id=Rv0974c;logic_name=ena +Chromosome ena gene 1085756 1087345 . - . ID=gene:Rv0974c;Name=accD2;biotype=protein_coding;description=Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2;gene_id=Rv0974c;logic_name=ena Chromosome ena mRNA 1085756 1087345 . - . ID=transcript:Rv0974c;Parent=gene:Rv0974c;Name=accD2-1;biotype=protein_coding;transcript_id=Rv0974c Chromosome ena exon 1085756 1087345 . - . Parent=transcript:Rv0974c;Name=Rv0974c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0974c-1;rank=1 Chromosome ena CDS 1085756 1087345 . - 0 ID=CDS:Rv0974c;Parent=transcript:Rv0974c;protein_id=Rv0974c ### -Chromosome ena gene 1087348 1088496 . - . ID=gene:Rv0975c;Name=fadE13;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE13;gene_id=Rv0975c;logic_name=ena +Chromosome ena gene 1087348 1088496 . - . ID=gene:Rv0975c;Name=fadE13;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE13;gene_id=Rv0975c;logic_name=ena Chromosome ena mRNA 1087348 1088496 . - . ID=transcript:Rv0975c;Parent=gene:Rv0975c;Name=fadE13-1;biotype=protein_coding;transcript_id=Rv0975c Chromosome ena exon 1087348 1088496 . - . Parent=transcript:Rv0975c;Name=Rv0975c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0975c-1;rank=1 Chromosome ena CDS 1087348 1088496 . - 0 ID=CDS:Rv0975c;Parent=transcript:Rv0975c;protein_id=Rv0975c ### -Chromosome ena gene 1088493 1090175 . - . ID=gene:Rv0976c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0976c;logic_name=ena +Chromosome ena gene 1088493 1090175 . - . ID=gene:Rv0976c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0976c;logic_name=ena Chromosome ena mRNA 1088493 1090175 . - . ID=transcript:Rv0976c;Parent=gene:Rv0976c;biotype=protein_coding;transcript_id=Rv0976c Chromosome ena exon 1088493 1090175 . - . Parent=transcript:Rv0976c;Name=Rv0976c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0976c-1;rank=1 Chromosome ena CDS 1088493 1090175 . - 0 ID=CDS:Rv0976c;Parent=transcript:Rv0976c;protein_id=Rv0976c ### -Chromosome ena gene 1090373 1093144 . + . ID=gene:Rv0977;Name=PE_PGRS16;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS16;gene_id=Rv0977;logic_name=ena +Chromosome ena gene 1090373 1093144 . + . ID=gene:Rv0977;Name=PE_PGRS16;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS16;gene_id=Rv0977;logic_name=ena Chromosome ena mRNA 1090373 1093144 . + . ID=transcript:Rv0977;Parent=gene:Rv0977;Name=PE_PGRS16-1;biotype=protein_coding;transcript_id=Rv0977 Chromosome ena exon 1090373 1093144 . + . Parent=transcript:Rv0977;Name=Rv0977-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0977-1;rank=1 Chromosome ena CDS 1090373 1093144 . + 0 ID=CDS:Rv0977;Parent=transcript:Rv0977;protein_id=Rv0977 ### -Chromosome ena gene 1093361 1094356 . - . ID=gene:Rv0978c;Name=PE_PGRS17;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS17;gene_id=Rv0978c;logic_name=ena +Chromosome ena gene 1093361 1094356 . - . ID=gene:Rv0978c;Name=PE_PGRS17;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS17;gene_id=Rv0978c;logic_name=ena Chromosome ena mRNA 1093361 1094356 . - . ID=transcript:Rv0978c;Parent=gene:Rv0978c;Name=PE_PGRS17-1;biotype=protein_coding;transcript_id=Rv0978c Chromosome ena exon 1093361 1094356 . - . Parent=transcript:Rv0978c;Name=Rv0978c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0978c-1;rank=1 Chromosome ena CDS 1093361 1094356 . - 0 ID=CDS:Rv0978c;Parent=transcript:Rv0978c;protein_id=Rv0978c ### -Chromosome ena gene 1094670 1094864 . - . ID=gene:Rv0979c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0979c;logic_name=ena +Chromosome ena gene 1094670 1094864 . - . ID=gene:Rv0979c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0979c;logic_name=ena Chromosome ena mRNA 1094670 1094864 . - . ID=transcript:Rv0979c;Parent=gene:Rv0979c;biotype=protein_coding;transcript_id=Rv0979c Chromosome ena exon 1094670 1094864 . - . Parent=transcript:Rv0979c;Name=Rv0979c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0979c-1;rank=1 Chromosome ena CDS 1094670 1094864 . - 0 ID=CDS:Rv0979c;Parent=transcript:Rv0979c;protein_id=Rv0979c ### -Chromosome ena gene 1094886 1095059 . + . ID=gene:Rv0979A;Name=rpmF;biotype=protein_coding;description=50S ribosomal protein L32 RpmF;gene_id=Rv0979A;logic_name=ena +Chromosome ena gene 1094886 1095059 . + . ID=gene:Rv0979A;Name=rpmF;biotype=protein_coding;description=50S ribosomal protein L32 RpmF;gene_id=Rv0979A;logic_name=ena Chromosome ena mRNA 1094886 1095059 . + . ID=transcript:Rv0979A;Parent=gene:Rv0979A;Name=rpmF-1;biotype=protein_coding;transcript_id=Rv0979A Chromosome ena exon 1094886 1095059 . + . Parent=transcript:Rv0979A;Name=Rv0979A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0979A-1;rank=1 Chromosome ena CDS 1094886 1095059 . + 0 ID=CDS:Rv0979A;Parent=transcript:Rv0979A;protein_id=Rv0979A ### -Chromosome ena gene 1095078 1096451 . - . ID=gene:Rv0980c;Name=PE_PGRS18;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS18;gene_id=Rv0980c;logic_name=ena +Chromosome ena gene 1095078 1096451 . - . ID=gene:Rv0980c;Name=PE_PGRS18;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS18;gene_id=Rv0980c;logic_name=ena Chromosome ena mRNA 1095078 1096451 . - . ID=transcript:Rv0980c;Parent=gene:Rv0980c;Name=PE_PGRS18-1;biotype=protein_coding;transcript_id=Rv0980c Chromosome ena exon 1095078 1096451 . - . Parent=transcript:Rv0980c;Name=Rv0980c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0980c-1;rank=1 Chromosome ena CDS 1095078 1096451 . - 0 ID=CDS:Rv0980c;Parent=transcript:Rv0980c;protein_id=Rv0980c ### -Chromosome ena gene 1096822 1097508 . + . ID=gene:Rv0981;Name=mprA;biotype=protein_coding;description=Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein);gene_id=Rv0981;logic_name=ena +Chromosome ena gene 1096822 1097508 . + . ID=gene:Rv0981;Name=mprA;biotype=protein_coding;description=Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein);gene_id=Rv0981;logic_name=ena Chromosome ena mRNA 1096822 1097508 . + . ID=transcript:Rv0981;Parent=gene:Rv0981;Name=mprA-1;biotype=protein_coding;transcript_id=Rv0981 Chromosome ena exon 1096822 1097508 . + . Parent=transcript:Rv0981;Name=Rv0981-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0981-1;rank=1 Chromosome ena CDS 1096822 1097508 . + 0 ID=CDS:Rv0981;Parent=transcript:Rv0981;protein_id=Rv0981 ### -Chromosome ena gene 1097508 1099022 . + . ID=gene:Rv0982;Name=mprB;biotype=protein_coding;description=Two component sensor kinase MprB;gene_id=Rv0982;logic_name=ena +Chromosome ena gene 1097508 1099022 . + . ID=gene:Rv0982;Name=mprB;biotype=protein_coding;description=Two component sensor kinase MprB;gene_id=Rv0982;logic_name=ena Chromosome ena mRNA 1097508 1099022 . + . ID=transcript:Rv0982;Parent=gene:Rv0982;Name=mprB-1;biotype=protein_coding;transcript_id=Rv0982 Chromosome ena exon 1097508 1099022 . + . Parent=transcript:Rv0982;Name=Rv0982-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0982-1;rank=1 Chromosome ena CDS 1097508 1099022 . + 0 ID=CDS:Rv0982;Parent=transcript:Rv0982;protein_id=Rv0982 ### -Chromosome ena gene 1099066 1100460 . + . ID=gene:Rv0983;Name=pepD;biotype=protein_coding;description=Probable serine protease PepD (serine proteinase) (MTB32B);gene_id=Rv0983;logic_name=ena +Chromosome ena gene 1099066 1100460 . + . ID=gene:Rv0983;Name=pepD;biotype=protein_coding;description=Probable serine protease PepD (serine proteinase) (MTB32B);gene_id=Rv0983;logic_name=ena Chromosome ena mRNA 1099066 1100460 . + . ID=transcript:Rv0983;Parent=gene:Rv0983;Name=pepD-1;biotype=protein_coding;transcript_id=Rv0983 Chromosome ena exon 1099066 1100460 . + . Parent=transcript:Rv0983;Name=Rv0983-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0983-1;rank=1 Chromosome ena CDS 1099066 1100460 . + 0 ID=CDS:Rv0983;Parent=transcript:Rv0983;protein_id=Rv0983 ### -Chromosome ena gene 1100460 1101005 . + . ID=gene:Rv0984;Name=moaB2;biotype=protein_coding;description=Possible pterin-4-alpha-carbinolamine dehydratase MoaB2 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv0984;logic_name=ena +Chromosome ena gene 1100460 1101005 . + . ID=gene:Rv0984;Name=moaB2;biotype=protein_coding;description=Possible pterin-4-alpha-carbinolamine dehydratase MoaB2 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv0984;logic_name=ena Chromosome ena mRNA 1100460 1101005 . + . ID=transcript:Rv0984;Parent=gene:Rv0984;Name=moaB2-1;biotype=protein_coding;transcript_id=Rv0984 Chromosome ena exon 1100460 1101005 . + . Parent=transcript:Rv0984;Name=Rv0984-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0984-1;rank=1 Chromosome ena CDS 1100460 1101005 . + 0 ID=CDS:Rv0984;Parent=transcript:Rv0984;protein_id=Rv0984 ### -Chromosome ena gene 1101025 1101480 . - . ID=gene:Rv0985c;Name=mscL;biotype=protein_coding;description=Possible large-conductance ion mechanosensitive channel MscL;gene_id=Rv0985c;logic_name=ena +Chromosome ena gene 1101025 1101480 . - . ID=gene:Rv0985c;Name=mscL;biotype=protein_coding;description=Possible large-conductance ion mechanosensitive channel MscL;gene_id=Rv0985c;logic_name=ena Chromosome ena mRNA 1101025 1101480 . - . ID=transcript:Rv0985c;Parent=gene:Rv0985c;Name=mscL-1;biotype=protein_coding;transcript_id=Rv0985c Chromosome ena exon 1101025 1101480 . - . Parent=transcript:Rv0985c;Name=Rv0985c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0985c-1;rank=1 Chromosome ena CDS 1101025 1101480 . - 0 ID=CDS:Rv0985c;Parent=transcript:Rv0985c;protein_id=Rv0985c ### -Chromosome ena gene 1101803 1102549 . + . ID=gene:Rv0986;biotype=protein_coding;description=Probable adhesion component transport ATP-binding protein ABC transporter;gene_id=Rv0986;logic_name=ena +Chromosome ena gene 1101803 1102549 . + . ID=gene:Rv0986;biotype=protein_coding;description=Probable adhesion component transport ATP-binding protein ABC transporter;gene_id=Rv0986;logic_name=ena Chromosome ena mRNA 1101803 1102549 . + . ID=transcript:Rv0986;Parent=gene:Rv0986;biotype=protein_coding;transcript_id=Rv0986 Chromosome ena exon 1101803 1102549 . + . Parent=transcript:Rv0986;Name=Rv0986-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0986-1;rank=1 Chromosome ena CDS 1101803 1102549 . + 0 ID=CDS:Rv0986;Parent=transcript:Rv0986;protein_id=Rv0986 ### -Chromosome ena gene 1102542 1105109 . + . ID=gene:Rv0987;biotype=protein_coding;description=Probable adhesion component transport transmembrane protein ABC transporter;gene_id=Rv0987;logic_name=ena +Chromosome ena gene 1102542 1105109 . + . ID=gene:Rv0987;biotype=protein_coding;description=Probable adhesion component transport transmembrane protein ABC transporter;gene_id=Rv0987;logic_name=ena Chromosome ena mRNA 1102542 1105109 . + . ID=transcript:Rv0987;Parent=gene:Rv0987;biotype=protein_coding;transcript_id=Rv0987 Chromosome ena exon 1102542 1105109 . + . Parent=transcript:Rv0987;Name=Rv0987-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0987-1;rank=1 Chromosome ena CDS 1102542 1105109 . + 0 ID=CDS:Rv0987;Parent=transcript:Rv0987;protein_id=Rv0987 ### -Chromosome ena gene 1105116 1106276 . + . ID=gene:Rv0988;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0988;logic_name=ena +Chromosome ena gene 1105116 1106276 . + . ID=gene:Rv0988;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv0988;logic_name=ena Chromosome ena mRNA 1105116 1106276 . + . ID=transcript:Rv0988;Parent=gene:Rv0988;biotype=protein_coding;transcript_id=Rv0988 Chromosome ena exon 1105116 1106276 . + . Parent=transcript:Rv0988;Name=Rv0988-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0988-1;rank=1 Chromosome ena CDS 1105116 1106276 . + 0 ID=CDS:Rv0988;Parent=transcript:Rv0988;protein_id=Rv0988 ### -Chromosome ena gene 1106405 1107382 . - . ID=gene:Rv0989c;Name=grcC2;biotype=protein_coding;description=Probable polyprenyl-diphosphate synthase GrcC2 (polyprenyl pyrophosphate synthetase);gene_id=Rv0989c;logic_name=ena +Chromosome ena gene 1106405 1107382 . - . ID=gene:Rv0989c;Name=grcC2;biotype=protein_coding;description=Probable polyprenyl-diphosphate synthase GrcC2 (polyprenyl pyrophosphate synthetase);gene_id=Rv0989c;logic_name=ena Chromosome ena mRNA 1106405 1107382 . - . ID=transcript:Rv0989c;Parent=gene:Rv0989c;Name=grcC2-1;biotype=protein_coding;transcript_id=Rv0989c Chromosome ena exon 1106405 1107382 . - . Parent=transcript:Rv0989c;Name=Rv0989c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0989c-1;rank=1 Chromosome ena CDS 1106405 1107382 . - 0 ID=CDS:Rv0989c;Parent=transcript:Rv0989c;protein_id=Rv0989c ### -Chromosome ena gene 1107443 1108099 . - . ID=gene:Rv0990c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0990c;logic_name=ena +Chromosome ena gene 1107443 1108099 . - . ID=gene:Rv0990c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0990c;logic_name=ena Chromosome ena mRNA 1107443 1108099 . - . ID=transcript:Rv0990c;Parent=gene:Rv0990c;biotype=protein_coding;transcript_id=Rv0990c Chromosome ena exon 1107443 1108099 . - . Parent=transcript:Rv0990c;Name=Rv0990c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0990c-1;rank=1 Chromosome ena CDS 1107443 1108099 . - 0 ID=CDS:Rv0990c;Parent=transcript:Rv0990c;protein_id=Rv0990c ### -Chromosome ena gene 1108172 1108504 . - . ID=gene:Rv0991c;biotype=protein_coding;description=Conserved serine rich protein;gene_id=Rv0991c;logic_name=ena +Chromosome ena gene 1108172 1108504 . - . ID=gene:Rv0991c;biotype=protein_coding;description=Conserved serine rich protein;gene_id=Rv0991c;logic_name=ena Chromosome ena mRNA 1108172 1108504 . - . ID=transcript:Rv0991c;Parent=gene:Rv0991c;biotype=protein_coding;transcript_id=Rv0991c Chromosome ena exon 1108172 1108504 . - . Parent=transcript:Rv0991c;Name=Rv0991c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0991c-1;rank=1 Chromosome ena CDS 1108172 1108504 . - 0 ID=CDS:Rv0991c;Parent=transcript:Rv0991c;protein_id=Rv0991c ### -Chromosome ena gene 1108578 1109171 . - . ID=gene:Rv0992c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0992c;logic_name=ena +Chromosome ena gene 1108578 1109171 . - . ID=gene:Rv0992c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0992c;logic_name=ena Chromosome ena mRNA 1108578 1109171 . - . ID=transcript:Rv0992c;Parent=gene:Rv0992c;biotype=protein_coding;transcript_id=Rv0992c Chromosome ena exon 1108578 1109171 . - . Parent=transcript:Rv0992c;Name=Rv0992c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0992c-1;rank=1 Chromosome ena CDS 1108578 1109171 . - 0 ID=CDS:Rv0992c;Parent=transcript:Rv0992c;protein_id=Rv0992c ### -Chromosome ena gene 1109272 1110192 . + . ID=gene:Rv0993;Name=galU;biotype=protein_coding;description=UTP--glucose-1-phosphate uridylyltransferase GalU (UDP-glucose pyrophosphorylase) (UDPGP) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase);gene_id=Rv0993;logic_name=ena +Chromosome ena gene 1109272 1110192 . + . ID=gene:Rv0993;Name=galU;biotype=protein_coding;description=UTP--glucose-1-phosphate uridylyltransferase GalU (UDP-glucose pyrophosphorylase) (UDPGP) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase);gene_id=Rv0993;logic_name=ena Chromosome ena mRNA 1109272 1110192 . + . ID=transcript:Rv0993;Parent=gene:Rv0993;Name=galU-1;biotype=protein_coding;transcript_id=Rv0993 Chromosome ena exon 1109272 1110192 . + . Parent=transcript:Rv0993;Name=Rv0993-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0993-1;rank=1 Chromosome ena CDS 1109272 1110192 . + 0 ID=CDS:Rv0993;Parent=transcript:Rv0993;protein_id=Rv0993 ### -Chromosome ena gene 1110269 1111549 . + . ID=gene:Rv0994;Name=moeA1;biotype=protein_coding;description=Probable molybdopterin biosynthesis protein MoeA1;gene_id=Rv0994;logic_name=ena +Chromosome ena gene 1110269 1111549 . + . ID=gene:Rv0994;Name=moeA1;biotype=protein_coding;description=Probable molybdopterin biosynthesis protein MoeA1;gene_id=Rv0994;logic_name=ena Chromosome ena mRNA 1110269 1111549 . + . ID=transcript:Rv0994;Parent=gene:Rv0994;Name=moeA1-1;biotype=protein_coding;transcript_id=Rv0994 Chromosome ena exon 1110269 1111549 . + . Parent=transcript:Rv0994;Name=Rv0994-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0994-1;rank=1 Chromosome ena CDS 1110269 1111549 . + 0 ID=CDS:Rv0994;Parent=transcript:Rv0994;protein_id=Rv0994 ### -Chromosome ena gene 1111612 1112223 . + . ID=gene:Rv0995;Name=rimJ;biotype=protein_coding;description=Ribosomal-protein-alanine acetyltransferase RimJ (acetylating enzyme for N-terminal of ribosomal protein S5);gene_id=Rv0995;logic_name=ena +Chromosome ena gene 1111612 1112223 . + . ID=gene:Rv0995;Name=rimJ;biotype=protein_coding;description=Ribosomal-protein-alanine acetyltransferase RimJ (acetylating enzyme for N-terminal of ribosomal protein S5);gene_id=Rv0995;logic_name=ena Chromosome ena mRNA 1111612 1112223 . + . ID=transcript:Rv0995;Parent=gene:Rv0995;Name=rimJ-1;biotype=protein_coding;transcript_id=Rv0995 Chromosome ena exon 1111612 1112223 . + . Parent=transcript:Rv0995;Name=Rv0995-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0995-1;rank=1 Chromosome ena CDS 1111612 1112223 . + 0 ID=CDS:Rv0995;Parent=transcript:Rv0995;protein_id=Rv0995 ### -Chromosome ena gene 1112384 1113460 . + . ID=gene:Rv0996;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0996;logic_name=ena +Chromosome ena gene 1112384 1113460 . + . ID=gene:Rv0996;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv0996;logic_name=ena Chromosome ena mRNA 1112384 1113460 . + . ID=transcript:Rv0996;Parent=gene:Rv0996;biotype=protein_coding;transcript_id=Rv0996 Chromosome ena exon 1112384 1113460 . + . Parent=transcript:Rv0996;Name=Rv0996-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0996-1;rank=1 Chromosome ena CDS 1112384 1113460 . + 0 ID=CDS:Rv0996;Parent=transcript:Rv0996;protein_id=Rv0996 @@ -5228,112 +5228,112 @@ Chromosome ena transcript 1113511 1113583 . + . ID=transcript:EBG00000313370;Par Chromosome ena exon 1113511 1113583 . + . Parent=transcript:EBG00000313370;Name=EBG00000313370;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313370;rank=1 ### Chromosome ena_gene biological_region 1113511 1113583 . + . external_name=AL123456.3:gene:1113511..1113583;logic_name=ena_gene -Chromosome ena gene 1114293 1114724 . + . ID=gene:Rv0997;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0997;logic_name=ena +Chromosome ena gene 1114293 1114724 . + . ID=gene:Rv0997;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv0997;logic_name=ena Chromosome ena mRNA 1114293 1114724 . + . ID=transcript:Rv0997;Parent=gene:Rv0997;biotype=protein_coding;transcript_id=Rv0997 Chromosome ena exon 1114293 1114724 . + . Parent=transcript:Rv0997;Name=Rv0997-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0997-1;rank=1 Chromosome ena CDS 1114293 1114724 . + 0 ID=CDS:Rv0997;Parent=transcript:Rv0997;protein_id=Rv0997 ### -Chromosome ena gene 1114748 1115749 . + . ID=gene:Rv0998;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0998;logic_name=ena +Chromosome ena gene 1114748 1115749 . + . ID=gene:Rv0998;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv0998;logic_name=ena Chromosome ena mRNA 1114748 1115749 . + . ID=transcript:Rv0998;Parent=gene:Rv0998;biotype=protein_coding;transcript_id=Rv0998 Chromosome ena exon 1114748 1115749 . + . Parent=transcript:Rv0998;Name=Rv0998-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0998-1;rank=1 Chromosome ena CDS 1114748 1115749 . + 0 ID=CDS:Rv0998;Parent=transcript:Rv0998;protein_id=Rv0998 ### -Chromosome ena gene 1115767 1116525 . + . ID=gene:Rv0999;biotype=protein_coding;description=Unknown protein;gene_id=Rv0999;logic_name=ena +Chromosome ena gene 1115767 1116525 . + . ID=gene:Rv0999;biotype=protein_coding;description=Unknown protein;gene_id=Rv0999;logic_name=ena Chromosome ena mRNA 1115767 1116525 . + . ID=transcript:Rv0999;Parent=gene:Rv0999;biotype=protein_coding;transcript_id=Rv0999 Chromosome ena exon 1115767 1116525 . + . Parent=transcript:Rv0999;Name=Rv0999-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv0999-1;rank=1 Chromosome ena CDS 1115767 1116525 . + 0 ID=CDS:Rv0999;Parent=transcript:Rv0999;protein_id=Rv0999 ### -Chromosome ena gene 1116531 1117148 . - . ID=gene:Rv1000c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1000c;logic_name=ena +Chromosome ena gene 1116531 1117148 . - . ID=gene:Rv1000c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1000c;logic_name=ena Chromosome ena mRNA 1116531 1117148 . - . ID=transcript:Rv1000c;Parent=gene:Rv1000c;biotype=protein_coding;transcript_id=Rv1000c Chromosome ena exon 1116531 1117148 . - . Parent=transcript:Rv1000c;Name=Rv1000c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1000c-1;rank=1 Chromosome ena CDS 1116531 1117148 . - 0 ID=CDS:Rv1000c;Parent=transcript:Rv1000c;protein_id=Rv1000c ### -Chromosome ena gene 1117185 1118393 . + . ID=gene:Rv1001;Name=arcA;biotype=protein_coding;description=Probable arginine deiminase ArcA (adi) (ad) (arginine dihydrolase);gene_id=Rv1001;logic_name=ena +Chromosome ena gene 1117185 1118393 . + . ID=gene:Rv1001;Name=arcA;biotype=protein_coding;description=Probable arginine deiminase ArcA (adi) (ad) (arginine dihydrolase);gene_id=Rv1001;logic_name=ena Chromosome ena mRNA 1117185 1118393 . + . ID=transcript:Rv1001;Parent=gene:Rv1001;Name=arcA-1;biotype=protein_coding;transcript_id=Rv1001 Chromosome ena exon 1117185 1118393 . + . Parent=transcript:Rv1001;Name=Rv1001-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1001-1;rank=1 Chromosome ena CDS 1117185 1118393 . + 0 ID=CDS:Rv1001;Parent=transcript:Rv1001;protein_id=Rv1001 ### -Chromosome ena gene 1118428 1119939 . - . ID=gene:Rv1002c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1002c;logic_name=ena +Chromosome ena gene 1118428 1119939 . - . ID=gene:Rv1002c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1002c;logic_name=ena Chromosome ena mRNA 1118428 1119939 . - . ID=transcript:Rv1002c;Parent=gene:Rv1002c;biotype=protein_coding;transcript_id=Rv1002c Chromosome ena exon 1118428 1119939 . - . Parent=transcript:Rv1002c;Name=Rv1002c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1002c-1;rank=1 Chromosome ena CDS 1118428 1119939 . - 0 ID=CDS:Rv1002c;Parent=transcript:Rv1002c;protein_id=Rv1002c ### -Chromosome ena gene 1120022 1120879 . + . ID=gene:Rv1003;biotype=protein_coding;description=Conserved protein;gene_id=Rv1003;logic_name=ena +Chromosome ena gene 1120022 1120879 . + . ID=gene:Rv1003;biotype=protein_coding;description=Conserved protein;gene_id=Rv1003;logic_name=ena Chromosome ena mRNA 1120022 1120879 . + . ID=transcript:Rv1003;Parent=gene:Rv1003;biotype=protein_coding;transcript_id=Rv1003 Chromosome ena exon 1120022 1120879 . + . Parent=transcript:Rv1003;Name=Rv1003-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1003-1;rank=1 Chromosome ena CDS 1120022 1120879 . + 0 ID=CDS:Rv1003;Parent=transcript:Rv1003;protein_id=Rv1003 ### -Chromosome ena gene 1120889 1122148 . - . ID=gene:Rv1004c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1004c;logic_name=ena +Chromosome ena gene 1120889 1122148 . - . ID=gene:Rv1004c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1004c;logic_name=ena Chromosome ena mRNA 1120889 1122148 . - . ID=transcript:Rv1004c;Parent=gene:Rv1004c;biotype=protein_coding;transcript_id=Rv1004c Chromosome ena exon 1120889 1122148 . - . Parent=transcript:Rv1004c;Name=Rv1004c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1004c-1;rank=1 Chromosome ena CDS 1120889 1122148 . - 0 ID=CDS:Rv1004c;Parent=transcript:Rv1004c;protein_id=Rv1004c ### -Chromosome ena gene 1122222 1123598 . - . ID=gene:Rv1005c;Name=pabB;biotype=protein_coding;description=Probable para-aminobenzoate synthase component I PABD;gene_id=Rv1005c;logic_name=ena +Chromosome ena gene 1122222 1123598 . - . ID=gene:Rv1005c;Name=pabB;biotype=protein_coding;description=Probable para-aminobenzoate synthase component I PABD;gene_id=Rv1005c;logic_name=ena Chromosome ena mRNA 1122222 1123598 . - . ID=transcript:Rv1005c;Parent=gene:Rv1005c;Name=pabB-1;biotype=protein_coding;transcript_id=Rv1005c Chromosome ena exon 1122222 1123598 . - . Parent=transcript:Rv1005c;Name=Rv1005c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1005c-1;rank=1 Chromosome ena CDS 1122222 1123598 . - 0 ID=CDS:Rv1005c;Parent=transcript:Rv1005c;protein_id=Rv1005c ### -Chromosome ena gene 1123714 1125417 . + . ID=gene:Rv1006;biotype=protein_coding;description=Unknown protein;gene_id=Rv1006;logic_name=ena +Chromosome ena gene 1123714 1125417 . + . ID=gene:Rv1006;biotype=protein_coding;description=Unknown protein;gene_id=Rv1006;logic_name=ena Chromosome ena mRNA 1123714 1125417 . + . ID=transcript:Rv1006;Parent=gene:Rv1006;biotype=protein_coding;transcript_id=Rv1006 Chromosome ena exon 1123714 1125417 . + . Parent=transcript:Rv1006;Name=Rv1006-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1006-1;rank=1 Chromosome ena CDS 1123714 1125417 . + 0 ID=CDS:Rv1006;Parent=transcript:Rv1006;protein_id=Rv1006 ### -Chromosome ena gene 1125444 1127003 . - . ID=gene:Rv1007c;Name=metS;biotype=protein_coding;description=Methionyl-tRNA synthetase MetS (MetRS) (methionine--tRNA ligase);gene_id=Rv1007c;logic_name=ena +Chromosome ena gene 1125444 1127003 . - . ID=gene:Rv1007c;Name=metS;biotype=protein_coding;description=Methionyl-tRNA synthetase MetS (MetRS) (methionine--tRNA ligase);gene_id=Rv1007c;logic_name=ena Chromosome ena mRNA 1125444 1127003 . - . ID=transcript:Rv1007c;Parent=gene:Rv1007c;Name=metS-1;biotype=protein_coding;transcript_id=Rv1007c Chromosome ena exon 1125444 1127003 . - . Parent=transcript:Rv1007c;Name=Rv1007c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1007c-1;rank=1 Chromosome ena CDS 1125444 1127003 . - 0 ID=CDS:Rv1007c;Parent=transcript:Rv1007c;protein_id=Rv1007c ### -Chromosome ena gene 1127089 1127883 . + . ID=gene:Rv1008;Name=tatD;biotype=protein_coding;description=Probable deoxyribonuclease TatD (YJJV protein);gene_id=Rv1008;logic_name=ena +Chromosome ena gene 1127089 1127883 . + . ID=gene:Rv1008;Name=tatD;biotype=protein_coding;description=Probable deoxyribonuclease TatD (YJJV protein);gene_id=Rv1008;logic_name=ena Chromosome ena mRNA 1127089 1127883 . + . ID=transcript:Rv1008;Parent=gene:Rv1008;Name=tatD-1;biotype=protein_coding;transcript_id=Rv1008 Chromosome ena exon 1127089 1127883 . + . Parent=transcript:Rv1008;Name=Rv1008-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1008-1;rank=1 Chromosome ena CDS 1127089 1127883 . + 0 ID=CDS:Rv1008;Parent=transcript:Rv1008;protein_id=Rv1008 ### -Chromosome ena gene 1128091 1129179 . + . ID=gene:Rv1009;Name=rpfB;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfB;gene_id=Rv1009;logic_name=ena +Chromosome ena gene 1128091 1129179 . + . ID=gene:Rv1009;Name=rpfB;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfB;gene_id=Rv1009;logic_name=ena Chromosome ena mRNA 1128091 1129179 . + . ID=transcript:Rv1009;Parent=gene:Rv1009;Name=rpfB-1;biotype=protein_coding;transcript_id=Rv1009 Chromosome ena exon 1128091 1129179 . + . Parent=transcript:Rv1009;Name=Rv1009-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1009-1;rank=1 Chromosome ena CDS 1128091 1129179 . + 0 ID=CDS:Rv1009;Parent=transcript:Rv1009;protein_id=Rv1009 ### -Chromosome ena gene 1129152 1130105 . + . ID=gene:Rv1010;Name=ksgA;biotype=protein_coding;description=Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N'%2C N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase);gene_id=Rv1010;logic_name=ena +Chromosome ena gene 1129152 1130105 . + . ID=gene:Rv1010;Name=ksgA;biotype=protein_coding;description=Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N'%2C N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase);gene_id=Rv1010;logic_name=ena Chromosome ena mRNA 1129152 1130105 . + . ID=transcript:Rv1010;Parent=gene:Rv1010;Name=ksgA-1;biotype=protein_coding;transcript_id=Rv1010 Chromosome ena exon 1129152 1130105 . + . Parent=transcript:Rv1010;Name=Rv1010-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1010-1;rank=1 Chromosome ena CDS 1129152 1130105 . + 0 ID=CDS:Rv1010;Parent=transcript:Rv1010;protein_id=Rv1010 ### -Chromosome ena gene 1130191 1131111 . + . ID=gene:Rv1011;Name=ispE;biotype=protein_coding;description=Probable 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase);gene_id=Rv1011;logic_name=ena +Chromosome ena gene 1130191 1131111 . + . ID=gene:Rv1011;Name=ispE;biotype=protein_coding;description=Probable 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase);gene_id=Rv1011;logic_name=ena Chromosome ena mRNA 1130191 1131111 . + . ID=transcript:Rv1011;Parent=gene:Rv1011;Name=ispE-1;biotype=protein_coding;transcript_id=Rv1011 Chromosome ena exon 1130191 1131111 . + . Parent=transcript:Rv1011;Name=Rv1011-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1011-1;rank=1 Chromosome ena CDS 1130191 1131111 . + 0 ID=CDS:Rv1011;Parent=transcript:Rv1011;protein_id=Rv1011 ### -Chromosome ena gene 1131128 1131421 . + . ID=gene:Rv1012;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1012;logic_name=ena +Chromosome ena gene 1131128 1131421 . + . ID=gene:Rv1012;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1012;logic_name=ena Chromosome ena mRNA 1131128 1131421 . + . ID=transcript:Rv1012;Parent=gene:Rv1012;biotype=protein_coding;transcript_id=Rv1012 Chromosome ena exon 1131128 1131421 . + . Parent=transcript:Rv1012;Name=Rv1012-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1012-1;rank=1 Chromosome ena CDS 1131128 1131421 . + 0 ID=CDS:Rv1012;Parent=transcript:Rv1012;protein_id=Rv1012 ### -Chromosome ena gene 1131625 1133259 . + . ID=gene:Rv1013;Name=pks16;biotype=protein_coding;description=Putative polyketide synthase Pks16;gene_id=Rv1013;logic_name=ena +Chromosome ena gene 1131625 1133259 . + . ID=gene:Rv1013;Name=pks16;biotype=protein_coding;description=Putative polyketide synthase Pks16;gene_id=Rv1013;logic_name=ena Chromosome ena mRNA 1131625 1133259 . + . ID=transcript:Rv1013;Parent=gene:Rv1013;Name=pks16-1;biotype=protein_coding;transcript_id=Rv1013 Chromosome ena exon 1131625 1133259 . + . Parent=transcript:Rv1013;Name=Rv1013-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1013-1;rank=1 Chromosome ena CDS 1131625 1133259 . + 0 ID=CDS:Rv1013;Parent=transcript:Rv1013;protein_id=Rv1013 ### -Chromosome ena gene 1133333 1133908 . - . ID=gene:Rv1014c;Name=pth;biotype=protein_coding;description=Probable peptidyl-tRNA hydrolase Pth;gene_id=Rv1014c;logic_name=ena +Chromosome ena gene 1133333 1133908 . - . ID=gene:Rv1014c;Name=pth;biotype=protein_coding;description=Probable peptidyl-tRNA hydrolase Pth;gene_id=Rv1014c;logic_name=ena Chromosome ena mRNA 1133333 1133908 . - . ID=transcript:Rv1014c;Parent=gene:Rv1014c;Name=pth-1;biotype=protein_coding;transcript_id=Rv1014c Chromosome ena exon 1133333 1133908 . - . Parent=transcript:Rv1014c;Name=Rv1014c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1014c-1;rank=1 Chromosome ena CDS 1133333 1133908 . - 0 ID=CDS:Rv1014c;Parent=transcript:Rv1014c;protein_id=Rv1014c ### -Chromosome ena gene 1133921 1134568 . - . ID=gene:Rv1015c;Name=rplY;biotype=protein_coding;description=50S ribosomal protein L25 RplY;gene_id=Rv1015c;logic_name=ena +Chromosome ena gene 1133921 1134568 . - . ID=gene:Rv1015c;Name=rplY;biotype=protein_coding;description=50S ribosomal protein L25 RplY;gene_id=Rv1015c;logic_name=ena Chromosome ena mRNA 1133921 1134568 . - . ID=transcript:Rv1015c;Parent=gene:Rv1015c;Name=rplY-1;biotype=protein_coding;transcript_id=Rv1015c Chromosome ena exon 1133921 1134568 . - . Parent=transcript:Rv1015c;Name=Rv1015c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1015c-1;rank=1 Chromosome ena CDS 1133921 1134568 . - 0 ID=CDS:Rv1015c;Parent=transcript:Rv1015c;protein_id=Rv1015c ### -Chromosome ena gene 1134785 1135465 . - . ID=gene:Rv1016c;Name=lpqT;biotype=protein_coding;description=Probable conserved lipoprotein LpqT;gene_id=Rv1016c;logic_name=ena +Chromosome ena gene 1134785 1135465 . - . ID=gene:Rv1016c;Name=lpqT;biotype=protein_coding;description=Probable conserved lipoprotein LpqT;gene_id=Rv1016c;logic_name=ena Chromosome ena mRNA 1134785 1135465 . - . ID=transcript:Rv1016c;Parent=gene:Rv1016c;Name=lpqT-1;biotype=protein_coding;transcript_id=Rv1016c Chromosome ena exon 1134785 1135465 . - . Parent=transcript:Rv1016c;Name=Rv1016c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1016c-1;rank=1 Chromosome ena CDS 1134785 1135465 . - 0 ID=CDS:Rv1016c;Parent=transcript:Rv1016c;protein_id=Rv1016c ### -Chromosome ena gene 1135501 1136481 . - . ID=gene:Rv1017c;Name=prsA;biotype=protein_coding;description=Probable ribose-phosphate pyrophosphokinase PrsA (phosphoribosyl pyrophosphate synthetase) (PRPP synthetase);gene_id=Rv1017c;logic_name=ena +Chromosome ena gene 1135501 1136481 . - . ID=gene:Rv1017c;Name=prsA;biotype=protein_coding;description=Probable ribose-phosphate pyrophosphokinase PrsA (phosphoribosyl pyrophosphate synthetase) (PRPP synthetase);gene_id=Rv1017c;logic_name=ena Chromosome ena mRNA 1135501 1136481 . - . ID=transcript:Rv1017c;Parent=gene:Rv1017c;Name=prsA-1;biotype=protein_coding;transcript_id=Rv1017c Chromosome ena exon 1135501 1136481 . - . Parent=transcript:Rv1017c;Name=Rv1017c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1017c-1;rank=1 Chromosome ena CDS 1135501 1136481 . - 0 ID=CDS:Rv1017c;Parent=transcript:Rv1017c;protein_id=Rv1017c ### -Chromosome ena gene 1136573 1138060 . - . ID=gene:Rv1018c;Name=glmU;biotype=protein_coding;description=Probable UDP-N-acetylglucosamine pyrophosphorylase GlmU;gene_id=Rv1018c;logic_name=ena +Chromosome ena gene 1136573 1138060 . - . ID=gene:Rv1018c;Name=glmU;biotype=protein_coding;description=Probable UDP-N-acetylglucosamine pyrophosphorylase GlmU;gene_id=Rv1018c;logic_name=ena Chromosome ena mRNA 1136573 1138060 . - . ID=transcript:Rv1018c;Parent=gene:Rv1018c;Name=glmU-1;biotype=protein_coding;transcript_id=Rv1018c Chromosome ena exon 1136573 1138060 . - . Parent=transcript:Rv1018c;Name=Rv1018c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1018c-1;rank=1 Chromosome ena CDS 1136573 1138060 . - 0 ID=CDS:Rv1018c;Parent=transcript:Rv1018c;protein_id=Rv1018c @@ -5343,175 +5343,175 @@ Chromosome ena transcript 1138076 1138147 . - . ID=transcript:EBG00000313319;Par Chromosome ena exon 1138076 1138147 . - . Parent=transcript:EBG00000313319;Name=EBG00000313319;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313319;rank=1 ### Chromosome ena_gene biological_region 1138076 1138147 . - . external_name=AL123456.3:gene:complement(1138076..1138147);logic_name=ena_gene -Chromosome ena gene 1138315 1138908 . + . ID=gene:Rv1019;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv1019;logic_name=ena +Chromosome ena gene 1138315 1138908 . + . ID=gene:Rv1019;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv1019;logic_name=ena Chromosome ena mRNA 1138315 1138908 . + . ID=transcript:Rv1019;Parent=gene:Rv1019;biotype=protein_coding;transcript_id=Rv1019 Chromosome ena exon 1138315 1138908 . + . Parent=transcript:Rv1019;Name=Rv1019-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1019-1;rank=1 Chromosome ena CDS 1138315 1138908 . + 0 ID=CDS:Rv1019;Parent=transcript:Rv1019;protein_id=Rv1019 ### -Chromosome ena gene 1138967 1142671 . + . ID=gene:Rv1020;Name=mfd;biotype=protein_coding;description=Probable transcription-repair coupling factor Mfd (TRCF);gene_id=Rv1020;logic_name=ena +Chromosome ena gene 1138967 1142671 . + . ID=gene:Rv1020;Name=mfd;biotype=protein_coding;description=Probable transcription-repair coupling factor Mfd (TRCF);gene_id=Rv1020;logic_name=ena Chromosome ena mRNA 1138967 1142671 . + . ID=transcript:Rv1020;Parent=gene:Rv1020;Name=mfd-1;biotype=protein_coding;transcript_id=Rv1020 Chromosome ena exon 1138967 1142671 . + . Parent=transcript:Rv1020;Name=Rv1020-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1020-1;rank=1 Chromosome ena CDS 1138967 1142671 . + 0 ID=CDS:Rv1020;Parent=transcript:Rv1020;protein_id=Rv1020 ### -Chromosome ena gene 1142671 1143648 . + . ID=gene:Rv1021;biotype=protein_coding;description=Conserved protein;gene_id=Rv1021;logic_name=ena +Chromosome ena gene 1142671 1143648 . + . ID=gene:Rv1021;biotype=protein_coding;description=Conserved protein;gene_id=Rv1021;logic_name=ena Chromosome ena mRNA 1142671 1143648 . + . ID=transcript:Rv1021;Parent=gene:Rv1021;biotype=protein_coding;transcript_id=Rv1021 Chromosome ena exon 1142671 1143648 . + . Parent=transcript:Rv1021;Name=Rv1021-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1021-1;rank=1 Chromosome ena CDS 1142671 1143648 . + 0 ID=CDS:Rv1021;Parent=transcript:Rv1021;protein_id=Rv1021 ### -Chromosome ena gene 1143736 1144467 . + . ID=gene:Rv1022;Name=lpqU;biotype=protein_coding;description=Probable conserved lipoprotein LpqU;gene_id=Rv1022;logic_name=ena +Chromosome ena gene 1143736 1144467 . + . ID=gene:Rv1022;Name=lpqU;biotype=protein_coding;description=Probable conserved lipoprotein LpqU;gene_id=Rv1022;logic_name=ena Chromosome ena mRNA 1143736 1144467 . + . ID=transcript:Rv1022;Parent=gene:Rv1022;Name=lpqU-1;biotype=protein_coding;transcript_id=Rv1022 Chromosome ena exon 1143736 1144467 . + . Parent=transcript:Rv1022;Name=Rv1022-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1022-1;rank=1 Chromosome ena CDS 1143736 1144467 . + 0 ID=CDS:Rv1022;Parent=transcript:Rv1022;protein_id=Rv1022 ### -Chromosome ena gene 1144564 1145853 . + . ID=gene:Rv1023;Name=eno;biotype=protein_coding;description=Probable enolase Eno;gene_id=Rv1023;logic_name=ena +Chromosome ena gene 1144564 1145853 . + . ID=gene:Rv1023;Name=eno;biotype=protein_coding;description=Probable enolase Eno;gene_id=Rv1023;logic_name=ena Chromosome ena mRNA 1144564 1145853 . + . ID=transcript:Rv1023;Parent=gene:Rv1023;Name=eno-1;biotype=protein_coding;transcript_id=Rv1023 Chromosome ena exon 1144564 1145853 . + . Parent=transcript:Rv1023;Name=Rv1023-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1023-1;rank=1 Chromosome ena CDS 1144564 1145853 . + 0 ID=CDS:Rv1023;Parent=transcript:Rv1023;protein_id=Rv1023 ### -Chromosome ena gene 1145858 1146544 . + . ID=gene:Rv1024;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1024;logic_name=ena +Chromosome ena gene 1145858 1146544 . + . ID=gene:Rv1024;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1024;logic_name=ena Chromosome ena mRNA 1145858 1146544 . + . ID=transcript:Rv1024;Parent=gene:Rv1024;biotype=protein_coding;transcript_id=Rv1024 Chromosome ena exon 1145858 1146544 . + . Parent=transcript:Rv1024;Name=Rv1024-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1024-1;rank=1 Chromosome ena CDS 1145858 1146544 . + 0 ID=CDS:Rv1024;Parent=transcript:Rv1024;protein_id=Rv1024 ### -Chromosome ena gene 1146561 1147028 . + . ID=gene:Rv1025;biotype=protein_coding;description=Conserved protein;gene_id=Rv1025;logic_name=ena +Chromosome ena gene 1146561 1147028 . + . ID=gene:Rv1025;biotype=protein_coding;description=Conserved protein;gene_id=Rv1025;logic_name=ena Chromosome ena mRNA 1146561 1147028 . + . ID=transcript:Rv1025;Parent=gene:Rv1025;biotype=protein_coding;transcript_id=Rv1025 Chromosome ena exon 1146561 1147028 . + . Parent=transcript:Rv1025;Name=Rv1025-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1025-1;rank=1 Chromosome ena CDS 1146561 1147028 . + 0 ID=CDS:Rv1025;Parent=transcript:Rv1025;protein_id=Rv1025 ### -Chromosome ena gene 1147019 1147978 . + . ID=gene:Rv1026;biotype=protein_coding;description=Conserved protein;gene_id=Rv1026;logic_name=ena +Chromosome ena gene 1147019 1147978 . + . ID=gene:Rv1026;biotype=protein_coding;description=Conserved protein;gene_id=Rv1026;logic_name=ena Chromosome ena mRNA 1147019 1147978 . + . ID=transcript:Rv1026;Parent=gene:Rv1026;biotype=protein_coding;transcript_id=Rv1026 Chromosome ena exon 1147019 1147978 . + . Parent=transcript:Rv1026;Name=Rv1026-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1026-1;rank=1 Chromosome ena CDS 1147019 1147978 . + 0 ID=CDS:Rv1026;Parent=transcript:Rv1026;protein_id=Rv1026 ### -Chromosome ena gene 1148427 1149107 . - . ID=gene:Rv1027c;Name=kdpE;biotype=protein_coding;description=Probable transcriptional regulatory protein KdpE;gene_id=Rv1027c;logic_name=ena +Chromosome ena gene 1148427 1149107 . - . ID=gene:Rv1027c;Name=kdpE;biotype=protein_coding;description=Probable transcriptional regulatory protein KdpE;gene_id=Rv1027c;logic_name=ena Chromosome ena mRNA 1148427 1149107 . - . ID=transcript:Rv1027c;Parent=gene:Rv1027c;Name=kdpE-1;biotype=protein_coding;transcript_id=Rv1027c Chromosome ena exon 1148427 1149107 . - . Parent=transcript:Rv1027c;Name=Rv1027c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1027c-1;rank=1 Chromosome ena CDS 1148427 1149107 . - 0 ID=CDS:Rv1027c;Parent=transcript:Rv1027c;protein_id=Rv1027c ### -Chromosome ena gene 1149104 1151686 . - . ID=gene:Rv1028c;Name=kdpD;biotype=protein_coding;description=Probable sensor protein KdpD;gene_id=Rv1028c;logic_name=ena +Chromosome ena gene 1149104 1151686 . - . ID=gene:Rv1028c;Name=kdpD;biotype=protein_coding;description=Probable sensor protein KdpD;gene_id=Rv1028c;logic_name=ena Chromosome ena mRNA 1149104 1151686 . - . ID=transcript:Rv1028c;Parent=gene:Rv1028c;Name=kdpD-1;biotype=protein_coding;transcript_id=Rv1028c Chromosome ena exon 1149104 1151686 . - . Parent=transcript:Rv1028c;Name=Rv1028c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1028c-1;rank=1 Chromosome ena CDS 1149104 1151686 . - 0 ID=CDS:Rv1028c;Parent=transcript:Rv1028c;protein_id=Rv1028c ### -Chromosome ena gene 1151920 1152012 . + . ID=gene:Rv1028A;Name=kdpF;biotype=protein_coding;description=Probable membrane protein KdpF;gene_id=Rv1028A;logic_name=ena +Chromosome ena gene 1151920 1152012 . + . ID=gene:Rv1028A;Name=kdpF;biotype=protein_coding;description=Probable membrane protein KdpF;gene_id=Rv1028A;logic_name=ena Chromosome ena mRNA 1151920 1152012 . + . ID=transcript:Rv1028A;Parent=gene:Rv1028A;Name=kdpF-1;biotype=protein_coding;transcript_id=Rv1028A Chromosome ena exon 1151920 1152012 . + . Parent=transcript:Rv1028A;Name=Rv1028A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1028A-1;rank=1 Chromosome ena CDS 1151920 1152012 . + 0 ID=CDS:Rv1028A;Parent=transcript:Rv1028A;protein_id=Rv1028A ### -Chromosome ena gene 1152012 1153727 . + . ID=gene:Rv1029;Name=kdpA;biotype=protein_coding;description=Probable potassium-transporting ATPase a chain KdpA (potassium-translocating ATPase a chain) (ATP phosphohydrolase [potassium-transporting] a chain) (potassium binding and translocating subunit A);gene_id=Rv1029;logic_name=ena +Chromosome ena gene 1152012 1153727 . + . ID=gene:Rv1029;Name=kdpA;biotype=protein_coding;description=Probable potassium-transporting ATPase a chain KdpA (potassium-translocating ATPase a chain) (ATP phosphohydrolase [potassium-transporting] a chain) (potassium binding and translocating subunit A);gene_id=Rv1029;logic_name=ena Chromosome ena mRNA 1152012 1153727 . + . ID=transcript:Rv1029;Parent=gene:Rv1029;Name=kdpA-1;biotype=protein_coding;transcript_id=Rv1029 Chromosome ena exon 1152012 1153727 . + . Parent=transcript:Rv1029;Name=Rv1029-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1029-1;rank=1 Chromosome ena CDS 1152012 1153727 . + 0 ID=CDS:Rv1029;Parent=transcript:Rv1029;protein_id=Rv1029 ### -Chromosome ena gene 1153724 1155853 . + . ID=gene:Rv1030;Name=kdpB;biotype=protein_coding;description=Probable potassium-transporting P-type ATPase B chain KdpB (potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (potassium binding and translocating subunit B);gene_id=Rv1030;logic_name=ena +Chromosome ena gene 1153724 1155853 . + . ID=gene:Rv1030;Name=kdpB;biotype=protein_coding;description=Probable potassium-transporting P-type ATPase B chain KdpB (potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (potassium binding and translocating subunit B);gene_id=Rv1030;logic_name=ena Chromosome ena mRNA 1153724 1155853 . + . ID=transcript:Rv1030;Parent=gene:Rv1030;Name=kdpB-1;biotype=protein_coding;transcript_id=Rv1030 Chromosome ena exon 1153724 1155853 . + . Parent=transcript:Rv1030;Name=Rv1030-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1030-1;rank=1 Chromosome ena CDS 1153724 1155853 . + 0 ID=CDS:Rv1030;Parent=transcript:Rv1030;protein_id=Rv1030 ### -Chromosome ena gene 1155853 1156422 . + . ID=gene:Rv1031;Name=kdpC;biotype=protein_coding;description=Probable potassium-transporting ATPase C chain KdpC (potassium-translocating ATPase C chain) (ATP phosphohydrolase [potassium-transporting] C chain) (potassium binding and translocating subunit C);gene_id=Rv1031;logic_name=ena +Chromosome ena gene 1155853 1156422 . + . ID=gene:Rv1031;Name=kdpC;biotype=protein_coding;description=Probable potassium-transporting ATPase C chain KdpC (potassium-translocating ATPase C chain) (ATP phosphohydrolase [potassium-transporting] C chain) (potassium binding and translocating subunit C);gene_id=Rv1031;logic_name=ena Chromosome ena mRNA 1155853 1156422 . + . ID=transcript:Rv1031;Parent=gene:Rv1031;Name=kdpC-1;biotype=protein_coding;transcript_id=Rv1031 Chromosome ena exon 1155853 1156422 . + . Parent=transcript:Rv1031;Name=Rv1031-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1031-1;rank=1 Chromosome ena CDS 1155853 1156422 . + 0 ID=CDS:Rv1031;Parent=transcript:Rv1031;protein_id=Rv1031 ### -Chromosome ena gene 1156426 1157955 . - . ID=gene:Rv1032c;Name=trcS;biotype=protein_coding;description=Two component sensor histidine kinase TrcS;gene_id=Rv1032c;logic_name=ena +Chromosome ena gene 1156426 1157955 . - . ID=gene:Rv1032c;Name=trcS;biotype=protein_coding;description=Two component sensor histidine kinase TrcS;gene_id=Rv1032c;logic_name=ena Chromosome ena mRNA 1156426 1157955 . - . ID=transcript:Rv1032c;Parent=gene:Rv1032c;Name=trcS-1;biotype=protein_coding;transcript_id=Rv1032c Chromosome ena exon 1156426 1157955 . - . Parent=transcript:Rv1032c;Name=Rv1032c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1032c-1;rank=1 Chromosome ena CDS 1156426 1157955 . - 0 ID=CDS:Rv1032c;Parent=transcript:Rv1032c;protein_id=Rv1032c ### -Chromosome ena gene 1157963 1158736 . - . ID=gene:Rv1033c;Name=trcR;biotype=protein_coding;description=Two component transcriptional regulator TrcR;gene_id=Rv1033c;logic_name=ena +Chromosome ena gene 1157963 1158736 . - . ID=gene:Rv1033c;Name=trcR;biotype=protein_coding;description=Two component transcriptional regulator TrcR;gene_id=Rv1033c;logic_name=ena Chromosome ena mRNA 1157963 1158736 . - . ID=transcript:Rv1033c;Parent=gene:Rv1033c;Name=trcR-1;biotype=protein_coding;transcript_id=Rv1033c Chromosome ena exon 1157963 1158736 . - . Parent=transcript:Rv1033c;Name=Rv1033c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1033c-1;rank=1 Chromosome ena CDS 1157963 1158736 . - 0 ID=CDS:Rv1033c;Parent=transcript:Rv1033c;protein_id=Rv1033c ### -Chromosome ena gene 1158918 1159307 . - . ID=gene:Rv1034c;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv1034c;logic_name=ena +Chromosome ena gene 1158918 1159307 . - . ID=gene:Rv1034c;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv1034c;logic_name=ena Chromosome ena mRNA 1158918 1159307 . - . ID=transcript:Rv1034c;Parent=gene:Rv1034c;biotype=protein_coding;transcript_id=Rv1034c Chromosome ena exon 1158918 1159307 . - . Parent=transcript:Rv1034c;Name=Rv1034c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1034c-1;rank=1 Chromosome ena CDS 1158918 1159307 . - 0 ID=CDS:Rv1034c;Parent=transcript:Rv1034c;protein_id=Rv1034c ### -Chromosome ena_mobile_element biological_region 1158921 1160433 . - . external_name=IS1560-1%2C len: 1513 nt. Insertion sequence IS1560.;logic_name=ena_mobile_element -Chromosome ena gene 1159375 1160061 . - . ID=gene:Rv1035c;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv1035c;logic_name=ena +Chromosome ena_mobile_element biological_region 1158921 1160433 . - . external_name=IS1560-1%2C len: 1513 nt. Insertion sequence IS1560.;logic_name=ena_mobile_element +Chromosome ena gene 1159375 1160061 . - . ID=gene:Rv1035c;biotype=protein_coding;description=Probable transposase (fragment);gene_id=Rv1035c;logic_name=ena Chromosome ena mRNA 1159375 1160061 . - . ID=transcript:Rv1035c;Parent=gene:Rv1035c;biotype=protein_coding;transcript_id=Rv1035c Chromosome ena exon 1159375 1160061 . - . Parent=transcript:Rv1035c;Name=Rv1035c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1035c-1;rank=1 Chromosome ena CDS 1159375 1160061 . - 0 ID=CDS:Rv1035c;Parent=transcript:Rv1035c;protein_id=Rv1035c ### -Chromosome ena gene 1160095 1160433 . - . ID=gene:Rv1036c;biotype=protein_coding;description=Probable IS1560 transposase (fragment);gene_id=Rv1036c;logic_name=ena +Chromosome ena gene 1160095 1160433 . - . ID=gene:Rv1036c;biotype=protein_coding;description=Probable IS1560 transposase (fragment);gene_id=Rv1036c;logic_name=ena Chromosome ena mRNA 1160095 1160433 . - . ID=transcript:Rv1036c;Parent=gene:Rv1036c;biotype=protein_coding;transcript_id=Rv1036c Chromosome ena exon 1160095 1160433 . - . Parent=transcript:Rv1036c;Name=Rv1036c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1036c-1;rank=1 Chromosome ena CDS 1160095 1160433 . - 0 ID=CDS:Rv1036c;Parent=transcript:Rv1036c;protein_id=Rv1036c ### -Chromosome ena gene 1160544 1160828 . - . ID=gene:Rv1037c;Name=esxI;biotype=protein_coding;description=Putative ESAT-6 like protein EsxI (ESAT-6 like protein 1);gene_id=Rv1037c;logic_name=ena +Chromosome ena gene 1160544 1160828 . - . ID=gene:Rv1037c;Name=esxI;biotype=protein_coding;description=Putative ESAT-6 like protein EsxI (ESAT-6 like protein 1);gene_id=Rv1037c;logic_name=ena Chromosome ena mRNA 1160544 1160828 . - . ID=transcript:Rv1037c;Parent=gene:Rv1037c;Name=esxI-1;biotype=protein_coding;transcript_id=Rv1037c Chromosome ena exon 1160544 1160828 . - . Parent=transcript:Rv1037c;Name=Rv1037c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1037c-1;rank=1 Chromosome ena CDS 1160544 1160828 . - 0 ID=CDS:Rv1037c;Parent=transcript:Rv1037c;protein_id=Rv1037c ### -Chromosome ena gene 1160855 1161151 . - . ID=gene:Rv1038c;Name=esxJ;biotype=protein_coding;description=ESAT-6 like protein EsxJ (ESAT-6 like protein 2);gene_id=Rv1038c;logic_name=ena +Chromosome ena gene 1160855 1161151 . - . ID=gene:Rv1038c;Name=esxJ;biotype=protein_coding;description=ESAT-6 like protein EsxJ (ESAT-6 like protein 2);gene_id=Rv1038c;logic_name=ena Chromosome ena mRNA 1160855 1161151 . - . ID=transcript:Rv1038c;Parent=gene:Rv1038c;Name=esxJ-1;biotype=protein_coding;transcript_id=Rv1038c Chromosome ena exon 1160855 1161151 . - . Parent=transcript:Rv1038c;Name=Rv1038c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1038c-1;rank=1 Chromosome ena CDS 1160855 1161151 . - 0 ID=CDS:Rv1038c;Parent=transcript:Rv1038c;protein_id=Rv1038c ### -Chromosome ena gene 1161297 1162472 . - . ID=gene:Rv1039c;Name=PPE15;biotype=protein_coding;description=PPE family protein PPE15;gene_id=Rv1039c;logic_name=ena +Chromosome ena gene 1161297 1162472 . - . ID=gene:Rv1039c;Name=PPE15;biotype=protein_coding;description=PPE family protein PPE15;gene_id=Rv1039c;logic_name=ena Chromosome ena mRNA 1161297 1162472 . - . ID=transcript:Rv1039c;Parent=gene:Rv1039c;Name=PPE15-1;biotype=protein_coding;transcript_id=Rv1039c Chromosome ena exon 1161297 1162472 . - . Parent=transcript:Rv1039c;Name=Rv1039c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1039c-1;rank=1 Chromosome ena CDS 1161297 1162472 . - 0 ID=CDS:Rv1039c;Parent=transcript:Rv1039c;protein_id=Rv1039c ### -Chromosome ena gene 1162549 1163376 . - . ID=gene:Rv1040c;Name=PE8;biotype=protein_coding;description=PE family protein PE8;gene_id=Rv1040c;logic_name=ena +Chromosome ena gene 1162549 1163376 . - . ID=gene:Rv1040c;Name=PE8;biotype=protein_coding;description=PE family protein PE8;gene_id=Rv1040c;logic_name=ena Chromosome ena mRNA 1162549 1163376 . - . ID=transcript:Rv1040c;Parent=gene:Rv1040c;Name=PE8-1;biotype=protein_coding;transcript_id=Rv1040c Chromosome ena exon 1162549 1163376 . - . Parent=transcript:Rv1040c;Name=Rv1040c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1040c-1;rank=1 Chromosome ena CDS 1162549 1163376 . - 0 ID=CDS:Rv1040c;Parent=transcript:Rv1040c;protein_id=Rv1040c ### -Chromosome ena gene 1164572 1165435 . - . ID=gene:Rv1041c;biotype=protein_coding;description=Probable is like-2 transposase;gene_id=Rv1041c;logic_name=ena +Chromosome ena gene 1164572 1165435 . - . ID=gene:Rv1041c;biotype=protein_coding;description=Probable is like-2 transposase;gene_id=Rv1041c;logic_name=ena Chromosome ena mRNA 1164572 1165435 . - . ID=transcript:Rv1041c;Parent=gene:Rv1041c;biotype=protein_coding;transcript_id=Rv1041c Chromosome ena exon 1164572 1165435 . - . Parent=transcript:Rv1041c;Name=Rv1041c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1041c-1;rank=1 Chromosome ena CDS 1164572 1165435 . - 0 ID=CDS:Rv1041c;Parent=transcript:Rv1041c;protein_id=Rv1041c ### -Chromosome ena_mobile_element biological_region 1164572 1165549 . - . external_name=IS-LIKE-1%2C len: 978 nt. Insertion sequence%2C ISLIKE%2Cregion identical to cosmid y348%2C blast score%3D 4902 (+1) 9377 10354 EM_NEW:MTAD20 Ad000020 Mycobacterium tuberculosis sequence from clone y348. This region is a possible MT-complex-specific genomic isla...;logic_name=ena_mobile_element -Chromosome ena gene 1165092 1165499 . - . ID=gene:Rv1042c;biotype=protein_coding;description=Probable is like-2 transposase;gene_id=Rv1042c;logic_name=ena +Chromosome ena_mobile_element biological_region 1164572 1165549 . - . external_name=IS-LIKE-1%2C len: 978 nt. Insertion sequence%2C ISLIKE%2Cregion identical to cosmid y348%2C blast score%3D 4902 (+1) 9377 10354 EM_NEW:MTAD20 Ad000020 Mycobacterium tuberculosis sequence from clone y348. This region is a possible MT-complex-specific genomic isla...;logic_name=ena_mobile_element +Chromosome ena gene 1165092 1165499 . - . ID=gene:Rv1042c;biotype=protein_coding;description=Probable is like-2 transposase;gene_id=Rv1042c;logic_name=ena Chromosome ena mRNA 1165092 1165499 . - . ID=transcript:Rv1042c;Parent=gene:Rv1042c;biotype=protein_coding;transcript_id=Rv1042c Chromosome ena exon 1165092 1165499 . - . Parent=transcript:Rv1042c;Name=Rv1042c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1042c-1;rank=1 Chromosome ena CDS 1165092 1165499 . - 0 ID=CDS:Rv1042c;Parent=transcript:Rv1042c;protein_id=Rv1042c ### -Chromosome ena gene 1165781 1166806 . - . ID=gene:Rv1043c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1043c;logic_name=ena +Chromosome ena gene 1165781 1166806 . - . ID=gene:Rv1043c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1043c;logic_name=ena Chromosome ena mRNA 1165781 1166806 . - . ID=transcript:Rv1043c;Parent=gene:Rv1043c;biotype=protein_coding;transcript_id=Rv1043c Chromosome ena exon 1165781 1166806 . - . Parent=transcript:Rv1043c;Name=Rv1043c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1043c-1;rank=1 Chromosome ena CDS 1165781 1166806 . - 0 ID=CDS:Rv1043c;Parent=transcript:Rv1043c;protein_id=Rv1043c ### -Chromosome ena gene 1167053 1167676 . + . ID=gene:Rv1044;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1044;logic_name=ena +Chromosome ena gene 1167053 1167676 . + . ID=gene:Rv1044;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1044;logic_name=ena Chromosome ena mRNA 1167053 1167676 . + . ID=transcript:Rv1044;Parent=gene:Rv1044;biotype=protein_coding;transcript_id=Rv1044 Chromosome ena exon 1167053 1167676 . + . Parent=transcript:Rv1044;Name=Rv1044-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1044-1;rank=1 Chromosome ena CDS 1167053 1167676 . + 0 ID=CDS:Rv1044;Parent=transcript:Rv1044;protein_id=Rv1044 ### -Chromosome ena gene 1167673 1168554 . + . ID=gene:Rv1045;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1045;logic_name=ena +Chromosome ena gene 1167673 1168554 . + . ID=gene:Rv1045;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1045;logic_name=ena Chromosome ena mRNA 1167673 1168554 . + . ID=transcript:Rv1045;Parent=gene:Rv1045;biotype=protein_coding;transcript_id=Rv1045 Chromosome ena exon 1167673 1168554 . + . Parent=transcript:Rv1045;Name=Rv1045-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1045-1;rank=1 Chromosome ena CDS 1167673 1168554 . + 0 ID=CDS:Rv1045;Parent=transcript:Rv1045;protein_id=Rv1045 ### -Chromosome ena gene 1168704 1169228 . - . ID=gene:Rv1046c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1046c;logic_name=ena +Chromosome ena gene 1168704 1169228 . - . ID=gene:Rv1046c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1046c;logic_name=ena Chromosome ena mRNA 1168704 1169228 . - . ID=transcript:Rv1046c;Parent=gene:Rv1046c;biotype=protein_coding;transcript_id=Rv1046c Chromosome ena exon 1168704 1169228 . - . Parent=transcript:Rv1046c;Name=Rv1046c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1046c-1;rank=1 Chromosome ena CDS 1168704 1169228 . - 0 ID=CDS:Rv1046c;Parent=transcript:Rv1046c;protein_id=Rv1046c ### -Chromosome ena_mobile_element biological_region 1169298 1170732 . + . external_name=IS1081-1%2C len: 1435 nt. Insertion sequence IS1081%2Calmost identical to Mycobacterium bovis IS1081 (7157 (-1) 60 14 94 EM_BA:MBBIS1081 X84741 Mycobacterium bovis BCG IS1081 DNA. 4/96. This region is a possible MT-complex-specific genomic island (See Becq...;logic_name=ena_mobile_element -Chromosome ena gene 1169423 1170670 . + . ID=gene:Rv1047;biotype=protein_coding;description=Probable transposase;gene_id=Rv1047;logic_name=ena +Chromosome ena_mobile_element biological_region 1169298 1170732 . + . external_name=IS1081-1%2C len: 1435 nt. Insertion sequence IS1081%2Calmost identical to Mycobacterium bovis IS1081 (7157 (-1) 60 14 94 EM_BA:MBBIS1081 X84741 Mycobacterium bovis BCG IS1081 DNA. 4/96. This region is a possible MT-complex-specific genomic island (See Becq...;logic_name=ena_mobile_element +Chromosome ena gene 1169423 1170670 . + . ID=gene:Rv1047;biotype=protein_coding;description=Probable transposase;gene_id=Rv1047;logic_name=ena Chromosome ena mRNA 1169423 1170670 . + . ID=transcript:Rv1047;Parent=gene:Rv1047;biotype=protein_coding;transcript_id=Rv1047 Chromosome ena exon 1169423 1170670 . + . Parent=transcript:Rv1047;Name=Rv1047-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1047-1;rank=1 Chromosome ena CDS 1169423 1170670 . + 0 ID=CDS:Rv1047;Parent=transcript:Rv1047;protein_id=Rv1047 ### -Chromosome ena gene 1171038 1172153 . - . ID=gene:Rv1048c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1048c;logic_name=ena +Chromosome ena gene 1171038 1172153 . - . ID=gene:Rv1048c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1048c;logic_name=ena Chromosome ena mRNA 1171038 1172153 . - . ID=transcript:Rv1048c;Parent=gene:Rv1048c;biotype=protein_coding;transcript_id=Rv1048c Chromosome ena exon 1171038 1172153 . - . Parent=transcript:Rv1048c;Name=Rv1048c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1048c-1;rank=1 Chromosome ena CDS 1171038 1172153 . - 0 ID=CDS:Rv1048c;Parent=transcript:Rv1048c;protein_id=Rv1048c ### -Chromosome ena gene 1172386 1172832 . + . ID=gene:Rv1049;biotype=protein_coding;description=Probable transcriptional repressor protein;gene_id=Rv1049;logic_name=ena +Chromosome ena gene 1172386 1172832 . + . ID=gene:Rv1049;biotype=protein_coding;description=Probable transcriptional repressor protein;gene_id=Rv1049;logic_name=ena Chromosome ena mRNA 1172386 1172832 . + . ID=transcript:Rv1049;Parent=gene:Rv1049;biotype=protein_coding;transcript_id=Rv1049 Chromosome ena exon 1172386 1172832 . + . Parent=transcript:Rv1049;Name=Rv1049-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1049-1;rank=1 Chromosome ena CDS 1172386 1172832 . + 0 ID=CDS:Rv1049;Parent=transcript:Rv1049;protein_id=Rv1049 ### -Chromosome ena gene 1172881 1173786 . + . ID=gene:Rv1050;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1050;logic_name=ena +Chromosome ena gene 1172881 1173786 . + . ID=gene:Rv1050;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1050;logic_name=ena Chromosome ena mRNA 1172881 1173786 . + . ID=transcript:Rv1050;Parent=gene:Rv1050;biotype=protein_coding;transcript_id=Rv1050 Chromosome ena exon 1172881 1173786 . + . Parent=transcript:Rv1050;Name=Rv1050-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1050-1;rank=1 Chromosome ena CDS 1172881 1173786 . + 0 ID=CDS:Rv1050;Parent=transcript:Rv1050;protein_id=Rv1050 ### -Chromosome ena gene 1173945 1174700 . - . ID=gene:Rv1051c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1051c;logic_name=ena +Chromosome ena gene 1173945 1174700 . - . ID=gene:Rv1051c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1051c;logic_name=ena Chromosome ena mRNA 1173945 1174700 . - . ID=transcript:Rv1051c;Parent=gene:Rv1051c;biotype=protein_coding;transcript_id=Rv1051c Chromosome ena exon 1173945 1174700 . - . Parent=transcript:Rv1051c;Name=Rv1051c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1051c-1;rank=1 Chromosome ena CDS 1173945 1174700 . - 0 ID=CDS:Rv1051c;Parent=transcript:Rv1051c;protein_id=Rv1051c @@ -5521,22 +5521,22 @@ Chromosome ena transcript 1175225 1175315 . + . ID=transcript:EBG00000313344;Par Chromosome ena exon 1175225 1175315 . + . Parent=transcript:EBG00000313344;Name=EBG00000313344;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313344;rank=1 ### Chromosome ena_gene biological_region 1175225 1175315 . + . external_name=AL123456.3:gene:1175225..1175315;logic_name=ena_gene -Chromosome ena gene 1175723 1176112 . + . ID=gene:Rv1052;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1052;logic_name=ena +Chromosome ena gene 1175723 1176112 . + . ID=gene:Rv1052;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1052;logic_name=ena Chromosome ena mRNA 1175723 1176112 . + . ID=transcript:Rv1052;Parent=gene:Rv1052;biotype=protein_coding;transcript_id=Rv1052 Chromosome ena exon 1175723 1176112 . + . Parent=transcript:Rv1052;Name=Rv1052-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1052-1;rank=1 Chromosome ena CDS 1175723 1176112 . + 0 ID=CDS:Rv1052;Parent=transcript:Rv1052;protein_id=Rv1052 ### -Chromosome ena gene 1176011 1176286 . - . ID=gene:Rv1053c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1053c;logic_name=ena +Chromosome ena gene 1176011 1176286 . - . ID=gene:Rv1053c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1053c;logic_name=ena Chromosome ena mRNA 1176011 1176286 . - . ID=transcript:Rv1053c;Parent=gene:Rv1053c;biotype=protein_coding;transcript_id=Rv1053c Chromosome ena exon 1176011 1176286 . - . Parent=transcript:Rv1053c;Name=Rv1053c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1053c-1;rank=1 Chromosome ena CDS 1176011 1176286 . - 0 ID=CDS:Rv1053c;Parent=transcript:Rv1053c;protein_id=Rv1053c ### -Chromosome ena gene 1176928 1177242 . + . ID=gene:Rv1054;biotype=protein_coding;description=Probable integrase (fragment);gene_id=Rv1054;logic_name=ena +Chromosome ena gene 1176928 1177242 . + . ID=gene:Rv1054;biotype=protein_coding;description=Probable integrase (fragment);gene_id=Rv1054;logic_name=ena Chromosome ena mRNA 1176928 1177242 . + . ID=transcript:Rv1054;Parent=gene:Rv1054;biotype=protein_coding;transcript_id=Rv1054 Chromosome ena exon 1176928 1177242 . + . Parent=transcript:Rv1054;Name=Rv1054-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1054-1;rank=1 Chromosome ena CDS 1176928 1177242 . + 0 ID=CDS:Rv1054;Parent=transcript:Rv1054;protein_id=Rv1054 ### -Chromosome ena gene 1177239 1177373 . + . ID=gene:Rv1055;biotype=protein_coding;description=Possible integrase (fragment);gene_id=Rv1055;logic_name=ena +Chromosome ena gene 1177239 1177373 . + . ID=gene:Rv1055;biotype=protein_coding;description=Possible integrase (fragment);gene_id=Rv1055;logic_name=ena Chromosome ena mRNA 1177239 1177373 . + . ID=transcript:Rv1055;Parent=gene:Rv1055;biotype=protein_coding;transcript_id=Rv1055 Chromosome ena exon 1177239 1177373 . + . Parent=transcript:Rv1055;Name=Rv1055-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1055-1;rank=1 Chromosome ena CDS 1177239 1177373 . + 0 ID=CDS:Rv1055;Parent=transcript:Rv1055;protein_id=Rv1055 @@ -5546,197 +5546,197 @@ Chromosome ena transcript 1177396 1177469 . + . ID=transcript:EBG00000313331;Par Chromosome ena exon 1177396 1177469 . + . Parent=transcript:EBG00000313331;Name=EBG00000313331;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313331;rank=1 ### Chromosome ena_gene biological_region 1177396 1177469 . + . external_name=AL123456.3:gene:1177396..1177469;logic_name=ena_gene -Chromosome ena gene 1177628 1178392 . + . ID=gene:Rv1056;biotype=protein_coding;description=Conserved protein;gene_id=Rv1056;logic_name=ena +Chromosome ena gene 1177628 1178392 . + . ID=gene:Rv1056;biotype=protein_coding;description=Conserved protein;gene_id=Rv1056;logic_name=ena Chromosome ena mRNA 1177628 1178392 . + . ID=transcript:Rv1056;Parent=gene:Rv1056;biotype=protein_coding;transcript_id=Rv1056 Chromosome ena exon 1177628 1178392 . + . Parent=transcript:Rv1056;Name=Rv1056-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1056-1;rank=1 Chromosome ena CDS 1177628 1178392 . + 0 ID=CDS:Rv1056;Parent=transcript:Rv1056;protein_id=Rv1056 ### -Chromosome ena gene 1179396 1180577 . + . ID=gene:Rv1057;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1057;logic_name=ena +Chromosome ena gene 1179396 1180577 . + . ID=gene:Rv1057;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1057;logic_name=ena Chromosome ena mRNA 1179396 1180577 . + . ID=transcript:Rv1057;Parent=gene:Rv1057;biotype=protein_coding;transcript_id=Rv1057 Chromosome ena exon 1179396 1180577 . + . Parent=transcript:Rv1057;Name=Rv1057-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1057-1;rank=1 Chromosome ena CDS 1179396 1180577 . + 0 ID=CDS:Rv1057;Parent=transcript:Rv1057;protein_id=Rv1057 ### -Chromosome ena gene 1180684 1182315 . + . ID=gene:Rv1058;Name=fadD14;biotype=protein_coding;description=Probable medium chain fatty-acid-CoA ligase FadD14 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1058;logic_name=ena +Chromosome ena gene 1180684 1182315 . + . ID=gene:Rv1058;Name=fadD14;biotype=protein_coding;description=Probable medium chain fatty-acid-CoA ligase FadD14 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1058;logic_name=ena Chromosome ena mRNA 1180684 1182315 . + . ID=transcript:Rv1058;Parent=gene:Rv1058;Name=fadD14-1;biotype=protein_coding;transcript_id=Rv1058 Chromosome ena exon 1180684 1182315 . + . Parent=transcript:Rv1058;Name=Rv1058-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1058-1;rank=1 Chromosome ena CDS 1180684 1182315 . + 0 ID=CDS:Rv1058;Parent=transcript:Rv1058;protein_id=Rv1058 ### -Chromosome ena gene 1182391 1183455 . + . ID=gene:Rv1059;biotype=protein_coding;description=Conserved protein;gene_id=Rv1059;logic_name=ena +Chromosome ena gene 1182391 1183455 . + . ID=gene:Rv1059;biotype=protein_coding;description=Conserved protein;gene_id=Rv1059;logic_name=ena Chromosome ena mRNA 1182391 1183455 . + . ID=transcript:Rv1059;Parent=gene:Rv1059;biotype=protein_coding;transcript_id=Rv1059 Chromosome ena exon 1182391 1183455 . + . Parent=transcript:Rv1059;Name=Rv1059-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1059-1;rank=1 Chromosome ena CDS 1182391 1183455 . + 0 ID=CDS:Rv1059;Parent=transcript:Rv1059;protein_id=Rv1059 ### -Chromosome ena gene 1183508 1183981 . + . ID=gene:Rv1060;biotype=protein_coding;description=Unknown protein;gene_id=Rv1060;logic_name=ena +Chromosome ena gene 1183508 1183981 . + . ID=gene:Rv1060;biotype=protein_coding;description=Unknown protein;gene_id=Rv1060;logic_name=ena Chromosome ena mRNA 1183508 1183981 . + . ID=transcript:Rv1060;Parent=gene:Rv1060;biotype=protein_coding;transcript_id=Rv1060 Chromosome ena exon 1183508 1183981 . + . Parent=transcript:Rv1060;Name=Rv1060-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1060-1;rank=1 Chromosome ena CDS 1183508 1183981 . + 0 ID=CDS:Rv1060;Parent=transcript:Rv1060;protein_id=Rv1060 ### -Chromosome ena gene 1184015 1184878 . + . ID=gene:Rv1061;biotype=protein_coding;description=Conserved protein;gene_id=Rv1061;logic_name=ena +Chromosome ena gene 1184015 1184878 . + . ID=gene:Rv1061;biotype=protein_coding;description=Conserved protein;gene_id=Rv1061;logic_name=ena Chromosome ena mRNA 1184015 1184878 . + . ID=transcript:Rv1061;Parent=gene:Rv1061;biotype=protein_coding;transcript_id=Rv1061 Chromosome ena exon 1184015 1184878 . + . Parent=transcript:Rv1061;Name=Rv1061-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1061-1;rank=1 Chromosome ena CDS 1184015 1184878 . + 0 ID=CDS:Rv1061;Parent=transcript:Rv1061;protein_id=Rv1061 ### -Chromosome ena gene 1184883 1185740 . + . ID=gene:Rv1062;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1062;logic_name=ena +Chromosome ena gene 1184883 1185740 . + . ID=gene:Rv1062;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1062;logic_name=ena Chromosome ena mRNA 1184883 1185740 . + . ID=transcript:Rv1062;Parent=gene:Rv1062;biotype=protein_coding;transcript_id=Rv1062 Chromosome ena exon 1184883 1185740 . + . Parent=transcript:Rv1062;Name=Rv1062-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1062-1;rank=1 Chromosome ena CDS 1184883 1185740 . + 0 ID=CDS:Rv1062;Parent=transcript:Rv1062;protein_id=Rv1062 ### -Chromosome ena gene 1185741 1186823 . - . ID=gene:Rv1063c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1063c;logic_name=ena +Chromosome ena gene 1185741 1186823 . - . ID=gene:Rv1063c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1063c;logic_name=ena Chromosome ena mRNA 1185741 1186823 . - . ID=transcript:Rv1063c;Parent=gene:Rv1063c;biotype=protein_coding;transcript_id=Rv1063c Chromosome ena exon 1185741 1186823 . - . Parent=transcript:Rv1063c;Name=Rv1063c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1063c-1;rank=1 Chromosome ena CDS 1185741 1186823 . - 0 ID=CDS:Rv1063c;Parent=transcript:Rv1063c;protein_id=Rv1063c ### -Chromosome ena gene 1186904 1187323 . - . ID=gene:Rv1064c;Name=lpqV;biotype=protein_coding;description=Possible lipoprotein LpqV;gene_id=Rv1064c;logic_name=ena +Chromosome ena gene 1186904 1187323 . - . ID=gene:Rv1064c;Name=lpqV;biotype=protein_coding;description=Possible lipoprotein LpqV;gene_id=Rv1064c;logic_name=ena Chromosome ena mRNA 1186904 1187323 . - . ID=transcript:Rv1064c;Parent=gene:Rv1064c;Name=lpqV-1;biotype=protein_coding;transcript_id=Rv1064c Chromosome ena exon 1186904 1187323 . - . Parent=transcript:Rv1064c;Name=Rv1064c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1064c-1;rank=1 Chromosome ena CDS 1186904 1187323 . - 0 ID=CDS:Rv1064c;Parent=transcript:Rv1064c;protein_id=Rv1064c ### -Chromosome ena gene 1187435 1188001 . + . ID=gene:Rv1065;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1065;logic_name=ena +Chromosome ena gene 1187435 1188001 . + . ID=gene:Rv1065;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1065;logic_name=ena Chromosome ena mRNA 1187435 1188001 . + . ID=transcript:Rv1065;Parent=gene:Rv1065;biotype=protein_coding;transcript_id=Rv1065 Chromosome ena exon 1187435 1188001 . + . Parent=transcript:Rv1065;Name=Rv1065-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1065-1;rank=1 Chromosome ena CDS 1187435 1188001 . + 0 ID=CDS:Rv1065;Parent=transcript:Rv1065;protein_id=Rv1065 ### -Chromosome ena gene 1187998 1188393 . + . ID=gene:Rv1066;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1066;logic_name=ena +Chromosome ena gene 1187998 1188393 . + . ID=gene:Rv1066;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1066;logic_name=ena Chromosome ena mRNA 1187998 1188393 . + . ID=transcript:Rv1066;Parent=gene:Rv1066;biotype=protein_coding;transcript_id=Rv1066 Chromosome ena exon 1187998 1188393 . + . Parent=transcript:Rv1066;Name=Rv1066-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1066-1;rank=1 Chromosome ena CDS 1187998 1188393 . + 0 ID=CDS:Rv1066;Parent=transcript:Rv1066;protein_id=Rv1066 ### -Chromosome ena gene 1188421 1190424 . - . ID=gene:Rv1067c;Name=PE_PGRS19;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS19;gene_id=Rv1067c;logic_name=ena +Chromosome ena gene 1188421 1190424 . - . ID=gene:Rv1067c;Name=PE_PGRS19;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS19;gene_id=Rv1067c;logic_name=ena Chromosome ena mRNA 1188421 1190424 . - . ID=transcript:Rv1067c;Parent=gene:Rv1067c;Name=PE_PGRS19-1;biotype=protein_coding;transcript_id=Rv1067c Chromosome ena exon 1188421 1190424 . - . Parent=transcript:Rv1067c;Name=Rv1067c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1067c-1;rank=1 Chromosome ena CDS 1188421 1190424 . - 0 ID=CDS:Rv1067c;Parent=transcript:Rv1067c;protein_id=Rv1067c ### -Chromosome ena gene 1190757 1192148 . - . ID=gene:Rv1068c;Name=PE_PGRS20;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS20;gene_id=Rv1068c;logic_name=ena +Chromosome ena gene 1190757 1192148 . - . ID=gene:Rv1068c;Name=PE_PGRS20;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS20;gene_id=Rv1068c;logic_name=ena Chromosome ena mRNA 1190757 1192148 . - . ID=transcript:Rv1068c;Parent=gene:Rv1068c;Name=PE_PGRS20-1;biotype=protein_coding;transcript_id=Rv1068c Chromosome ena exon 1190757 1192148 . - . Parent=transcript:Rv1068c;Name=Rv1068c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1068c-1;rank=1 Chromosome ena CDS 1190757 1192148 . - 0 ID=CDS:Rv1068c;Parent=transcript:Rv1068c;protein_id=Rv1068c ### -Chromosome ena gene 1192510 1194273 . - . ID=gene:Rv1069c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1069c;logic_name=ena +Chromosome ena gene 1192510 1194273 . - . ID=gene:Rv1069c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1069c;logic_name=ena Chromosome ena mRNA 1192510 1194273 . - . ID=transcript:Rv1069c;Parent=gene:Rv1069c;biotype=protein_coding;transcript_id=Rv1069c Chromosome ena exon 1192510 1194273 . - . Parent=transcript:Rv1069c;Name=Rv1069c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1069c-1;rank=1 Chromosome ena CDS 1192510 1194273 . - 0 ID=CDS:Rv1069c;Parent=transcript:Rv1069c;protein_id=Rv1069c ### -Chromosome ena gene 1194270 1195043 . - . ID=gene:Rv1070c;Name=echA8;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA8 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1070c;logic_name=ena +Chromosome ena gene 1194270 1195043 . - . ID=gene:Rv1070c;Name=echA8;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA8 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1070c;logic_name=ena Chromosome ena mRNA 1194270 1195043 . - . ID=transcript:Rv1070c;Parent=gene:Rv1070c;Name=echA8-1;biotype=protein_coding;transcript_id=Rv1070c Chromosome ena exon 1194270 1195043 . - . Parent=transcript:Rv1070c;Name=Rv1070c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1070c-1;rank=1 Chromosome ena CDS 1194270 1195043 . - 0 ID=CDS:Rv1070c;Parent=transcript:Rv1070c;protein_id=Rv1070c ### -Chromosome ena gene 1195055 1196092 . - . ID=gene:Rv1071c;Name=echA9;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA9 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1071c;logic_name=ena +Chromosome ena gene 1195055 1196092 . - . ID=gene:Rv1071c;Name=echA9;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA9 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1071c;logic_name=ena Chromosome ena mRNA 1195055 1196092 . - . ID=transcript:Rv1071c;Parent=gene:Rv1071c;Name=echA9-1;biotype=protein_coding;transcript_id=Rv1071c Chromosome ena exon 1195055 1196092 . - . Parent=transcript:Rv1071c;Name=Rv1071c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1071c-1;rank=1 Chromosome ena CDS 1195055 1196092 . - 0 ID=CDS:Rv1071c;Parent=transcript:Rv1071c;protein_id=Rv1071c ### -Chromosome ena gene 1196279 1197115 . + . ID=gene:Rv1072;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1072;logic_name=ena +Chromosome ena gene 1196279 1197115 . + . ID=gene:Rv1072;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1072;logic_name=ena Chromosome ena mRNA 1196279 1197115 . + . ID=transcript:Rv1072;Parent=gene:Rv1072;biotype=protein_coding;transcript_id=Rv1072 Chromosome ena exon 1196279 1197115 . + . Parent=transcript:Rv1072;Name=Rv1072-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1072-1;rank=1 Chromosome ena CDS 1196279 1197115 . + 0 ID=CDS:Rv1072;Parent=transcript:Rv1072;protein_id=Rv1072 ### -Chromosome ena gene 1197231 1198082 . + . ID=gene:Rv1073;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1073;logic_name=ena +Chromosome ena gene 1197231 1198082 . + . ID=gene:Rv1073;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1073;logic_name=ena Chromosome ena mRNA 1197231 1198082 . + . ID=transcript:Rv1073;Parent=gene:Rv1073;biotype=protein_coding;transcript_id=Rv1073 Chromosome ena exon 1197231 1198082 . + . Parent=transcript:Rv1073;Name=Rv1073-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1073-1;rank=1 Chromosome ena CDS 1197231 1198082 . + 0 ID=CDS:Rv1073;Parent=transcript:Rv1073;protein_id=Rv1073 ### -Chromosome ena gene 1198156 1199373 . - . ID=gene:Rv1074c;Name=fadA3;biotype=protein_coding;description=Probable beta-ketoacyl CoA thiolase FadA3;gene_id=Rv1074c;logic_name=ena +Chromosome ena gene 1198156 1199373 . - . ID=gene:Rv1074c;Name=fadA3;biotype=protein_coding;description=Probable beta-ketoacyl CoA thiolase FadA3;gene_id=Rv1074c;logic_name=ena Chromosome ena mRNA 1198156 1199373 . - . ID=transcript:Rv1074c;Parent=gene:Rv1074c;Name=fadA3-1;biotype=protein_coding;transcript_id=Rv1074c Chromosome ena exon 1198156 1199373 . - . Parent=transcript:Rv1074c;Name=Rv1074c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1074c-1;rank=1 Chromosome ena CDS 1198156 1199373 . - 0 ID=CDS:Rv1074c;Parent=transcript:Rv1074c;protein_id=Rv1074c ### -Chromosome ena gene 1199426 1200370 . - . ID=gene:Rv1075c;biotype=protein_coding;description=Conserved exported protein;gene_id=Rv1075c;logic_name=ena +Chromosome ena gene 1199426 1200370 . - . ID=gene:Rv1075c;biotype=protein_coding;description=Conserved exported protein;gene_id=Rv1075c;logic_name=ena Chromosome ena mRNA 1199426 1200370 . - . ID=transcript:Rv1075c;Parent=gene:Rv1075c;biotype=protein_coding;transcript_id=Rv1075c Chromosome ena exon 1199426 1200370 . - . Parent=transcript:Rv1075c;Name=Rv1075c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1075c-1;rank=1 Chromosome ena CDS 1199426 1200370 . - 0 ID=CDS:Rv1075c;Parent=transcript:Rv1075c;protein_id=Rv1075c ### -Chromosome ena gene 1200767 1201660 . + . ID=gene:Rv1076;Name=lipU;biotype=protein_coding;description=Possible lipase LipU;gene_id=Rv1076;logic_name=ena +Chromosome ena gene 1200767 1201660 . + . ID=gene:Rv1076;Name=lipU;biotype=protein_coding;description=Possible lipase LipU;gene_id=Rv1076;logic_name=ena Chromosome ena mRNA 1200767 1201660 . + . ID=transcript:Rv1076;Parent=gene:Rv1076;Name=lipU-1;biotype=protein_coding;transcript_id=Rv1076 Chromosome ena exon 1200767 1201660 . + . Parent=transcript:Rv1076;Name=Rv1076-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1076-1;rank=1 Chromosome ena CDS 1200767 1201660 . + 0 ID=CDS:Rv1076;Parent=transcript:Rv1076;protein_id=Rv1076 ### -Chromosome ena gene 1201717 1203111 . + . ID=gene:Rv1077;Name=cbs;biotype=protein_coding;description=Probable cystathionine beta-synthase Cbs (serine sulfhydrase) (beta-thionase) (hemoprotein H-450);gene_id=Rv1077;logic_name=ena +Chromosome ena gene 1201717 1203111 . + . ID=gene:Rv1077;Name=cbs;biotype=protein_coding;description=Probable cystathionine beta-synthase Cbs (serine sulfhydrase) (beta-thionase) (hemoprotein H-450);gene_id=Rv1077;logic_name=ena Chromosome ena mRNA 1201717 1203111 . + . ID=transcript:Rv1077;Parent=gene:Rv1077;Name=cbs-1;biotype=protein_coding;transcript_id=Rv1077 Chromosome ena exon 1201717 1203111 . + . Parent=transcript:Rv1077;Name=Rv1077-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1077-1;rank=1 Chromosome ena CDS 1201717 1203111 . + 0 ID=CDS:Rv1077;Parent=transcript:Rv1077;protein_id=Rv1077 ### -Chromosome ena gene 1203313 1204035 . + . ID=gene:Rv1078;Name=pra;biotype=protein_coding;description=Probable proline-rich antigen homolog Pra;gene_id=Rv1078;logic_name=ena +Chromosome ena gene 1203313 1204035 . + . ID=gene:Rv1078;Name=pra;biotype=protein_coding;description=Probable proline-rich antigen homolog Pra;gene_id=Rv1078;logic_name=ena Chromosome ena mRNA 1203313 1204035 . + . ID=transcript:Rv1078;Parent=gene:Rv1078;Name=pra-1;biotype=protein_coding;transcript_id=Rv1078 Chromosome ena exon 1203313 1204035 . + . Parent=transcript:Rv1078;Name=Rv1078-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1078-1;rank=1 Chromosome ena CDS 1203313 1204035 . + 0 ID=CDS:Rv1078;Parent=transcript:Rv1078;protein_id=Rv1078 ### -Chromosome ena gene 1204067 1205233 . + . ID=gene:Rv1079;Name=metB;biotype=protein_coding;description=Cystathionine gamma-synthase MetB (CGS) (O-succinylhomoserine [thiol]-lyase);gene_id=Rv1079;logic_name=ena +Chromosome ena gene 1204067 1205233 . + . ID=gene:Rv1079;Name=metB;biotype=protein_coding;description=Cystathionine gamma-synthase MetB (CGS) (O-succinylhomoserine [thiol]-lyase);gene_id=Rv1079;logic_name=ena Chromosome ena mRNA 1204067 1205233 . + . ID=transcript:Rv1079;Parent=gene:Rv1079;Name=metB-1;biotype=protein_coding;transcript_id=Rv1079 Chromosome ena exon 1204067 1205233 . + . Parent=transcript:Rv1079;Name=Rv1079-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1079-1;rank=1 Chromosome ena CDS 1204067 1205233 . + 0 ID=CDS:Rv1079;Parent=transcript:Rv1079;protein_id=Rv1079 ### -Chromosome ena gene 1205304 1205798 . - . ID=gene:Rv1080c;Name=greA;biotype=protein_coding;description=Probable transcription elongation factor GreA (transcript cleavage factor GreA);gene_id=Rv1080c;logic_name=ena +Chromosome ena gene 1205304 1205798 . - . ID=gene:Rv1080c;Name=greA;biotype=protein_coding;description=Probable transcription elongation factor GreA (transcript cleavage factor GreA);gene_id=Rv1080c;logic_name=ena Chromosome ena mRNA 1205304 1205798 . - . ID=transcript:Rv1080c;Parent=gene:Rv1080c;Name=greA-1;biotype=protein_coding;transcript_id=Rv1080c Chromosome ena exon 1205304 1205798 . - . Parent=transcript:Rv1080c;Name=Rv1080c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1080c-1;rank=1 Chromosome ena CDS 1205304 1205798 . - 0 ID=CDS:Rv1080c;Parent=transcript:Rv1080c;protein_id=Rv1080c ### -Chromosome ena gene 1205984 1206418 . - . ID=gene:Rv1081c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1081c;logic_name=ena +Chromosome ena gene 1205984 1206418 . - . ID=gene:Rv1081c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1081c;logic_name=ena Chromosome ena mRNA 1205984 1206418 . - . ID=transcript:Rv1081c;Parent=gene:Rv1081c;biotype=protein_coding;transcript_id=Rv1081c Chromosome ena exon 1205984 1206418 . - . Parent=transcript:Rv1081c;Name=Rv1081c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1081c-1;rank=1 Chromosome ena CDS 1205984 1206418 . - 0 ID=CDS:Rv1081c;Parent=transcript:Rv1081c;protein_id=Rv1081c ### -Chromosome ena gene 1206520 1207386 . + . ID=gene:Rv1082;Name=mca;biotype=protein_coding;description=Mycothiol conjugate amidase Mca (mycothiol S-conjugate amidase);gene_id=Rv1082;logic_name=ena +Chromosome ena gene 1206520 1207386 . + . ID=gene:Rv1082;Name=mca;biotype=protein_coding;description=Mycothiol conjugate amidase Mca (mycothiol S-conjugate amidase);gene_id=Rv1082;logic_name=ena Chromosome ena mRNA 1206520 1207386 . + . ID=transcript:Rv1082;Parent=gene:Rv1082;Name=mca-1;biotype=protein_coding;transcript_id=Rv1082 Chromosome ena exon 1206520 1207386 . + . Parent=transcript:Rv1082;Name=Rv1082-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1082-1;rank=1 Chromosome ena CDS 1206520 1207386 . + 0 ID=CDS:Rv1082;Parent=transcript:Rv1082;protein_id=Rv1082 ### -Chromosome ena gene 1207383 1207649 . + . ID=gene:Rv1083;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1083;logic_name=ena +Chromosome ena gene 1207383 1207649 . + . ID=gene:Rv1083;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1083;logic_name=ena Chromosome ena mRNA 1207383 1207649 . + . ID=transcript:Rv1083;Parent=gene:Rv1083;biotype=protein_coding;transcript_id=Rv1083 Chromosome ena exon 1207383 1207649 . + . Parent=transcript:Rv1083;Name=Rv1083-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1083-1;rank=1 Chromosome ena CDS 1207383 1207649 . + 0 ID=CDS:Rv1083;Parent=transcript:Rv1083;protein_id=Rv1083 ### -Chromosome ena gene 1207636 1209657 . + . ID=gene:Rv1084;biotype=protein_coding;description=Conserved protein;gene_id=Rv1084;logic_name=ena +Chromosome ena gene 1207636 1209657 . + . ID=gene:Rv1084;biotype=protein_coding;description=Conserved protein;gene_id=Rv1084;logic_name=ena Chromosome ena mRNA 1207636 1209657 . + . ID=transcript:Rv1084;Parent=gene:Rv1084;biotype=protein_coding;transcript_id=Rv1084 Chromosome ena exon 1207636 1209657 . + . Parent=transcript:Rv1084;Name=Rv1084-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1084-1;rank=1 Chromosome ena CDS 1207636 1209657 . + 0 ID=CDS:Rv1084;Parent=transcript:Rv1084;protein_id=Rv1084 ### -Chromosome ena gene 1209756 1210484 . - . ID=gene:Rv1085c;biotype=protein_coding;description=Possible hemolysin-like protein;gene_id=Rv1085c;logic_name=ena +Chromosome ena gene 1209756 1210484 . - . ID=gene:Rv1085c;biotype=protein_coding;description=Possible hemolysin-like protein;gene_id=Rv1085c;logic_name=ena Chromosome ena mRNA 1209756 1210484 . - . ID=transcript:Rv1085c;Parent=gene:Rv1085c;biotype=protein_coding;transcript_id=Rv1085c Chromosome ena exon 1209756 1210484 . - . Parent=transcript:Rv1085c;Name=Rv1085c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1085c-1;rank=1 Chromosome ena CDS 1209756 1210484 . - 0 ID=CDS:Rv1085c;Parent=transcript:Rv1085c;protein_id=Rv1085c ### -Chromosome ena gene 1210595 1211383 . + . ID=gene:Rv1086;biotype=protein_coding;description=Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase) (Z-farnesyl diphosphate synthase) (Z-FPP synthetase) (Z-farnesyl diphosphate synthetase) (geranyltranstransferase) (farnesyl pyrophosphate synthetase);gene_id=Rv1086;logic_name=ena +Chromosome ena gene 1210595 1211383 . + . ID=gene:Rv1086;biotype=protein_coding;description=Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase) (Z-farnesyl diphosphate synthase) (Z-FPP synthetase) (Z-farnesyl diphosphate synthetase) (geranyltranstransferase) (farnesyl pyrophosphate synthetase);gene_id=Rv1086;logic_name=ena Chromosome ena mRNA 1210595 1211383 . + . ID=transcript:Rv1086;Parent=gene:Rv1086;biotype=protein_coding;transcript_id=Rv1086 Chromosome ena exon 1210595 1211383 . + . Parent=transcript:Rv1086;Name=Rv1086-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1086-1;rank=1 Chromosome ena CDS 1210595 1211383 . + 0 ID=CDS:Rv1086;Parent=transcript:Rv1086;protein_id=Rv1086 ### -Chromosome ena gene 1211560 1213863 . + . ID=gene:Rv1087;Name=PE_PGRS21;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS21;gene_id=Rv1087;logic_name=ena +Chromosome ena gene 1211560 1213863 . + . ID=gene:Rv1087;Name=PE_PGRS21;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS21;gene_id=Rv1087;logic_name=ena Chromosome ena mRNA 1211560 1213863 . + . ID=transcript:Rv1087;Parent=gene:Rv1087;Name=PE_PGRS21-1;biotype=protein_coding;transcript_id=Rv1087 Chromosome ena exon 1211560 1213863 . + . Parent=transcript:Rv1087;Name=Rv1087-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1087-1;rank=1 Chromosome ena CDS 1211560 1213863 . + 0 ID=CDS:Rv1087;Parent=transcript:Rv1087;protein_id=Rv1087 ### -Chromosome ena gene 1214040 1214360 . + . ID=gene:Rv1087A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1087A;logic_name=ena +Chromosome ena gene 1214040 1214360 . + . ID=gene:Rv1087A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1087A;logic_name=ena Chromosome ena mRNA 1214040 1214360 . + . ID=transcript:Rv1087A;Parent=gene:Rv1087A;biotype=protein_coding;transcript_id=Rv1087A Chromosome ena exon 1214040 1214360 . + . Parent=transcript:Rv1087A;Name=Rv1087A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1087A-1;rank=1 Chromosome ena CDS 1214040 1214360 . + 0 ID=CDS:Rv1087A;Parent=transcript:Rv1087A;protein_id=Rv1087A ### -Chromosome ena gene 1214513 1214947 . + . ID=gene:Rv1088;Name=PE9;biotype=protein_coding;description=PE family protein PE9;gene_id=Rv1088;logic_name=ena +Chromosome ena gene 1214513 1214947 . + . ID=gene:Rv1088;Name=PE9;biotype=protein_coding;description=PE family protein PE9;gene_id=Rv1088;logic_name=ena Chromosome ena mRNA 1214513 1214947 . + . ID=transcript:Rv1088;Parent=gene:Rv1088;Name=PE9-1;biotype=protein_coding;transcript_id=Rv1088 Chromosome ena exon 1214513 1214947 . + . Parent=transcript:Rv1088;Name=Rv1088-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1088-1;rank=1 Chromosome ena CDS 1214513 1214947 . + 0 ID=CDS:Rv1088;Parent=transcript:Rv1088;protein_id=Rv1088 ### -Chromosome ena gene 1214769 1215131 . + . ID=gene:Rv1089;Name=PE10;biotype=protein_coding;description=PE family protein PE10;gene_id=Rv1089;logic_name=ena +Chromosome ena gene 1214769 1215131 . + . ID=gene:Rv1089;Name=PE10;biotype=protein_coding;description=PE family protein PE10;gene_id=Rv1089;logic_name=ena Chromosome ena mRNA 1214769 1215131 . + . ID=transcript:Rv1089;Parent=gene:Rv1089;Name=PE10-1;biotype=protein_coding;transcript_id=Rv1089 Chromosome ena exon 1214769 1215131 . + . Parent=transcript:Rv1089;Name=Rv1089-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1089-1;rank=1 Chromosome ena CDS 1214769 1215131 . + 0 ID=CDS:Rv1089;Parent=transcript:Rv1089;protein_id=Rv1089 ### -Chromosome ena gene 1215517 1215621 . + . ID=gene:Rv1089A;Name=celA2a;biotype=protein_coding;description=Probable cellulase CelA2a (endo-1%2C4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase);gene_id=Rv1089A;logic_name=ena +Chromosome ena gene 1215517 1215621 . + . ID=gene:Rv1089A;Name=celA2a;biotype=protein_coding;description=Probable cellulase CelA2a (endo-1%2C4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase);gene_id=Rv1089A;logic_name=ena Chromosome ena mRNA 1215517 1215621 . + . ID=transcript:Rv1089A;Parent=gene:Rv1089A;Name=celA2a-1;biotype=protein_coding;transcript_id=Rv1089A Chromosome ena exon 1215517 1215621 . + . Parent=transcript:Rv1089A;Name=Rv1089A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1089A-1;rank=1 Chromosome ena CDS 1215517 1215621 . + 0 ID=CDS:Rv1089A;Parent=transcript:Rv1089A;protein_id=Rv1089A ### -Chromosome ena gene 1215599 1216054 . + . ID=gene:Rv1090;Name=celA2b;biotype=protein_coding;description=Probable cellulase CelA2b (endo-1%2C4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase);gene_id=Rv1090;logic_name=ena +Chromosome ena gene 1215599 1216054 . + . ID=gene:Rv1090;Name=celA2b;biotype=protein_coding;description=Probable cellulase CelA2b (endo-1%2C4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase);gene_id=Rv1090;logic_name=ena Chromosome ena mRNA 1215599 1216054 . + . ID=transcript:Rv1090;Parent=gene:Rv1090;Name=celA2b-1;biotype=protein_coding;transcript_id=Rv1090 Chromosome ena exon 1215599 1216054 . + . Parent=transcript:Rv1090;Name=Rv1090-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1090-1;rank=1 Chromosome ena CDS 1215599 1216054 . + 0 ID=CDS:Rv1090;Parent=transcript:Rv1090;protein_id=Rv1090 ### -Chromosome ena gene 1216469 1219030 . + . ID=gene:Rv1091;Name=PE_PGRS22;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS22;gene_id=Rv1091;logic_name=ena +Chromosome ena gene 1216469 1219030 . + . ID=gene:Rv1091;Name=PE_PGRS22;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS22;gene_id=Rv1091;logic_name=ena Chromosome ena mRNA 1216469 1219030 . + . ID=transcript:Rv1091;Parent=gene:Rv1091;Name=PE_PGRS22-1;biotype=protein_coding;transcript_id=Rv1091 Chromosome ena exon 1216469 1219030 . + . Parent=transcript:Rv1091;Name=Rv1091-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1091-1;rank=1 Chromosome ena CDS 1216469 1219030 . + 0 ID=CDS:Rv1091;Parent=transcript:Rv1091;protein_id=Rv1091 ### -Chromosome ena gene 1219248 1220186 . - . ID=gene:Rv1092c;Name=coaA;biotype=protein_coding;description=Probable pantothenate kinase CoaA (pantothenic acid kinase);gene_id=Rv1092c;logic_name=ena +Chromosome ena gene 1219248 1220186 . - . ID=gene:Rv1092c;Name=coaA;biotype=protein_coding;description=Probable pantothenate kinase CoaA (pantothenic acid kinase);gene_id=Rv1092c;logic_name=ena Chromosome ena mRNA 1219248 1220186 . - . ID=transcript:Rv1092c;Parent=gene:Rv1092c;Name=coaA-1;biotype=protein_coding;transcript_id=Rv1092c Chromosome ena exon 1219248 1220186 . - . Parent=transcript:Rv1092c;Name=Rv1092c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1092c-1;rank=1 Chromosome ena CDS 1219248 1220186 . - 0 ID=CDS:Rv1092c;Parent=transcript:Rv1092c;protein_id=Rv1092c @@ -5746,337 +5746,337 @@ Chromosome ena transcript 1220388 1220487 . - . ID=transcript:EBG00000313338;Par Chromosome ena exon 1220388 1220487 . - . Parent=transcript:EBG00000313338;Name=EBG00000313338;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313338;rank=1 ### Chromosome ena_gene biological_region 1220388 1220487 . - . external_name=AL123456.3:gene:complement(1220388..1220487);logic_name=ena_gene -Chromosome ena gene 1220574 1221854 . + . ID=gene:Rv1093;Name=glyA1;biotype=protein_coding;description=Serine hydroxymethyltransferase 1 GlyA1;gene_id=Rv1093;logic_name=ena +Chromosome ena gene 1220574 1221854 . + . ID=gene:Rv1093;Name=glyA1;biotype=protein_coding;description=Serine hydroxymethyltransferase 1 GlyA1;gene_id=Rv1093;logic_name=ena Chromosome ena mRNA 1220574 1221854 . + . ID=transcript:Rv1093;Parent=gene:Rv1093;Name=glyA1-1;biotype=protein_coding;transcript_id=Rv1093 Chromosome ena exon 1220574 1221854 . + . Parent=transcript:Rv1093;Name=Rv1093-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1093-1;rank=1 Chromosome ena CDS 1220574 1221854 . + 0 ID=CDS:Rv1093;Parent=transcript:Rv1093;protein_id=Rv1093 ### -Chromosome ena gene 1221959 1222786 . + . ID=gene:Rv1094;Name=desA2;biotype=protein_coding;description=Possible acyl-[acyl-carrier protein] desaturase DesA2 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase);gene_id=Rv1094;logic_name=ena +Chromosome ena gene 1221959 1222786 . + . ID=gene:Rv1094;Name=desA2;biotype=protein_coding;description=Possible acyl-[acyl-carrier protein] desaturase DesA2 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase);gene_id=Rv1094;logic_name=ena Chromosome ena mRNA 1221959 1222786 . + . ID=transcript:Rv1094;Parent=gene:Rv1094;Name=desA2-1;biotype=protein_coding;transcript_id=Rv1094 Chromosome ena exon 1221959 1222786 . + . Parent=transcript:Rv1094;Name=Rv1094-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1094-1;rank=1 Chromosome ena CDS 1221959 1222786 . + 0 ID=CDS:Rv1094;Parent=transcript:Rv1094;protein_id=Rv1094 ### -Chromosome ena gene 1222997 1224298 . + . ID=gene:Rv1095;Name=phoH2;biotype=protein_coding;description=Probable PHOH-like protein PhoH2 (phosphate starvation-inducible protein PSIH);gene_id=Rv1095;logic_name=ena +Chromosome ena gene 1222997 1224298 . + . ID=gene:Rv1095;Name=phoH2;biotype=protein_coding;description=Probable PHOH-like protein PhoH2 (phosphate starvation-inducible protein PSIH);gene_id=Rv1095;logic_name=ena Chromosome ena mRNA 1222997 1224298 . + . ID=transcript:Rv1095;Parent=gene:Rv1095;Name=phoH2-1;biotype=protein_coding;transcript_id=Rv1095 Chromosome ena exon 1222997 1224298 . + . Parent=transcript:Rv1095;Name=Rv1095-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1095-1;rank=1 Chromosome ena CDS 1222997 1224298 . + 0 ID=CDS:Rv1095;Parent=transcript:Rv1095;protein_id=Rv1095 ### -Chromosome ena gene 1224385 1225260 . + . ID=gene:Rv1096;biotype=protein_coding;description=Possible glycosyl hydrolase;gene_id=Rv1096;logic_name=ena +Chromosome ena gene 1224385 1225260 . + . ID=gene:Rv1096;biotype=protein_coding;description=Possible glycosyl hydrolase;gene_id=Rv1096;logic_name=ena Chromosome ena mRNA 1224385 1225260 . + . ID=transcript:Rv1096;Parent=gene:Rv1096;biotype=protein_coding;transcript_id=Rv1096 Chromosome ena exon 1224385 1225260 . + . Parent=transcript:Rv1096;Name=Rv1096-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1096-1;rank=1 Chromosome ena CDS 1224385 1225260 . + 0 ID=CDS:Rv1096;Parent=transcript:Rv1096;protein_id=Rv1096 ### -Chromosome ena gene 1225263 1226144 . - . ID=gene:Rv1097c;biotype=protein_coding;description=Probable membrane glycine and proline rich protein;gene_id=Rv1097c;logic_name=ena +Chromosome ena gene 1225263 1226144 . - . ID=gene:Rv1097c;biotype=protein_coding;description=Probable membrane glycine and proline rich protein;gene_id=Rv1097c;logic_name=ena Chromosome ena mRNA 1225263 1226144 . - . ID=transcript:Rv1097c;Parent=gene:Rv1097c;biotype=protein_coding;transcript_id=Rv1097c Chromosome ena exon 1225263 1226144 . - . Parent=transcript:Rv1097c;Name=Rv1097c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1097c-1;rank=1 Chromosome ena CDS 1225263 1226144 . - 0 ID=CDS:Rv1097c;Parent=transcript:Rv1097c;protein_id=Rv1097c ### -Chromosome ena gene 1226141 1227565 . - . ID=gene:Rv1098c;Name=fum;biotype=protein_coding;description=Probable fumarase Fum (fumarate hydratase);gene_id=Rv1098c;logic_name=ena +Chromosome ena gene 1226141 1227565 . - . ID=gene:Rv1098c;Name=fum;biotype=protein_coding;description=Probable fumarase Fum (fumarate hydratase);gene_id=Rv1098c;logic_name=ena Chromosome ena mRNA 1226141 1227565 . - . ID=transcript:Rv1098c;Parent=gene:Rv1098c;Name=fum-1;biotype=protein_coding;transcript_id=Rv1098c Chromosome ena exon 1226141 1227565 . - . Parent=transcript:Rv1098c;Name=Rv1098c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1098c-1;rank=1 Chromosome ena CDS 1226141 1227565 . - 0 ID=CDS:Rv1098c;Parent=transcript:Rv1098c;protein_id=Rv1098c ### -Chromosome ena gene 1227596 1228684 . - . ID=gene:Rv1099c;Name=glpX;biotype=protein_coding;description=Fructose 1%2C6-bisphosphatase GlpX;gene_id=Rv1099c;logic_name=ena +Chromosome ena gene 1227596 1228684 . - . ID=gene:Rv1099c;Name=glpX;biotype=protein_coding;description=Fructose 1%2C6-bisphosphatase GlpX;gene_id=Rv1099c;logic_name=ena Chromosome ena mRNA 1227596 1228684 . - . ID=transcript:Rv1099c;Parent=gene:Rv1099c;Name=glpX-1;biotype=protein_coding;transcript_id=Rv1099c Chromosome ena exon 1227596 1228684 . - . Parent=transcript:Rv1099c;Name=Rv1099c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1099c-1;rank=1 Chromosome ena CDS 1227596 1228684 . - 0 ID=CDS:Rv1099c;Parent=transcript:Rv1099c;protein_id=Rv1099c ### -Chromosome ena gene 1228683 1229384 . + . ID=gene:Rv1100;biotype=protein_coding;description=Conserved protein;gene_id=Rv1100;logic_name=ena +Chromosome ena gene 1228683 1229384 . + . ID=gene:Rv1100;biotype=protein_coding;description=Conserved protein;gene_id=Rv1100;logic_name=ena Chromosome ena mRNA 1228683 1229384 . + . ID=transcript:Rv1100;Parent=gene:Rv1100;biotype=protein_coding;transcript_id=Rv1100 Chromosome ena exon 1228683 1229384 . + . Parent=transcript:Rv1100;Name=Rv1100-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1100-1;rank=1 Chromosome ena CDS 1228683 1229384 . + 0 ID=CDS:Rv1100;Parent=transcript:Rv1100;protein_id=Rv1100 ### -Chromosome ena gene 1229391 1230548 . - . ID=gene:Rv1101c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1101c;logic_name=ena +Chromosome ena gene 1229391 1230548 . - . ID=gene:Rv1101c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1101c;logic_name=ena Chromosome ena mRNA 1229391 1230548 . - . ID=transcript:Rv1101c;Parent=gene:Rv1101c;biotype=protein_coding;transcript_id=Rv1101c Chromosome ena exon 1229391 1230548 . - . Parent=transcript:Rv1101c;Name=Rv1101c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1101c-1;rank=1 Chromosome ena CDS 1229391 1230548 . - 0 ID=CDS:Rv1101c;Parent=transcript:Rv1101c;protein_id=Rv1101c ### -Chromosome ena gene 1230660 1230971 . - . ID=gene:Rv1102c;Name=mazF3;biotype=protein_coding;description=Toxin MazF3;gene_id=Rv1102c;logic_name=ena +Chromosome ena gene 1230660 1230971 . - . ID=gene:Rv1102c;Name=mazF3;biotype=protein_coding;description=Toxin MazF3;gene_id=Rv1102c;logic_name=ena Chromosome ena mRNA 1230660 1230971 . - . ID=transcript:Rv1102c;Parent=gene:Rv1102c;Name=mazF3-1;biotype=protein_coding;transcript_id=Rv1102c Chromosome ena exon 1230660 1230971 . - . Parent=transcript:Rv1102c;Name=Rv1102c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1102c-1;rank=1 Chromosome ena CDS 1230660 1230971 . - 0 ID=CDS:Rv1102c;Parent=transcript:Rv1102c;protein_id=Rv1102c ### -Chromosome ena gene 1230971 1231291 . - . ID=gene:Rv1103c;Name=mazE3;biotype=protein_coding;description=Possible antitoxin MazE3;gene_id=Rv1103c;logic_name=ena +Chromosome ena gene 1230971 1231291 . - . ID=gene:Rv1103c;Name=mazE3;biotype=protein_coding;description=Possible antitoxin MazE3;gene_id=Rv1103c;logic_name=ena Chromosome ena mRNA 1230971 1231291 . - . ID=transcript:Rv1103c;Parent=gene:Rv1103c;Name=mazE3-1;biotype=protein_coding;transcript_id=Rv1103c Chromosome ena exon 1230971 1231291 . - . Parent=transcript:Rv1103c;Name=Rv1103c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1103c-1;rank=1 Chromosome ena CDS 1230971 1231291 . - 0 ID=CDS:Rv1103c;Parent=transcript:Rv1103c;protein_id=Rv1103c ### -Chromosome ena gene 1231301 1231990 . + . ID=gene:Rv1104;biotype=protein_coding;description=Possible para-nitrobenzyl esterase (fragment);gene_id=Rv1104;logic_name=ena +Chromosome ena gene 1231301 1231990 . + . ID=gene:Rv1104;biotype=protein_coding;description=Possible para-nitrobenzyl esterase (fragment);gene_id=Rv1104;logic_name=ena Chromosome ena mRNA 1231301 1231990 . + . ID=transcript:Rv1104;Parent=gene:Rv1104;biotype=protein_coding;transcript_id=Rv1104 Chromosome ena exon 1231301 1231990 . + . Parent=transcript:Rv1104;Name=Rv1104-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1104-1;rank=1 Chromosome ena CDS 1231301 1231990 . + 0 ID=CDS:Rv1104;Parent=transcript:Rv1104;protein_id=Rv1104 ### -Chromosome ena gene 1232311 1232826 . + . ID=gene:Rv1105;biotype=protein_coding;description=Possible para-nitrobenzyl esterase (fragment);gene_id=Rv1105;logic_name=ena +Chromosome ena gene 1232311 1232826 . + . ID=gene:Rv1105;biotype=protein_coding;description=Possible para-nitrobenzyl esterase (fragment);gene_id=Rv1105;logic_name=ena Chromosome ena mRNA 1232311 1232826 . + . ID=transcript:Rv1105;Parent=gene:Rv1105;biotype=protein_coding;transcript_id=Rv1105 Chromosome ena exon 1232311 1232826 . + . Parent=transcript:Rv1105;Name=Rv1105-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1105-1;rank=1 Chromosome ena CDS 1232311 1232826 . + 0 ID=CDS:Rv1105;Parent=transcript:Rv1105;protein_id=Rv1105 ### -Chromosome ena gene 1232844 1233956 . - . ID=gene:Rv1106c;biotype=protein_coding;description=3-beta-hydroxysteroid dehydrogenase;gene_id=Rv1106c;logic_name=ena +Chromosome ena gene 1232844 1233956 . - . ID=gene:Rv1106c;biotype=protein_coding;description=3-beta-hydroxysteroid dehydrogenase;gene_id=Rv1106c;logic_name=ena Chromosome ena mRNA 1232844 1233956 . - . ID=transcript:Rv1106c;Parent=gene:Rv1106c;biotype=protein_coding;transcript_id=Rv1106c Chromosome ena exon 1232844 1233956 . - . Parent=transcript:Rv1106c;Name=Rv1106c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1106c-1;rank=1 Chromosome ena CDS 1232844 1233956 . - 0 ID=CDS:Rv1106c;Parent=transcript:Rv1106c;protein_id=Rv1106c ### -Chromosome ena gene 1233966 1234223 . - . ID=gene:Rv1107c;Name=xseB;biotype=protein_coding;description=Probable exodeoxyribonuclease VII (small subunit) XseB (exonuclease VII small subunit);gene_id=Rv1107c;logic_name=ena +Chromosome ena gene 1233966 1234223 . - . ID=gene:Rv1107c;Name=xseB;biotype=protein_coding;description=Probable exodeoxyribonuclease VII (small subunit) XseB (exonuclease VII small subunit);gene_id=Rv1107c;logic_name=ena Chromosome ena mRNA 1233966 1234223 . - . ID=transcript:Rv1107c;Parent=gene:Rv1107c;Name=xseB-1;biotype=protein_coding;transcript_id=Rv1107c Chromosome ena exon 1233966 1234223 . - . Parent=transcript:Rv1107c;Name=Rv1107c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1107c-1;rank=1 Chromosome ena CDS 1233966 1234223 . - 0 ID=CDS:Rv1107c;Parent=transcript:Rv1107c;protein_id=Rv1107c ### -Chromosome ena gene 1234213 1235460 . - . ID=gene:Rv1108c;Name=xseA;biotype=protein_coding;description=Probable exodeoxyribonuclease VII (large subunit) XseA (exonuclease VII large subunit);gene_id=Rv1108c;logic_name=ena +Chromosome ena gene 1234213 1235460 . - . ID=gene:Rv1108c;Name=xseA;biotype=protein_coding;description=Probable exodeoxyribonuclease VII (large subunit) XseA (exonuclease VII large subunit);gene_id=Rv1108c;logic_name=ena Chromosome ena mRNA 1234213 1235460 . - . ID=transcript:Rv1108c;Parent=gene:Rv1108c;Name=xseA-1;biotype=protein_coding;transcript_id=Rv1108c Chromosome ena exon 1234213 1235460 . - . Parent=transcript:Rv1108c;Name=Rv1108c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1108c-1;rank=1 Chromosome ena CDS 1234213 1235460 . - 0 ID=CDS:Rv1108c;Parent=transcript:Rv1108c;protein_id=Rv1108c ### -Chromosome ena gene 1235457 1236095 . - . ID=gene:Rv1109c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1109c;logic_name=ena +Chromosome ena gene 1235457 1236095 . - . ID=gene:Rv1109c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1109c;logic_name=ena Chromosome ena mRNA 1235457 1236095 . - . ID=transcript:Rv1109c;Parent=gene:Rv1109c;biotype=protein_coding;transcript_id=Rv1109c Chromosome ena exon 1235457 1236095 . - . Parent=transcript:Rv1109c;Name=Rv1109c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1109c-1;rank=1 Chromosome ena CDS 1235457 1236095 . - 0 ID=CDS:Rv1109c;Parent=transcript:Rv1109c;protein_id=Rv1109c ### -Chromosome ena gene 1236185 1237192 . + . ID=gene:Rv1110;Name=lytB2;biotype=protein_coding;description=Probable LYTB-related protein LytB2;gene_id=Rv1110;logic_name=ena +Chromosome ena gene 1236185 1237192 . + . ID=gene:Rv1110;Name=lytB2;biotype=protein_coding;description=Probable LYTB-related protein LytB2;gene_id=Rv1110;logic_name=ena Chromosome ena mRNA 1236185 1237192 . + . ID=transcript:Rv1110;Parent=gene:Rv1110;Name=lytB2-1;biotype=protein_coding;transcript_id=Rv1110 Chromosome ena exon 1236185 1237192 . + . Parent=transcript:Rv1110;Name=Rv1110-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1110-1;rank=1 Chromosome ena CDS 1236185 1237192 . + 0 ID=CDS:Rv1110;Parent=transcript:Rv1110;protein_id=Rv1110 ### -Chromosome ena gene 1237209 1238192 . - . ID=gene:Rv1111c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1111c;logic_name=ena +Chromosome ena gene 1237209 1238192 . - . ID=gene:Rv1111c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1111c;logic_name=ena Chromosome ena mRNA 1237209 1238192 . - . ID=transcript:Rv1111c;Parent=gene:Rv1111c;biotype=protein_coding;transcript_id=Rv1111c Chromosome ena exon 1237209 1238192 . - . Parent=transcript:Rv1111c;Name=Rv1111c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1111c-1;rank=1 Chromosome ena CDS 1237209 1238192 . - 0 ID=CDS:Rv1111c;Parent=transcript:Rv1111c;protein_id=Rv1111c ### -Chromosome ena gene 1238255 1239328 . + . ID=gene:Rv1112;biotype=protein_coding;description=Probable GTP binding protein;gene_id=Rv1112;logic_name=ena +Chromosome ena gene 1238255 1239328 . + . ID=gene:Rv1112;biotype=protein_coding;description=Probable GTP binding protein;gene_id=Rv1112;logic_name=ena Chromosome ena mRNA 1238255 1239328 . + . ID=transcript:Rv1112;Parent=gene:Rv1112;biotype=protein_coding;transcript_id=Rv1112 Chromosome ena exon 1238255 1239328 . + . Parent=transcript:Rv1112;Name=Rv1112-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1112-1;rank=1 Chromosome ena CDS 1238255 1239328 . + 0 ID=CDS:Rv1112;Parent=transcript:Rv1112;protein_id=Rv1112 ### -Chromosome ena gene 1239416 1239613 . + . ID=gene:Rv1113;Name=vapB32;biotype=protein_coding;description=Possible antitoxin VapB32;gene_id=Rv1113;logic_name=ena +Chromosome ena gene 1239416 1239613 . + . ID=gene:Rv1113;Name=vapB32;biotype=protein_coding;description=Possible antitoxin VapB32;gene_id=Rv1113;logic_name=ena Chromosome ena mRNA 1239416 1239613 . + . ID=transcript:Rv1113;Parent=gene:Rv1113;Name=vapB32-1;biotype=protein_coding;transcript_id=Rv1113 Chromosome ena exon 1239416 1239613 . + . Parent=transcript:Rv1113;Name=Rv1113-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1113-1;rank=1 Chromosome ena CDS 1239416 1239613 . + 0 ID=CDS:Rv1113;Parent=transcript:Rv1113;protein_id=Rv1113 ### -Chromosome ena gene 1239610 1239984 . + . ID=gene:Rv1114;Name=vapC32;biotype=protein_coding;description=Possible toxin VapC32. Contains PIN domain.;gene_id=Rv1114;logic_name=ena +Chromosome ena gene 1239610 1239984 . + . ID=gene:Rv1114;Name=vapC32;biotype=protein_coding;description=Possible toxin VapC32. Contains PIN domain.;gene_id=Rv1114;logic_name=ena Chromosome ena mRNA 1239610 1239984 . + . ID=transcript:Rv1114;Parent=gene:Rv1114;Name=vapC32-1;biotype=protein_coding;transcript_id=Rv1114 Chromosome ena exon 1239610 1239984 . + . Parent=transcript:Rv1114;Name=Rv1114-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1114-1;rank=1 Chromosome ena CDS 1239610 1239984 . + 0 ID=CDS:Rv1114;Parent=transcript:Rv1114;protein_id=Rv1114 ### -Chromosome ena gene 1240187 1240885 . + . ID=gene:Rv1115;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1115;logic_name=ena +Chromosome ena gene 1240187 1240885 . + . ID=gene:Rv1115;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1115;logic_name=ena Chromosome ena mRNA 1240187 1240885 . + . ID=transcript:Rv1115;Parent=gene:Rv1115;biotype=protein_coding;transcript_id=Rv1115 Chromosome ena exon 1240187 1240885 . + . Parent=transcript:Rv1115;Name=Rv1115-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1115-1;rank=1 Chromosome ena CDS 1240187 1240885 . + 0 ID=CDS:Rv1115;Parent=transcript:Rv1115;protein_id=Rv1115 ### -Chromosome ena gene 1241003 1241188 . + . ID=gene:Rv1116;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1116;logic_name=ena +Chromosome ena gene 1241003 1241188 . + . ID=gene:Rv1116;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1116;logic_name=ena Chromosome ena mRNA 1241003 1241188 . + . ID=transcript:Rv1116;Parent=gene:Rv1116;biotype=protein_coding;transcript_id=Rv1116 Chromosome ena exon 1241003 1241188 . + . Parent=transcript:Rv1116;Name=Rv1116-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1116-1;rank=1 Chromosome ena CDS 1241003 1241188 . + 0 ID=CDS:Rv1116;Parent=transcript:Rv1116;protein_id=Rv1116 ### -Chromosome ena gene 1241115 1241390 . - . ID=gene:Rv1116A;biotype=protein_coding;description=Conserved hypothetical protein (fragment);gene_id=Rv1116A;logic_name=ena +Chromosome ena gene 1241115 1241390 . - . ID=gene:Rv1116A;biotype=protein_coding;description=Conserved hypothetical protein (fragment);gene_id=Rv1116A;logic_name=ena Chromosome ena mRNA 1241115 1241390 . - . ID=transcript:Rv1116A;Parent=gene:Rv1116A;biotype=protein_coding;transcript_id=Rv1116A Chromosome ena exon 1241115 1241390 . - . Parent=transcript:Rv1116A;Name=Rv1116A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1116A-1;rank=1 Chromosome ena CDS 1241115 1241390 . - 0 ID=CDS:Rv1116A;Parent=transcript:Rv1116A;protein_id=Rv1116A ### -Chromosome ena gene 1241633 1241956 . + . ID=gene:Rv1117;biotype=protein_coding;description=Conserved protein;gene_id=Rv1117;logic_name=ena +Chromosome ena gene 1241633 1241956 . + . ID=gene:Rv1117;biotype=protein_coding;description=Conserved protein;gene_id=Rv1117;logic_name=ena Chromosome ena mRNA 1241633 1241956 . + . ID=transcript:Rv1117;Parent=gene:Rv1117;biotype=protein_coding;transcript_id=Rv1117 Chromosome ena exon 1241633 1241956 . + . Parent=transcript:Rv1117;Name=Rv1117-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1117-1;rank=1 Chromosome ena CDS 1241633 1241956 . + 0 ID=CDS:Rv1117;Parent=transcript:Rv1117;protein_id=Rv1117 ### -Chromosome ena gene 1241971 1242831 . - . ID=gene:Rv1118c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1118c;logic_name=ena +Chromosome ena gene 1241971 1242831 . - . ID=gene:Rv1118c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1118c;logic_name=ena Chromosome ena mRNA 1241971 1242831 . - . ID=transcript:Rv1118c;Parent=gene:Rv1118c;biotype=protein_coding;transcript_id=Rv1118c Chromosome ena exon 1241971 1242831 . - . Parent=transcript:Rv1118c;Name=Rv1118c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1118c-1;rank=1 Chromosome ena CDS 1241971 1242831 . - 0 ID=CDS:Rv1118c;Parent=transcript:Rv1118c;protein_id=Rv1118c ### -Chromosome ena gene 1242864 1243013 . - . ID=gene:Rv1119c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1119c;logic_name=ena +Chromosome ena gene 1242864 1243013 . - . ID=gene:Rv1119c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1119c;logic_name=ena Chromosome ena mRNA 1242864 1243013 . - . ID=transcript:Rv1119c;Parent=gene:Rv1119c;biotype=protein_coding;transcript_id=Rv1119c Chromosome ena exon 1242864 1243013 . - . Parent=transcript:Rv1119c;Name=Rv1119c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1119c-1;rank=1 Chromosome ena CDS 1242864 1243013 . - 0 ID=CDS:Rv1119c;Parent=transcript:Rv1119c;protein_id=Rv1119c ### -Chromosome ena gene 1243010 1243504 . - . ID=gene:Rv1120c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1120c;logic_name=ena +Chromosome ena gene 1243010 1243504 . - . ID=gene:Rv1120c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1120c;logic_name=ena Chromosome ena mRNA 1243010 1243504 . - . ID=transcript:Rv1120c;Parent=gene:Rv1120c;biotype=protein_coding;transcript_id=Rv1120c Chromosome ena exon 1243010 1243504 . - . Parent=transcript:Rv1120c;Name=Rv1120c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1120c-1;rank=1 Chromosome ena CDS 1243010 1243504 . - 0 ID=CDS:Rv1120c;Parent=transcript:Rv1120c;protein_id=Rv1120c ### -Chromosome ena gene 1243707 1245107 . + . ID=gene:Rv1121;Name=zwf1;biotype=protein_coding;description=Probable glucose-6-phosphate 1-dehydrogenase Zwf1 (G6PD);gene_id=Rv1121;logic_name=ena +Chromosome ena gene 1243707 1245107 . + . ID=gene:Rv1121;Name=zwf1;biotype=protein_coding;description=Probable glucose-6-phosphate 1-dehydrogenase Zwf1 (G6PD);gene_id=Rv1121;logic_name=ena Chromosome ena mRNA 1243707 1245107 . + . ID=transcript:Rv1121;Parent=gene:Rv1121;Name=zwf1-1;biotype=protein_coding;transcript_id=Rv1121 Chromosome ena exon 1243707 1245107 . + . Parent=transcript:Rv1121;Name=Rv1121-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1121-1;rank=1 Chromosome ena CDS 1243707 1245107 . + 0 ID=CDS:Rv1121;Parent=transcript:Rv1121;protein_id=Rv1121 ### -Chromosome ena gene 1245129 1246151 . + . ID=gene:Rv1122;Name=gnd2;biotype=protein_coding;description=Probable 6-phosphogluconate dehydrogenase%2Cdecarboxylating Gnd2;gene_id=Rv1122;logic_name=ena +Chromosome ena gene 1245129 1246151 . + . ID=gene:Rv1122;Name=gnd2;biotype=protein_coding;description=Probable 6-phosphogluconate dehydrogenase%2Cdecarboxylating Gnd2;gene_id=Rv1122;logic_name=ena Chromosome ena mRNA 1245129 1246151 . + . ID=transcript:Rv1122;Parent=gene:Rv1122;Name=gnd2-1;biotype=protein_coding;transcript_id=Rv1122 Chromosome ena exon 1245129 1246151 . + . Parent=transcript:Rv1122;Name=Rv1122-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1122-1;rank=1 Chromosome ena CDS 1245129 1246151 . + 0 ID=CDS:Rv1122;Parent=transcript:Rv1122;protein_id=Rv1122 ### -Chromosome ena gene 1246144 1247052 . - . ID=gene:Rv1123c;Name=bpoB;biotype=protein_coding;description=Possible peroxidase BpoB (non-haem peroxidase);gene_id=Rv1123c;logic_name=ena +Chromosome ena gene 1246144 1247052 . - . ID=gene:Rv1123c;Name=bpoB;biotype=protein_coding;description=Possible peroxidase BpoB (non-haem peroxidase);gene_id=Rv1123c;logic_name=ena Chromosome ena mRNA 1246144 1247052 . - . ID=transcript:Rv1123c;Parent=gene:Rv1123c;Name=bpoB-1;biotype=protein_coding;transcript_id=Rv1123c Chromosome ena exon 1246144 1247052 . - . Parent=transcript:Rv1123c;Name=Rv1123c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1123c-1;rank=1 Chromosome ena CDS 1246144 1247052 . - 0 ID=CDS:Rv1123c;Parent=transcript:Rv1123c;protein_id=Rv1123c ### -Chromosome ena gene 1247127 1248077 . + . ID=gene:Rv1124;Name=ephC;biotype=protein_coding;description=Probable epoxide hydrolase EphC (epoxide hydratase);gene_id=Rv1124;logic_name=ena +Chromosome ena gene 1247127 1248077 . + . ID=gene:Rv1124;Name=ephC;biotype=protein_coding;description=Probable epoxide hydrolase EphC (epoxide hydratase);gene_id=Rv1124;logic_name=ena Chromosome ena mRNA 1247127 1248077 . + . ID=transcript:Rv1124;Parent=gene:Rv1124;Name=ephC-1;biotype=protein_coding;transcript_id=Rv1124 Chromosome ena exon 1247127 1248077 . + . Parent=transcript:Rv1124;Name=Rv1124-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1124-1;rank=1 Chromosome ena CDS 1247127 1248077 . + 0 ID=CDS:Rv1124;Parent=transcript:Rv1124;protein_id=Rv1124 ### -Chromosome ena gene 1248082 1249326 . + . ID=gene:Rv1125;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1125;logic_name=ena +Chromosome ena gene 1248082 1249326 . + . ID=gene:Rv1125;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1125;logic_name=ena Chromosome ena mRNA 1248082 1249326 . + . ID=transcript:Rv1125;Parent=gene:Rv1125;biotype=protein_coding;transcript_id=Rv1125 Chromosome ena exon 1248082 1249326 . + . Parent=transcript:Rv1125;Name=Rv1125-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1125-1;rank=1 Chromosome ena CDS 1248082 1249326 . + 0 ID=CDS:Rv1125;Parent=transcript:Rv1125;protein_id=Rv1125 ### -Chromosome ena gene 1249330 1249935 . - . ID=gene:Rv1126c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1126c;logic_name=ena +Chromosome ena gene 1249330 1249935 . - . ID=gene:Rv1126c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1126c;logic_name=ena Chromosome ena mRNA 1249330 1249935 . - . ID=transcript:Rv1126c;Parent=gene:Rv1126c;biotype=protein_coding;transcript_id=Rv1126c Chromosome ena exon 1249330 1249935 . - . Parent=transcript:Rv1126c;Name=Rv1126c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1126c-1;rank=1 Chromosome ena CDS 1249330 1249935 . - 0 ID=CDS:Rv1126c;Parent=transcript:Rv1126c;protein_id=Rv1126c ### -Chromosome ena gene 1249932 1251404 . - . ID=gene:Rv1127c;Name=ppdK;biotype=protein_coding;description=Probable pyruvate%2C phosphate dikinase PpdK;gene_id=Rv1127c;logic_name=ena +Chromosome ena gene 1249932 1251404 . - . ID=gene:Rv1127c;Name=ppdK;biotype=protein_coding;description=Probable pyruvate%2C phosphate dikinase PpdK;gene_id=Rv1127c;logic_name=ena Chromosome ena mRNA 1249932 1251404 . - . ID=transcript:Rv1127c;Parent=gene:Rv1127c;Name=ppdK-1;biotype=protein_coding;transcript_id=Rv1127c Chromosome ena exon 1249932 1251404 . - . Parent=transcript:Rv1127c;Name=Rv1127c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1127c-1;rank=1 Chromosome ena CDS 1249932 1251404 . - 0 ID=CDS:Rv1127c;Parent=transcript:Rv1127c;protein_id=Rv1127c ### -Chromosome ena gene 1251617 1252972 . - . ID=gene:Rv1128c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1128c;logic_name=ena +Chromosome ena gene 1251617 1252972 . - . ID=gene:Rv1128c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1128c;logic_name=ena Chromosome ena mRNA 1251617 1252972 . - . ID=transcript:Rv1128c;Parent=gene:Rv1128c;biotype=protein_coding;transcript_id=Rv1128c Chromosome ena exon 1251617 1252972 . - . Parent=transcript:Rv1128c;Name=Rv1128c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1128c-1;rank=1 Chromosome ena CDS 1251617 1252972 . - 0 ID=CDS:Rv1128c;Parent=transcript:Rv1128c;protein_id=Rv1128c ### -Chromosome ena gene 1253074 1254534 . - . ID=gene:Rv1129c;biotype=protein_coding;description=Probable transcriptional regulator protein;gene_id=Rv1129c;logic_name=ena +Chromosome ena gene 1253074 1254534 . - . ID=gene:Rv1129c;biotype=protein_coding;description=Probable transcriptional regulator protein;gene_id=Rv1129c;logic_name=ena Chromosome ena mRNA 1253074 1254534 . - . ID=transcript:Rv1129c;Parent=gene:Rv1129c;biotype=protein_coding;transcript_id=Rv1129c Chromosome ena exon 1253074 1254534 . - . Parent=transcript:Rv1129c;Name=Rv1129c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1129c-1;rank=1 Chromosome ena CDS 1253074 1254534 . - 0 ID=CDS:Rv1129c;Parent=transcript:Rv1129c;protein_id=Rv1129c ### -Chromosome ena gene 1254555 1256135 . + . ID=gene:Rv1130;Name=prpD;biotype=protein_coding;description=Possible methylcitrate dehydratase PrpD;gene_id=Rv1130;logic_name=ena +Chromosome ena gene 1254555 1256135 . + . ID=gene:Rv1130;Name=prpD;biotype=protein_coding;description=Possible methylcitrate dehydratase PrpD;gene_id=Rv1130;logic_name=ena Chromosome ena mRNA 1254555 1256135 . + . ID=transcript:Rv1130;Parent=gene:Rv1130;Name=prpD-1;biotype=protein_coding;transcript_id=Rv1130 Chromosome ena exon 1254555 1256135 . + . Parent=transcript:Rv1130;Name=Rv1130-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1130-1;rank=1 Chromosome ena CDS 1254555 1256135 . + 0 ID=CDS:Rv1130;Parent=transcript:Rv1130;protein_id=Rv1130 ### -Chromosome ena gene 1256132 1257313 . + . ID=gene:Rv1131;Name=prpC;biotype=protein_coding;description=Probable methylcitrate synthase PrpC;gene_id=Rv1131;logic_name=ena +Chromosome ena gene 1256132 1257313 . + . ID=gene:Rv1131;Name=prpC;biotype=protein_coding;description=Probable methylcitrate synthase PrpC;gene_id=Rv1131;logic_name=ena Chromosome ena mRNA 1256132 1257313 . + . ID=transcript:Rv1131;Parent=gene:Rv1131;Name=prpC-1;biotype=protein_coding;transcript_id=Rv1131 Chromosome ena exon 1256132 1257313 . + . Parent=transcript:Rv1131;Name=Rv1131-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1131-1;rank=1 Chromosome ena CDS 1256132 1257313 . + 0 ID=CDS:Rv1131;Parent=transcript:Rv1131;protein_id=Rv1131 ### -Chromosome ena gene 1257325 1259055 . + . ID=gene:Rv1132;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1132;logic_name=ena +Chromosome ena gene 1257325 1259055 . + . ID=gene:Rv1132;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1132;logic_name=ena Chromosome ena mRNA 1257325 1259055 . + . ID=transcript:Rv1132;Parent=gene:Rv1132;biotype=protein_coding;transcript_id=Rv1132 Chromosome ena exon 1257325 1259055 . + . Parent=transcript:Rv1132;Name=Rv1132-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1132-1;rank=1 Chromosome ena CDS 1257325 1259055 . + 0 ID=CDS:Rv1132;Parent=transcript:Rv1132;protein_id=Rv1132 ### -Chromosome ena gene 1259067 1261346 . - . ID=gene:Rv1133c;Name=metE;biotype=protein_coding;description=Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE (methionine synthase%2C vitamin-B12 independent isozyme);gene_id=Rv1133c;logic_name=ena +Chromosome ena gene 1259067 1261346 . - . ID=gene:Rv1133c;Name=metE;biotype=protein_coding;description=Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE (methionine synthase%2C vitamin-B12 independent isozyme);gene_id=Rv1133c;logic_name=ena Chromosome ena mRNA 1259067 1261346 . - . ID=transcript:Rv1133c;Parent=gene:Rv1133c;Name=metE-1;biotype=protein_coding;transcript_id=Rv1133c Chromosome ena exon 1259067 1261346 . - . Parent=transcript:Rv1133c;Name=Rv1133c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1133c-1;rank=1 Chromosome ena CDS 1259067 1261346 . - 0 ID=CDS:Rv1133c;Parent=transcript:Rv1133c;protein_id=Rv1133c ### -Chromosome ena gene 1261922 1262158 . + . ID=gene:Rv1134;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1134;logic_name=ena +Chromosome ena gene 1261922 1262158 . + . ID=gene:Rv1134;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1134;logic_name=ena Chromosome ena mRNA 1261922 1262158 . + . ID=transcript:Rv1134;Parent=gene:Rv1134;biotype=protein_coding;transcript_id=Rv1134 Chromosome ena exon 1261922 1262158 . + . Parent=transcript:Rv1134;Name=Rv1134-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1134-1;rank=1 Chromosome ena CDS 1261922 1262158 . + 0 ID=CDS:Rv1134;Parent=transcript:Rv1134;protein_id=Rv1134 ### -Chromosome ena gene 1262272 1264128 . - . ID=gene:Rv1135c;Name=PPE16;biotype=protein_coding;description=PPE family protein PPE16;gene_id=Rv1135c;logic_name=ena +Chromosome ena gene 1262272 1264128 . - . ID=gene:Rv1135c;Name=PPE16;biotype=protein_coding;description=PPE family protein PPE16;gene_id=Rv1135c;logic_name=ena Chromosome ena mRNA 1262272 1264128 . - . ID=transcript:Rv1135c;Parent=gene:Rv1135c;Name=PPE16-1;biotype=protein_coding;transcript_id=Rv1135c Chromosome ena exon 1262272 1264128 . - . Parent=transcript:Rv1135c;Name=Rv1135c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1135c-1;rank=1 Chromosome ena CDS 1262272 1264128 . - 0 ID=CDS:Rv1135c;Parent=transcript:Rv1135c;protein_id=Rv1135c ### -Chromosome ena gene 1264314 1264556 . + . ID=gene:Rv1135A;biotype=protein_coding;description=Possible acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase);gene_id=Rv1135A;logic_name=ena +Chromosome ena gene 1264314 1264556 . + . ID=gene:Rv1135A;biotype=protein_coding;description=Possible acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase);gene_id=Rv1135A;logic_name=ena Chromosome ena mRNA 1264314 1264556 . + . ID=transcript:Rv1135A;Parent=gene:Rv1135A;biotype=protein_coding;transcript_id=Rv1135A Chromosome ena exon 1264314 1264556 . + . Parent=transcript:Rv1135A;Name=Rv1135A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1135A-1;rank=1 Chromosome ena CDS 1264314 1264556 . + 0 ID=CDS:Rv1135A;Parent=transcript:Rv1135A;protein_id=Rv1135A ### -Chromosome ena gene 1264606 1264947 . + . ID=gene:Rv1136;biotype=protein_coding;description=Possible enoyl-CoA hydratase;gene_id=Rv1136;logic_name=ena +Chromosome ena gene 1264606 1264947 . + . ID=gene:Rv1136;biotype=protein_coding;description=Possible enoyl-CoA hydratase;gene_id=Rv1136;logic_name=ena Chromosome ena mRNA 1264606 1264947 . + . ID=transcript:Rv1136;Parent=gene:Rv1136;biotype=protein_coding;transcript_id=Rv1136 Chromosome ena exon 1264606 1264947 . + . Parent=transcript:Rv1136;Name=Rv1136-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1136-1;rank=1 Chromosome ena CDS 1264606 1264947 . + 0 ID=CDS:Rv1136;Parent=transcript:Rv1136;protein_id=Rv1136 ### -Chromosome ena gene 1265087 1265455 . - . ID=gene:Rv1137c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1137c;logic_name=ena +Chromosome ena gene 1265087 1265455 . - . ID=gene:Rv1137c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1137c;logic_name=ena Chromosome ena mRNA 1265087 1265455 . - . ID=transcript:Rv1137c;Parent=gene:Rv1137c;biotype=protein_coding;transcript_id=Rv1137c Chromosome ena exon 1265087 1265455 . - . Parent=transcript:Rv1137c;Name=Rv1137c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1137c-1;rank=1 Chromosome ena CDS 1265087 1265455 . - 0 ID=CDS:Rv1137c;Parent=transcript:Rv1137c;protein_id=Rv1137c ### -Chromosome ena gene 1265472 1266488 . - . ID=gene:Rv1138c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1138c;logic_name=ena +Chromosome ena gene 1265472 1266488 . - . ID=gene:Rv1138c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1138c;logic_name=ena Chromosome ena mRNA 1265472 1266488 . - . ID=transcript:Rv1138c;Parent=gene:Rv1138c;biotype=protein_coding;transcript_id=Rv1138c Chromosome ena exon 1265472 1266488 . - . Parent=transcript:Rv1138c;Name=Rv1138c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1138c-1;rank=1 Chromosome ena CDS 1265472 1266488 . - 0 ID=CDS:Rv1138c;Parent=transcript:Rv1138c;protein_id=Rv1138c ### -Chromosome ena gene 1266485 1266985 . - . ID=gene:Rv1139c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1139c;logic_name=ena +Chromosome ena gene 1266485 1266985 . - . ID=gene:Rv1139c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1139c;logic_name=ena Chromosome ena mRNA 1266485 1266985 . - . ID=transcript:Rv1139c;Parent=gene:Rv1139c;biotype=protein_coding;transcript_id=Rv1139c Chromosome ena exon 1266485 1266985 . - . Parent=transcript:Rv1139c;Name=Rv1139c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1139c-1;rank=1 Chromosome ena CDS 1266485 1266985 . - 0 ID=CDS:Rv1139c;Parent=transcript:Rv1139c;protein_id=Rv1139c ### -Chromosome ena gene 1267347 1268195 . + . ID=gene:Rv1140;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1140;logic_name=ena +Chromosome ena gene 1267347 1268195 . + . ID=gene:Rv1140;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1140;logic_name=ena Chromosome ena mRNA 1267347 1268195 . + . ID=transcript:Rv1140;Parent=gene:Rv1140;biotype=protein_coding;transcript_id=Rv1140 Chromosome ena exon 1267347 1268195 . + . Parent=transcript:Rv1140;Name=Rv1140-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1140-1;rank=1 Chromosome ena CDS 1267347 1268195 . + 0 ID=CDS:Rv1140;Parent=transcript:Rv1140;protein_id=Rv1140 ### -Chromosome ena gene 1268203 1269009 . - . ID=gene:Rv1141c;Name=echA11;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA11 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1141c;logic_name=ena +Chromosome ena gene 1268203 1269009 . - . ID=gene:Rv1141c;Name=echA11;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA11 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1141c;logic_name=ena Chromosome ena mRNA 1268203 1269009 . - . ID=transcript:Rv1141c;Parent=gene:Rv1141c;Name=echA11-1;biotype=protein_coding;transcript_id=Rv1141c Chromosome ena exon 1268203 1269009 . - . Parent=transcript:Rv1141c;Name=Rv1141c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1141c-1;rank=1 Chromosome ena CDS 1268203 1269009 . - 0 ID=CDS:Rv1141c;Parent=transcript:Rv1141c;protein_id=Rv1141c ### -Chromosome ena gene 1269152 1269958 . - . ID=gene:Rv1142c;Name=echA10;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA10 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1142c;logic_name=ena +Chromosome ena gene 1269152 1269958 . - . ID=gene:Rv1142c;Name=echA10;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA10 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1142c;logic_name=ena Chromosome ena mRNA 1269152 1269958 . - . ID=transcript:Rv1142c;Parent=gene:Rv1142c;Name=echA10-1;biotype=protein_coding;transcript_id=Rv1142c Chromosome ena exon 1269152 1269958 . - . Parent=transcript:Rv1142c;Name=Rv1142c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1142c-1;rank=1 Chromosome ena CDS 1269152 1269958 . - 0 ID=CDS:Rv1142c;Parent=transcript:Rv1142c;protein_id=Rv1142c ### -Chromosome ena gene 1270062 1271144 . + . ID=gene:Rv1143;Name=mcr;biotype=protein_coding;description=Probable alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase );gene_id=Rv1143;logic_name=ena +Chromosome ena gene 1270062 1271144 . + . ID=gene:Rv1143;Name=mcr;biotype=protein_coding;description=Probable alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase );gene_id=Rv1143;logic_name=ena Chromosome ena mRNA 1270062 1271144 . + . ID=transcript:Rv1143;Parent=gene:Rv1143;Name=mcr-1;biotype=protein_coding;transcript_id=Rv1143 Chromosome ena exon 1270062 1271144 . + . Parent=transcript:Rv1143;Name=Rv1143-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1143-1;rank=1 Chromosome ena CDS 1270062 1271144 . + 0 ID=CDS:Rv1143;Parent=transcript:Rv1143;protein_id=Rv1143 ### -Chromosome ena gene 1271156 1271908 . + . ID=gene:Rv1144;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1144;logic_name=ena +Chromosome ena gene 1271156 1271908 . + . ID=gene:Rv1144;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1144;logic_name=ena Chromosome ena mRNA 1271156 1271908 . + . ID=transcript:Rv1144;Parent=gene:Rv1144;biotype=protein_coding;transcript_id=Rv1144 Chromosome ena exon 1271156 1271908 . + . Parent=transcript:Rv1144;Name=Rv1144-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1144-1;rank=1 Chromosome ena CDS 1271156 1271908 . + 0 ID=CDS:Rv1144;Parent=transcript:Rv1144;protein_id=Rv1144 ### -Chromosome ena gene 1272423 1273334 . + . ID=gene:Rv1145;Name=mmpL13a;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL13a;gene_id=Rv1145;logic_name=ena +Chromosome ena gene 1272423 1273334 . + . ID=gene:Rv1145;Name=mmpL13a;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL13a;gene_id=Rv1145;logic_name=ena Chromosome ena mRNA 1272423 1273334 . + . ID=transcript:Rv1145;Parent=gene:Rv1145;Name=mmpL13a-1;biotype=protein_coding;transcript_id=Rv1145 Chromosome ena exon 1272423 1273334 . + . Parent=transcript:Rv1145;Name=Rv1145-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1145-1;rank=1 Chromosome ena CDS 1272423 1273334 . + 0 ID=CDS:Rv1145;Parent=transcript:Rv1145;protein_id=Rv1145 ### -Chromosome ena gene 1273355 1274767 . + . ID=gene:Rv1146;Name=mmpL13b;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL13b;gene_id=Rv1146;logic_name=ena +Chromosome ena gene 1273355 1274767 . + . ID=gene:Rv1146;Name=mmpL13b;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL13b;gene_id=Rv1146;logic_name=ena Chromosome ena mRNA 1273355 1274767 . + . ID=transcript:Rv1146;Parent=gene:Rv1146;Name=mmpL13b-1;biotype=protein_coding;transcript_id=Rv1146 Chromosome ena exon 1273355 1274767 . + . Parent=transcript:Rv1146;Name=Rv1146-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1146-1;rank=1 Chromosome ena CDS 1273355 1274767 . + 0 ID=CDS:Rv1146;Parent=transcript:Rv1146;protein_id=Rv1146 ### -Chromosome ena gene 1274900 1275550 . + . ID=gene:Rv1147;biotype=protein_coding;description=Conserved protein;gene_id=Rv1147;logic_name=ena +Chromosome ena gene 1274900 1275550 . + . ID=gene:Rv1147;biotype=protein_coding;description=Conserved protein;gene_id=Rv1147;logic_name=ena Chromosome ena mRNA 1274900 1275550 . + . ID=transcript:Rv1147;Parent=gene:Rv1147;biotype=protein_coding;transcript_id=Rv1147 Chromosome ena exon 1274900 1275550 . + . Parent=transcript:Rv1147;Name=Rv1147-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1147-1;rank=1 Chromosome ena CDS 1274900 1275550 . + 0 ID=CDS:Rv1147;Parent=transcript:Rv1147;protein_id=Rv1147 ### -Chromosome ena gene 1276300 1277748 . - . ID=gene:Rv1148c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1148c;logic_name=ena +Chromosome ena gene 1276300 1277748 . - . ID=gene:Rv1148c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1148c;logic_name=ena Chromosome ena mRNA 1276300 1277748 . - . ID=transcript:Rv1148c;Parent=gene:Rv1148c;biotype=protein_coding;transcript_id=Rv1148c Chromosome ena exon 1276300 1277748 . - . Parent=transcript:Rv1148c;Name=Rv1148c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1148c-1;rank=1 Chromosome ena CDS 1276300 1277748 . - 0 ID=CDS:Rv1148c;Parent=transcript:Rv1148c;protein_id=Rv1148c ### -Chromosome ena_mobile_element biological_region 1277843 1278826 . + . external_name=IS-LIKE-2%2C len: 984 nt. Insertion sequence element IS-LIKE.;logic_name=ena_mobile_element -Chromosome ena gene 1277893 1278300 . + . ID=gene:Rv1149;biotype=protein_coding;description=Possible transposase;gene_id=Rv1149;logic_name=ena +Chromosome ena_mobile_element biological_region 1277843 1278826 . + . external_name=IS-LIKE-2%2C len: 984 nt. Insertion sequence element IS-LIKE.;logic_name=ena_mobile_element +Chromosome ena gene 1277893 1278300 . + . ID=gene:Rv1149;biotype=protein_coding;description=Possible transposase;gene_id=Rv1149;logic_name=ena Chromosome ena mRNA 1277893 1278300 . + . ID=transcript:Rv1149;Parent=gene:Rv1149;biotype=protein_coding;transcript_id=Rv1149 Chromosome ena exon 1277893 1278300 . + . Parent=transcript:Rv1149;Name=Rv1149-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1149-1;rank=1 Chromosome ena CDS 1277893 1278300 . + 0 ID=CDS:Rv1149;Parent=transcript:Rv1149;protein_id=Rv1149 ### -Chromosome ena pseudogene 1278269 1278820 . + . ID=gene:Rv1150;biotype=pseudogene;description=Possible transposase (fragment);gene_id=Rv1150;logic_name=ena +Chromosome ena pseudogene 1278269 1278820 . + . ID=gene:Rv1150;biotype=pseudogene;description=Possible transposase (fragment);gene_id=Rv1150;logic_name=ena Chromosome ena pseudogene 1278269 1278820 . + . ID=transcript:Rv1150;Parent=gene:Rv1150;biotype=pseudogene;transcript_id=Rv1150 Chromosome ena exon 1278269 1278820 . + . Parent=transcript:Rv1150;Name=Rv1150-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1150-1;rank=1 ### -Chromosome ena gene 1278904 1279617 . - . ID=gene:Rv1151c;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv1151c;logic_name=ena +Chromosome ena gene 1278904 1279617 . - . ID=gene:Rv1151c;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv1151c;logic_name=ena Chromosome ena mRNA 1278904 1279617 . - . ID=transcript:Rv1151c;Parent=gene:Rv1151c;biotype=protein_coding;transcript_id=Rv1151c Chromosome ena exon 1278904 1279617 . - . Parent=transcript:Rv1151c;Name=Rv1151c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1151c-1;rank=1 Chromosome ena CDS 1278904 1279617 . - 0 ID=CDS:Rv1151c;Parent=transcript:Rv1151c;protein_id=Rv1151c ### -Chromosome ena gene 1279655 1280020 . + . ID=gene:Rv1152;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1152;logic_name=ena +Chromosome ena gene 1279655 1280020 . + . ID=gene:Rv1152;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1152;logic_name=ena Chromosome ena mRNA 1279655 1280020 . + . ID=transcript:Rv1152;Parent=gene:Rv1152;biotype=protein_coding;transcript_id=Rv1152 Chromosome ena exon 1279655 1280020 . + . Parent=transcript:Rv1152;Name=Rv1152-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1152-1;rank=1 Chromosome ena CDS 1279655 1280020 . + 0 ID=CDS:Rv1152;Parent=transcript:Rv1152;protein_id=Rv1152 ### -Chromosome ena gene 1279998 1280846 . - . ID=gene:Rv1153c;Name=omt;biotype=protein_coding;description=Probable O-methyltransferase Omt;gene_id=Rv1153c;logic_name=ena +Chromosome ena gene 1279998 1280846 . - . ID=gene:Rv1153c;Name=omt;biotype=protein_coding;description=Probable O-methyltransferase Omt;gene_id=Rv1153c;logic_name=ena Chromosome ena mRNA 1279998 1280846 . - . ID=transcript:Rv1153c;Parent=gene:Rv1153c;Name=omt-1;biotype=protein_coding;transcript_id=Rv1153c Chromosome ena exon 1279998 1280846 . - . Parent=transcript:Rv1153c;Name=Rv1153c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1153c-1;rank=1 Chromosome ena CDS 1279998 1280846 . - 0 ID=CDS:Rv1153c;Parent=transcript:Rv1153c;protein_id=Rv1153c ### -Chromosome ena gene 1280843 1281484 . - . ID=gene:Rv1154c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1154c;logic_name=ena +Chromosome ena gene 1280843 1281484 . - . ID=gene:Rv1154c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1154c;logic_name=ena Chromosome ena mRNA 1280843 1281484 . - . ID=transcript:Rv1154c;Parent=gene:Rv1154c;biotype=protein_coding;transcript_id=Rv1154c Chromosome ena exon 1280843 1281484 . - . Parent=transcript:Rv1154c;Name=Rv1154c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1154c-1;rank=1 Chromosome ena CDS 1280843 1281484 . - 0 ID=CDS:Rv1154c;Parent=transcript:Rv1154c;protein_id=Rv1154c ### -Chromosome ena gene 1281429 1281872 . + . ID=gene:Rv1155;biotype=protein_coding;description=Possible pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv1155;logic_name=ena +Chromosome ena gene 1281429 1281872 . + . ID=gene:Rv1155;biotype=protein_coding;description=Possible pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv1155;logic_name=ena Chromosome ena mRNA 1281429 1281872 . + . ID=transcript:Rv1155;Parent=gene:Rv1155;biotype=protein_coding;transcript_id=Rv1155 Chromosome ena exon 1281429 1281872 . + . Parent=transcript:Rv1155;Name=Rv1155-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1155-1;rank=1 Chromosome ena CDS 1281429 1281872 . + 0 ID=CDS:Rv1155;Parent=transcript:Rv1155;protein_id=Rv1155 ### -Chromosome ena gene 1282306 1282893 . + . ID=gene:Rv1156;biotype=protein_coding;description=Conserved protein;gene_id=Rv1156;logic_name=ena +Chromosome ena gene 1282306 1282893 . + . ID=gene:Rv1156;biotype=protein_coding;description=Conserved protein;gene_id=Rv1156;logic_name=ena Chromosome ena mRNA 1282306 1282893 . + . ID=transcript:Rv1156;Parent=gene:Rv1156;biotype=protein_coding;transcript_id=Rv1156 Chromosome ena exon 1282306 1282893 . + . Parent=transcript:Rv1156;Name=Rv1156-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1156-1;rank=1 Chromosome ena CDS 1282306 1282893 . + 0 ID=CDS:Rv1156;Parent=transcript:Rv1156;protein_id=Rv1156 ### -Chromosome ena gene 1283056 1284171 . - . ID=gene:Rv1157c;biotype=protein_coding;description=Conserved ala-%2C pro-rich protein;gene_id=Rv1157c;logic_name=ena +Chromosome ena gene 1283056 1284171 . - . ID=gene:Rv1157c;biotype=protein_coding;description=Conserved ala-%2C pro-rich protein;gene_id=Rv1157c;logic_name=ena Chromosome ena mRNA 1283056 1284171 . - . ID=transcript:Rv1157c;Parent=gene:Rv1157c;biotype=protein_coding;transcript_id=Rv1157c Chromosome ena exon 1283056 1284171 . - . Parent=transcript:Rv1157c;Name=Rv1157c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1157c-1;rank=1 Chromosome ena CDS 1283056 1284171 . - 0 ID=CDS:Rv1157c;Parent=transcript:Rv1157c;protein_id=Rv1157c @@ -6086,202 +6086,202 @@ Chromosome ena transcript 1283693 1283815 . + . ID=transcript:EBG00000313317;Par Chromosome ena exon 1283693 1283815 . + . Parent=transcript:EBG00000313317;Name=EBG00000313317;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313317;rank=1 ### Chromosome ena_gene biological_region 1283693 1283815 . + . external_name=AL123456.3:gene:1283693..1283815;logic_name=ena_gene -Chromosome ena gene 1284179 1284862 . - . ID=gene:Rv1158c;biotype=protein_coding;description=Conserved hypothetical ala-%2C pro-rich protein;gene_id=Rv1158c;logic_name=ena +Chromosome ena gene 1284179 1284862 . - . ID=gene:Rv1158c;biotype=protein_coding;description=Conserved hypothetical ala-%2C pro-rich protein;gene_id=Rv1158c;logic_name=ena Chromosome ena mRNA 1284179 1284862 . - . ID=transcript:Rv1158c;Parent=gene:Rv1158c;biotype=protein_coding;transcript_id=Rv1158c Chromosome ena exon 1284179 1284862 . - . Parent=transcript:Rv1158c;Name=Rv1158c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1158c-1;rank=1 Chromosome ena CDS 1284179 1284862 . - 0 ID=CDS:Rv1158c;Parent=transcript:Rv1158c;protein_id=Rv1158c ### -Chromosome ena gene 1284992 1286287 . + . ID=gene:Rv1159;Name=pimE;biotype=protein_coding;description=Mannosyltransferase PimE;gene_id=Rv1159;logic_name=ena +Chromosome ena gene 1284992 1286287 . + . ID=gene:Rv1159;Name=pimE;biotype=protein_coding;description=Mannosyltransferase PimE;gene_id=Rv1159;logic_name=ena Chromosome ena mRNA 1284992 1286287 . + . ID=transcript:Rv1159;Parent=gene:Rv1159;Name=pimE-1;biotype=protein_coding;transcript_id=Rv1159 Chromosome ena exon 1284992 1286287 . + . Parent=transcript:Rv1159;Name=Rv1159-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1159-1;rank=1 Chromosome ena CDS 1284992 1286287 . + 0 ID=CDS:Rv1159;Parent=transcript:Rv1159;protein_id=Rv1159 ### -Chromosome ena gene 1286284 1286568 . - . ID=gene:Rv1159A;biotype=protein_coding;description=Unknown protein;gene_id=Rv1159A;logic_name=ena +Chromosome ena gene 1286284 1286568 . - . ID=gene:Rv1159A;biotype=protein_coding;description=Unknown protein;gene_id=Rv1159A;logic_name=ena Chromosome ena mRNA 1286284 1286568 . - . ID=transcript:Rv1159A;Parent=gene:Rv1159A;biotype=protein_coding;transcript_id=Rv1159A Chromosome ena exon 1286284 1286568 . - . Parent=transcript:Rv1159A;Name=Rv1159A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1159A-1;rank=1 Chromosome ena CDS 1286284 1286568 . - 0 ID=CDS:Rv1159A;Parent=transcript:Rv1159A;protein_id=Rv1159A ### -Chromosome ena gene 1286595 1287020 . + . ID=gene:Rv1160;Name=mutT2;biotype=protein_coding;description=Probable mutator protein MutT2 (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase);gene_id=Rv1160;logic_name=ena +Chromosome ena gene 1286595 1287020 . + . ID=gene:Rv1160;Name=mutT2;biotype=protein_coding;description=Probable mutator protein MutT2 (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase);gene_id=Rv1160;logic_name=ena Chromosome ena mRNA 1286595 1287020 . + . ID=transcript:Rv1160;Parent=gene:Rv1160;Name=mutT2-1;biotype=protein_coding;transcript_id=Rv1160 Chromosome ena exon 1286595 1287020 . + . Parent=transcript:Rv1160;Name=Rv1160-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1160-1;rank=1 Chromosome ena CDS 1286595 1287020 . + 0 ID=CDS:Rv1160;Parent=transcript:Rv1160;protein_id=Rv1160 ### -Chromosome ena gene 1287328 1291026 . + . ID=gene:Rv1161;Name=narG;biotype=protein_coding;description=Respiratory nitrate reductase (alpha chain) NarG;gene_id=Rv1161;logic_name=ena +Chromosome ena gene 1287328 1291026 . + . ID=gene:Rv1161;Name=narG;biotype=protein_coding;description=Respiratory nitrate reductase (alpha chain) NarG;gene_id=Rv1161;logic_name=ena Chromosome ena mRNA 1287328 1291026 . + . ID=transcript:Rv1161;Parent=gene:Rv1161;Name=narG-1;biotype=protein_coding;transcript_id=Rv1161 Chromosome ena exon 1287328 1291026 . + . Parent=transcript:Rv1161;Name=Rv1161-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1161-1;rank=1 Chromosome ena CDS 1287328 1291026 . + 0 ID=CDS:Rv1161;Parent=transcript:Rv1161;protein_id=Rv1161 ### -Chromosome ena gene 1291065 1292741 . + . ID=gene:Rv1162;Name=narH;biotype=protein_coding;description=Probable respiratory nitrate reductase (beta chain) NarH;gene_id=Rv1162;logic_name=ena +Chromosome ena gene 1291065 1292741 . + . ID=gene:Rv1162;Name=narH;biotype=protein_coding;description=Probable respiratory nitrate reductase (beta chain) NarH;gene_id=Rv1162;logic_name=ena Chromosome ena mRNA 1291065 1292741 . + . ID=transcript:Rv1162;Parent=gene:Rv1162;Name=narH-1;biotype=protein_coding;transcript_id=Rv1162 Chromosome ena exon 1291065 1292741 . + . Parent=transcript:Rv1162;Name=Rv1162-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1162-1;rank=1 Chromosome ena CDS 1291065 1292741 . + 0 ID=CDS:Rv1162;Parent=transcript:Rv1162;protein_id=Rv1162 ### -Chromosome ena gene 1292798 1293403 . + . ID=gene:Rv1163;Name=narJ;biotype=protein_coding;description=Probable respiratory nitrate reductase (delta chain) NarJ;gene_id=Rv1163;logic_name=ena +Chromosome ena gene 1292798 1293403 . + . ID=gene:Rv1163;Name=narJ;biotype=protein_coding;description=Probable respiratory nitrate reductase (delta chain) NarJ;gene_id=Rv1163;logic_name=ena Chromosome ena mRNA 1292798 1293403 . + . ID=transcript:Rv1163;Parent=gene:Rv1163;Name=narJ-1;biotype=protein_coding;transcript_id=Rv1163 Chromosome ena exon 1292798 1293403 . + . Parent=transcript:Rv1163;Name=Rv1163-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1163-1;rank=1 Chromosome ena CDS 1292798 1293403 . + 0 ID=CDS:Rv1163;Parent=transcript:Rv1163;protein_id=Rv1163 ### -Chromosome ena gene 1293406 1294146 . + . ID=gene:Rv1164;Name=narI;biotype=protein_coding;description=Probable respiratory nitrate reductase (gamma chain) NarI;gene_id=Rv1164;logic_name=ena +Chromosome ena gene 1293406 1294146 . + . ID=gene:Rv1164;Name=narI;biotype=protein_coding;description=Probable respiratory nitrate reductase (gamma chain) NarI;gene_id=Rv1164;logic_name=ena Chromosome ena mRNA 1293406 1294146 . + . ID=transcript:Rv1164;Parent=gene:Rv1164;Name=narI-1;biotype=protein_coding;transcript_id=Rv1164 Chromosome ena exon 1293406 1294146 . + . Parent=transcript:Rv1164;Name=Rv1164-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1164-1;rank=1 Chromosome ena CDS 1293406 1294146 . + 0 ID=CDS:Rv1164;Parent=transcript:Rv1164;protein_id=Rv1164 ### -Chromosome ena gene 1294168 1296054 . + . ID=gene:Rv1165;Name=typA;biotype=protein_coding;description=Possible GTP-binding translation elongation factor TypA (tyrosine phosphorylated protein A) (GTP-binding protein);gene_id=Rv1165;logic_name=ena +Chromosome ena gene 1294168 1296054 . + . ID=gene:Rv1165;Name=typA;biotype=protein_coding;description=Possible GTP-binding translation elongation factor TypA (tyrosine phosphorylated protein A) (GTP-binding protein);gene_id=Rv1165;logic_name=ena Chromosome ena mRNA 1294168 1296054 . + . ID=transcript:Rv1165;Parent=gene:Rv1165;Name=typA-1;biotype=protein_coding;transcript_id=Rv1165 Chromosome ena exon 1294168 1296054 . + . Parent=transcript:Rv1165;Name=Rv1165-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1165-1;rank=1 Chromosome ena CDS 1294168 1296054 . + 0 ID=CDS:Rv1165;Parent=transcript:Rv1165;protein_id=Rv1165 ### -Chromosome ena gene 1296152 1298059 . + . ID=gene:Rv1166;Name=lpqW;biotype=protein_coding;description=Probable conserved lipoprotein LpqW;gene_id=Rv1166;logic_name=ena +Chromosome ena gene 1296152 1298059 . + . ID=gene:Rv1166;Name=lpqW;biotype=protein_coding;description=Probable conserved lipoprotein LpqW;gene_id=Rv1166;logic_name=ena Chromosome ena mRNA 1296152 1298059 . + . ID=transcript:Rv1166;Parent=gene:Rv1166;Name=lpqW-1;biotype=protein_coding;transcript_id=Rv1166 Chromosome ena exon 1296152 1298059 . + . Parent=transcript:Rv1166;Name=Rv1166-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1166-1;rank=1 Chromosome ena CDS 1296152 1298059 . + 0 ID=CDS:Rv1166;Parent=transcript:Rv1166;protein_id=Rv1166 ### -Chromosome ena gene 1298087 1298692 . - . ID=gene:Rv1167c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1167c;logic_name=ena +Chromosome ena gene 1298087 1298692 . - . ID=gene:Rv1167c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1167c;logic_name=ena Chromosome ena mRNA 1298087 1298692 . - . ID=transcript:Rv1167c;Parent=gene:Rv1167c;biotype=protein_coding;transcript_id=Rv1167c Chromosome ena exon 1298087 1298692 . - . Parent=transcript:Rv1167c;Name=Rv1167c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1167c-1;rank=1 Chromosome ena CDS 1298087 1298692 . - 0 ID=CDS:Rv1167c;Parent=transcript:Rv1167c;protein_id=Rv1167c ### -Chromosome ena gene 1298764 1299804 . - . ID=gene:Rv1168c;Name=PPE17;biotype=protein_coding;description=PPE family protein PPE17;gene_id=Rv1168c;logic_name=ena +Chromosome ena gene 1298764 1299804 . - . ID=gene:Rv1168c;Name=PPE17;biotype=protein_coding;description=PPE family protein PPE17;gene_id=Rv1168c;logic_name=ena Chromosome ena mRNA 1298764 1299804 . - . ID=transcript:Rv1168c;Parent=gene:Rv1168c;Name=PPE17-1;biotype=protein_coding;transcript_id=Rv1168c Chromosome ena exon 1298764 1299804 . - . Parent=transcript:Rv1168c;Name=Rv1168c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1168c-1;rank=1 Chromosome ena CDS 1298764 1299804 . - 0 ID=CDS:Rv1168c;Parent=transcript:Rv1168c;protein_id=Rv1168c ### -Chromosome ena gene 1299822 1300124 . - . ID=gene:Rv1169c;Name=lipX;biotype=protein_coding;description=PE family protein. Possible lipase LipX.;gene_id=Rv1169c;logic_name=ena +Chromosome ena gene 1299822 1300124 . - . ID=gene:Rv1169c;Name=lipX;biotype=protein_coding;description=PE family protein. Possible lipase LipX.;gene_id=Rv1169c;logic_name=ena Chromosome ena mRNA 1299822 1300124 . - . ID=transcript:Rv1169c;Parent=gene:Rv1169c;Name=lipX-1;biotype=protein_coding;transcript_id=Rv1169c Chromosome ena exon 1299822 1300124 . - . Parent=transcript:Rv1169c;Name=Rv1169c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1169c-1;rank=1 Chromosome ena CDS 1299822 1300124 . - 0 ID=CDS:Rv1169c;Parent=transcript:Rv1169c;protein_id=Rv1169c ### -Chromosome ena gene 1300304 1301215 . + . ID=gene:Rv1170;Name=mshB;biotype=protein_coding;description=N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB (GlcNAc-Ins deacetylase);gene_id=Rv1170;logic_name=ena +Chromosome ena gene 1300304 1301215 . + . ID=gene:Rv1170;Name=mshB;biotype=protein_coding;description=N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB (GlcNAc-Ins deacetylase);gene_id=Rv1170;logic_name=ena Chromosome ena mRNA 1300304 1301215 . + . ID=transcript:Rv1170;Parent=gene:Rv1170;Name=mshB-1;biotype=protein_coding;transcript_id=Rv1170 Chromosome ena exon 1300304 1301215 . + . Parent=transcript:Rv1170;Name=Rv1170-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1170-1;rank=1 Chromosome ena CDS 1300304 1301215 . + 0 ID=CDS:Rv1170;Parent=transcript:Rv1170;protein_id=Rv1170 ### -Chromosome ena gene 1301307 1301747 . + . ID=gene:Rv1171;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1171;logic_name=ena +Chromosome ena gene 1301307 1301747 . + . ID=gene:Rv1171;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1171;logic_name=ena Chromosome ena mRNA 1301307 1301747 . + . ID=transcript:Rv1171;Parent=gene:Rv1171;biotype=protein_coding;transcript_id=Rv1171 Chromosome ena exon 1301307 1301747 . + . Parent=transcript:Rv1171;Name=Rv1171-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1171-1;rank=1 Chromosome ena CDS 1301307 1301747 . + 0 ID=CDS:Rv1171;Parent=transcript:Rv1171;protein_id=Rv1171 ### -Chromosome ena gene 1301755 1302681 . - . ID=gene:Rv1172c;Name=PE12;biotype=protein_coding;description=PE family protein PE12;gene_id=Rv1172c;logic_name=ena +Chromosome ena gene 1301755 1302681 . - . ID=gene:Rv1172c;Name=PE12;biotype=protein_coding;description=PE family protein PE12;gene_id=Rv1172c;logic_name=ena Chromosome ena mRNA 1301755 1302681 . - . ID=transcript:Rv1172c;Parent=gene:Rv1172c;Name=PE12-1;biotype=protein_coding;transcript_id=Rv1172c Chromosome ena exon 1301755 1302681 . - . Parent=transcript:Rv1172c;Name=Rv1172c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1172c-1;rank=1 Chromosome ena CDS 1301755 1302681 . - 0 ID=CDS:Rv1172c;Parent=transcript:Rv1172c;protein_id=Rv1172c ### -Chromosome ena gene 1302931 1305501 . + . ID=gene:Rv1173;Name=fbiC;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiC;gene_id=Rv1173;logic_name=ena +Chromosome ena gene 1302931 1305501 . + . ID=gene:Rv1173;Name=fbiC;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiC;gene_id=Rv1173;logic_name=ena Chromosome ena mRNA 1302931 1305501 . + . ID=transcript:Rv1173;Parent=gene:Rv1173;Name=fbiC-1;biotype=protein_coding;transcript_id=Rv1173 Chromosome ena exon 1302931 1305501 . + . Parent=transcript:Rv1173;Name=Rv1173-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1173-1;rank=1 Chromosome ena CDS 1302931 1305501 . + 0 ID=CDS:Rv1173;Parent=transcript:Rv1173;protein_id=Rv1173 ### -Chromosome ena gene 1305669 1306001 . - . ID=gene:Rv1174c;Name=TB8.4;biotype=protein_coding;description=Low molecular weight T-cell antigen TB8.4;gene_id=Rv1174c;logic_name=ena +Chromosome ena gene 1305669 1306001 . - . ID=gene:Rv1174c;Name=TB8.4;biotype=protein_coding;description=Low molecular weight T-cell antigen TB8.4;gene_id=Rv1174c;logic_name=ena Chromosome ena mRNA 1305669 1306001 . - . ID=transcript:Rv1174c;Parent=gene:Rv1174c;Name=TB8.4-1;biotype=protein_coding;transcript_id=Rv1174c Chromosome ena exon 1305669 1306001 . - . Parent=transcript:Rv1174c;Name=Rv1174c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1174c-1;rank=1 Chromosome ena CDS 1305669 1306001 . - 0 ID=CDS:Rv1174c;Parent=transcript:Rv1174c;protein_id=Rv1174c ### -Chromosome ena gene 1306202 1308226 . - . ID=gene:Rv1175c;Name=fadH;biotype=protein_coding;description=Probable NADPH dependent 2%2C4-dienoyl-CoA reductase FadH (2%2C4-dienoyl coenzyme A reductase) (4-enoyl-CoA reductase);gene_id=Rv1175c;logic_name=ena +Chromosome ena gene 1306202 1308226 . - . ID=gene:Rv1175c;Name=fadH;biotype=protein_coding;description=Probable NADPH dependent 2%2C4-dienoyl-CoA reductase FadH (2%2C4-dienoyl coenzyme A reductase) (4-enoyl-CoA reductase);gene_id=Rv1175c;logic_name=ena Chromosome ena mRNA 1306202 1308226 . - . ID=transcript:Rv1175c;Parent=gene:Rv1175c;Name=fadH-1;biotype=protein_coding;transcript_id=Rv1175c Chromosome ena exon 1306202 1308226 . - . Parent=transcript:Rv1175c;Name=Rv1175c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1175c-1;rank=1 Chromosome ena CDS 1306202 1308226 . - 0 ID=CDS:Rv1175c;Parent=transcript:Rv1175c;protein_id=Rv1175c ### -Chromosome ena gene 1308223 1308792 . - . ID=gene:Rv1176c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1176c;logic_name=ena +Chromosome ena gene 1308223 1308792 . - . ID=gene:Rv1176c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1176c;logic_name=ena Chromosome ena mRNA 1308223 1308792 . - . ID=transcript:Rv1176c;Parent=gene:Rv1176c;biotype=protein_coding;transcript_id=Rv1176c Chromosome ena exon 1308223 1308792 . - . Parent=transcript:Rv1176c;Name=Rv1176c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1176c-1;rank=1 Chromosome ena CDS 1308223 1308792 . - 0 ID=CDS:Rv1176c;Parent=transcript:Rv1176c;protein_id=Rv1176c ### -Chromosome ena gene 1309005 1309331 . + . ID=gene:Rv1177;Name=fdxC;biotype=protein_coding;description=Probable ferredoxin FdxC;gene_id=Rv1177;logic_name=ena +Chromosome ena gene 1309005 1309331 . + . ID=gene:Rv1177;Name=fdxC;biotype=protein_coding;description=Probable ferredoxin FdxC;gene_id=Rv1177;logic_name=ena Chromosome ena mRNA 1309005 1309331 . + . ID=transcript:Rv1177;Parent=gene:Rv1177;Name=fdxC-1;biotype=protein_coding;transcript_id=Rv1177 Chromosome ena exon 1309005 1309331 . + . Parent=transcript:Rv1177;Name=Rv1177-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1177-1;rank=1 Chromosome ena CDS 1309005 1309331 . + 0 ID=CDS:Rv1177;Parent=transcript:Rv1177;protein_id=Rv1177 ### -Chromosome ena gene 1309364 1310452 . + . ID=gene:Rv1178;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv1178;logic_name=ena +Chromosome ena gene 1309364 1310452 . + . ID=gene:Rv1178;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv1178;logic_name=ena Chromosome ena mRNA 1309364 1310452 . + . ID=transcript:Rv1178;Parent=gene:Rv1178;biotype=protein_coding;transcript_id=Rv1178 Chromosome ena exon 1309364 1310452 . + . Parent=transcript:Rv1178;Name=Rv1178-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1178-1;rank=1 Chromosome ena CDS 1309364 1310452 . + 0 ID=CDS:Rv1178;Parent=transcript:Rv1178;protein_id=Rv1178 ### -Chromosome ena gene 1310480 1313299 . - . ID=gene:Rv1179c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1179c;logic_name=ena +Chromosome ena gene 1310480 1313299 . - . ID=gene:Rv1179c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1179c;logic_name=ena Chromosome ena mRNA 1310480 1313299 . - . ID=transcript:Rv1179c;Parent=gene:Rv1179c;biotype=protein_coding;transcript_id=Rv1179c Chromosome ena exon 1310480 1313299 . - . Parent=transcript:Rv1179c;Name=Rv1179c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1179c-1;rank=1 Chromosome ena CDS 1310480 1313299 . - 0 ID=CDS:Rv1179c;Parent=transcript:Rv1179c;protein_id=Rv1179c ### -Chromosome ena gene 1313725 1315191 . + . ID=gene:Rv1180;Name=pks3;biotype=protein_coding;description=Probable polyketide beta-ketoacyl synthase Pks3;gene_id=Rv1180;logic_name=ena +Chromosome ena gene 1313725 1315191 . + . ID=gene:Rv1180;Name=pks3;biotype=protein_coding;description=Probable polyketide beta-ketoacyl synthase Pks3;gene_id=Rv1180;logic_name=ena Chromosome ena mRNA 1313725 1315191 . + . ID=transcript:Rv1180;Parent=gene:Rv1180;Name=pks3-1;biotype=protein_coding;transcript_id=Rv1180 Chromosome ena exon 1313725 1315191 . + . Parent=transcript:Rv1180;Name=Rv1180-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1180-1;rank=1 Chromosome ena CDS 1313725 1315191 . + 0 ID=CDS:Rv1180;Parent=transcript:Rv1180;protein_id=Rv1180 ### -Chromosome ena gene 1315234 1319982 . + . ID=gene:Rv1181;Name=pks4;biotype=protein_coding;description=Probable polyketide beta-ketoacyl synthase Pks4;gene_id=Rv1181;logic_name=ena +Chromosome ena gene 1315234 1319982 . + . ID=gene:Rv1181;Name=pks4;biotype=protein_coding;description=Probable polyketide beta-ketoacyl synthase Pks4;gene_id=Rv1181;logic_name=ena Chromosome ena mRNA 1315234 1319982 . + . ID=transcript:Rv1181;Parent=gene:Rv1181;Name=pks4-1;biotype=protein_coding;transcript_id=Rv1181 Chromosome ena exon 1315234 1319982 . + . Parent=transcript:Rv1181;Name=Rv1181-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1181-1;rank=1 Chromosome ena CDS 1315234 1319982 . + 0 ID=CDS:Rv1181;Parent=transcript:Rv1181;protein_id=Rv1181 ### -Chromosome ena gene 1320035 1321453 . + . ID=gene:Rv1182;Name=papA3;biotype=protein_coding;description=Probable conserved polyketide synthase associated protein PapA3;gene_id=Rv1182;logic_name=ena +Chromosome ena gene 1320035 1321453 . + . ID=gene:Rv1182;Name=papA3;biotype=protein_coding;description=Probable conserved polyketide synthase associated protein PapA3;gene_id=Rv1182;logic_name=ena Chromosome ena mRNA 1320035 1321453 . + . ID=transcript:Rv1182;Parent=gene:Rv1182;Name=papA3-1;biotype=protein_coding;transcript_id=Rv1182 Chromosome ena exon 1320035 1321453 . + . Parent=transcript:Rv1182;Name=Rv1182-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1182-1;rank=1 Chromosome ena CDS 1320035 1321453 . + 0 ID=CDS:Rv1182;Parent=transcript:Rv1182;protein_id=Rv1182 ### -Chromosome ena gene 1321520 1324528 . + . ID=gene:Rv1183;Name=mmpL10;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL10;gene_id=Rv1183;logic_name=ena +Chromosome ena gene 1321520 1324528 . + . ID=gene:Rv1183;Name=mmpL10;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL10;gene_id=Rv1183;logic_name=ena Chromosome ena mRNA 1321520 1324528 . + . ID=transcript:Rv1183;Parent=gene:Rv1183;Name=mmpL10-1;biotype=protein_coding;transcript_id=Rv1183 Chromosome ena exon 1321520 1324528 . + . Parent=transcript:Rv1183;Name=Rv1183-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1183-1;rank=1 Chromosome ena CDS 1321520 1324528 . + 0 ID=CDS:Rv1183;Parent=transcript:Rv1183;protein_id=Rv1183 ### -Chromosome ena gene 1324532 1325611 . - . ID=gene:Rv1184c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1184c;logic_name=ena +Chromosome ena gene 1324532 1325611 . - . ID=gene:Rv1184c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1184c;logic_name=ena Chromosome ena mRNA 1324532 1325611 . - . ID=transcript:Rv1184c;Parent=gene:Rv1184c;biotype=protein_coding;transcript_id=Rv1184c Chromosome ena exon 1324532 1325611 . - . Parent=transcript:Rv1184c;Name=Rv1184c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1184c-1;rank=1 Chromosome ena CDS 1324532 1325611 . - 0 ID=CDS:Rv1184c;Parent=transcript:Rv1184c;protein_id=Rv1184c ### -Chromosome ena gene 1325776 1327512 . - . ID=gene:Rv1185c;Name=fadD21;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD21 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1185c;logic_name=ena +Chromosome ena gene 1325776 1327512 . - . ID=gene:Rv1185c;Name=fadD21;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD21 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1185c;logic_name=ena Chromosome ena mRNA 1325776 1327512 . - . ID=transcript:Rv1185c;Parent=gene:Rv1185c;Name=fadD21-1;biotype=protein_coding;transcript_id=Rv1185c Chromosome ena exon 1325776 1327512 . - . Parent=transcript:Rv1185c;Name=Rv1185c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1185c-1;rank=1 Chromosome ena CDS 1325776 1327512 . - 0 ID=CDS:Rv1185c;Parent=transcript:Rv1185c;protein_id=Rv1185c ### -Chromosome ena gene 1327689 1329305 . - . ID=gene:Rv1186c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1186c;logic_name=ena +Chromosome ena gene 1327689 1329305 . - . ID=gene:Rv1186c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1186c;logic_name=ena Chromosome ena mRNA 1327689 1329305 . - . ID=transcript:Rv1186c;Parent=gene:Rv1186c;biotype=protein_coding;transcript_id=Rv1186c Chromosome ena exon 1327689 1329305 . - . Parent=transcript:Rv1186c;Name=Rv1186c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1186c-1;rank=1 Chromosome ena CDS 1327689 1329305 . - 0 ID=CDS:Rv1186c;Parent=transcript:Rv1186c;protein_id=Rv1186c ### -Chromosome ena gene 1329390 1331021 . + . ID=gene:Rv1187;Name=rocA;biotype=protein_coding;description=Probable pyrroline-5-carboxylate dehydrogenase RocA;gene_id=Rv1187;logic_name=ena +Chromosome ena gene 1329390 1331021 . + . ID=gene:Rv1187;Name=rocA;biotype=protein_coding;description=Probable pyrroline-5-carboxylate dehydrogenase RocA;gene_id=Rv1187;logic_name=ena Chromosome ena mRNA 1329390 1331021 . + . ID=transcript:Rv1187;Parent=gene:Rv1187;Name=rocA-1;biotype=protein_coding;transcript_id=Rv1187 Chromosome ena exon 1329390 1331021 . + . Parent=transcript:Rv1187;Name=Rv1187-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1187-1;rank=1 Chromosome ena CDS 1329390 1331021 . + 0 ID=CDS:Rv1187;Parent=transcript:Rv1187;protein_id=Rv1187 ### -Chromosome ena gene 1331021 1332010 . + . ID=gene:Rv1188;biotype=protein_coding;description=Probable proline dehydrogenase;gene_id=Rv1188;logic_name=ena +Chromosome ena gene 1331021 1332010 . + . ID=gene:Rv1188;biotype=protein_coding;description=Probable proline dehydrogenase;gene_id=Rv1188;logic_name=ena Chromosome ena mRNA 1331021 1332010 . + . ID=transcript:Rv1188;Parent=gene:Rv1188;biotype=protein_coding;transcript_id=Rv1188 Chromosome ena exon 1331021 1332010 . + . Parent=transcript:Rv1188;Name=Rv1188-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1188-1;rank=1 Chromosome ena CDS 1331021 1332010 . + 0 ID=CDS:Rv1188;Parent=transcript:Rv1188;protein_id=Rv1188 ### -Chromosome ena gene 1332092 1332964 . + . ID=gene:Rv1189;Name=sigI;biotype=protein_coding;description=Possible alternative RNA polymerase sigma factor SigI;gene_id=Rv1189;logic_name=ena +Chromosome ena gene 1332092 1332964 . + . ID=gene:Rv1189;Name=sigI;biotype=protein_coding;description=Possible alternative RNA polymerase sigma factor SigI;gene_id=Rv1189;logic_name=ena Chromosome ena mRNA 1332092 1332964 . + . ID=transcript:Rv1189;Parent=gene:Rv1189;Name=sigI-1;biotype=protein_coding;transcript_id=Rv1189 Chromosome ena exon 1332092 1332964 . + . Parent=transcript:Rv1189;Name=Rv1189-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1189-1;rank=1 Chromosome ena CDS 1332092 1332964 . + 0 ID=CDS:Rv1189;Parent=transcript:Rv1189;protein_id=Rv1189 ### -Chromosome ena gene 1332980 1333858 . + . ID=gene:Rv1190;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1190;logic_name=ena +Chromosome ena gene 1332980 1333858 . + . ID=gene:Rv1190;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1190;logic_name=ena Chromosome ena mRNA 1332980 1333858 . + . ID=transcript:Rv1190;Parent=gene:Rv1190;biotype=protein_coding;transcript_id=Rv1190 Chromosome ena exon 1332980 1333858 . + . Parent=transcript:Rv1190;Name=Rv1190-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1190-1;rank=1 Chromosome ena CDS 1332980 1333858 . + 0 ID=CDS:Rv1190;Parent=transcript:Rv1190;protein_id=Rv1190 ### -Chromosome ena gene 1333931 1334845 . + . ID=gene:Rv1191;biotype=protein_coding;description=Conserved protein;gene_id=Rv1191;logic_name=ena +Chromosome ena gene 1333931 1334845 . + . ID=gene:Rv1191;biotype=protein_coding;description=Conserved protein;gene_id=Rv1191;logic_name=ena Chromosome ena mRNA 1333931 1334845 . + . ID=transcript:Rv1191;Parent=gene:Rv1191;biotype=protein_coding;transcript_id=Rv1191 Chromosome ena exon 1333931 1334845 . + . Parent=transcript:Rv1191;Name=Rv1191-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1191-1;rank=1 Chromosome ena CDS 1333931 1334845 . + 0 ID=CDS:Rv1191;Parent=transcript:Rv1191;protein_id=Rv1191 ### -Chromosome ena gene 1334927 1335754 . + . ID=gene:Rv1192;biotype=protein_coding;description=Unknown protein;gene_id=Rv1192;logic_name=ena +Chromosome ena gene 1334927 1335754 . + . ID=gene:Rv1192;biotype=protein_coding;description=Unknown protein;gene_id=Rv1192;logic_name=ena Chromosome ena mRNA 1334927 1335754 . + . ID=transcript:Rv1192;Parent=gene:Rv1192;biotype=protein_coding;transcript_id=Rv1192 Chromosome ena exon 1334927 1335754 . + . Parent=transcript:Rv1192;Name=Rv1192-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1192-1;rank=1 Chromosome ena CDS 1334927 1335754 . + 0 ID=CDS:Rv1192;Parent=transcript:Rv1192;protein_id=Rv1192 ### -Chromosome ena gene 1335794 1337215 . + . ID=gene:Rv1193;Name=fadD36;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD36 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1193;logic_name=ena +Chromosome ena gene 1335794 1337215 . + . ID=gene:Rv1193;Name=fadD36;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD36 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1193;logic_name=ena Chromosome ena mRNA 1335794 1337215 . + . ID=transcript:Rv1193;Parent=gene:Rv1193;Name=fadD36-1;biotype=protein_coding;transcript_id=Rv1193 Chromosome ena exon 1335794 1337215 . + . Parent=transcript:Rv1193;Name=Rv1193-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1193-1;rank=1 Chromosome ena CDS 1335794 1337215 . + 0 ID=CDS:Rv1193;Parent=transcript:Rv1193;protein_id=Rv1193 ### -Chromosome ena gene 1337248 1338513 . - . ID=gene:Rv1194c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1194c;logic_name=ena +Chromosome ena gene 1337248 1338513 . - . ID=gene:Rv1194c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1194c;logic_name=ena Chromosome ena mRNA 1337248 1338513 . - . ID=transcript:Rv1194c;Parent=gene:Rv1194c;biotype=protein_coding;transcript_id=Rv1194c Chromosome ena exon 1337248 1338513 . - . Parent=transcript:Rv1194c;Name=Rv1194c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1194c-1;rank=1 Chromosome ena CDS 1337248 1338513 . - 0 ID=CDS:Rv1194c;Parent=transcript:Rv1194c;protein_id=Rv1194c ### -Chromosome ena gene 1339003 1339302 . + . ID=gene:Rv1195;Name=PE13;biotype=protein_coding;description=PE family protein PE13;gene_id=Rv1195;logic_name=ena +Chromosome ena gene 1339003 1339302 . + . ID=gene:Rv1195;Name=PE13;biotype=protein_coding;description=PE family protein PE13;gene_id=Rv1195;logic_name=ena Chromosome ena mRNA 1339003 1339302 . + . ID=transcript:Rv1195;Parent=gene:Rv1195;Name=PE13-1;biotype=protein_coding;transcript_id=Rv1195 Chromosome ena exon 1339003 1339302 . + . Parent=transcript:Rv1195;Name=Rv1195-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1195-1;rank=1 Chromosome ena CDS 1339003 1339302 . + 0 ID=CDS:Rv1195;Parent=transcript:Rv1195;protein_id=Rv1195 ### -Chromosome ena gene 1339349 1340524 . + . ID=gene:Rv1196;Name=PPE18;biotype=protein_coding;description=PPE family protein PPE18;gene_id=Rv1196;logic_name=ena +Chromosome ena gene 1339349 1340524 . + . ID=gene:Rv1196;Name=PPE18;biotype=protein_coding;description=PPE family protein PPE18;gene_id=Rv1196;logic_name=ena Chromosome ena mRNA 1339349 1340524 . + . ID=transcript:Rv1196;Parent=gene:Rv1196;Name=PPE18-1;biotype=protein_coding;transcript_id=Rv1196 Chromosome ena exon 1339349 1340524 . + . Parent=transcript:Rv1196;Name=Rv1196-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1196-1;rank=1 Chromosome ena CDS 1339349 1340524 . + 0 ID=CDS:Rv1196;Parent=transcript:Rv1196;protein_id=Rv1196 @@ -6291,128 +6291,128 @@ Chromosome ena transcript 1340578 1340625 . + . ID=transcript:EBG00000313387;Par Chromosome ena exon 1340578 1340625 . + . Parent=transcript:EBG00000313387;Name=EBG00000313387;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313387;rank=1 ### Chromosome ena_gene biological_region 1340578 1340625 . + . external_name=AL123456.3:gene:1340578..1340625;logic_name=ena_gene -Chromosome ena gene 1340659 1340955 . + . ID=gene:Rv1197;Name=esxK;biotype=protein_coding;description=ESAT-6 like protein EsxK (ESAT-6 like protein 3);gene_id=Rv1197;logic_name=ena +Chromosome ena gene 1340659 1340955 . + . ID=gene:Rv1197;Name=esxK;biotype=protein_coding;description=ESAT-6 like protein EsxK (ESAT-6 like protein 3);gene_id=Rv1197;logic_name=ena Chromosome ena mRNA 1340659 1340955 . + . ID=transcript:Rv1197;Parent=gene:Rv1197;Name=esxK-1;biotype=protein_coding;transcript_id=Rv1197 Chromosome ena exon 1340659 1340955 . + . Parent=transcript:Rv1197;Name=Rv1197-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1197-1;rank=1 Chromosome ena CDS 1340659 1340955 . + 0 ID=CDS:Rv1197;Parent=transcript:Rv1197;protein_id=Rv1197 ### -Chromosome ena gene 1341006 1341290 . + . ID=gene:Rv1198;Name=esxL;biotype=protein_coding;description=Putative ESAT-6 like protein EsxL (ESAT-6 like protein 4);gene_id=Rv1198;logic_name=ena +Chromosome ena gene 1341006 1341290 . + . ID=gene:Rv1198;Name=esxL;biotype=protein_coding;description=Putative ESAT-6 like protein EsxL (ESAT-6 like protein 4);gene_id=Rv1198;logic_name=ena Chromosome ena mRNA 1341006 1341290 . + . ID=transcript:Rv1198;Parent=gene:Rv1198;Name=esxL-1;biotype=protein_coding;transcript_id=Rv1198 Chromosome ena exon 1341006 1341290 . + . Parent=transcript:Rv1198;Name=Rv1198-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1198-1;rank=1 Chromosome ena CDS 1341006 1341290 . + 0 ID=CDS:Rv1198;Parent=transcript:Rv1198;protein_id=Rv1198 ### -Chromosome ena gene 1341358 1342605 . - . ID=gene:Rv1199c;biotype=protein_coding;description=Possible transposase;gene_id=Rv1199c;logic_name=ena +Chromosome ena gene 1341358 1342605 . - . ID=gene:Rv1199c;biotype=protein_coding;description=Possible transposase;gene_id=Rv1199c;logic_name=ena Chromosome ena mRNA 1341358 1342605 . - . ID=transcript:Rv1199c;Parent=gene:Rv1199c;biotype=protein_coding;transcript_id=Rv1199c Chromosome ena exon 1341358 1342605 . - . Parent=transcript:Rv1199c;Name=Rv1199c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1199c-1;rank=1 Chromosome ena CDS 1341358 1342605 . - 0 ID=CDS:Rv1199c;Parent=transcript:Rv1199c;protein_id=Rv1199c ### -Chromosome ena_mobile_element biological_region 1341361 1342789 . - . external_name=IS1081-2%2C len: 1429 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element -Chromosome ena gene 1342942 1344219 . + . ID=gene:Rv1200;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1200;logic_name=ena +Chromosome ena_mobile_element biological_region 1341361 1342789 . - . external_name=IS1081-2%2C len: 1429 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element +Chromosome ena gene 1342942 1344219 . + . ID=gene:Rv1200;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1200;logic_name=ena Chromosome ena mRNA 1342942 1344219 . + . ID=transcript:Rv1200;Parent=gene:Rv1200;biotype=protein_coding;transcript_id=Rv1200 Chromosome ena exon 1342942 1344219 . + . Parent=transcript:Rv1200;Name=Rv1200-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1200-1;rank=1 Chromosome ena CDS 1342942 1344219 . + 0 ID=CDS:Rv1200;Parent=transcript:Rv1200;protein_id=Rv1200 ### -Chromosome ena gene 1344216 1345169 . - . ID=gene:Rv1201c;Name=dapD;biotype=protein_coding;description=Tetrahydrodipicolinate N-succinyltransferase DapD;gene_id=Rv1201c;logic_name=ena +Chromosome ena gene 1344216 1345169 . - . ID=gene:Rv1201c;Name=dapD;biotype=protein_coding;description=Tetrahydrodipicolinate N-succinyltransferase DapD;gene_id=Rv1201c;logic_name=ena Chromosome ena mRNA 1344216 1345169 . - . ID=transcript:Rv1201c;Parent=gene:Rv1201c;Name=dapD-1;biotype=protein_coding;transcript_id=Rv1201c Chromosome ena exon 1344216 1345169 . - . Parent=transcript:Rv1201c;Name=Rv1201c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1201c-1;rank=1 Chromosome ena CDS 1344216 1345169 . - 0 ID=CDS:Rv1201c;Parent=transcript:Rv1201c;protein_id=Rv1201c ### -Chromosome ena gene 1345260 1346324 . + . ID=gene:Rv1202;Name=dapE;biotype=protein_coding;description=Probable succinyl-diaminopimelate desuccinylase DapE;gene_id=Rv1202;logic_name=ena +Chromosome ena gene 1345260 1346324 . + . ID=gene:Rv1202;Name=dapE;biotype=protein_coding;description=Probable succinyl-diaminopimelate desuccinylase DapE;gene_id=Rv1202;logic_name=ena Chromosome ena mRNA 1345260 1346324 . + . ID=transcript:Rv1202;Parent=gene:Rv1202;Name=dapE-1;biotype=protein_coding;transcript_id=Rv1202 Chromosome ena exon 1345260 1346324 . + . Parent=transcript:Rv1202;Name=Rv1202-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1202-1;rank=1 Chromosome ena CDS 1345260 1346324 . + 0 ID=CDS:Rv1202;Parent=transcript:Rv1202;protein_id=Rv1202 ### -Chromosome ena gene 1346321 1346905 . - . ID=gene:Rv1203c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1203c;logic_name=ena +Chromosome ena gene 1346321 1346905 . - . ID=gene:Rv1203c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1203c;logic_name=ena Chromosome ena mRNA 1346321 1346905 . - . ID=transcript:Rv1203c;Parent=gene:Rv1203c;biotype=protein_coding;transcript_id=Rv1203c Chromosome ena exon 1346321 1346905 . - . Parent=transcript:Rv1203c;Name=Rv1203c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1203c-1;rank=1 Chromosome ena CDS 1346321 1346905 . - 0 ID=CDS:Rv1203c;Parent=transcript:Rv1203c;protein_id=Rv1203c ### -Chromosome ena gene 1346936 1348624 . - . ID=gene:Rv1204c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1204c;logic_name=ena +Chromosome ena gene 1346936 1348624 . - . ID=gene:Rv1204c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1204c;logic_name=ena Chromosome ena mRNA 1346936 1348624 . - . ID=transcript:Rv1204c;Parent=gene:Rv1204c;biotype=protein_coding;transcript_id=Rv1204c Chromosome ena exon 1346936 1348624 . - . Parent=transcript:Rv1204c;Name=Rv1204c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1204c-1;rank=1 Chromosome ena CDS 1346936 1348624 . - 0 ID=CDS:Rv1204c;Parent=transcript:Rv1204c;protein_id=Rv1204c ### -Chromosome ena gene 1348719 1349282 . + . ID=gene:Rv1205;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1205;logic_name=ena +Chromosome ena gene 1348719 1349282 . + . ID=gene:Rv1205;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1205;logic_name=ena Chromosome ena mRNA 1348719 1349282 . + . ID=transcript:Rv1205;Parent=gene:Rv1205;biotype=protein_coding;transcript_id=Rv1205 Chromosome ena exon 1348719 1349282 . + . Parent=transcript:Rv1205;Name=Rv1205-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1205-1;rank=1 Chromosome ena CDS 1348719 1349282 . + 0 ID=CDS:Rv1205;Parent=transcript:Rv1205;protein_id=Rv1205 ### -Chromosome ena gene 1349332 1351125 . + . ID=gene:Rv1206;Name=fadD6;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD6 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1206;logic_name=ena +Chromosome ena gene 1349332 1351125 . + . ID=gene:Rv1206;Name=fadD6;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD6 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1206;logic_name=ena Chromosome ena mRNA 1349332 1351125 . + . ID=transcript:Rv1206;Parent=gene:Rv1206;Name=fadD6-1;biotype=protein_coding;transcript_id=Rv1206 Chromosome ena exon 1349332 1351125 . + . Parent=transcript:Rv1206;Name=Rv1206-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1206-1;rank=1 Chromosome ena CDS 1349332 1351125 . + 0 ID=CDS:Rv1206;Parent=transcript:Rv1206;protein_id=Rv1206 ### -Chromosome ena gene 1351191 1352147 . + . ID=gene:Rv1207;Name=folP2;biotype=protein_coding;description=Dihydropteroate synthase 2 FolP2 (DHPS 2) (dihydropteroate pyrophosphorylase 2);gene_id=Rv1207;logic_name=ena +Chromosome ena gene 1351191 1352147 . + . ID=gene:Rv1207;Name=folP2;biotype=protein_coding;description=Dihydropteroate synthase 2 FolP2 (DHPS 2) (dihydropteroate pyrophosphorylase 2);gene_id=Rv1207;logic_name=ena Chromosome ena mRNA 1351191 1352147 . + . ID=transcript:Rv1207;Parent=gene:Rv1207;Name=folP2-1;biotype=protein_coding;transcript_id=Rv1207 Chromosome ena exon 1351191 1352147 . + . Parent=transcript:Rv1207;Name=Rv1207-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1207-1;rank=1 Chromosome ena CDS 1351191 1352147 . + 0 ID=CDS:Rv1207;Parent=transcript:Rv1207;protein_id=Rv1207 ### -Chromosome ena gene 1352144 1353118 . + . ID=gene:Rv1208;Name=gpgS;biotype=protein_coding;description=Probable glucosyl-3-phosphoglycerate synthase GpgS;gene_id=Rv1208;logic_name=ena +Chromosome ena gene 1352144 1353118 . + . ID=gene:Rv1208;Name=gpgS;biotype=protein_coding;description=Probable glucosyl-3-phosphoglycerate synthase GpgS;gene_id=Rv1208;logic_name=ena Chromosome ena mRNA 1352144 1353118 . + . ID=transcript:Rv1208;Parent=gene:Rv1208;Name=gpgS-1;biotype=protein_coding;transcript_id=Rv1208 Chromosome ena exon 1352144 1353118 . + . Parent=transcript:Rv1208;Name=Rv1208-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1208-1;rank=1 Chromosome ena CDS 1352144 1353118 . + 0 ID=CDS:Rv1208;Parent=transcript:Rv1208;protein_id=Rv1208 ### -Chromosome ena gene 1353157 1353525 . + . ID=gene:Rv1209;biotype=protein_coding;description=Conserved protein;gene_id=Rv1209;logic_name=ena +Chromosome ena gene 1353157 1353525 . + . ID=gene:Rv1209;biotype=protein_coding;description=Conserved protein;gene_id=Rv1209;logic_name=ena Chromosome ena mRNA 1353157 1353525 . + . ID=transcript:Rv1209;Parent=gene:Rv1209;biotype=protein_coding;transcript_id=Rv1209 Chromosome ena exon 1353157 1353525 . + . Parent=transcript:Rv1209;Name=Rv1209-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1209-1;rank=1 Chromosome ena CDS 1353157 1353525 . + 0 ID=CDS:Rv1209;Parent=transcript:Rv1209;protein_id=Rv1209 ### -Chromosome ena gene 1353522 1354136 . + . ID=gene:Rv1210;Name=tagA;biotype=protein_coding;description=Probable DNA-3-methyladenine glycosylase I TagA (tag I) (3-methyladenine-DNA glycosylase I%2C constitutive) (DNA-3-methyladenine glycosidase I);gene_id=Rv1210;logic_name=ena +Chromosome ena gene 1353522 1354136 . + . ID=gene:Rv1210;Name=tagA;biotype=protein_coding;description=Probable DNA-3-methyladenine glycosylase I TagA (tag I) (3-methyladenine-DNA glycosylase I%2C constitutive) (DNA-3-methyladenine glycosidase I);gene_id=Rv1210;logic_name=ena Chromosome ena mRNA 1353522 1354136 . + . ID=transcript:Rv1210;Parent=gene:Rv1210;Name=tagA-1;biotype=protein_coding;transcript_id=Rv1210 Chromosome ena exon 1353522 1354136 . + . Parent=transcript:Rv1210;Name=Rv1210-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1210-1;rank=1 Chromosome ena CDS 1353522 1354136 . + 0 ID=CDS:Rv1210;Parent=transcript:Rv1210;protein_id=Rv1210 ### -Chromosome ena gene 1354243 1354470 . + . ID=gene:Rv1211;biotype=protein_coding;description=Conserved protein;gene_id=Rv1211;logic_name=ena +Chromosome ena gene 1354243 1354470 . + . ID=gene:Rv1211;biotype=protein_coding;description=Conserved protein;gene_id=Rv1211;logic_name=ena Chromosome ena mRNA 1354243 1354470 . + . ID=transcript:Rv1211;Parent=gene:Rv1211;biotype=protein_coding;transcript_id=Rv1211 Chromosome ena exon 1354243 1354470 . + . Parent=transcript:Rv1211;Name=Rv1211-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1211-1;rank=1 Chromosome ena CDS 1354243 1354470 . + 0 ID=CDS:Rv1211;Parent=transcript:Rv1211;protein_id=Rv1211 ### -Chromosome ena gene 1354498 1355661 . - . ID=gene:Rv1212c;Name=glgA;biotype=protein_coding;description=Putative glycosyl transferase GlgA;gene_id=Rv1212c;logic_name=ena +Chromosome ena gene 1354498 1355661 . - . ID=gene:Rv1212c;Name=glgA;biotype=protein_coding;description=Putative glycosyl transferase GlgA;gene_id=Rv1212c;logic_name=ena Chromosome ena mRNA 1354498 1355661 . - . ID=transcript:Rv1212c;Parent=gene:Rv1212c;Name=glgA-1;biotype=protein_coding;transcript_id=Rv1212c Chromosome ena exon 1354498 1355661 . - . Parent=transcript:Rv1212c;Name=Rv1212c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1212c-1;rank=1 Chromosome ena CDS 1354498 1355661 . - 0 ID=CDS:Rv1212c;Parent=transcript:Rv1212c;protein_id=Rv1212c ### -Chromosome ena gene 1355836 1357050 . + . ID=gene:Rv1213;Name=glgC;biotype=protein_coding;description=Glucose-1-phosphate adenylyltransferase GlgC (ADP-glucose synthase) (ADP-glucose pyrophosphorylase);gene_id=Rv1213;logic_name=ena +Chromosome ena gene 1355836 1357050 . + . ID=gene:Rv1213;Name=glgC;biotype=protein_coding;description=Glucose-1-phosphate adenylyltransferase GlgC (ADP-glucose synthase) (ADP-glucose pyrophosphorylase);gene_id=Rv1213;logic_name=ena Chromosome ena mRNA 1355836 1357050 . + . ID=transcript:Rv1213;Parent=gene:Rv1213;Name=glgC-1;biotype=protein_coding;transcript_id=Rv1213 Chromosome ena exon 1355836 1357050 . + . Parent=transcript:Rv1213;Name=Rv1213-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1213-1;rank=1 Chromosome ena CDS 1355836 1357050 . + 0 ID=CDS:Rv1213;Parent=transcript:Rv1213;protein_id=Rv1213 ### -Chromosome ena gene 1357293 1357625 . - . ID=gene:Rv1214c;Name=PE14;biotype=protein_coding;description=PE family protein PE14;gene_id=Rv1214c;logic_name=ena +Chromosome ena gene 1357293 1357625 . - . ID=gene:Rv1214c;Name=PE14;biotype=protein_coding;description=PE family protein PE14;gene_id=Rv1214c;logic_name=ena Chromosome ena mRNA 1357293 1357625 . - . ID=transcript:Rv1214c;Parent=gene:Rv1214c;Name=PE14-1;biotype=protein_coding;transcript_id=Rv1214c Chromosome ena exon 1357293 1357625 . - . Parent=transcript:Rv1214c;Name=Rv1214c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1214c-1;rank=1 Chromosome ena CDS 1357293 1357625 . - 0 ID=CDS:Rv1214c;Parent=transcript:Rv1214c;protein_id=Rv1214c ### -Chromosome ena gene 1357759 1359444 . - . ID=gene:Rv1215c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1215c;logic_name=ena +Chromosome ena gene 1357759 1359444 . - . ID=gene:Rv1215c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1215c;logic_name=ena Chromosome ena mRNA 1357759 1359444 . - . ID=transcript:Rv1215c;Parent=gene:Rv1215c;biotype=protein_coding;transcript_id=Rv1215c Chromosome ena exon 1357759 1359444 . - . Parent=transcript:Rv1215c;Name=Rv1215c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1215c-1;rank=1 Chromosome ena CDS 1357759 1359444 . - 0 ID=CDS:Rv1215c;Parent=transcript:Rv1215c;protein_id=Rv1215c ### -Chromosome ena gene 1359472 1360146 . - . ID=gene:Rv1216c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1216c;logic_name=ena +Chromosome ena gene 1359472 1360146 . - . ID=gene:Rv1216c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1216c;logic_name=ena Chromosome ena mRNA 1359472 1360146 . - . ID=transcript:Rv1216c;Parent=gene:Rv1216c;biotype=protein_coding;transcript_id=Rv1216c Chromosome ena exon 1359472 1360146 . - . Parent=transcript:Rv1216c;Name=Rv1216c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1216c-1;rank=1 Chromosome ena CDS 1359472 1360146 . - 0 ID=CDS:Rv1216c;Parent=transcript:Rv1216c;protein_id=Rv1216c ### -Chromosome ena gene 1360155 1361801 . - . ID=gene:Rv1217c;biotype=protein_coding;description=Probable tetronasin-transport integral membrane protein ABC transporter;gene_id=Rv1217c;logic_name=ena +Chromosome ena gene 1360155 1361801 . - . ID=gene:Rv1217c;biotype=protein_coding;description=Probable tetronasin-transport integral membrane protein ABC transporter;gene_id=Rv1217c;logic_name=ena Chromosome ena mRNA 1360155 1361801 . - . ID=transcript:Rv1217c;Parent=gene:Rv1217c;biotype=protein_coding;transcript_id=Rv1217c Chromosome ena exon 1360155 1361801 . - . Parent=transcript:Rv1217c;Name=Rv1217c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1217c-1;rank=1 Chromosome ena CDS 1360155 1361801 . - 0 ID=CDS:Rv1217c;Parent=transcript:Rv1217c;protein_id=Rv1217c ### -Chromosome ena gene 1361798 1362733 . - . ID=gene:Rv1218c;biotype=protein_coding;description=Probable tetronasin-transport ATP-binding protein ABC transporter;gene_id=Rv1218c;logic_name=ena +Chromosome ena gene 1361798 1362733 . - . ID=gene:Rv1218c;biotype=protein_coding;description=Probable tetronasin-transport ATP-binding protein ABC transporter;gene_id=Rv1218c;logic_name=ena Chromosome ena mRNA 1361798 1362733 . - . ID=transcript:Rv1218c;Parent=gene:Rv1218c;biotype=protein_coding;transcript_id=Rv1218c Chromosome ena exon 1361798 1362733 . - . Parent=transcript:Rv1218c;Name=Rv1218c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1218c-1;rank=1 Chromosome ena CDS 1361798 1362733 . - 0 ID=CDS:Rv1218c;Parent=transcript:Rv1218c;protein_id=Rv1218c ### -Chromosome ena gene 1362723 1363361 . - . ID=gene:Rv1219c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1219c;logic_name=ena +Chromosome ena gene 1362723 1363361 . - . ID=gene:Rv1219c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1219c;logic_name=ena Chromosome ena mRNA 1362723 1363361 . - . ID=transcript:Rv1219c;Parent=gene:Rv1219c;biotype=protein_coding;transcript_id=Rv1219c Chromosome ena exon 1362723 1363361 . - . Parent=transcript:Rv1219c;Name=Rv1219c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1219c-1;rank=1 Chromosome ena CDS 1362723 1363361 . - 0 ID=CDS:Rv1219c;Parent=transcript:Rv1219c;protein_id=Rv1219c ### -Chromosome ena gene 1363503 1364150 . - . ID=gene:Rv1220c;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1220c;logic_name=ena +Chromosome ena gene 1363503 1364150 . - . ID=gene:Rv1220c;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1220c;logic_name=ena Chromosome ena mRNA 1363503 1364150 . - . ID=transcript:Rv1220c;Parent=gene:Rv1220c;biotype=protein_coding;transcript_id=Rv1220c Chromosome ena exon 1363503 1364150 . - . Parent=transcript:Rv1220c;Name=Rv1220c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1220c-1;rank=1 Chromosome ena CDS 1363503 1364150 . - 0 ID=CDS:Rv1220c;Parent=transcript:Rv1220c;protein_id=Rv1220c ### -Chromosome ena gene 1364413 1365186 . + . ID=gene:Rv1221;Name=sigE;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigE;gene_id=Rv1221;logic_name=ena +Chromosome ena gene 1364413 1365186 . + . ID=gene:Rv1221;Name=sigE;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigE;gene_id=Rv1221;logic_name=ena Chromosome ena mRNA 1364413 1365186 . + . ID=transcript:Rv1221;Parent=gene:Rv1221;Name=sigE-1;biotype=protein_coding;transcript_id=Rv1221 Chromosome ena exon 1364413 1365186 . + . Parent=transcript:Rv1221;Name=Rv1221-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1221-1;rank=1 Chromosome ena CDS 1364413 1365186 . + 0 ID=CDS:Rv1221;Parent=transcript:Rv1221;protein_id=Rv1221 @@ -6422,217 +6422,217 @@ Chromosome ena transcript 1365274 1365365 . + . ID=transcript:EBG00000313390;Par Chromosome ena exon 1365274 1365365 . + . Parent=transcript:EBG00000313390;Name=EBG00000313390;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313390;rank=1 ### Chromosome ena_gene biological_region 1365274 1365365 . + . external_name=AL123456.3:gene:1365274..1365365;logic_name=ena_gene -Chromosome ena gene 1365344 1365808 . + . ID=gene:Rv1222;Name=rseA;biotype=protein_coding;description=Anti-sigma factor RseA;gene_id=Rv1222;logic_name=ena +Chromosome ena gene 1365344 1365808 . + . ID=gene:Rv1222;Name=rseA;biotype=protein_coding;description=Anti-sigma factor RseA;gene_id=Rv1222;logic_name=ena Chromosome ena mRNA 1365344 1365808 . + . ID=transcript:Rv1222;Parent=gene:Rv1222;Name=rseA-1;biotype=protein_coding;transcript_id=Rv1222 Chromosome ena exon 1365344 1365808 . + . Parent=transcript:Rv1222;Name=Rv1222-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1222-1;rank=1 Chromosome ena CDS 1365344 1365808 . + 0 ID=CDS:Rv1222;Parent=transcript:Rv1222;protein_id=Rv1222 ### -Chromosome ena gene 1365875 1367461 . + . ID=gene:Rv1223;Name=htrA;biotype=protein_coding;description=Probable serine protease HtrA (DEGP protein);gene_id=Rv1223;logic_name=ena +Chromosome ena gene 1365875 1367461 . + . ID=gene:Rv1223;Name=htrA;biotype=protein_coding;description=Probable serine protease HtrA (DEGP protein);gene_id=Rv1223;logic_name=ena Chromosome ena mRNA 1365875 1367461 . + . ID=transcript:Rv1223;Parent=gene:Rv1223;Name=htrA-1;biotype=protein_coding;transcript_id=Rv1223 Chromosome ena exon 1365875 1367461 . + . Parent=transcript:Rv1223;Name=Rv1223-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1223-1;rank=1 Chromosome ena CDS 1365875 1367461 . + 0 ID=CDS:Rv1223;Parent=transcript:Rv1223;protein_id=Rv1223 ### -Chromosome ena gene 1367463 1367858 . + . ID=gene:Rv1224;Name=tatB;biotype=protein_coding;description=Probable protein TatB;gene_id=Rv1224;logic_name=ena +Chromosome ena gene 1367463 1367858 . + . ID=gene:Rv1224;Name=tatB;biotype=protein_coding;description=Probable protein TatB;gene_id=Rv1224;logic_name=ena Chromosome ena mRNA 1367463 1367858 . + . ID=transcript:Rv1224;Parent=gene:Rv1224;Name=tatB-1;biotype=protein_coding;transcript_id=Rv1224 Chromosome ena exon 1367463 1367858 . + . Parent=transcript:Rv1224;Name=Rv1224-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1224-1;rank=1 Chromosome ena CDS 1367463 1367858 . + 0 ID=CDS:Rv1224;Parent=transcript:Rv1224;protein_id=Rv1224 ### -Chromosome ena gene 1367891 1368721 . - . ID=gene:Rv1225c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1225c;logic_name=ena +Chromosome ena gene 1367891 1368721 . - . ID=gene:Rv1225c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1225c;logic_name=ena Chromosome ena mRNA 1367891 1368721 . - . ID=transcript:Rv1225c;Parent=gene:Rv1225c;biotype=protein_coding;transcript_id=Rv1225c Chromosome ena exon 1367891 1368721 . - . Parent=transcript:Rv1225c;Name=Rv1225c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1225c-1;rank=1 Chromosome ena CDS 1367891 1368721 . - 0 ID=CDS:Rv1225c;Parent=transcript:Rv1225c;protein_id=Rv1225c ### -Chromosome ena gene 1368832 1370295 . - . ID=gene:Rv1226c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1226c;logic_name=ena +Chromosome ena gene 1368832 1370295 . - . ID=gene:Rv1226c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1226c;logic_name=ena Chromosome ena mRNA 1368832 1370295 . - . ID=transcript:Rv1226c;Parent=gene:Rv1226c;biotype=protein_coding;transcript_id=Rv1226c Chromosome ena exon 1368832 1370295 . - . Parent=transcript:Rv1226c;Name=Rv1226c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1226c-1;rank=1 Chromosome ena CDS 1368832 1370295 . - 0 ID=CDS:Rv1226c;Parent=transcript:Rv1226c;protein_id=Rv1226c ### -Chromosome ena gene 1370292 1370825 . - . ID=gene:Rv1227c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1227c;logic_name=ena +Chromosome ena gene 1370292 1370825 . - . ID=gene:Rv1227c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1227c;logic_name=ena Chromosome ena mRNA 1370292 1370825 . - . ID=transcript:Rv1227c;Parent=gene:Rv1227c;biotype=protein_coding;transcript_id=Rv1227c Chromosome ena exon 1370292 1370825 . - . Parent=transcript:Rv1227c;Name=Rv1227c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1227c-1;rank=1 Chromosome ena CDS 1370292 1370825 . - 0 ID=CDS:Rv1227c;Parent=transcript:Rv1227c;protein_id=Rv1227c ### -Chromosome ena gene 1370920 1371477 . + . ID=gene:Rv1228;Name=lpqX;biotype=protein_coding;description=Probable lipoprotein LpqX;gene_id=Rv1228;logic_name=ena +Chromosome ena gene 1370920 1371477 . + . ID=gene:Rv1228;Name=lpqX;biotype=protein_coding;description=Probable lipoprotein LpqX;gene_id=Rv1228;logic_name=ena Chromosome ena mRNA 1370920 1371477 . + . ID=transcript:Rv1228;Parent=gene:Rv1228;Name=lpqX-1;biotype=protein_coding;transcript_id=Rv1228 Chromosome ena exon 1370920 1371477 . + . Parent=transcript:Rv1228;Name=Rv1228-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1228-1;rank=1 Chromosome ena CDS 1370920 1371477 . + 0 ID=CDS:Rv1228;Parent=transcript:Rv1228;protein_id=Rv1228 ### -Chromosome ena gene 1371777 1372949 . - . ID=gene:Rv1229c;Name=mrp;biotype=protein_coding;description=Probable Mrp-related protein Mrp;gene_id=Rv1229c;logic_name=ena +Chromosome ena gene 1371777 1372949 . - . ID=gene:Rv1229c;Name=mrp;biotype=protein_coding;description=Probable Mrp-related protein Mrp;gene_id=Rv1229c;logic_name=ena Chromosome ena mRNA 1371777 1372949 . - . ID=transcript:Rv1229c;Parent=gene:Rv1229c;Name=mrp-1;biotype=protein_coding;transcript_id=Rv1229c Chromosome ena exon 1371777 1372949 . - . Parent=transcript:Rv1229c;Name=Rv1229c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1229c-1;rank=1 Chromosome ena CDS 1371777 1372949 . - 0 ID=CDS:Rv1229c;Parent=transcript:Rv1229c;protein_id=Rv1229c ### -Chromosome ena gene 1372962 1374197 . - . ID=gene:Rv1230c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1230c;logic_name=ena +Chromosome ena gene 1372962 1374197 . - . ID=gene:Rv1230c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1230c;logic_name=ena Chromosome ena mRNA 1372962 1374197 . - . ID=transcript:Rv1230c;Parent=gene:Rv1230c;biotype=protein_coding;transcript_id=Rv1230c Chromosome ena exon 1372962 1374197 . - . Parent=transcript:Rv1230c;Name=Rv1230c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1230c-1;rank=1 Chromosome ena CDS 1372962 1374197 . - 0 ID=CDS:Rv1230c;Parent=transcript:Rv1230c;protein_id=Rv1230c ### -Chromosome ena gene 1374322 1374864 . - . ID=gene:Rv1231c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1231c;logic_name=ena +Chromosome ena gene 1374322 1374864 . - . ID=gene:Rv1231c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1231c;logic_name=ena Chromosome ena mRNA 1374322 1374864 . - . ID=transcript:Rv1231c;Parent=gene:Rv1231c;biotype=protein_coding;transcript_id=Rv1231c Chromosome ena exon 1374322 1374864 . - . Parent=transcript:Rv1231c;Name=Rv1231c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1231c-1;rank=1 Chromosome ena CDS 1374322 1374864 . - 0 ID=CDS:Rv1231c;Parent=transcript:Rv1231c;protein_id=Rv1231c ### -Chromosome ena gene 1374861 1376168 . - . ID=gene:Rv1232c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1232c;logic_name=ena +Chromosome ena gene 1374861 1376168 . - . ID=gene:Rv1232c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1232c;logic_name=ena Chromosome ena mRNA 1374861 1376168 . - . ID=transcript:Rv1232c;Parent=gene:Rv1232c;biotype=protein_coding;transcript_id=Rv1232c Chromosome ena exon 1374861 1376168 . - . Parent=transcript:Rv1232c;Name=Rv1232c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1232c-1;rank=1 Chromosome ena CDS 1374861 1376168 . - 0 ID=CDS:Rv1232c;Parent=transcript:Rv1232c;protein_id=Rv1232c ### -Chromosome ena gene 1376230 1376826 . - . ID=gene:Rv1233c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1233c;logic_name=ena +Chromosome ena gene 1376230 1376826 . - . ID=gene:Rv1233c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1233c;logic_name=ena Chromosome ena mRNA 1376230 1376826 . - . ID=transcript:Rv1233c;Parent=gene:Rv1233c;biotype=protein_coding;transcript_id=Rv1233c Chromosome ena exon 1376230 1376826 . - . Parent=transcript:Rv1233c;Name=Rv1233c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1233c-1;rank=1 Chromosome ena CDS 1376230 1376826 . - 0 ID=CDS:Rv1233c;Parent=transcript:Rv1233c;protein_id=Rv1233c ### -Chromosome ena gene 1376976 1377503 . + . ID=gene:Rv1234;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1234;logic_name=ena +Chromosome ena gene 1376976 1377503 . + . ID=gene:Rv1234;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1234;logic_name=ena Chromosome ena mRNA 1376976 1377503 . + . ID=transcript:Rv1234;Parent=gene:Rv1234;biotype=protein_coding;transcript_id=Rv1234 Chromosome ena exon 1376976 1377503 . + . Parent=transcript:Rv1234;Name=Rv1234-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1234-1;rank=1 Chromosome ena CDS 1376976 1377503 . + 0 ID=CDS:Rv1234;Parent=transcript:Rv1234;protein_id=Rv1234 ### -Chromosome ena gene 1377524 1378930 . + . ID=gene:Rv1235;Name=lpqY;biotype=protein_coding;description=Probable sugar-binding lipoprotein LpqY;gene_id=Rv1235;logic_name=ena +Chromosome ena gene 1377524 1378930 . + . ID=gene:Rv1235;Name=lpqY;biotype=protein_coding;description=Probable sugar-binding lipoprotein LpqY;gene_id=Rv1235;logic_name=ena Chromosome ena mRNA 1377524 1378930 . + . ID=transcript:Rv1235;Parent=gene:Rv1235;Name=lpqY-1;biotype=protein_coding;transcript_id=Rv1235 Chromosome ena exon 1377524 1378930 . + . Parent=transcript:Rv1235;Name=Rv1235-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1235-1;rank=1 Chromosome ena CDS 1377524 1378930 . + 0 ID=CDS:Rv1235;Parent=transcript:Rv1235;protein_id=Rv1235 ### -Chromosome ena gene 1378927 1379850 . + . ID=gene:Rv1236;Name=sugA;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter SugA;gene_id=Rv1236;logic_name=ena +Chromosome ena gene 1378927 1379850 . + . ID=gene:Rv1236;Name=sugA;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter SugA;gene_id=Rv1236;logic_name=ena Chromosome ena mRNA 1378927 1379850 . + . ID=transcript:Rv1236;Parent=gene:Rv1236;Name=sugA-1;biotype=protein_coding;transcript_id=Rv1236 Chromosome ena exon 1378927 1379850 . + . Parent=transcript:Rv1236;Name=Rv1236-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1236-1;rank=1 Chromosome ena CDS 1378927 1379850 . + 0 ID=CDS:Rv1236;Parent=transcript:Rv1236;protein_id=Rv1236 ### -Chromosome ena gene 1379855 1380679 . + . ID=gene:Rv1237;Name=sugB;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter SugB;gene_id=Rv1237;logic_name=ena +Chromosome ena gene 1379855 1380679 . + . ID=gene:Rv1237;Name=sugB;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter SugB;gene_id=Rv1237;logic_name=ena Chromosome ena mRNA 1379855 1380679 . + . ID=transcript:Rv1237;Parent=gene:Rv1237;Name=sugB-1;biotype=protein_coding;transcript_id=Rv1237 Chromosome ena exon 1379855 1380679 . + . Parent=transcript:Rv1237;Name=Rv1237-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1237-1;rank=1 Chromosome ena CDS 1379855 1380679 . + 0 ID=CDS:Rv1237;Parent=transcript:Rv1237;protein_id=Rv1237 ### -Chromosome ena gene 1380684 1381865 . + . ID=gene:Rv1238;Name=sugC;biotype=protein_coding;description=Probable sugar-transport ATP-binding protein ABC transporter SugC;gene_id=Rv1238;logic_name=ena +Chromosome ena gene 1380684 1381865 . + . ID=gene:Rv1238;Name=sugC;biotype=protein_coding;description=Probable sugar-transport ATP-binding protein ABC transporter SugC;gene_id=Rv1238;logic_name=ena Chromosome ena mRNA 1380684 1381865 . + . ID=transcript:Rv1238;Parent=gene:Rv1238;Name=sugC-1;biotype=protein_coding;transcript_id=Rv1238 Chromosome ena exon 1380684 1381865 . + . Parent=transcript:Rv1238;Name=Rv1238-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1238-1;rank=1 Chromosome ena CDS 1380684 1381865 . + 0 ID=CDS:Rv1238;Parent=transcript:Rv1238;protein_id=Rv1238 ### -Chromosome ena gene 1381942 1383042 . - . ID=gene:Rv1239c;Name=corA;biotype=protein_coding;description=Possible magnesium and cobalt transport transmembrane protein CorA;gene_id=Rv1239c;logic_name=ena +Chromosome ena gene 1381942 1383042 . - . ID=gene:Rv1239c;Name=corA;biotype=protein_coding;description=Possible magnesium and cobalt transport transmembrane protein CorA;gene_id=Rv1239c;logic_name=ena Chromosome ena mRNA 1381942 1383042 . - . ID=transcript:Rv1239c;Parent=gene:Rv1239c;Name=corA-1;biotype=protein_coding;transcript_id=Rv1239c Chromosome ena exon 1381942 1383042 . - . Parent=transcript:Rv1239c;Name=Rv1239c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1239c-1;rank=1 Chromosome ena CDS 1381942 1383042 . - 0 ID=CDS:Rv1239c;Parent=transcript:Rv1239c;protein_id=Rv1239c ### -Chromosome ena gene 1383213 1384202 . + . ID=gene:Rv1240;Name=mdh;biotype=protein_coding;description=Probable malate dehydrogenase Mdh;gene_id=Rv1240;logic_name=ena +Chromosome ena gene 1383213 1384202 . + . ID=gene:Rv1240;Name=mdh;biotype=protein_coding;description=Probable malate dehydrogenase Mdh;gene_id=Rv1240;logic_name=ena Chromosome ena mRNA 1383213 1384202 . + . ID=transcript:Rv1240;Parent=gene:Rv1240;Name=mdh-1;biotype=protein_coding;transcript_id=Rv1240 Chromosome ena exon 1383213 1384202 . + . Parent=transcript:Rv1240;Name=Rv1240-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1240-1;rank=1 Chromosome ena CDS 1383213 1384202 . + 0 ID=CDS:Rv1240;Parent=transcript:Rv1240;protein_id=Rv1240 ### -Chromosome ena gene 1384278 1384538 . + . ID=gene:Rv1241;Name=vapB33;biotype=protein_coding;description=Possible antitoxin VapB33;gene_id=Rv1241;logic_name=ena +Chromosome ena gene 1384278 1384538 . + . ID=gene:Rv1241;Name=vapB33;biotype=protein_coding;description=Possible antitoxin VapB33;gene_id=Rv1241;logic_name=ena Chromosome ena mRNA 1384278 1384538 . + . ID=transcript:Rv1241;Parent=gene:Rv1241;Name=vapB33-1;biotype=protein_coding;transcript_id=Rv1241 Chromosome ena exon 1384278 1384538 . + . Parent=transcript:Rv1241;Name=Rv1241-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1241-1;rank=1 Chromosome ena CDS 1384278 1384538 . + 0 ID=CDS:Rv1241;Parent=transcript:Rv1241;protein_id=Rv1241 ### -Chromosome ena gene 1384535 1384966 . + . ID=gene:Rv1242;Name=vapC33;biotype=protein_coding;description=Possible toxin VapC33. Contains PIN domain.;gene_id=Rv1242;logic_name=ena +Chromosome ena gene 1384535 1384966 . + . ID=gene:Rv1242;Name=vapC33;biotype=protein_coding;description=Possible toxin VapC33. Contains PIN domain.;gene_id=Rv1242;logic_name=ena Chromosome ena mRNA 1384535 1384966 . + . ID=transcript:Rv1242;Parent=gene:Rv1242;Name=vapC33-1;biotype=protein_coding;transcript_id=Rv1242 Chromosome ena exon 1384535 1384966 . + . Parent=transcript:Rv1242;Name=Rv1242-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1242-1;rank=1 Chromosome ena CDS 1384535 1384966 . + 0 ID=CDS:Rv1242;Parent=transcript:Rv1242;protein_id=Rv1242 ### -Chromosome ena gene 1384989 1386677 . - . ID=gene:Rv1243c;Name=PE_PGRS23;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS23;gene_id=Rv1243c;logic_name=ena +Chromosome ena gene 1384989 1386677 . - . ID=gene:Rv1243c;Name=PE_PGRS23;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS23;gene_id=Rv1243c;logic_name=ena Chromosome ena mRNA 1384989 1386677 . - . ID=transcript:Rv1243c;Parent=gene:Rv1243c;Name=PE_PGRS23-1;biotype=protein_coding;transcript_id=Rv1243c Chromosome ena exon 1384989 1386677 . - . Parent=transcript:Rv1243c;Name=Rv1243c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1243c-1;rank=1 Chromosome ena CDS 1384989 1386677 . - 0 ID=CDS:Rv1243c;Parent=transcript:Rv1243c;protein_id=Rv1243c ### -Chromosome ena gene 1386857 1387717 . + . ID=gene:Rv1244;Name=lpqZ;biotype=protein_coding;description=Probable lipoprotein LpqZ;gene_id=Rv1244;logic_name=ena +Chromosome ena gene 1386857 1387717 . + . ID=gene:Rv1244;Name=lpqZ;biotype=protein_coding;description=Probable lipoprotein LpqZ;gene_id=Rv1244;logic_name=ena Chromosome ena mRNA 1386857 1387717 . + . ID=transcript:Rv1244;Parent=gene:Rv1244;Name=lpqZ-1;biotype=protein_coding;transcript_id=Rv1244 Chromosome ena exon 1386857 1387717 . + . Parent=transcript:Rv1244;Name=Rv1244-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1244-1;rank=1 Chromosome ena CDS 1386857 1387717 . + 0 ID=CDS:Rv1244;Parent=transcript:Rv1244;protein_id=Rv1244 ### -Chromosome ena gene 1387798 1388628 . - . ID=gene:Rv1245c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1245c;logic_name=ena +Chromosome ena gene 1387798 1388628 . - . ID=gene:Rv1245c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1245c;logic_name=ena Chromosome ena mRNA 1387798 1388628 . - . ID=transcript:Rv1245c;Parent=gene:Rv1245c;biotype=protein_coding;transcript_id=Rv1245c Chromosome ena exon 1387798 1388628 . - . Parent=transcript:Rv1245c;Name=Rv1245c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1245c-1;rank=1 Chromosome ena CDS 1387798 1388628 . - 0 ID=CDS:Rv1245c;Parent=transcript:Rv1245c;protein_id=Rv1245c ### -Chromosome ena gene 1388685 1388978 . - . ID=gene:Rv1246c;Name=relE;biotype=protein_coding;description=Toxin RelE;gene_id=Rv1246c;logic_name=ena +Chromosome ena gene 1388685 1388978 . - . ID=gene:Rv1246c;Name=relE;biotype=protein_coding;description=Toxin RelE;gene_id=Rv1246c;logic_name=ena Chromosome ena mRNA 1388685 1388978 . - . ID=transcript:Rv1246c;Parent=gene:Rv1246c;Name=relE-1;biotype=protein_coding;transcript_id=Rv1246c Chromosome ena exon 1388685 1388978 . - . Parent=transcript:Rv1246c;Name=Rv1246c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1246c-1;rank=1 Chromosome ena CDS 1388685 1388978 . - 0 ID=CDS:Rv1246c;Parent=transcript:Rv1246c;protein_id=Rv1246c ### -Chromosome ena gene 1388975 1389244 . - . ID=gene:Rv1247c;Name=relB;biotype=protein_coding;description=Antitoxin RelB;gene_id=Rv1247c;logic_name=ena +Chromosome ena gene 1388975 1389244 . - . ID=gene:Rv1247c;Name=relB;biotype=protein_coding;description=Antitoxin RelB;gene_id=Rv1247c;logic_name=ena Chromosome ena mRNA 1388975 1389244 . - . ID=transcript:Rv1247c;Parent=gene:Rv1247c;Name=relB-1;biotype=protein_coding;transcript_id=Rv1247c Chromosome ena exon 1388975 1389244 . - . Parent=transcript:Rv1247c;Name=Rv1247c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1247c-1;rank=1 Chromosome ena CDS 1388975 1389244 . - 0 ID=CDS:Rv1247c;Parent=transcript:Rv1247c;protein_id=Rv1247c ### -Chromosome ena gene 1389357 1393052 . - . ID=gene:Rv1248c;biotype=protein_coding;description=Multifunctional alpha-ketoglutarate metabolic enzyme;gene_id=Rv1248c;logic_name=ena +Chromosome ena gene 1389357 1393052 . - . ID=gene:Rv1248c;biotype=protein_coding;description=Multifunctional alpha-ketoglutarate metabolic enzyme;gene_id=Rv1248c;logic_name=ena Chromosome ena mRNA 1389357 1393052 . - . ID=transcript:Rv1248c;Parent=gene:Rv1248c;biotype=protein_coding;transcript_id=Rv1248c Chromosome ena exon 1389357 1393052 . - . Parent=transcript:Rv1248c;Name=Rv1248c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1248c-1;rank=1 Chromosome ena CDS 1389357 1393052 . - 0 ID=CDS:Rv1248c;Parent=transcript:Rv1248c;protein_id=Rv1248c ### -Chromosome ena gene 1393194 1393982 . - . ID=gene:Rv1249c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1249c;logic_name=ena +Chromosome ena gene 1393194 1393982 . - . ID=gene:Rv1249c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1249c;logic_name=ena Chromosome ena mRNA 1393194 1393982 . - . ID=transcript:Rv1249c;Parent=gene:Rv1249c;biotype=protein_coding;transcript_id=Rv1249c Chromosome ena exon 1393194 1393982 . - . Parent=transcript:Rv1249c;Name=Rv1249c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1249c-1;rank=1 Chromosome ena CDS 1393194 1393982 . - 0 ID=CDS:Rv1249c;Parent=transcript:Rv1249c;protein_id=Rv1249c ### -Chromosome ena gene 1394179 1395918 . + . ID=gene:Rv1250;biotype=protein_coding;description=Probable drug-transport integral membrane protein;gene_id=Rv1250;logic_name=ena +Chromosome ena gene 1394179 1395918 . + . ID=gene:Rv1250;biotype=protein_coding;description=Probable drug-transport integral membrane protein;gene_id=Rv1250;logic_name=ena Chromosome ena mRNA 1394179 1395918 . + . ID=transcript:Rv1250;Parent=gene:Rv1250;biotype=protein_coding;transcript_id=Rv1250 Chromosome ena exon 1394179 1395918 . + . Parent=transcript:Rv1250;Name=Rv1250-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1250-1;rank=1 Chromosome ena CDS 1394179 1395918 . + 0 ID=CDS:Rv1250;Parent=transcript:Rv1250;protein_id=Rv1250 ### -Chromosome ena gene 1395821 1399240 . - . ID=gene:Rv1251c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1251c;logic_name=ena +Chromosome ena gene 1395821 1399240 . - . ID=gene:Rv1251c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1251c;logic_name=ena Chromosome ena mRNA 1395821 1399240 . - . ID=transcript:Rv1251c;Parent=gene:Rv1251c;biotype=protein_coding;transcript_id=Rv1251c Chromosome ena exon 1395821 1399240 . - . Parent=transcript:Rv1251c;Name=Rv1251c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1251c-1;rank=1 Chromosome ena CDS 1395821 1399240 . - 0 ID=CDS:Rv1251c;Parent=transcript:Rv1251c;protein_id=Rv1251c ### -Chromosome ena gene 1399296 1399904 . - . ID=gene:Rv1252c;Name=lprE;biotype=protein_coding;description=Probable lipoprotein LprE;gene_id=Rv1252c;logic_name=ena +Chromosome ena gene 1399296 1399904 . - . ID=gene:Rv1252c;Name=lprE;biotype=protein_coding;description=Probable lipoprotein LprE;gene_id=Rv1252c;logic_name=ena Chromosome ena mRNA 1399296 1399904 . - . ID=transcript:Rv1252c;Parent=gene:Rv1252c;Name=lprE-1;biotype=protein_coding;transcript_id=Rv1252c Chromosome ena exon 1399296 1399904 . - . Parent=transcript:Rv1252c;Name=Rv1252c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1252c-1;rank=1 Chromosome ena CDS 1399296 1399904 . - 0 ID=CDS:Rv1252c;Parent=transcript:Rv1252c;protein_id=Rv1252c ### -Chromosome ena gene 1399970 1401661 . + . ID=gene:Rv1253;Name=deaD;biotype=protein_coding;description=Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog);gene_id=Rv1253;logic_name=ena +Chromosome ena gene 1399970 1401661 . + . ID=gene:Rv1253;Name=deaD;biotype=protein_coding;description=Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog);gene_id=Rv1253;logic_name=ena Chromosome ena mRNA 1399970 1401661 . + . ID=transcript:Rv1253;Parent=gene:Rv1253;Name=deaD-1;biotype=protein_coding;transcript_id=Rv1253 Chromosome ena exon 1399970 1401661 . + . Parent=transcript:Rv1253;Name=Rv1253-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1253-1;rank=1 Chromosome ena CDS 1399970 1401661 . + 0 ID=CDS:Rv1253;Parent=transcript:Rv1253;protein_id=Rv1253 ### -Chromosome ena gene 1401658 1402809 . + . ID=gene:Rv1254;biotype=protein_coding;description=Probable acyltransferase;gene_id=Rv1254;logic_name=ena +Chromosome ena gene 1401658 1402809 . + . ID=gene:Rv1254;biotype=protein_coding;description=Probable acyltransferase;gene_id=Rv1254;logic_name=ena Chromosome ena mRNA 1401658 1402809 . + . ID=transcript:Rv1254;Parent=gene:Rv1254;biotype=protein_coding;transcript_id=Rv1254 Chromosome ena exon 1401658 1402809 . + . Parent=transcript:Rv1254;Name=Rv1254-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1254-1;rank=1 Chromosome ena CDS 1401658 1402809 . + 0 ID=CDS:Rv1254;Parent=transcript:Rv1254;protein_id=Rv1254 ### -Chromosome ena gene 1402778 1403386 . - . ID=gene:Rv1255c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1255c;logic_name=ena +Chromosome ena gene 1402778 1403386 . - . ID=gene:Rv1255c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1255c;logic_name=ena Chromosome ena mRNA 1402778 1403386 . - . ID=transcript:Rv1255c;Parent=gene:Rv1255c;biotype=protein_coding;transcript_id=Rv1255c Chromosome ena exon 1402778 1403386 . - . Parent=transcript:Rv1255c;Name=Rv1255c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1255c-1;rank=1 Chromosome ena CDS 1402778 1403386 . - 0 ID=CDS:Rv1255c;Parent=transcript:Rv1255c;protein_id=Rv1255c ### -Chromosome ena gene 1403386 1404603 . - . ID=gene:Rv1256c;Name=cyp130;biotype=protein_coding;description=Probable cytochrome P450 130 Cyp130;gene_id=Rv1256c;logic_name=ena +Chromosome ena gene 1403386 1404603 . - . ID=gene:Rv1256c;Name=cyp130;biotype=protein_coding;description=Probable cytochrome P450 130 Cyp130;gene_id=Rv1256c;logic_name=ena Chromosome ena mRNA 1403386 1404603 . - . ID=transcript:Rv1256c;Parent=gene:Rv1256c;Name=cyp130-1;biotype=protein_coding;transcript_id=Rv1256c Chromosome ena exon 1403386 1404603 . - . Parent=transcript:Rv1256c;Name=Rv1256c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1256c-1;rank=1 Chromosome ena CDS 1403386 1404603 . - 0 ID=CDS:Rv1256c;Parent=transcript:Rv1256c;protein_id=Rv1256c ### -Chromosome ena gene 1404717 1406084 . - . ID=gene:Rv1257c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1257c;logic_name=ena +Chromosome ena gene 1404717 1406084 . - . ID=gene:Rv1257c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1257c;logic_name=ena Chromosome ena mRNA 1404717 1406084 . - . ID=transcript:Rv1257c;Parent=gene:Rv1257c;biotype=protein_coding;transcript_id=Rv1257c Chromosome ena exon 1404717 1406084 . - . Parent=transcript:Rv1257c;Name=Rv1257c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1257c-1;rank=1 Chromosome ena CDS 1404717 1406084 . - 0 ID=CDS:Rv1257c;Parent=transcript:Rv1257c;protein_id=Rv1257c ### -Chromosome ena gene 1406081 1407340 . - . ID=gene:Rv1258c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1258c;logic_name=ena +Chromosome ena gene 1406081 1407340 . - . ID=gene:Rv1258c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1258c;logic_name=ena Chromosome ena mRNA 1406081 1407340 . - . ID=transcript:Rv1258c;Parent=gene:Rv1258c;biotype=protein_coding;transcript_id=Rv1258c Chromosome ena exon 1406081 1407340 . - . Parent=transcript:Rv1258c;Name=Rv1258c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1258c-1;rank=1 Chromosome ena CDS 1406081 1407340 . - 0 ID=CDS:Rv1258c;Parent=transcript:Rv1258c;protein_id=Rv1258c ### -Chromosome ena gene 1407339 1408238 . + . ID=gene:Rv1259;Name=udgB;biotype=protein_coding;description=Probable uracil DNA glycosylase%2C UdgB;gene_id=Rv1259;logic_name=ena +Chromosome ena gene 1407339 1408238 . + . ID=gene:Rv1259;Name=udgB;biotype=protein_coding;description=Probable uracil DNA glycosylase%2C UdgB;gene_id=Rv1259;logic_name=ena Chromosome ena mRNA 1407339 1408238 . + . ID=transcript:Rv1259;Parent=gene:Rv1259;Name=udgB-1;biotype=protein_coding;transcript_id=Rv1259 Chromosome ena exon 1407339 1408238 . + . Parent=transcript:Rv1259;Name=Rv1259-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1259-1;rank=1 Chromosome ena CDS 1407339 1408238 . + 0 ID=CDS:Rv1259;Parent=transcript:Rv1259;protein_id=Rv1259 ### -Chromosome ena gene 1408240 1409358 . + . ID=gene:Rv1260;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1260;logic_name=ena +Chromosome ena gene 1408240 1409358 . + . ID=gene:Rv1260;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1260;logic_name=ena Chromosome ena mRNA 1408240 1409358 . + . ID=transcript:Rv1260;Parent=gene:Rv1260;biotype=protein_coding;transcript_id=Rv1260 Chromosome ena exon 1408240 1409358 . + . Parent=transcript:Rv1260;Name=Rv1260-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1260-1;rank=1 Chromosome ena CDS 1408240 1409358 . + 0 ID=CDS:Rv1260;Parent=transcript:Rv1260;protein_id=Rv1260 ### -Chromosome ena gene 1409484 1409933 . - . ID=gene:Rv1261c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1261c;logic_name=ena +Chromosome ena gene 1409484 1409933 . - . ID=gene:Rv1261c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1261c;logic_name=ena Chromosome ena mRNA 1409484 1409933 . - . ID=transcript:Rv1261c;Parent=gene:Rv1261c;biotype=protein_coding;transcript_id=Rv1261c Chromosome ena exon 1409484 1409933 . - . Parent=transcript:Rv1261c;Name=Rv1261c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1261c-1;rank=1 Chromosome ena CDS 1409484 1409933 . - 0 ID=CDS:Rv1261c;Parent=transcript:Rv1261c;protein_id=Rv1261c ### -Chromosome ena gene 1409938 1410372 . - . ID=gene:Rv1262c;biotype=protein_coding;description=Hypothetical hit-like protein;gene_id=Rv1262c;logic_name=ena +Chromosome ena gene 1409938 1410372 . - . ID=gene:Rv1262c;biotype=protein_coding;description=Hypothetical hit-like protein;gene_id=Rv1262c;logic_name=ena Chromosome ena mRNA 1409938 1410372 . - . ID=transcript:Rv1262c;Parent=gene:Rv1262c;biotype=protein_coding;transcript_id=Rv1262c Chromosome ena exon 1409938 1410372 . - . Parent=transcript:Rv1262c;Name=Rv1262c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1262c-1;rank=1 Chromosome ena CDS 1409938 1410372 . - 0 ID=CDS:Rv1262c;Parent=transcript:Rv1262c;protein_id=Rv1262c ### -Chromosome ena gene 1410431 1411819 . + . ID=gene:Rv1263;Name=amiB2;biotype=protein_coding;description=Probable amidase AmiB2 (aminohydrolase);gene_id=Rv1263;logic_name=ena +Chromosome ena gene 1410431 1411819 . + . ID=gene:Rv1263;Name=amiB2;biotype=protein_coding;description=Probable amidase AmiB2 (aminohydrolase);gene_id=Rv1263;logic_name=ena Chromosome ena mRNA 1410431 1411819 . + . ID=transcript:Rv1263;Parent=gene:Rv1263;Name=amiB2-1;biotype=protein_coding;transcript_id=Rv1263 Chromosome ena exon 1410431 1411819 . + . Parent=transcript:Rv1263;Name=Rv1263-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1263-1;rank=1 Chromosome ena CDS 1410431 1411819 . + 0 ID=CDS:Rv1263;Parent=transcript:Rv1263;protein_id=Rv1263 ### -Chromosome ena gene 1411894 1413087 . + . ID=gene:Rv1264;biotype=protein_coding;description=Adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv1264;logic_name=ena +Chromosome ena gene 1411894 1413087 . + . ID=gene:Rv1264;biotype=protein_coding;description=Adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv1264;logic_name=ena Chromosome ena mRNA 1411894 1413087 . + . ID=transcript:Rv1264;Parent=gene:Rv1264;biotype=protein_coding;transcript_id=Rv1264 Chromosome ena exon 1411894 1413087 . + . Parent=transcript:Rv1264;Name=Rv1264-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1264-1;rank=1 Chromosome ena CDS 1411894 1413087 . + 0 ID=CDS:Rv1264;Parent=transcript:Rv1264;protein_id=Rv1264 @@ -6642,142 +6642,142 @@ Chromosome ena transcript 1413094 1413224 . - . ID=transcript:EBG00000313343;Par Chromosome ena exon 1413094 1413224 . - . Parent=transcript:EBG00000313343;Name=EBG00000313343;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313343;rank=1 ### Chromosome ena_gene biological_region 1413094 1413224 . - . external_name=AL123456.3:gene:complement(1413094..1413224);logic_name=ena_gene -Chromosome ena gene 1413260 1413940 . + . ID=gene:Rv1265;biotype=protein_coding;description=Unknown protein;gene_id=Rv1265;logic_name=ena +Chromosome ena gene 1413260 1413940 . + . ID=gene:Rv1265;biotype=protein_coding;description=Unknown protein;gene_id=Rv1265;logic_name=ena Chromosome ena mRNA 1413260 1413940 . + . ID=transcript:Rv1265;Parent=gene:Rv1265;biotype=protein_coding;transcript_id=Rv1265 Chromosome ena exon 1413260 1413940 . + . Parent=transcript:Rv1265;Name=Rv1265-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1265-1;rank=1 Chromosome ena CDS 1413260 1413940 . + 0 ID=CDS:Rv1265;Parent=transcript:Rv1265;protein_id=Rv1265 ### -Chromosome ena gene 1413960 1415840 . - . ID=gene:Rv1266c;Name=pknH;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase H PknH (protein kinase H) (STPK H);gene_id=Rv1266c;logic_name=ena +Chromosome ena gene 1413960 1415840 . - . ID=gene:Rv1266c;Name=pknH;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase H PknH (protein kinase H) (STPK H);gene_id=Rv1266c;logic_name=ena Chromosome ena mRNA 1413960 1415840 . - . ID=transcript:Rv1266c;Parent=gene:Rv1266c;Name=pknH-1;biotype=protein_coding;transcript_id=Rv1266c Chromosome ena exon 1413960 1415840 . - . Parent=transcript:Rv1266c;Name=Rv1266c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1266c-1;rank=1 Chromosome ena CDS 1413960 1415840 . - 0 ID=CDS:Rv1266c;Parent=transcript:Rv1266c;protein_id=Rv1266c ### -Chromosome ena gene 1416181 1417347 . - . ID=gene:Rv1267c;Name=embR;biotype=protein_coding;description=Probable transcriptional regulatory protein EmbR;gene_id=Rv1267c;logic_name=ena +Chromosome ena gene 1416181 1417347 . - . ID=gene:Rv1267c;Name=embR;biotype=protein_coding;description=Probable transcriptional regulatory protein EmbR;gene_id=Rv1267c;logic_name=ena Chromosome ena mRNA 1416181 1417347 . - . ID=transcript:Rv1267c;Parent=gene:Rv1267c;Name=embR-1;biotype=protein_coding;transcript_id=Rv1267c Chromosome ena exon 1416181 1417347 . - . Parent=transcript:Rv1267c;Name=Rv1267c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1267c-1;rank=1 Chromosome ena CDS 1416181 1417347 . - 0 ID=CDS:Rv1267c;Parent=transcript:Rv1267c;protein_id=Rv1267c ### -Chromosome ena gene 1417658 1418356 . - . ID=gene:Rv1268c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1268c;logic_name=ena +Chromosome ena gene 1417658 1418356 . - . ID=gene:Rv1268c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1268c;logic_name=ena Chromosome ena mRNA 1417658 1418356 . - . ID=transcript:Rv1268c;Parent=gene:Rv1268c;biotype=protein_coding;transcript_id=Rv1268c Chromosome ena exon 1417658 1418356 . - . Parent=transcript:Rv1268c;Name=Rv1268c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1268c-1;rank=1 Chromosome ena CDS 1417658 1418356 . - 0 ID=CDS:Rv1268c;Parent=transcript:Rv1268c;protein_id=Rv1268c ### -Chromosome ena gene 1418579 1418953 . - . ID=gene:Rv1269c;biotype=protein_coding;description=Conserved probable secreted protein;gene_id=Rv1269c;logic_name=ena +Chromosome ena gene 1418579 1418953 . - . ID=gene:Rv1269c;biotype=protein_coding;description=Conserved probable secreted protein;gene_id=Rv1269c;logic_name=ena Chromosome ena mRNA 1418579 1418953 . - . ID=transcript:Rv1269c;Parent=gene:Rv1269c;biotype=protein_coding;transcript_id=Rv1269c Chromosome ena exon 1418579 1418953 . - . Parent=transcript:Rv1269c;Name=Rv1269c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1269c-1;rank=1 Chromosome ena CDS 1418579 1418953 . - 0 ID=CDS:Rv1269c;Parent=transcript:Rv1269c;protein_id=Rv1269c ### -Chromosome ena gene 1419014 1419748 . - . ID=gene:Rv1270c;Name=lprA;biotype=protein_coding;description=Possible lipoprotein LprA;gene_id=Rv1270c;logic_name=ena +Chromosome ena gene 1419014 1419748 . - . ID=gene:Rv1270c;Name=lprA;biotype=protein_coding;description=Possible lipoprotein LprA;gene_id=Rv1270c;logic_name=ena Chromosome ena mRNA 1419014 1419748 . - . ID=transcript:Rv1270c;Parent=gene:Rv1270c;Name=lprA-1;biotype=protein_coding;transcript_id=Rv1270c Chromosome ena exon 1419014 1419748 . - . Parent=transcript:Rv1270c;Name=Rv1270c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1270c-1;rank=1 Chromosome ena CDS 1419014 1419748 . - 0 ID=CDS:Rv1270c;Parent=transcript:Rv1270c;protein_id=Rv1270c ### -Chromosome ena gene 1419961 1420302 . - . ID=gene:Rv1271c;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1271c;logic_name=ena +Chromosome ena gene 1419961 1420302 . - . ID=gene:Rv1271c;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1271c;logic_name=ena Chromosome ena mRNA 1419961 1420302 . - . ID=transcript:Rv1271c;Parent=gene:Rv1271c;biotype=protein_coding;transcript_id=Rv1271c Chromosome ena exon 1419961 1420302 . - . Parent=transcript:Rv1271c;Name=Rv1271c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1271c-1;rank=1 Chromosome ena CDS 1419961 1420302 . - 0 ID=CDS:Rv1271c;Parent=transcript:Rv1271c;protein_id=Rv1271c ### -Chromosome ena gene 1420410 1422305 . - . ID=gene:Rv1272c;biotype=protein_coding;description=Probable drugs-transport transmembrane ATP-binding protein ABC transporter;gene_id=Rv1272c;logic_name=ena +Chromosome ena gene 1420410 1422305 . - . ID=gene:Rv1272c;biotype=protein_coding;description=Probable drugs-transport transmembrane ATP-binding protein ABC transporter;gene_id=Rv1272c;logic_name=ena Chromosome ena mRNA 1420410 1422305 . - . ID=transcript:Rv1272c;Parent=gene:Rv1272c;biotype=protein_coding;transcript_id=Rv1272c Chromosome ena exon 1420410 1422305 . - . Parent=transcript:Rv1272c;Name=Rv1272c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1272c-1;rank=1 Chromosome ena CDS 1420410 1422305 . - 0 ID=CDS:Rv1272c;Parent=transcript:Rv1272c;protein_id=Rv1272c ### -Chromosome ena gene 1422302 1424050 . - . ID=gene:Rv1273c;biotype=protein_coding;description=Probable drugs-transport transmembrane ATP-binding protein ABC transporter;gene_id=Rv1273c;logic_name=ena +Chromosome ena gene 1422302 1424050 . - . ID=gene:Rv1273c;biotype=protein_coding;description=Probable drugs-transport transmembrane ATP-binding protein ABC transporter;gene_id=Rv1273c;logic_name=ena Chromosome ena mRNA 1422302 1424050 . - . ID=transcript:Rv1273c;Parent=gene:Rv1273c;biotype=protein_coding;transcript_id=Rv1273c Chromosome ena exon 1422302 1424050 . - . Parent=transcript:Rv1273c;Name=Rv1273c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1273c-1;rank=1 Chromosome ena CDS 1422302 1424050 . - 0 ID=CDS:Rv1273c;Parent=transcript:Rv1273c;protein_id=Rv1273c ### -Chromosome ena gene 1424197 1424754 . + . ID=gene:Rv1274;Name=lprB;biotype=protein_coding;description=Possible lipoprotein LprB;gene_id=Rv1274;logic_name=ena +Chromosome ena gene 1424197 1424754 . + . ID=gene:Rv1274;Name=lprB;biotype=protein_coding;description=Possible lipoprotein LprB;gene_id=Rv1274;logic_name=ena Chromosome ena mRNA 1424197 1424754 . + . ID=transcript:Rv1274;Parent=gene:Rv1274;Name=lprB-1;biotype=protein_coding;transcript_id=Rv1274 Chromosome ena exon 1424197 1424754 . + . Parent=transcript:Rv1274;Name=Rv1274-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1274-1;rank=1 Chromosome ena CDS 1424197 1424754 . + 0 ID=CDS:Rv1274;Parent=transcript:Rv1274;protein_id=Rv1274 ### -Chromosome ena gene 1424751 1425293 . + . ID=gene:Rv1275;Name=lprC;biotype=protein_coding;description=Possible lipoprotein LprC;gene_id=Rv1275;logic_name=ena +Chromosome ena gene 1424751 1425293 . + . ID=gene:Rv1275;Name=lprC;biotype=protein_coding;description=Possible lipoprotein LprC;gene_id=Rv1275;logic_name=ena Chromosome ena mRNA 1424751 1425293 . + . ID=transcript:Rv1275;Parent=gene:Rv1275;Name=lprC-1;biotype=protein_coding;transcript_id=Rv1275 Chromosome ena exon 1424751 1425293 . + . Parent=transcript:Rv1275;Name=Rv1275-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1275-1;rank=1 Chromosome ena CDS 1424751 1425293 . + 0 ID=CDS:Rv1275;Parent=transcript:Rv1275;protein_id=Rv1275 ### -Chromosome ena gene 1425438 1425914 . - . ID=gene:Rv1276c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1276c;logic_name=ena +Chromosome ena gene 1425438 1425914 . - . ID=gene:Rv1276c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1276c;logic_name=ena Chromosome ena mRNA 1425438 1425914 . - . ID=transcript:Rv1276c;Parent=gene:Rv1276c;biotype=protein_coding;transcript_id=Rv1276c Chromosome ena exon 1425438 1425914 . - . Parent=transcript:Rv1276c;Name=Rv1276c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1276c-1;rank=1 Chromosome ena CDS 1425438 1425914 . - 0 ID=CDS:Rv1276c;Parent=transcript:Rv1276c;protein_id=Rv1276c ### -Chromosome ena gene 1426164 1427417 . + . ID=gene:Rv1277;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1277;logic_name=ena +Chromosome ena gene 1426164 1427417 . + . ID=gene:Rv1277;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1277;logic_name=ena Chromosome ena mRNA 1426164 1427417 . + . ID=transcript:Rv1277;Parent=gene:Rv1277;biotype=protein_coding;transcript_id=Rv1277 Chromosome ena exon 1426164 1427417 . + . Parent=transcript:Rv1277;Name=Rv1277-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1277-1;rank=1 Chromosome ena CDS 1426164 1427417 . + 0 ID=CDS:Rv1277;Parent=transcript:Rv1277;protein_id=Rv1277 ### -Chromosome ena gene 1427414 1430041 . + . ID=gene:Rv1278;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1278;logic_name=ena +Chromosome ena gene 1427414 1430041 . + . ID=gene:Rv1278;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1278;logic_name=ena Chromosome ena mRNA 1427414 1430041 . + . ID=transcript:Rv1278;Parent=gene:Rv1278;biotype=protein_coding;transcript_id=Rv1278 Chromosome ena exon 1427414 1430041 . + . Parent=transcript:Rv1278;Name=Rv1278-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1278-1;rank=1 Chromosome ena CDS 1427414 1430041 . + 0 ID=CDS:Rv1278;Parent=transcript:Rv1278;protein_id=Rv1278 ### -Chromosome ena gene 1430062 1431648 . + . ID=gene:Rv1279;biotype=protein_coding;description=Probable dehydrogenase FAD flavoprotein GMC oxidoreductase;gene_id=Rv1279;logic_name=ena +Chromosome ena gene 1430062 1431648 . + . ID=gene:Rv1279;biotype=protein_coding;description=Probable dehydrogenase FAD flavoprotein GMC oxidoreductase;gene_id=Rv1279;logic_name=ena Chromosome ena mRNA 1430062 1431648 . + . ID=transcript:Rv1279;Parent=gene:Rv1279;biotype=protein_coding;transcript_id=Rv1279 Chromosome ena exon 1430062 1431648 . + . Parent=transcript:Rv1279;Name=Rv1279-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1279-1;rank=1 Chromosome ena CDS 1430062 1431648 . + 0 ID=CDS:Rv1279;Parent=transcript:Rv1279;protein_id=Rv1279 ### -Chromosome ena gene 1431665 1433440 . - . ID=gene:Rv1280c;Name=oppA;biotype=protein_coding;description=Probable periplasmic oligopeptide-binding lipoprotein OppA;gene_id=Rv1280c;logic_name=ena +Chromosome ena gene 1431665 1433440 . - . ID=gene:Rv1280c;Name=oppA;biotype=protein_coding;description=Probable periplasmic oligopeptide-binding lipoprotein OppA;gene_id=Rv1280c;logic_name=ena Chromosome ena mRNA 1431665 1433440 . - . ID=transcript:Rv1280c;Parent=gene:Rv1280c;Name=oppA-1;biotype=protein_coding;transcript_id=Rv1280c Chromosome ena exon 1431665 1433440 . - . Parent=transcript:Rv1280c;Name=Rv1280c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1280c-1;rank=1 Chromosome ena CDS 1431665 1433440 . - 0 ID=CDS:Rv1280c;Parent=transcript:Rv1280c;protein_id=Rv1280c ### -Chromosome ena gene 1433433 1435271 . - . ID=gene:Rv1281c;Name=oppD;biotype=protein_coding;description=Probable oligopeptide-transport ATP-binding protein ABC transporter OppD;gene_id=Rv1281c;logic_name=ena +Chromosome ena gene 1433433 1435271 . - . ID=gene:Rv1281c;Name=oppD;biotype=protein_coding;description=Probable oligopeptide-transport ATP-binding protein ABC transporter OppD;gene_id=Rv1281c;logic_name=ena Chromosome ena mRNA 1433433 1435271 . - . ID=transcript:Rv1281c;Parent=gene:Rv1281c;Name=oppD-1;biotype=protein_coding;transcript_id=Rv1281c Chromosome ena exon 1433433 1435271 . - . Parent=transcript:Rv1281c;Name=Rv1281c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1281c-1;rank=1 Chromosome ena CDS 1433433 1435271 . - 0 ID=CDS:Rv1281c;Parent=transcript:Rv1281c;protein_id=Rv1281c ### -Chromosome ena gene 1435268 1436143 . - . ID=gene:Rv1282c;Name=oppC;biotype=protein_coding;description=Probable oligopeptide-transport integral membrane protein ABC transporter OppC;gene_id=Rv1282c;logic_name=ena +Chromosome ena gene 1435268 1436143 . - . ID=gene:Rv1282c;Name=oppC;biotype=protein_coding;description=Probable oligopeptide-transport integral membrane protein ABC transporter OppC;gene_id=Rv1282c;logic_name=ena Chromosome ena mRNA 1435268 1436143 . - . ID=transcript:Rv1282c;Parent=gene:Rv1282c;Name=oppC-1;biotype=protein_coding;transcript_id=Rv1282c Chromosome ena exon 1435268 1436143 . - . Parent=transcript:Rv1282c;Name=Rv1282c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1282c-1;rank=1 Chromosome ena CDS 1435268 1436143 . - 0 ID=CDS:Rv1282c;Parent=transcript:Rv1282c;protein_id=Rv1282c ### -Chromosome ena gene 1436140 1437117 . - . ID=gene:Rv1283c;Name=oppB;biotype=protein_coding;description=Probable oligopeptide-transport integral membrane protein ABC transporter OppB;gene_id=Rv1283c;logic_name=ena +Chromosome ena gene 1436140 1437117 . - . ID=gene:Rv1283c;Name=oppB;biotype=protein_coding;description=Probable oligopeptide-transport integral membrane protein ABC transporter OppB;gene_id=Rv1283c;logic_name=ena Chromosome ena mRNA 1436140 1437117 . - . ID=transcript:Rv1283c;Parent=gene:Rv1283c;Name=oppB-1;biotype=protein_coding;transcript_id=Rv1283c Chromosome ena exon 1436140 1437117 . - . Parent=transcript:Rv1283c;Name=Rv1283c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1283c-1;rank=1 Chromosome ena CDS 1436140 1437117 . - 0 ID=CDS:Rv1283c;Parent=transcript:Rv1283c;protein_id=Rv1283c ### -Chromosome ena gene 1437324 1437815 . + . ID=gene:Rv1284;Name=canA;biotype=protein_coding;description=Beta-carbonic anhydrase;gene_id=Rv1284;logic_name=ena +Chromosome ena gene 1437324 1437815 . + . ID=gene:Rv1284;Name=canA;biotype=protein_coding;description=Beta-carbonic anhydrase;gene_id=Rv1284;logic_name=ena Chromosome ena mRNA 1437324 1437815 . + . ID=transcript:Rv1284;Parent=gene:Rv1284;Name=canA-1;biotype=protein_coding;transcript_id=Rv1284 Chromosome ena exon 1437324 1437815 . + . Parent=transcript:Rv1284;Name=Rv1284-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1284-1;rank=1 Chromosome ena CDS 1437324 1437815 . + 0 ID=CDS:Rv1284;Parent=transcript:Rv1284;protein_id=Rv1284 ### -Chromosome ena gene 1437909 1438907 . + . ID=gene:Rv1285;Name=cysD;biotype=protein_coding;description=Probable sulfate adenylyltransferase subunit 2 CysD;gene_id=Rv1285;logic_name=ena +Chromosome ena gene 1437909 1438907 . + . ID=gene:Rv1285;Name=cysD;biotype=protein_coding;description=Probable sulfate adenylyltransferase subunit 2 CysD;gene_id=Rv1285;logic_name=ena Chromosome ena mRNA 1437909 1438907 . + . ID=transcript:Rv1285;Parent=gene:Rv1285;Name=cysD-1;biotype=protein_coding;transcript_id=Rv1285 Chromosome ena exon 1437909 1438907 . + . Parent=transcript:Rv1285;Name=Rv1285-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1285-1;rank=1 Chromosome ena CDS 1437909 1438907 . + 0 ID=CDS:Rv1285;Parent=transcript:Rv1285;protein_id=Rv1285 ### -Chromosome ena gene 1438907 1440751 . + . ID=gene:Rv1286;Name=cysN;biotype=protein_coding;description=Probable bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase;gene_id=Rv1286;logic_name=ena +Chromosome ena gene 1438907 1440751 . + . ID=gene:Rv1286;Name=cysN;biotype=protein_coding;description=Probable bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase;gene_id=Rv1286;logic_name=ena Chromosome ena mRNA 1438907 1440751 . + . ID=transcript:Rv1286;Parent=gene:Rv1286;Name=cysN-1;biotype=protein_coding;transcript_id=Rv1286 Chromosome ena exon 1438907 1440751 . + . Parent=transcript:Rv1286;Name=Rv1286-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1286-1;rank=1 Chromosome ena CDS 1438907 1440751 . + 0 ID=CDS:Rv1286;Parent=transcript:Rv1286;protein_id=Rv1286 ### -Chromosome ena gene 1440805 1441290 . + . ID=gene:Rv1287;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1287;logic_name=ena +Chromosome ena gene 1440805 1441290 . + . ID=gene:Rv1287;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1287;logic_name=ena Chromosome ena mRNA 1440805 1441290 . + . ID=transcript:Rv1287;Parent=gene:Rv1287;biotype=protein_coding;transcript_id=Rv1287 Chromosome ena exon 1440805 1441290 . + . Parent=transcript:Rv1287;Name=Rv1287-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1287-1;rank=1 Chromosome ena CDS 1440805 1441290 . + 0 ID=CDS:Rv1287;Parent=transcript:Rv1287;protein_id=Rv1287 ### -Chromosome ena gene 1441348 1442718 . + . ID=gene:Rv1288;biotype=protein_coding;description=Conserved protein;gene_id=Rv1288;logic_name=ena +Chromosome ena gene 1441348 1442718 . + . ID=gene:Rv1288;biotype=protein_coding;description=Conserved protein;gene_id=Rv1288;logic_name=ena Chromosome ena mRNA 1441348 1442718 . + . ID=transcript:Rv1288;Parent=gene:Rv1288;biotype=protein_coding;transcript_id=Rv1288 Chromosome ena exon 1441348 1442718 . + . Parent=transcript:Rv1288;Name=Rv1288-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1288-1;rank=1 Chromosome ena CDS 1441348 1442718 . + 0 ID=CDS:Rv1288;Parent=transcript:Rv1288;protein_id=Rv1288 ### -Chromosome ena gene 1442767 1443399 . + . ID=gene:Rv1289;biotype=protein_coding;description=Unknown protein;gene_id=Rv1289;logic_name=ena +Chromosome ena gene 1442767 1443399 . + . ID=gene:Rv1289;biotype=protein_coding;description=Unknown protein;gene_id=Rv1289;logic_name=ena Chromosome ena mRNA 1442767 1443399 . + . ID=transcript:Rv1289;Parent=gene:Rv1289;biotype=protein_coding;transcript_id=Rv1289 Chromosome ena exon 1442767 1443399 . + . Parent=transcript:Rv1289;Name=Rv1289-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1289-1;rank=1 Chromosome ena CDS 1442767 1443399 . + 0 ID=CDS:Rv1289;Parent=transcript:Rv1289;protein_id=Rv1289 ### -Chromosome ena gene 1443482 1445047 . - . ID=gene:Rv1290c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1290c;logic_name=ena +Chromosome ena gene 1443482 1445047 . - . ID=gene:Rv1290c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1290c;logic_name=ena Chromosome ena mRNA 1443482 1445047 . - . ID=transcript:Rv1290c;Parent=gene:Rv1290c;biotype=protein_coding;transcript_id=Rv1290c Chromosome ena exon 1443482 1445047 . - . Parent=transcript:Rv1290c;Name=Rv1290c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1290c-1;rank=1 Chromosome ena CDS 1443482 1445047 . - 0 ID=CDS:Rv1290c;Parent=transcript:Rv1290c;protein_id=Rv1290c ### -Chromosome ena gene 1445058 1445372 . + . ID=gene:Rv1290A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1290A;logic_name=ena +Chromosome ena gene 1445058 1445372 . + . ID=gene:Rv1290A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1290A;logic_name=ena Chromosome ena mRNA 1445058 1445372 . + . ID=transcript:Rv1290A;Parent=gene:Rv1290A;biotype=protein_coding;transcript_id=Rv1290A Chromosome ena exon 1445058 1445372 . + . Parent=transcript:Rv1290A;Name=Rv1290A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1290A-1;rank=1 Chromosome ena CDS 1445058 1445372 . + 0 ID=CDS:Rv1290A;Parent=transcript:Rv1290A;protein_id=Rv1290A ### -Chromosome ena gene 1445499 1445834 . - . ID=gene:Rv1291c;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1291c;logic_name=ena +Chromosome ena gene 1445499 1445834 . - . ID=gene:Rv1291c;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1291c;logic_name=ena Chromosome ena mRNA 1445499 1445834 . - . ID=transcript:Rv1291c;Parent=gene:Rv1291c;biotype=protein_coding;transcript_id=Rv1291c Chromosome ena exon 1445499 1445834 . - . Parent=transcript:Rv1291c;Name=Rv1291c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1291c-1;rank=1 Chromosome ena CDS 1445499 1445834 . - 0 ID=CDS:Rv1291c;Parent=transcript:Rv1291c;protein_id=Rv1291c @@ -6787,123 +6787,123 @@ Chromosome ena transcript 1446193 1446265 . - . ID=transcript:EBG00000313334;Par Chromosome ena exon 1446193 1446265 . - . Parent=transcript:EBG00000313334;Name=EBG00000313334;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313334;rank=1 ### Chromosome ena_gene biological_region 1446193 1446265 . - . external_name=AL123456.3:gene:complement(1446193..1446265);logic_name=ena_gene -Chromosome ena gene 1446379 1448031 . + . ID=gene:Rv1292;Name=argS;biotype=protein_coding;description=Probable arginyl-tRNA synthetase ArgS (ARGRS) (arginine--tRNA ligase);gene_id=Rv1292;logic_name=ena +Chromosome ena gene 1446379 1448031 . + . ID=gene:Rv1292;Name=argS;biotype=protein_coding;description=Probable arginyl-tRNA synthetase ArgS (ARGRS) (arginine--tRNA ligase);gene_id=Rv1292;logic_name=ena Chromosome ena mRNA 1446379 1448031 . + . ID=transcript:Rv1292;Parent=gene:Rv1292;Name=argS-1;biotype=protein_coding;transcript_id=Rv1292 Chromosome ena exon 1446379 1448031 . + . Parent=transcript:Rv1292;Name=Rv1292-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1292-1;rank=1 Chromosome ena CDS 1446379 1448031 . + 0 ID=CDS:Rv1292;Parent=transcript:Rv1292;protein_id=Rv1292 ### -Chromosome ena gene 1448028 1449371 . + . ID=gene:Rv1293;Name=lysA;biotype=protein_coding;description=Diaminopimelate decarboxylase LysA (DAP decarboxylase);gene_id=Rv1293;logic_name=ena +Chromosome ena gene 1448028 1449371 . + . ID=gene:Rv1293;Name=lysA;biotype=protein_coding;description=Diaminopimelate decarboxylase LysA (DAP decarboxylase);gene_id=Rv1293;logic_name=ena Chromosome ena mRNA 1448028 1449371 . + . ID=transcript:Rv1293;Parent=gene:Rv1293;Name=lysA-1;biotype=protein_coding;transcript_id=Rv1293 Chromosome ena exon 1448028 1449371 . + . Parent=transcript:Rv1293;Name=Rv1293-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1293-1;rank=1 Chromosome ena CDS 1448028 1449371 . + 0 ID=CDS:Rv1293;Parent=transcript:Rv1293;protein_id=Rv1293 ### -Chromosome ena gene 1449375 1450700 . + . ID=gene:Rv1294;Name=thrA;biotype=protein_coding;description=Probable homoserine dehydrogenase ThrA;gene_id=Rv1294;logic_name=ena +Chromosome ena gene 1449375 1450700 . + . ID=gene:Rv1294;Name=thrA;biotype=protein_coding;description=Probable homoserine dehydrogenase ThrA;gene_id=Rv1294;logic_name=ena Chromosome ena mRNA 1449375 1450700 . + . ID=transcript:Rv1294;Parent=gene:Rv1294;Name=thrA-1;biotype=protein_coding;transcript_id=Rv1294 Chromosome ena exon 1449375 1450700 . + . Parent=transcript:Rv1294;Name=Rv1294-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1294-1;rank=1 Chromosome ena CDS 1449375 1450700 . + 0 ID=CDS:Rv1294;Parent=transcript:Rv1294;protein_id=Rv1294 ### -Chromosome ena gene 1450697 1451779 . + . ID=gene:Rv1295;Name=thrC;biotype=protein_coding;description=Threonine synthase ThrC (ts);gene_id=Rv1295;logic_name=ena +Chromosome ena gene 1450697 1451779 . + . ID=gene:Rv1295;Name=thrC;biotype=protein_coding;description=Threonine synthase ThrC (ts);gene_id=Rv1295;logic_name=ena Chromosome ena mRNA 1450697 1451779 . + . ID=transcript:Rv1295;Parent=gene:Rv1295;Name=thrC-1;biotype=protein_coding;transcript_id=Rv1295 Chromosome ena exon 1450697 1451779 . + . Parent=transcript:Rv1295;Name=Rv1295-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1295-1;rank=1 Chromosome ena CDS 1450697 1451779 . + 0 ID=CDS:Rv1295;Parent=transcript:Rv1295;protein_id=Rv1295 ### -Chromosome ena gene 1451997 1452947 . + . ID=gene:Rv1296;Name=thrB;biotype=protein_coding;description=Probable homoserine kinase ThrB;gene_id=Rv1296;logic_name=ena +Chromosome ena gene 1451997 1452947 . + . ID=gene:Rv1296;Name=thrB;biotype=protein_coding;description=Probable homoserine kinase ThrB;gene_id=Rv1296;logic_name=ena Chromosome ena mRNA 1451997 1452947 . + . ID=transcript:Rv1296;Parent=gene:Rv1296;Name=thrB-1;biotype=protein_coding;transcript_id=Rv1296 Chromosome ena exon 1451997 1452947 . + . Parent=transcript:Rv1296;Name=Rv1296-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1296-1;rank=1 Chromosome ena CDS 1451997 1452947 . + 0 ID=CDS:Rv1296;Parent=transcript:Rv1296;protein_id=Rv1296 ### -Chromosome ena gene 1453204 1455012 . + . ID=gene:Rv1297;Name=rho;biotype=protein_coding;description=Probable transcription termination factor Rho homolog;gene_id=Rv1297;logic_name=ena +Chromosome ena gene 1453204 1455012 . + . ID=gene:Rv1297;Name=rho;biotype=protein_coding;description=Probable transcription termination factor Rho homolog;gene_id=Rv1297;logic_name=ena Chromosome ena mRNA 1453204 1455012 . + . ID=transcript:Rv1297;Parent=gene:Rv1297;Name=rho-1;biotype=protein_coding;transcript_id=Rv1297 Chromosome ena exon 1453204 1455012 . + . Parent=transcript:Rv1297;Name=Rv1297-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1297-1;rank=1 Chromosome ena CDS 1453204 1455012 . + 0 ID=CDS:Rv1297;Parent=transcript:Rv1297;protein_id=Rv1297 ### -Chromosome ena gene 1455163 1455405 . + . ID=gene:Rv1298;Name=rpmE;biotype=protein_coding;description=50S ribosomal protein L31 RpmE;gene_id=Rv1298;logic_name=ena +Chromosome ena gene 1455163 1455405 . + . ID=gene:Rv1298;Name=rpmE;biotype=protein_coding;description=50S ribosomal protein L31 RpmE;gene_id=Rv1298;logic_name=ena Chromosome ena mRNA 1455163 1455405 . + . ID=transcript:Rv1298;Parent=gene:Rv1298;Name=rpmE-1;biotype=protein_coding;transcript_id=Rv1298 Chromosome ena exon 1455163 1455405 . + . Parent=transcript:Rv1298;Name=Rv1298-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1298-1;rank=1 Chromosome ena CDS 1455163 1455405 . + 0 ID=CDS:Rv1298;Parent=transcript:Rv1298;protein_id=Rv1298 ### -Chromosome ena gene 1455495 1456568 . + . ID=gene:Rv1299;Name=prfA;biotype=protein_coding;description=Probable peptide chain release factor 1 PrfA (RF-1);gene_id=Rv1299;logic_name=ena +Chromosome ena gene 1455495 1456568 . + . ID=gene:Rv1299;Name=prfA;biotype=protein_coding;description=Probable peptide chain release factor 1 PrfA (RF-1);gene_id=Rv1299;logic_name=ena Chromosome ena mRNA 1455495 1456568 . + . ID=transcript:Rv1299;Parent=gene:Rv1299;Name=prfA-1;biotype=protein_coding;transcript_id=Rv1299 Chromosome ena exon 1455495 1456568 . + . Parent=transcript:Rv1299;Name=Rv1299-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1299-1;rank=1 Chromosome ena CDS 1455495 1456568 . + 0 ID=CDS:Rv1299;Parent=transcript:Rv1299;protein_id=Rv1299 ### -Chromosome ena gene 1456565 1457542 . + . ID=gene:Rv1300;Name=hemK;biotype=protein_coding;description=Probable HemK protein homolog HemK;gene_id=Rv1300;logic_name=ena +Chromosome ena gene 1456565 1457542 . + . ID=gene:Rv1300;Name=hemK;biotype=protein_coding;description=Probable HemK protein homolog HemK;gene_id=Rv1300;logic_name=ena Chromosome ena mRNA 1456565 1457542 . + . ID=transcript:Rv1300;Parent=gene:Rv1300;Name=hemK-1;biotype=protein_coding;transcript_id=Rv1300 Chromosome ena exon 1456565 1457542 . + . Parent=transcript:Rv1300;Name=Rv1300-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1300-1;rank=1 Chromosome ena CDS 1456565 1457542 . + 0 ID=CDS:Rv1300;Parent=transcript:Rv1300;protein_id=Rv1300 ### -Chromosome ena gene 1457558 1458211 . + . ID=gene:Rv1301;biotype=protein_coding;description=Conserved protein;gene_id=Rv1301;logic_name=ena +Chromosome ena gene 1457558 1458211 . + . ID=gene:Rv1301;biotype=protein_coding;description=Conserved protein;gene_id=Rv1301;logic_name=ena Chromosome ena mRNA 1457558 1458211 . + . ID=transcript:Rv1301;Parent=gene:Rv1301;biotype=protein_coding;transcript_id=Rv1301 Chromosome ena exon 1457558 1458211 . + . Parent=transcript:Rv1301;Name=Rv1301-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1301-1;rank=1 Chromosome ena CDS 1457558 1458211 . + 0 ID=CDS:Rv1301;Parent=transcript:Rv1301;protein_id=Rv1301 ### -Chromosome ena gene 1458295 1459509 . + . ID=gene:Rv1302;Name=rfe;biotype=protein_coding;description=Probable undecapaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe (UDP-GlcNAc transferase);gene_id=Rv1302;logic_name=ena +Chromosome ena gene 1458295 1459509 . + . ID=gene:Rv1302;Name=rfe;biotype=protein_coding;description=Probable undecapaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe (UDP-GlcNAc transferase);gene_id=Rv1302;logic_name=ena Chromosome ena mRNA 1458295 1459509 . + . ID=transcript:Rv1302;Parent=gene:Rv1302;Name=rfe-1;biotype=protein_coding;transcript_id=Rv1302 Chromosome ena exon 1458295 1459509 . + . Parent=transcript:Rv1302;Name=Rv1302-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1302-1;rank=1 Chromosome ena CDS 1458295 1459509 . + 0 ID=CDS:Rv1302;Parent=transcript:Rv1302;protein_id=Rv1302 ### -Chromosome ena gene 1459766 1460251 . + . ID=gene:Rv1303;biotype=protein_coding;description=Conserved hypothetical transmembrane protein;gene_id=Rv1303;logic_name=ena +Chromosome ena gene 1459766 1460251 . + . ID=gene:Rv1303;biotype=protein_coding;description=Conserved hypothetical transmembrane protein;gene_id=Rv1303;logic_name=ena Chromosome ena mRNA 1459766 1460251 . + . ID=transcript:Rv1303;Parent=gene:Rv1303;biotype=protein_coding;transcript_id=Rv1303 Chromosome ena exon 1459766 1460251 . + . Parent=transcript:Rv1303;Name=Rv1303-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1303-1;rank=1 Chromosome ena CDS 1459766 1460251 . + 0 ID=CDS:Rv1303;Parent=transcript:Rv1303;protein_id=Rv1303 ### -Chromosome ena gene 1460244 1460996 . + . ID=gene:Rv1304;Name=atpB;biotype=protein_coding;description=Probable ATP synthase a chain AtpB (protein 6);gene_id=Rv1304;logic_name=ena +Chromosome ena gene 1460244 1460996 . + . ID=gene:Rv1304;Name=atpB;biotype=protein_coding;description=Probable ATP synthase a chain AtpB (protein 6);gene_id=Rv1304;logic_name=ena Chromosome ena mRNA 1460244 1460996 . + . ID=transcript:Rv1304;Parent=gene:Rv1304;Name=atpB-1;biotype=protein_coding;transcript_id=Rv1304 Chromosome ena exon 1460244 1460996 . + . Parent=transcript:Rv1304;Name=Rv1304-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1304-1;rank=1 Chromosome ena CDS 1460244 1460996 . + 0 ID=CDS:Rv1304;Parent=transcript:Rv1304;protein_id=Rv1304 ### -Chromosome ena gene 1461045 1461290 . + . ID=gene:Rv1305;Name=atpE;biotype=protein_coding;description=Probable ATP synthase C chain AtpE (lipid-binding protein) (dicyclohexylcarbodiimide-binding protein);gene_id=Rv1305;logic_name=ena +Chromosome ena gene 1461045 1461290 . + . ID=gene:Rv1305;Name=atpE;biotype=protein_coding;description=Probable ATP synthase C chain AtpE (lipid-binding protein) (dicyclohexylcarbodiimide-binding protein);gene_id=Rv1305;logic_name=ena Chromosome ena mRNA 1461045 1461290 . + . ID=transcript:Rv1305;Parent=gene:Rv1305;Name=atpE-1;biotype=protein_coding;transcript_id=Rv1305 Chromosome ena exon 1461045 1461290 . + . Parent=transcript:Rv1305;Name=Rv1305-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1305-1;rank=1 Chromosome ena CDS 1461045 1461290 . + 0 ID=CDS:Rv1305;Parent=transcript:Rv1305;protein_id=Rv1305 ### -Chromosome ena gene 1461321 1461836 . + . ID=gene:Rv1306;Name=atpF;biotype=protein_coding;description=Probable ATP synthase B chain AtpF;gene_id=Rv1306;logic_name=ena +Chromosome ena gene 1461321 1461836 . + . ID=gene:Rv1306;Name=atpF;biotype=protein_coding;description=Probable ATP synthase B chain AtpF;gene_id=Rv1306;logic_name=ena Chromosome ena mRNA 1461321 1461836 . + . ID=transcript:Rv1306;Parent=gene:Rv1306;Name=atpF-1;biotype=protein_coding;transcript_id=Rv1306 Chromosome ena exon 1461321 1461836 . + . Parent=transcript:Rv1306;Name=Rv1306-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1306-1;rank=1 Chromosome ena CDS 1461321 1461836 . + 0 ID=CDS:Rv1306;Parent=transcript:Rv1306;protein_id=Rv1306 ### -Chromosome ena gene 1461843 1463183 . + . ID=gene:Rv1307;Name=atpH;biotype=protein_coding;description=Probable ATP synthase delta chain AtpH;gene_id=Rv1307;logic_name=ena +Chromosome ena gene 1461843 1463183 . + . ID=gene:Rv1307;Name=atpH;biotype=protein_coding;description=Probable ATP synthase delta chain AtpH;gene_id=Rv1307;logic_name=ena Chromosome ena mRNA 1461843 1463183 . + . ID=transcript:Rv1307;Parent=gene:Rv1307;Name=atpH-1;biotype=protein_coding;transcript_id=Rv1307 Chromosome ena exon 1461843 1463183 . + . Parent=transcript:Rv1307;Name=Rv1307-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1307-1;rank=1 Chromosome ena CDS 1461843 1463183 . + 0 ID=CDS:Rv1307;Parent=transcript:Rv1307;protein_id=Rv1307 ### -Chromosome ena gene 1463228 1464877 . + . ID=gene:Rv1308;Name=atpA;biotype=protein_coding;description=Probable ATP synthase alpha chain AtpA;gene_id=Rv1308;logic_name=ena +Chromosome ena gene 1463228 1464877 . + . ID=gene:Rv1308;Name=atpA;biotype=protein_coding;description=Probable ATP synthase alpha chain AtpA;gene_id=Rv1308;logic_name=ena Chromosome ena mRNA 1463228 1464877 . + . ID=transcript:Rv1308;Parent=gene:Rv1308;Name=atpA-1;biotype=protein_coding;transcript_id=Rv1308 Chromosome ena exon 1463228 1464877 . + . Parent=transcript:Rv1308;Name=Rv1308-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1308-1;rank=1 Chromosome ena CDS 1463228 1464877 . + 0 ID=CDS:Rv1308;Parent=transcript:Rv1308;protein_id=Rv1308 ### -Chromosome ena gene 1464884 1465801 . + . ID=gene:Rv1309;Name=atpG;biotype=protein_coding;description=Probable ATP synthase gamma chain AtpG;gene_id=Rv1309;logic_name=ena +Chromosome ena gene 1464884 1465801 . + . ID=gene:Rv1309;Name=atpG;biotype=protein_coding;description=Probable ATP synthase gamma chain AtpG;gene_id=Rv1309;logic_name=ena Chromosome ena mRNA 1464884 1465801 . + . ID=transcript:Rv1309;Parent=gene:Rv1309;Name=atpG-1;biotype=protein_coding;transcript_id=Rv1309 Chromosome ena exon 1464884 1465801 . + . Parent=transcript:Rv1309;Name=Rv1309-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1309-1;rank=1 Chromosome ena CDS 1464884 1465801 . + 0 ID=CDS:Rv1309;Parent=transcript:Rv1309;protein_id=Rv1309 ### -Chromosome ena gene 1465841 1467301 . + . ID=gene:Rv1310;Name=atpD;biotype=protein_coding;description=Probable ATP synthase beta chain AtpD;gene_id=Rv1310;logic_name=ena +Chromosome ena gene 1465841 1467301 . + . ID=gene:Rv1310;Name=atpD;biotype=protein_coding;description=Probable ATP synthase beta chain AtpD;gene_id=Rv1310;logic_name=ena Chromosome ena mRNA 1465841 1467301 . + . ID=transcript:Rv1310;Parent=gene:Rv1310;Name=atpD-1;biotype=protein_coding;transcript_id=Rv1310 Chromosome ena exon 1465841 1467301 . + . Parent=transcript:Rv1310;Name=Rv1310-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1310-1;rank=1 Chromosome ena CDS 1465841 1467301 . + 0 ID=CDS:Rv1310;Parent=transcript:Rv1310;protein_id=Rv1310 ### -Chromosome ena gene 1467315 1467680 . + . ID=gene:Rv1311;Name=atpC;biotype=protein_coding;description=Probable ATP synthase epsilon chain AtpC;gene_id=Rv1311;logic_name=ena +Chromosome ena gene 1467315 1467680 . + . ID=gene:Rv1311;Name=atpC;biotype=protein_coding;description=Probable ATP synthase epsilon chain AtpC;gene_id=Rv1311;logic_name=ena Chromosome ena mRNA 1467315 1467680 . + . ID=transcript:Rv1311;Parent=gene:Rv1311;Name=atpC-1;biotype=protein_coding;transcript_id=Rv1311 Chromosome ena exon 1467315 1467680 . + . Parent=transcript:Rv1311;Name=Rv1311-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1311-1;rank=1 Chromosome ena CDS 1467315 1467680 . + 0 ID=CDS:Rv1311;Parent=transcript:Rv1311;protein_id=Rv1311 ### -Chromosome ena gene 1467688 1468131 . + . ID=gene:Rv1312;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1312;logic_name=ena +Chromosome ena gene 1467688 1468131 . + . ID=gene:Rv1312;biotype=protein_coding;description=Conserved hypothetical secreted protein;gene_id=Rv1312;logic_name=ena Chromosome ena mRNA 1467688 1468131 . + . ID=transcript:Rv1312;Parent=gene:Rv1312;biotype=protein_coding;transcript_id=Rv1312 Chromosome ena exon 1467688 1468131 . + . Parent=transcript:Rv1312;Name=Rv1312-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1312-1;rank=1 Chromosome ena CDS 1467688 1468131 . + 0 ID=CDS:Rv1312;Parent=transcript:Rv1312;protein_id=Rv1312 ### -Chromosome ena_mobile_element biological_region 1468143 1469651 . - . external_name=IS1557-2%2C len: 1509 nt. Insertion sequence IS1557.;logic_name=ena_mobile_element -Chromosome ena gene 1468171 1469505 . - . ID=gene:Rv1313c;biotype=protein_coding;description=Possible transposase;gene_id=Rv1313c;logic_name=ena +Chromosome ena_mobile_element biological_region 1468143 1469651 . - . external_name=IS1557-2%2C len: 1509 nt. Insertion sequence IS1557.;logic_name=ena_mobile_element +Chromosome ena gene 1468171 1469505 . - . ID=gene:Rv1313c;biotype=protein_coding;description=Possible transposase;gene_id=Rv1313c;logic_name=ena Chromosome ena mRNA 1468171 1469505 . - . ID=transcript:Rv1313c;Parent=gene:Rv1313c;biotype=protein_coding;transcript_id=Rv1313c Chromosome ena exon 1468171 1469505 . - . Parent=transcript:Rv1313c;Name=Rv1313c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1313c-1;rank=1 Chromosome ena CDS 1468171 1469505 . - 0 ID=CDS:Rv1313c;Parent=transcript:Rv1313c;protein_id=Rv1313c ### -Chromosome ena gene 1469671 1470252 . - . ID=gene:Rv1314c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1314c;logic_name=ena +Chromosome ena gene 1469671 1470252 . - . ID=gene:Rv1314c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1314c;logic_name=ena Chromosome ena mRNA 1469671 1470252 . - . ID=transcript:Rv1314c;Parent=gene:Rv1314c;biotype=protein_coding;transcript_id=Rv1314c Chromosome ena exon 1469671 1470252 . - . Parent=transcript:Rv1314c;Name=Rv1314c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1314c-1;rank=1 Chromosome ena CDS 1469671 1470252 . - 0 ID=CDS:Rv1314c;Parent=transcript:Rv1314c;protein_id=Rv1314c ### -Chromosome ena gene 1470321 1471577 . + . ID=gene:Rv1315;Name=murA;biotype=protein_coding;description=Probable UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA;gene_id=Rv1315;logic_name=ena +Chromosome ena gene 1470321 1471577 . + . ID=gene:Rv1315;Name=murA;biotype=protein_coding;description=Probable UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA;gene_id=Rv1315;logic_name=ena Chromosome ena mRNA 1470321 1471577 . + . ID=transcript:Rv1315;Parent=gene:Rv1315;Name=murA-1;biotype=protein_coding;transcript_id=Rv1315 Chromosome ena exon 1470321 1471577 . + . Parent=transcript:Rv1315;Name=Rv1315-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1315-1;rank=1 Chromosome ena CDS 1470321 1471577 . + 0 ID=CDS:Rv1315;Parent=transcript:Rv1315;protein_id=Rv1315 @@ -6928,167 +6928,167 @@ Chromosome ena rRNA 1476899 1477013 . + . ID=transcript:EBG00000313349;Parent=ge Chromosome ena exon 1476899 1477013 . + . Parent=transcript:EBG00000313349;Name=EBG00000313349;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313349;rank=1 ### Chromosome ena_gene biological_region 1476899 1477013 . + . external_name=AL123456.3:gene:1476899..1477013;logic_name=ena_gene -Chromosome ena gene 1477134 1477631 . - . ID=gene:Rv1316c;Name=ogt;biotype=protein_coding;description=Methylated-DNA--protein-cysteine methyltransferase Ogt (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase);gene_id=Rv1316c;logic_name=ena +Chromosome ena gene 1477134 1477631 . - . ID=gene:Rv1316c;Name=ogt;biotype=protein_coding;description=Methylated-DNA--protein-cysteine methyltransferase Ogt (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase);gene_id=Rv1316c;logic_name=ena Chromosome ena mRNA 1477134 1477631 . - . ID=transcript:Rv1316c;Parent=gene:Rv1316c;Name=ogt-1;biotype=protein_coding;transcript_id=Rv1316c Chromosome ena exon 1477134 1477631 . - . Parent=transcript:Rv1316c;Name=Rv1316c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1316c-1;rank=1 Chromosome ena CDS 1477134 1477631 . - 0 ID=CDS:Rv1316c;Parent=transcript:Rv1316c;protein_id=Rv1316c ### -Chromosome ena gene 1477628 1479118 . - . ID=gene:Rv1317c;Name=alkA;biotype=protein_coding;description=Probable bifunctional regulatory protein and DNA repair enzyme AlkA (regulatory protein of adaptative response) (methylphosphotriester-DNA--protein-cysteine S-methyltransferase);gene_id=Rv1317c;logic_name=ena +Chromosome ena gene 1477628 1479118 . - . ID=gene:Rv1317c;Name=alkA;biotype=protein_coding;description=Probable bifunctional regulatory protein and DNA repair enzyme AlkA (regulatory protein of adaptative response) (methylphosphotriester-DNA--protein-cysteine S-methyltransferase);gene_id=Rv1317c;logic_name=ena Chromosome ena mRNA 1477628 1479118 . - . ID=transcript:Rv1317c;Parent=gene:Rv1317c;Name=alkA-1;biotype=protein_coding;transcript_id=Rv1317c Chromosome ena exon 1477628 1479118 . - . Parent=transcript:Rv1317c;Name=Rv1317c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1317c-1;rank=1 Chromosome ena CDS 1477628 1479118 . - 0 ID=CDS:Rv1317c;Parent=transcript:Rv1317c;protein_id=Rv1317c ### -Chromosome ena gene 1479199 1480824 . - . ID=gene:Rv1318c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1318c;logic_name=ena +Chromosome ena gene 1479199 1480824 . - . ID=gene:Rv1318c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1318c;logic_name=ena Chromosome ena mRNA 1479199 1480824 . - . ID=transcript:Rv1318c;Parent=gene:Rv1318c;biotype=protein_coding;transcript_id=Rv1318c Chromosome ena exon 1479199 1480824 . - . Parent=transcript:Rv1318c;Name=Rv1318c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1318c-1;rank=1 Chromosome ena CDS 1479199 1480824 . - 0 ID=CDS:Rv1318c;Parent=transcript:Rv1318c;protein_id=Rv1318c ### -Chromosome ena gene 1480894 1482501 . - . ID=gene:Rv1319c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1319c;logic_name=ena +Chromosome ena gene 1480894 1482501 . - . ID=gene:Rv1319c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1319c;logic_name=ena Chromosome ena mRNA 1480894 1482501 . - . ID=transcript:Rv1319c;Parent=gene:Rv1319c;biotype=protein_coding;transcript_id=Rv1319c Chromosome ena exon 1480894 1482501 . - . Parent=transcript:Rv1319c;Name=Rv1319c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1319c-1;rank=1 Chromosome ena CDS 1480894 1482501 . - 0 ID=CDS:Rv1319c;Parent=transcript:Rv1319c;protein_id=Rv1319c ### -Chromosome ena gene 1482514 1484217 . - . ID=gene:Rv1320c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1320c;logic_name=ena +Chromosome ena gene 1482514 1484217 . - . ID=gene:Rv1320c;biotype=protein_coding;description=Possible adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1320c;logic_name=ena Chromosome ena mRNA 1482514 1484217 . - . ID=transcript:Rv1320c;Parent=gene:Rv1320c;biotype=protein_coding;transcript_id=Rv1320c Chromosome ena exon 1482514 1484217 . - . Parent=transcript:Rv1320c;Name=Rv1320c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1320c-1;rank=1 Chromosome ena CDS 1482514 1484217 . - 0 ID=CDS:Rv1320c;Parent=transcript:Rv1320c;protein_id=Rv1320c ### -Chromosome ena gene 1484279 1484959 . + . ID=gene:Rv1321;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1321;logic_name=ena +Chromosome ena gene 1484279 1484959 . + . ID=gene:Rv1321;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1321;logic_name=ena Chromosome ena mRNA 1484279 1484959 . + . ID=transcript:Rv1321;Parent=gene:Rv1321;biotype=protein_coding;transcript_id=Rv1321 Chromosome ena exon 1484279 1484959 . + . Parent=transcript:Rv1321;Name=Rv1321-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1321-1;rank=1 Chromosome ena CDS 1484279 1484959 . + 0 ID=CDS:Rv1321;Parent=transcript:Rv1321;protein_id=Rv1321 ### -Chromosome ena gene 1484982 1485278 . + . ID=gene:Rv1322;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1322;logic_name=ena +Chromosome ena gene 1484982 1485278 . + . ID=gene:Rv1322;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1322;logic_name=ena Chromosome ena mRNA 1484982 1485278 . + . ID=transcript:Rv1322;Parent=gene:Rv1322;biotype=protein_coding;transcript_id=Rv1322 Chromosome ena exon 1484982 1485278 . + . Parent=transcript:Rv1322;Name=Rv1322-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1322-1;rank=1 Chromosome ena CDS 1484982 1485278 . + 0 ID=CDS:Rv1322;Parent=transcript:Rv1322;protein_id=Rv1322 ### -Chromosome ena gene 1485313 1485771 . - . ID=gene:Rv1322A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1322A;logic_name=ena +Chromosome ena gene 1485313 1485771 . - . ID=gene:Rv1322A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1322A;logic_name=ena Chromosome ena mRNA 1485313 1485771 . - . ID=transcript:Rv1322A;Parent=gene:Rv1322A;biotype=protein_coding;transcript_id=Rv1322A Chromosome ena exon 1485313 1485771 . - . Parent=transcript:Rv1322A;Name=Rv1322A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1322A-1;rank=1 Chromosome ena CDS 1485313 1485771 . - 0 ID=CDS:Rv1322A;Parent=transcript:Rv1322A;protein_id=Rv1322A ### -Chromosome ena gene 1485862 1487031 . + . ID=gene:Rv1323;Name=fadA4;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA4 (acetoacetyl-CoA thiolase);gene_id=Rv1323;logic_name=ena +Chromosome ena gene 1485862 1487031 . + . ID=gene:Rv1323;Name=fadA4;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA4 (acetoacetyl-CoA thiolase);gene_id=Rv1323;logic_name=ena Chromosome ena mRNA 1485862 1487031 . + . ID=transcript:Rv1323;Parent=gene:Rv1323;Name=fadA4-1;biotype=protein_coding;transcript_id=Rv1323 Chromosome ena exon 1485862 1487031 . + . Parent=transcript:Rv1323;Name=Rv1323-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1323-1;rank=1 Chromosome ena CDS 1485862 1487031 . + 0 ID=CDS:Rv1323;Parent=transcript:Rv1323;protein_id=Rv1323 ### -Chromosome ena gene 1487161 1488075 . + . ID=gene:Rv1324;biotype=protein_coding;description=Possible thioredoxin;gene_id=Rv1324;logic_name=ena +Chromosome ena gene 1487161 1488075 . + . ID=gene:Rv1324;biotype=protein_coding;description=Possible thioredoxin;gene_id=Rv1324;logic_name=ena Chromosome ena mRNA 1487161 1488075 . + . ID=transcript:Rv1324;Parent=gene:Rv1324;biotype=protein_coding;transcript_id=Rv1324 Chromosome ena exon 1487161 1488075 . + . Parent=transcript:Rv1324;Name=Rv1324-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1324-1;rank=1 Chromosome ena CDS 1487161 1488075 . + 0 ID=CDS:Rv1324;Parent=transcript:Rv1324;protein_id=Rv1324 ### -Chromosome ena gene 1488154 1489965 . - . ID=gene:Rv1325c;Name=PE_PGRS24;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS24;gene_id=Rv1325c;logic_name=ena +Chromosome ena gene 1488154 1489965 . - . ID=gene:Rv1325c;Name=PE_PGRS24;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS24;gene_id=Rv1325c;logic_name=ena Chromosome ena mRNA 1488154 1489965 . - . ID=transcript:Rv1325c;Parent=gene:Rv1325c;Name=PE_PGRS24-1;biotype=protein_coding;transcript_id=Rv1325c Chromosome ena exon 1488154 1489965 . - . Parent=transcript:Rv1325c;Name=Rv1325c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1325c-1;rank=1 Chromosome ena CDS 1488154 1489965 . - 0 ID=CDS:Rv1325c;Parent=transcript:Rv1325c;protein_id=Rv1325c ### -Chromosome ena gene 1490117 1492312 . - . ID=gene:Rv1326c;Name=glgB;biotype=protein_coding;description=1%2C4-alpha-glucan branching enzyme GlgB (glycogen branching enzyme);gene_id=Rv1326c;logic_name=ena +Chromosome ena gene 1490117 1492312 . - . ID=gene:Rv1326c;Name=glgB;biotype=protein_coding;description=1%2C4-alpha-glucan branching enzyme GlgB (glycogen branching enzyme);gene_id=Rv1326c;logic_name=ena Chromosome ena mRNA 1490117 1492312 . - . ID=transcript:Rv1326c;Parent=gene:Rv1326c;Name=glgB-1;biotype=protein_coding;transcript_id=Rv1326c Chromosome ena exon 1490117 1492312 . - . Parent=transcript:Rv1326c;Name=Rv1326c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1326c-1;rank=1 Chromosome ena CDS 1490117 1492312 . - 0 ID=CDS:Rv1326c;Parent=transcript:Rv1326c;protein_id=Rv1326c ### -Chromosome ena gene 1492320 1494425 . - . ID=gene:Rv1327c;Name=glgE;biotype=protein_coding;description=Probable glucanase GlgE;gene_id=Rv1327c;logic_name=ena +Chromosome ena gene 1492320 1494425 . - . ID=gene:Rv1327c;Name=glgE;biotype=protein_coding;description=Probable glucanase GlgE;gene_id=Rv1327c;logic_name=ena Chromosome ena mRNA 1492320 1494425 . - . ID=transcript:Rv1327c;Parent=gene:Rv1327c;Name=glgE-1;biotype=protein_coding;transcript_id=Rv1327c Chromosome ena exon 1492320 1494425 . - . Parent=transcript:Rv1327c;Name=Rv1327c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1327c-1;rank=1 Chromosome ena CDS 1492320 1494425 . - 0 ID=CDS:Rv1327c;Parent=transcript:Rv1327c;protein_id=Rv1327c ### -Chromosome ena gene 1494564 1497155 . + . ID=gene:Rv1328;Name=glgP;biotype=protein_coding;description=Probable glycogen phosphorylase GlgP;gene_id=Rv1328;logic_name=ena +Chromosome ena gene 1494564 1497155 . + . ID=gene:Rv1328;Name=glgP;biotype=protein_coding;description=Probable glycogen phosphorylase GlgP;gene_id=Rv1328;logic_name=ena Chromosome ena mRNA 1494564 1497155 . + . ID=transcript:Rv1328;Parent=gene:Rv1328;Name=glgP-1;biotype=protein_coding;transcript_id=Rv1328 Chromosome ena exon 1494564 1497155 . + . Parent=transcript:Rv1328;Name=Rv1328-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1328-1;rank=1 Chromosome ena CDS 1494564 1497155 . + 0 ID=CDS:Rv1328;Parent=transcript:Rv1328;protein_id=Rv1328 ### -Chromosome ena gene 1497195 1499189 . - . ID=gene:Rv1329c;Name=dinG;biotype=protein_coding;description=Probable ATP-dependent helicase DinG;gene_id=Rv1329c;logic_name=ena +Chromosome ena gene 1497195 1499189 . - . ID=gene:Rv1329c;Name=dinG;biotype=protein_coding;description=Probable ATP-dependent helicase DinG;gene_id=Rv1329c;logic_name=ena Chromosome ena mRNA 1497195 1499189 . - . ID=transcript:Rv1329c;Parent=gene:Rv1329c;Name=dinG-1;biotype=protein_coding;transcript_id=Rv1329c Chromosome ena exon 1497195 1499189 . - . Parent=transcript:Rv1329c;Name=Rv1329c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1329c-1;rank=1 Chromosome ena CDS 1497195 1499189 . - 0 ID=CDS:Rv1329c;Parent=transcript:Rv1329c;protein_id=Rv1329c ### -Chromosome ena gene 1499213 1500559 . - . ID=gene:Rv1330c;Name=pncB1;biotype=protein_coding;description=Nicotinic acid phosphoribosyltransferase PncB1;gene_id=Rv1330c;logic_name=ena +Chromosome ena gene 1499213 1500559 . - . ID=gene:Rv1330c;Name=pncB1;biotype=protein_coding;description=Nicotinic acid phosphoribosyltransferase PncB1;gene_id=Rv1330c;logic_name=ena Chromosome ena mRNA 1499213 1500559 . - . ID=transcript:Rv1330c;Parent=gene:Rv1330c;Name=pncB1-1;biotype=protein_coding;transcript_id=Rv1330c Chromosome ena exon 1499213 1500559 . - . Parent=transcript:Rv1330c;Name=Rv1330c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1330c-1;rank=1 Chromosome ena CDS 1499213 1500559 . - 0 ID=CDS:Rv1330c;Parent=transcript:Rv1330c;protein_id=Rv1330c ### -Chromosome ena gene 1500661 1500966 . + . ID=gene:Rv1331;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1331;logic_name=ena +Chromosome ena gene 1500661 1500966 . + . ID=gene:Rv1331;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1331;logic_name=ena Chromosome ena mRNA 1500661 1500966 . + . ID=transcript:Rv1331;Parent=gene:Rv1331;biotype=protein_coding;transcript_id=Rv1331 Chromosome ena exon 1500661 1500966 . + . Parent=transcript:Rv1331;Name=Rv1331-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1331-1;rank=1 Chromosome ena CDS 1500661 1500966 . + 0 ID=CDS:Rv1331;Parent=transcript:Rv1331;protein_id=Rv1331 ### -Chromosome ena gene 1500926 1501582 . + . ID=gene:Rv1332;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1332;logic_name=ena +Chromosome ena gene 1500926 1501582 . + . ID=gene:Rv1332;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1332;logic_name=ena Chromosome ena mRNA 1500926 1501582 . + . ID=transcript:Rv1332;Parent=gene:Rv1332;biotype=protein_coding;transcript_id=Rv1332 Chromosome ena exon 1500926 1501582 . + . Parent=transcript:Rv1332;Name=Rv1332-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1332-1;rank=1 Chromosome ena CDS 1500926 1501582 . + 0 ID=CDS:Rv1332;Parent=transcript:Rv1332;protein_id=Rv1332 ### -Chromosome ena gene 1501599 1502633 . + . ID=gene:Rv1333;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1333;logic_name=ena +Chromosome ena gene 1501599 1502633 . + . ID=gene:Rv1333;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1333;logic_name=ena Chromosome ena mRNA 1501599 1502633 . + . ID=transcript:Rv1333;Parent=gene:Rv1333;biotype=protein_coding;transcript_id=Rv1333 Chromosome ena exon 1501599 1502633 . + . Parent=transcript:Rv1333;Name=Rv1333-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1333-1;rank=1 Chromosome ena CDS 1501599 1502633 . + 0 ID=CDS:Rv1333;Parent=transcript:Rv1333;protein_id=Rv1333 ### -Chromosome ena gene 1502641 1503081 . + . ID=gene:Rv1334;Name=mec;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv1334;logic_name=ena +Chromosome ena gene 1502641 1503081 . + . ID=gene:Rv1334;Name=mec;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv1334;logic_name=ena Chromosome ena mRNA 1502641 1503081 . + . ID=transcript:Rv1334;Parent=gene:Rv1334;Name=mec-1;biotype=protein_coding;transcript_id=Rv1334 Chromosome ena exon 1502641 1503081 . + . Parent=transcript:Rv1334;Name=Rv1334-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1334-1;rank=1 Chromosome ena CDS 1502641 1503081 . + 0 ID=CDS:Rv1334;Parent=transcript:Rv1334;protein_id=Rv1334 ### -Chromosome ena gene 1503103 1503384 . + . ID=gene:Rv1335;Name=cysO;biotype=protein_coding;description=Sulfur carrier protein CysO;gene_id=Rv1335;logic_name=ena +Chromosome ena gene 1503103 1503384 . + . ID=gene:Rv1335;Name=cysO;biotype=protein_coding;description=Sulfur carrier protein CysO;gene_id=Rv1335;logic_name=ena Chromosome ena mRNA 1503103 1503384 . + . ID=transcript:Rv1335;Parent=gene:Rv1335;Name=cysO-1;biotype=protein_coding;transcript_id=Rv1335 Chromosome ena exon 1503103 1503384 . + . Parent=transcript:Rv1335;Name=Rv1335-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1335-1;rank=1 Chromosome ena CDS 1503103 1503384 . + 0 ID=CDS:Rv1335;Parent=transcript:Rv1335;protein_id=Rv1335 ### -Chromosome ena gene 1503394 1504365 . + . ID=gene:Rv1336;Name=cysM;biotype=protein_coding;description=Cysteine synthase B CysM (CSASE B) (O-phosphoserine sulfhydrylase B) (O-phosphoserine (thiol)-lyase B);gene_id=Rv1336;logic_name=ena +Chromosome ena gene 1503394 1504365 . + . ID=gene:Rv1336;Name=cysM;biotype=protein_coding;description=Cysteine synthase B CysM (CSASE B) (O-phosphoserine sulfhydrylase B) (O-phosphoserine (thiol)-lyase B);gene_id=Rv1336;logic_name=ena Chromosome ena mRNA 1503394 1504365 . + . ID=transcript:Rv1336;Parent=gene:Rv1336;Name=cysM-1;biotype=protein_coding;transcript_id=Rv1336 Chromosome ena exon 1503394 1504365 . + . Parent=transcript:Rv1336;Name=Rv1336-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1336-1;rank=1 Chromosome ena CDS 1503394 1504365 . + 0 ID=CDS:Rv1336;Parent=transcript:Rv1336;protein_id=Rv1336 ### -Chromosome ena gene 1504356 1505078 . + . ID=gene:Rv1337;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1337;logic_name=ena +Chromosome ena gene 1504356 1505078 . + . ID=gene:Rv1337;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1337;logic_name=ena Chromosome ena mRNA 1504356 1505078 . + . ID=transcript:Rv1337;Parent=gene:Rv1337;biotype=protein_coding;transcript_id=Rv1337 Chromosome ena exon 1504356 1505078 . + . Parent=transcript:Rv1337;Name=Rv1337-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1337-1;rank=1 Chromosome ena CDS 1504356 1505078 . + 0 ID=CDS:Rv1337;Parent=transcript:Rv1337;protein_id=Rv1337 ### -Chromosome ena gene 1505075 1505890 . + . ID=gene:Rv1338;Name=murI;biotype=protein_coding;description=Probable glutamate racemase MurI;gene_id=Rv1338;logic_name=ena +Chromosome ena gene 1505075 1505890 . + . ID=gene:Rv1338;Name=murI;biotype=protein_coding;description=Probable glutamate racemase MurI;gene_id=Rv1338;logic_name=ena Chromosome ena mRNA 1505075 1505890 . + . ID=transcript:Rv1338;Parent=gene:Rv1338;Name=murI-1;biotype=protein_coding;transcript_id=Rv1338 Chromosome ena exon 1505075 1505890 . + . Parent=transcript:Rv1338;Name=Rv1338-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1338-1;rank=1 Chromosome ena CDS 1505075 1505890 . + 0 ID=CDS:Rv1338;Parent=transcript:Rv1338;protein_id=Rv1338 ### -Chromosome ena gene 1505917 1506738 . + . ID=gene:Rv1339;biotype=protein_coding;description=Conserved protein;gene_id=Rv1339;logic_name=ena +Chromosome ena gene 1505917 1506738 . + . ID=gene:Rv1339;biotype=protein_coding;description=Conserved protein;gene_id=Rv1339;logic_name=ena Chromosome ena mRNA 1505917 1506738 . + . ID=transcript:Rv1339;Parent=gene:Rv1339;biotype=protein_coding;transcript_id=Rv1339 Chromosome ena exon 1505917 1506738 . + . Parent=transcript:Rv1339;Name=Rv1339-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1339-1;rank=1 Chromosome ena CDS 1505917 1506738 . + 0 ID=CDS:Rv1339;Parent=transcript:Rv1339;protein_id=Rv1339 ### -Chromosome ena gene 1506755 1507534 . + . ID=gene:Rv1340;Name=rphA;biotype=protein_coding;description=Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase);gene_id=Rv1340;logic_name=ena +Chromosome ena gene 1506755 1507534 . + . ID=gene:Rv1340;Name=rphA;biotype=protein_coding;description=Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase);gene_id=Rv1340;logic_name=ena Chromosome ena mRNA 1506755 1507534 . + . ID=transcript:Rv1340;Parent=gene:Rv1340;Name=rphA-1;biotype=protein_coding;transcript_id=Rv1340 Chromosome ena exon 1506755 1507534 . + . Parent=transcript:Rv1340;Name=Rv1340-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1340-1;rank=1 Chromosome ena CDS 1506755 1507534 . + 0 ID=CDS:Rv1340;Parent=transcript:Rv1340;protein_id=Rv1340 ### -Chromosome ena gene 1507573 1508187 . + . ID=gene:Rv1341;biotype=protein_coding;description=Conserved protein;gene_id=Rv1341;logic_name=ena +Chromosome ena gene 1507573 1508187 . + . ID=gene:Rv1341;biotype=protein_coding;description=Conserved protein;gene_id=Rv1341;logic_name=ena Chromosome ena mRNA 1507573 1508187 . + . ID=transcript:Rv1341;Parent=gene:Rv1341;biotype=protein_coding;transcript_id=Rv1341 Chromosome ena exon 1507573 1508187 . + . Parent=transcript:Rv1341;Name=Rv1341-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1341-1;rank=1 Chromosome ena CDS 1507573 1508187 . + 0 ID=CDS:Rv1341;Parent=transcript:Rv1341;protein_id=Rv1341 ### -Chromosome ena gene 1508184 1508546 . - . ID=gene:Rv1342c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1342c;logic_name=ena +Chromosome ena gene 1508184 1508546 . - . ID=gene:Rv1342c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1342c;logic_name=ena Chromosome ena mRNA 1508184 1508546 . - . ID=transcript:Rv1342c;Parent=gene:Rv1342c;biotype=protein_coding;transcript_id=Rv1342c Chromosome ena exon 1508184 1508546 . - . Parent=transcript:Rv1342c;Name=Rv1342c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1342c-1;rank=1 Chromosome ena CDS 1508184 1508546 . - 0 ID=CDS:Rv1342c;Parent=transcript:Rv1342c;protein_id=Rv1342c ### -Chromosome ena gene 1508543 1508923 . - . ID=gene:Rv1343c;Name=lprD;biotype=protein_coding;description=Probable conserved lipoprotein LprD;gene_id=Rv1343c;logic_name=ena +Chromosome ena gene 1508543 1508923 . - . ID=gene:Rv1343c;Name=lprD;biotype=protein_coding;description=Probable conserved lipoprotein LprD;gene_id=Rv1343c;logic_name=ena Chromosome ena mRNA 1508543 1508923 . - . ID=transcript:Rv1343c;Parent=gene:Rv1343c;Name=lprD-1;biotype=protein_coding;transcript_id=Rv1343c Chromosome ena exon 1508543 1508923 . - . Parent=transcript:Rv1343c;Name=Rv1343c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1343c-1;rank=1 Chromosome ena CDS 1508543 1508923 . - 0 ID=CDS:Rv1343c;Parent=transcript:Rv1343c;protein_id=Rv1343c ### -Chromosome ena gene 1508968 1509288 . + . ID=gene:Rv1344;Name=mbtL;biotype=protein_coding;description=Acyl carrier protein (ACP) MbtL;gene_id=Rv1344;logic_name=ena +Chromosome ena gene 1508968 1509288 . + . ID=gene:Rv1344;Name=mbtL;biotype=protein_coding;description=Acyl carrier protein (ACP) MbtL;gene_id=Rv1344;logic_name=ena Chromosome ena mRNA 1508968 1509288 . + . ID=transcript:Rv1344;Parent=gene:Rv1344;Name=mbtL-1;biotype=protein_coding;transcript_id=Rv1344 Chromosome ena exon 1508968 1509288 . + . Parent=transcript:Rv1344;Name=Rv1344-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1344-1;rank=1 Chromosome ena CDS 1508968 1509288 . + 0 ID=CDS:Rv1344;Parent=transcript:Rv1344;protein_id=Rv1344 ### -Chromosome ena gene 1509281 1510846 . + . ID=gene:Rv1345;Name=mbtM;biotype=protein_coding;description=Probable fatty acyl-AMP ligase MbtM;gene_id=Rv1345;logic_name=ena +Chromosome ena gene 1509281 1510846 . + . ID=gene:Rv1345;Name=mbtM;biotype=protein_coding;description=Probable fatty acyl-AMP ligase MbtM;gene_id=Rv1345;logic_name=ena Chromosome ena mRNA 1509281 1510846 . + . ID=transcript:Rv1345;Parent=gene:Rv1345;Name=mbtM-1;biotype=protein_coding;transcript_id=Rv1345 Chromosome ena exon 1509281 1510846 . + . Parent=transcript:Rv1345;Name=Rv1345-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1345-1;rank=1 Chromosome ena CDS 1509281 1510846 . + 0 ID=CDS:Rv1345;Parent=transcript:Rv1345;protein_id=Rv1345 ### -Chromosome ena gene 1510846 1512006 . + . ID=gene:Rv1346;Name=mbtN;biotype=protein_coding;description=Acyl-CoA dehydrogenase MbtN;gene_id=Rv1346;logic_name=ena +Chromosome ena gene 1510846 1512006 . + . ID=gene:Rv1346;Name=mbtN;biotype=protein_coding;description=Acyl-CoA dehydrogenase MbtN;gene_id=Rv1346;logic_name=ena Chromosome ena mRNA 1510846 1512006 . + . ID=transcript:Rv1346;Parent=gene:Rv1346;Name=mbtN-1;biotype=protein_coding;transcript_id=Rv1346 Chromosome ena exon 1510846 1512006 . + . Parent=transcript:Rv1346;Name=Rv1346-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1346-1;rank=1 Chromosome ena CDS 1510846 1512006 . + 0 ID=CDS:Rv1346;Parent=transcript:Rv1346;protein_id=Rv1346 ### -Chromosome ena gene 1511973 1512605 . - . ID=gene:Rv1347c;Name=mbtK;biotype=protein_coding;description=Lysine N-acetyltransferase MbtK;gene_id=Rv1347c;logic_name=ena +Chromosome ena gene 1511973 1512605 . - . ID=gene:Rv1347c;Name=mbtK;biotype=protein_coding;description=Lysine N-acetyltransferase MbtK;gene_id=Rv1347c;logic_name=ena Chromosome ena mRNA 1511973 1512605 . - . ID=transcript:Rv1347c;Parent=gene:Rv1347c;Name=mbtK-1;biotype=protein_coding;transcript_id=Rv1347c Chromosome ena exon 1511973 1512605 . - . Parent=transcript:Rv1347c;Name=Rv1347c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1347c-1;rank=1 Chromosome ena CDS 1511973 1512605 . - 0 ID=CDS:Rv1347c;Parent=transcript:Rv1347c;protein_id=Rv1347c @@ -7098,82 +7098,82 @@ Chromosome ena transcript 1512728 1512811 . + . ID=transcript:EBG00000313360;Par Chromosome ena exon 1512728 1512811 . + . Parent=transcript:EBG00000313360;Name=EBG00000313360;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313360;rank=1 ### Chromosome ena_gene biological_region 1512728 1512811 . + . external_name=AL123456.3:gene:1512728..1512811;logic_name=ena_gene -Chromosome ena gene 1513047 1515626 . + . ID=gene:Rv1348;Name=irtA;biotype=protein_coding;description=Iron-regulated transporter IrtA;gene_id=Rv1348;logic_name=ena +Chromosome ena gene 1513047 1515626 . + . ID=gene:Rv1348;Name=irtA;biotype=protein_coding;description=Iron-regulated transporter IrtA;gene_id=Rv1348;logic_name=ena Chromosome ena mRNA 1513047 1515626 . + . ID=transcript:Rv1348;Parent=gene:Rv1348;Name=irtA-1;biotype=protein_coding;transcript_id=Rv1348 Chromosome ena exon 1513047 1515626 . + . Parent=transcript:Rv1348;Name=Rv1348-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1348-1;rank=1 Chromosome ena CDS 1513047 1515626 . + 0 ID=CDS:Rv1348;Parent=transcript:Rv1348;protein_id=Rv1348 ### -Chromosome ena gene 1515623 1517362 . + . ID=gene:Rv1349;Name=irtB;biotype=protein_coding;description=Iron-regulated transporter IrtB;gene_id=Rv1349;logic_name=ena +Chromosome ena gene 1515623 1517362 . + . ID=gene:Rv1349;Name=irtB;biotype=protein_coding;description=Iron-regulated transporter IrtB;gene_id=Rv1349;logic_name=ena Chromosome ena mRNA 1515623 1517362 . + . ID=transcript:Rv1349;Parent=gene:Rv1349;Name=irtB-1;biotype=protein_coding;transcript_id=Rv1349 Chromosome ena exon 1515623 1517362 . + . Parent=transcript:Rv1349;Name=Rv1349-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1349-1;rank=1 Chromosome ena CDS 1515623 1517362 . + 0 ID=CDS:Rv1349;Parent=transcript:Rv1349;protein_id=Rv1349 ### -Chromosome ena gene 1517491 1518234 . + . ID=gene:Rv1350;Name=fabG2;biotype=protein_coding;description=Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase);gene_id=Rv1350;logic_name=ena +Chromosome ena gene 1517491 1518234 . + . ID=gene:Rv1350;Name=fabG2;biotype=protein_coding;description=Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase);gene_id=Rv1350;logic_name=ena Chromosome ena mRNA 1517491 1518234 . + . ID=transcript:Rv1350;Parent=gene:Rv1350;Name=fabG2-1;biotype=protein_coding;transcript_id=Rv1350 Chromosome ena exon 1517491 1518234 . + . Parent=transcript:Rv1350;Name=Rv1350-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1350-1;rank=1 Chromosome ena CDS 1517491 1518234 . + 0 ID=CDS:Rv1350;Parent=transcript:Rv1350;protein_id=Rv1350 ### -Chromosome ena gene 1518231 1518560 . + . ID=gene:Rv1351;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1351;logic_name=ena +Chromosome ena gene 1518231 1518560 . + . ID=gene:Rv1351;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1351;logic_name=ena Chromosome ena mRNA 1518231 1518560 . + . ID=transcript:Rv1351;Parent=gene:Rv1351;biotype=protein_coding;transcript_id=Rv1351 Chromosome ena exon 1518231 1518560 . + . Parent=transcript:Rv1351;Name=Rv1351-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1351-1;rank=1 Chromosome ena CDS 1518231 1518560 . + 0 ID=CDS:Rv1351;Parent=transcript:Rv1351;protein_id=Rv1351 ### -Chromosome ena gene 1518763 1519134 . + . ID=gene:Rv1352;biotype=protein_coding;description=Conserved protein;gene_id=Rv1352;logic_name=ena +Chromosome ena gene 1518763 1519134 . + . ID=gene:Rv1352;biotype=protein_coding;description=Conserved protein;gene_id=Rv1352;logic_name=ena Chromosome ena mRNA 1518763 1519134 . + . ID=transcript:Rv1352;Parent=gene:Rv1352;biotype=protein_coding;transcript_id=Rv1352 Chromosome ena exon 1518763 1519134 . + . Parent=transcript:Rv1352;Name=Rv1352-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1352-1;rank=1 Chromosome ena CDS 1518763 1519134 . + 0 ID=CDS:Rv1352;Parent=transcript:Rv1352;protein_id=Rv1352 ### -Chromosome ena gene 1519200 1519985 . - . ID=gene:Rv1353c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1353c;logic_name=ena +Chromosome ena gene 1519200 1519985 . - . ID=gene:Rv1353c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1353c;logic_name=ena Chromosome ena mRNA 1519200 1519985 . - . ID=transcript:Rv1353c;Parent=gene:Rv1353c;biotype=protein_coding;transcript_id=Rv1353c Chromosome ena exon 1519200 1519985 . - . Parent=transcript:Rv1353c;Name=Rv1353c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1353c-1;rank=1 Chromosome ena CDS 1519200 1519985 . - 0 ID=CDS:Rv1353c;Parent=transcript:Rv1353c;protein_id=Rv1353c ### -Chromosome ena gene 1520005 1521876 . - . ID=gene:Rv1354c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1354c;logic_name=ena +Chromosome ena gene 1520005 1521876 . - . ID=gene:Rv1354c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1354c;logic_name=ena Chromosome ena mRNA 1520005 1521876 . - . ID=transcript:Rv1354c;Parent=gene:Rv1354c;biotype=protein_coding;transcript_id=Rv1354c Chromosome ena exon 1520005 1521876 . - . Parent=transcript:Rv1354c;Name=Rv1354c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1354c-1;rank=1 Chromosome ena CDS 1520005 1521876 . - 0 ID=CDS:Rv1354c;Parent=transcript:Rv1354c;protein_id=Rv1354c ### -Chromosome ena gene 1521885 1524032 . - . ID=gene:Rv1355c;Name=moeY;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeY;gene_id=Rv1355c;logic_name=ena +Chromosome ena gene 1521885 1524032 . - . ID=gene:Rv1355c;Name=moeY;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeY;gene_id=Rv1355c;logic_name=ena Chromosome ena mRNA 1521885 1524032 . - . ID=transcript:Rv1355c;Parent=gene:Rv1355c;Name=moeY-1;biotype=protein_coding;transcript_id=Rv1355c Chromosome ena exon 1521885 1524032 . - . Parent=transcript:Rv1355c;Name=Rv1355c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1355c-1;rank=1 Chromosome ena CDS 1521885 1524032 . - 0 ID=CDS:Rv1355c;Parent=transcript:Rv1355c;protein_id=Rv1355c ### -Chromosome ena gene 1524029 1524820 . - . ID=gene:Rv1356c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1356c;logic_name=ena +Chromosome ena gene 1524029 1524820 . - . ID=gene:Rv1356c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1356c;logic_name=ena Chromosome ena mRNA 1524029 1524820 . - . ID=transcript:Rv1356c;Parent=gene:Rv1356c;biotype=protein_coding;transcript_id=Rv1356c Chromosome ena exon 1524029 1524820 . - . Parent=transcript:Rv1356c;Name=Rv1356c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1356c-1;rank=1 Chromosome ena CDS 1524029 1524820 . - 0 ID=CDS:Rv1356c;Parent=transcript:Rv1356c;protein_id=Rv1356c ### -Chromosome ena gene 1525293 1526216 . - . ID=gene:Rv1357c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1357c;logic_name=ena +Chromosome ena gene 1525293 1526216 . - . ID=gene:Rv1357c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1357c;logic_name=ena Chromosome ena mRNA 1525293 1526216 . - . ID=transcript:Rv1357c;Parent=gene:Rv1357c;biotype=protein_coding;transcript_id=Rv1357c Chromosome ena exon 1525293 1526216 . - . Parent=transcript:Rv1357c;Name=Rv1357c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1357c-1;rank=1 Chromosome ena CDS 1525293 1526216 . - 0 ID=CDS:Rv1357c;Parent=transcript:Rv1357c;protein_id=Rv1357c ### -Chromosome ena gene 1526612 1530091 . + . ID=gene:Rv1358;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1358;logic_name=ena +Chromosome ena gene 1526612 1530091 . + . ID=gene:Rv1358;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1358;logic_name=ena Chromosome ena mRNA 1526612 1530091 . + . ID=transcript:Rv1358;Parent=gene:Rv1358;biotype=protein_coding;transcript_id=Rv1358 Chromosome ena exon 1526612 1530091 . + . Parent=transcript:Rv1358;Name=Rv1358-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1358-1;rank=1 Chromosome ena CDS 1526612 1530091 . + 0 ID=CDS:Rv1358;Parent=transcript:Rv1358;protein_id=Rv1358 ### -Chromosome ena gene 1530173 1530925 . + . ID=gene:Rv1359;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1359;logic_name=ena +Chromosome ena gene 1530173 1530925 . + . ID=gene:Rv1359;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1359;logic_name=ena Chromosome ena mRNA 1530173 1530925 . + . ID=transcript:Rv1359;Parent=gene:Rv1359;biotype=protein_coding;transcript_id=Rv1359 Chromosome ena exon 1530173 1530925 . + . Parent=transcript:Rv1359;Name=Rv1359-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1359-1;rank=1 Chromosome ena CDS 1530173 1530925 . + 0 ID=CDS:Rv1359;Parent=transcript:Rv1359;protein_id=Rv1359 ### -Chromosome ena gene 1531348 1532370 . + . ID=gene:Rv1360;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1360;logic_name=ena +Chromosome ena gene 1531348 1532370 . + . ID=gene:Rv1360;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1360;logic_name=ena Chromosome ena mRNA 1531348 1532370 . + . ID=transcript:Rv1360;Parent=gene:Rv1360;biotype=protein_coding;transcript_id=Rv1360 Chromosome ena exon 1531348 1532370 . + . Parent=transcript:Rv1360;Name=Rv1360-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1360-1;rank=1 Chromosome ena CDS 1531348 1532370 . + 0 ID=CDS:Rv1360;Parent=transcript:Rv1360;protein_id=Rv1360 ### -Chromosome ena gene 1532443 1533633 . - . ID=gene:Rv1361c;Name=PPE19;biotype=protein_coding;description=PPE family protein PPE19;gene_id=Rv1361c;logic_name=ena +Chromosome ena gene 1532443 1533633 . - . ID=gene:Rv1361c;Name=PPE19;biotype=protein_coding;description=PPE family protein PPE19;gene_id=Rv1361c;logic_name=ena Chromosome ena mRNA 1532443 1533633 . - . ID=transcript:Rv1361c;Parent=gene:Rv1361c;Name=PPE19-1;biotype=protein_coding;transcript_id=Rv1361c Chromosome ena exon 1532443 1533633 . - . Parent=transcript:Rv1361c;Name=Rv1361c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1361c-1;rank=1 Chromosome ena CDS 1532443 1533633 . - 0 ID=CDS:Rv1361c;Parent=transcript:Rv1361c;protein_id=Rv1361c ### -Chromosome ena gene 1533948 1534610 . - . ID=gene:Rv1362c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1362c;logic_name=ena +Chromosome ena gene 1533948 1534610 . - . ID=gene:Rv1362c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1362c;logic_name=ena Chromosome ena mRNA 1533948 1534610 . - . ID=transcript:Rv1362c;Parent=gene:Rv1362c;biotype=protein_coding;transcript_id=Rv1362c Chromosome ena exon 1533948 1534610 . - . Parent=transcript:Rv1362c;Name=Rv1362c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1362c-1;rank=1 Chromosome ena CDS 1533948 1534610 . - 0 ID=CDS:Rv1362c;Parent=transcript:Rv1362c;protein_id=Rv1362c ### -Chromosome ena gene 1534607 1535392 . - . ID=gene:Rv1363c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1363c;logic_name=ena +Chromosome ena gene 1534607 1535392 . - . ID=gene:Rv1363c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1363c;logic_name=ena Chromosome ena mRNA 1534607 1535392 . - . ID=transcript:Rv1363c;Parent=gene:Rv1363c;biotype=protein_coding;transcript_id=Rv1363c Chromosome ena exon 1534607 1535392 . - . Parent=transcript:Rv1363c;Name=Rv1363c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1363c-1;rank=1 Chromosome ena CDS 1534607 1535392 . - 0 ID=CDS:Rv1363c;Parent=transcript:Rv1363c;protein_id=Rv1363c @@ -7183,63 +7183,63 @@ Chromosome ena transcript 1535417 1535716 . - . ID=transcript:EBG00000313340;Par Chromosome ena exon 1535417 1535716 . - . Parent=transcript:EBG00000313340;Name=EBG00000313340;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313340;rank=1 ### Chromosome ena_gene biological_region 1535417 1535716 . - . external_name=AL123456.3:gene:complement(1535417..1535716);logic_name=ena_gene -Chromosome ena gene 1535683 1537644 . - . ID=gene:Rv1364c;biotype=protein_coding;description=Possible sigma factor regulatory protein;gene_id=Rv1364c;logic_name=ena +Chromosome ena gene 1535683 1537644 . - . ID=gene:Rv1364c;biotype=protein_coding;description=Possible sigma factor regulatory protein;gene_id=Rv1364c;logic_name=ena Chromosome ena mRNA 1535683 1537644 . - . ID=transcript:Rv1364c;Parent=gene:Rv1364c;biotype=protein_coding;transcript_id=Rv1364c Chromosome ena exon 1535683 1537644 . - . Parent=transcript:Rv1364c;Name=Rv1364c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1364c-1;rank=1 Chromosome ena CDS 1535683 1537644 . - 0 ID=CDS:Rv1364c;Parent=transcript:Rv1364c;protein_id=Rv1364c ### -Chromosome ena gene 1537783 1538169 . - . ID=gene:Rv1365c;Name=rsfA;biotype=protein_coding;description=Anti-anti-sigma factor RsfA (anti-sigma factor antagonist) (regulator of sigma F A);gene_id=Rv1365c;logic_name=ena +Chromosome ena gene 1537783 1538169 . - . ID=gene:Rv1365c;Name=rsfA;biotype=protein_coding;description=Anti-anti-sigma factor RsfA (anti-sigma factor antagonist) (regulator of sigma F A);gene_id=Rv1365c;logic_name=ena Chromosome ena mRNA 1537783 1538169 . - . ID=transcript:Rv1365c;Parent=gene:Rv1365c;Name=rsfA-1;biotype=protein_coding;transcript_id=Rv1365c Chromosome ena exon 1537783 1538169 . - . Parent=transcript:Rv1365c;Name=Rv1365c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1365c-1;rank=1 Chromosome ena CDS 1537783 1538169 . - 0 ID=CDS:Rv1365c;Parent=transcript:Rv1365c;protein_id=Rv1365c ### -Chromosome ena gene 1538390 1539211 . + . ID=gene:Rv1366;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1366;logic_name=ena +Chromosome ena gene 1538390 1539211 . + . ID=gene:Rv1366;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1366;logic_name=ena Chromosome ena mRNA 1538390 1539211 . + . ID=transcript:Rv1366;Parent=gene:Rv1366;biotype=protein_coding;transcript_id=Rv1366 Chromosome ena exon 1538390 1539211 . + . Parent=transcript:Rv1366;Name=Rv1366-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1366-1;rank=1 Chromosome ena CDS 1538390 1539211 . + 0 ID=CDS:Rv1366;Parent=transcript:Rv1366;protein_id=Rv1366 ### -Chromosome ena gene 1539180 1539440 . + . ID=gene:Rv1366A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1366A;logic_name=ena +Chromosome ena gene 1539180 1539440 . + . ID=gene:Rv1366A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1366A;logic_name=ena Chromosome ena mRNA 1539180 1539440 . + . ID=transcript:Rv1366A;Parent=gene:Rv1366A;biotype=protein_coding;transcript_id=Rv1366A Chromosome ena exon 1539180 1539440 . + . Parent=transcript:Rv1366A;Name=Rv1366A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1366A-1;rank=1 Chromosome ena CDS 1539180 1539440 . + 0 ID=CDS:Rv1366A;Parent=transcript:Rv1366A;protein_id=Rv1366A ### -Chromosome ena gene 1539512 1540645 . - . ID=gene:Rv1367c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1367c;logic_name=ena +Chromosome ena gene 1539512 1540645 . - . ID=gene:Rv1367c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1367c;logic_name=ena Chromosome ena mRNA 1539512 1540645 . - . ID=transcript:Rv1367c;Parent=gene:Rv1367c;biotype=protein_coding;transcript_id=Rv1367c Chromosome ena exon 1539512 1540645 . - . Parent=transcript:Rv1367c;Name=Rv1367c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1367c-1;rank=1 Chromosome ena CDS 1539512 1540645 . - 0 ID=CDS:Rv1367c;Parent=transcript:Rv1367c;protein_id=Rv1367c ### -Chromosome ena gene 1541020 1541805 . + . ID=gene:Rv1368;Name=lprF;biotype=protein_coding;description=Probable conserved lipoprotein LprF;gene_id=Rv1368;logic_name=ena +Chromosome ena gene 1541020 1541805 . + . ID=gene:Rv1368;Name=lprF;biotype=protein_coding;description=Probable conserved lipoprotein LprF;gene_id=Rv1368;logic_name=ena Chromosome ena mRNA 1541020 1541805 . + . ID=transcript:Rv1368;Parent=gene:Rv1368;Name=lprF-1;biotype=protein_coding;transcript_id=Rv1368 Chromosome ena exon 1541020 1541805 . + . Parent=transcript:Rv1368;Name=Rv1368-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1368-1;rank=1 Chromosome ena CDS 1541020 1541805 . + 0 ID=CDS:Rv1368;Parent=transcript:Rv1368;protein_id=Rv1368 ### -Chromosome ena_mobile_element biological_region 1541952 1543306 . - . external_name=IS6110-2%2C len: 1355 nt. Almost identical to Insertion sequence IS986 element.;logic_name=ena_mobile_element -Chromosome ena gene 1541994 1542980 . - . ID=gene:Rv1369c;biotype=protein_coding;description=Probable transposase;gene_id=Rv1369c;logic_name=ena +Chromosome ena_mobile_element biological_region 1541952 1543306 . - . external_name=IS6110-2%2C len: 1355 nt. Almost identical to Insertion sequence IS986 element.;logic_name=ena_mobile_element +Chromosome ena gene 1541994 1542980 . - . ID=gene:Rv1369c;biotype=protein_coding;description=Probable transposase;gene_id=Rv1369c;logic_name=ena Chromosome ena mRNA 1541994 1542980 . - . ID=transcript:Rv1369c;Parent=gene:Rv1369c;biotype=protein_coding;transcript_id=Rv1369c Chromosome ena exon 1541994 1542980 . - . Parent=transcript:Rv1369c;Name=Rv1369c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1369c-1;rank=1 Chromosome ena CDS 1541994 1542980 . - 0 ID=CDS:Rv1369c;Parent=transcript:Rv1369c;protein_id=Rv1369c ### -Chromosome ena gene 1542929 1543255 . - . ID=gene:Rv1370c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1370c;logic_name=ena +Chromosome ena gene 1542929 1543255 . - . ID=gene:Rv1370c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1370c;logic_name=ena Chromosome ena mRNA 1542929 1543255 . - . ID=transcript:Rv1370c;Parent=gene:Rv1370c;biotype=protein_coding;transcript_id=Rv1370c Chromosome ena exon 1542929 1543255 . - . Parent=transcript:Rv1370c;Name=Rv1370c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1370c-1;rank=1 Chromosome ena CDS 1542929 1543255 . - 0 ID=CDS:Rv1370c;Parent=transcript:Rv1370c;protein_id=Rv1370c ### -Chromosome ena gene 1543359 1544828 . + . ID=gene:Rv1371;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1371;logic_name=ena +Chromosome ena gene 1543359 1544828 . + . ID=gene:Rv1371;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1371;logic_name=ena Chromosome ena mRNA 1543359 1544828 . + . ID=transcript:Rv1371;Parent=gene:Rv1371;biotype=protein_coding;transcript_id=Rv1371 Chromosome ena exon 1543359 1544828 . + . Parent=transcript:Rv1371;Name=Rv1371-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1371-1;rank=1 Chromosome ena CDS 1543359 1544828 . + 0 ID=CDS:Rv1371;Parent=transcript:Rv1371;protein_id=Rv1371 ### -Chromosome ena gene 1544825 1546006 . + . ID=gene:Rv1372;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1372;logic_name=ena +Chromosome ena gene 1544825 1546006 . + . ID=gene:Rv1372;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1372;logic_name=ena Chromosome ena mRNA 1544825 1546006 . + . ID=transcript:Rv1372;Parent=gene:Rv1372;biotype=protein_coding;transcript_id=Rv1372 Chromosome ena exon 1544825 1546006 . + . Parent=transcript:Rv1372;Name=Rv1372-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1372-1;rank=1 Chromosome ena CDS 1544825 1546006 . + 0 ID=CDS:Rv1372;Parent=transcript:Rv1372;protein_id=Rv1372 ### -Chromosome ena gene 1546012 1546992 . + . ID=gene:Rv1373;biotype=protein_coding;description=Glycolipid sulfotransferase;gene_id=Rv1373;logic_name=ena +Chromosome ena gene 1546012 1546992 . + . ID=gene:Rv1373;biotype=protein_coding;description=Glycolipid sulfotransferase;gene_id=Rv1373;logic_name=ena Chromosome ena mRNA 1546012 1546992 . + . ID=transcript:Rv1373;Parent=gene:Rv1373;biotype=protein_coding;transcript_id=Rv1373 Chromosome ena exon 1546012 1546992 . + . Parent=transcript:Rv1373;Name=Rv1373-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1373-1;rank=1 Chromosome ena CDS 1546012 1546992 . + 0 ID=CDS:Rv1373;Parent=transcript:Rv1373;protein_id=Rv1373 ### -Chromosome ena gene 1547072 1547530 . - . ID=gene:Rv1374c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1374c;logic_name=ena +Chromosome ena gene 1547072 1547530 . - . ID=gene:Rv1374c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1374c;logic_name=ena Chromosome ena mRNA 1547072 1547530 . - . ID=transcript:Rv1374c;Parent=gene:Rv1374c;biotype=protein_coding;transcript_id=Rv1374c Chromosome ena exon 1547072 1547530 . - . Parent=transcript:Rv1374c;Name=Rv1374c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1374c-1;rank=1 Chromosome ena CDS 1547072 1547530 . - 0 ID=CDS:Rv1374c;Parent=transcript:Rv1374c;protein_id=Rv1374c @@ -7249,1282 +7249,1282 @@ Chromosome ena transcript 1547129 1547268 . + . ID=transcript:EBG00000313353;Par Chromosome ena exon 1547129 1547268 . + . Parent=transcript:EBG00000313353;Name=EBG00000313353;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313353;rank=1 ### Chromosome ena_gene biological_region 1547129 1547268 . + . external_name=AL123456.3:gene:1547129..1547268;logic_name=ena_gene -Chromosome ena gene 1547832 1549151 . + . ID=gene:Rv1375;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1375;logic_name=ena +Chromosome ena gene 1547832 1549151 . + . ID=gene:Rv1375;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1375;logic_name=ena Chromosome ena mRNA 1547832 1549151 . + . ID=transcript:Rv1375;Parent=gene:Rv1375;biotype=protein_coding;transcript_id=Rv1375 Chromosome ena exon 1547832 1549151 . + . Parent=transcript:Rv1375;Name=Rv1375-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1375-1;rank=1 Chromosome ena CDS 1547832 1549151 . + 0 ID=CDS:Rv1375;Parent=transcript:Rv1375;protein_id=Rv1375 ### -Chromosome ena gene 1549148 1550641 . + . ID=gene:Rv1376;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1376;logic_name=ena +Chromosome ena gene 1549148 1550641 . + . ID=gene:Rv1376;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1376;logic_name=ena Chromosome ena mRNA 1549148 1550641 . + . ID=transcript:Rv1376;Parent=gene:Rv1376;biotype=protein_coding;transcript_id=Rv1376 Chromosome ena exon 1549148 1550641 . + . Parent=transcript:Rv1376;Name=Rv1376-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1376-1;rank=1 Chromosome ena CDS 1549148 1550641 . + 0 ID=CDS:Rv1376;Parent=transcript:Rv1376;protein_id=Rv1376 ### -Chromosome ena gene 1550579 1551217 . - . ID=gene:Rv1377c;biotype=protein_coding;description=Putative transferase;gene_id=Rv1377c;logic_name=ena +Chromosome ena gene 1550579 1551217 . - . ID=gene:Rv1377c;biotype=protein_coding;description=Putative transferase;gene_id=Rv1377c;logic_name=ena Chromosome ena mRNA 1550579 1551217 . - . ID=transcript:Rv1377c;Parent=gene:Rv1377c;biotype=protein_coding;transcript_id=Rv1377c Chromosome ena exon 1550579 1551217 . - . Parent=transcript:Rv1377c;Name=Rv1377c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1377c-1;rank=1 Chromosome ena CDS 1550579 1551217 . - 0 ID=CDS:Rv1377c;Parent=transcript:Rv1377c;protein_id=Rv1377c ### -Chromosome ena gene 1551228 1552655 . - . ID=gene:Rv1378c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1378c;logic_name=ena +Chromosome ena gene 1551228 1552655 . - . ID=gene:Rv1378c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1378c;logic_name=ena Chromosome ena mRNA 1551228 1552655 . - . ID=transcript:Rv1378c;Parent=gene:Rv1378c;biotype=protein_coding;transcript_id=Rv1378c Chromosome ena exon 1551228 1552655 . - . Parent=transcript:Rv1378c;Name=Rv1378c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1378c-1;rank=1 Chromosome ena CDS 1551228 1552655 . - 0 ID=CDS:Rv1378c;Parent=transcript:Rv1378c;protein_id=Rv1378c ### -Chromosome ena gene 1552654 1553235 . + . ID=gene:Rv1379;Name=pyrR;biotype=protein_coding;description=Probable pyrimidine operon regulatory protein PyrR;gene_id=Rv1379;logic_name=ena +Chromosome ena gene 1552654 1553235 . + . ID=gene:Rv1379;Name=pyrR;biotype=protein_coding;description=Probable pyrimidine operon regulatory protein PyrR;gene_id=Rv1379;logic_name=ena Chromosome ena mRNA 1552654 1553235 . + . ID=transcript:Rv1379;Parent=gene:Rv1379;Name=pyrR-1;biotype=protein_coding;transcript_id=Rv1379 Chromosome ena exon 1552654 1553235 . + . Parent=transcript:Rv1379;Name=Rv1379-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1379-1;rank=1 Chromosome ena CDS 1552654 1553235 . + 0 ID=CDS:Rv1379;Parent=transcript:Rv1379;protein_id=Rv1379 ### -Chromosome ena gene 1553232 1554191 . + . ID=gene:Rv1380;Name=pyrB;biotype=protein_coding;description=Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase);gene_id=Rv1380;logic_name=ena +Chromosome ena gene 1553232 1554191 . + . ID=gene:Rv1380;Name=pyrB;biotype=protein_coding;description=Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase);gene_id=Rv1380;logic_name=ena Chromosome ena mRNA 1553232 1554191 . + . ID=transcript:Rv1380;Parent=gene:Rv1380;Name=pyrB-1;biotype=protein_coding;transcript_id=Rv1380 Chromosome ena exon 1553232 1554191 . + . Parent=transcript:Rv1380;Name=Rv1380-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1380-1;rank=1 Chromosome ena CDS 1553232 1554191 . + 0 ID=CDS:Rv1380;Parent=transcript:Rv1380;protein_id=Rv1380 ### -Chromosome ena gene 1554188 1555480 . + . ID=gene:Rv1381;Name=pyrC;biotype=protein_coding;description=Probable dihydroorotase PyrC (DHOase);gene_id=Rv1381;logic_name=ena +Chromosome ena gene 1554188 1555480 . + . ID=gene:Rv1381;Name=pyrC;biotype=protein_coding;description=Probable dihydroorotase PyrC (DHOase);gene_id=Rv1381;logic_name=ena Chromosome ena mRNA 1554188 1555480 . + . ID=transcript:Rv1381;Parent=gene:Rv1381;Name=pyrC-1;biotype=protein_coding;transcript_id=Rv1381 Chromosome ena exon 1554188 1555480 . + . Parent=transcript:Rv1381;Name=Rv1381-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1381-1;rank=1 Chromosome ena CDS 1554188 1555480 . + 0 ID=CDS:Rv1381;Parent=transcript:Rv1381;protein_id=Rv1381 ### -Chromosome ena gene 1555477 1555974 . + . ID=gene:Rv1382;biotype=protein_coding;description=Probable export or membrane protein;gene_id=Rv1382;logic_name=ena +Chromosome ena gene 1555477 1555974 . + . ID=gene:Rv1382;biotype=protein_coding;description=Probable export or membrane protein;gene_id=Rv1382;logic_name=ena Chromosome ena mRNA 1555477 1555974 . + . ID=transcript:Rv1382;Parent=gene:Rv1382;biotype=protein_coding;transcript_id=Rv1382 Chromosome ena exon 1555477 1555974 . + . Parent=transcript:Rv1382;Name=Rv1382-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1382-1;rank=1 Chromosome ena CDS 1555477 1555974 . + 0 ID=CDS:Rv1382;Parent=transcript:Rv1382;protein_id=Rv1382 ### -Chromosome ena gene 1555971 1557101 . + . ID=gene:Rv1383;Name=carA;biotype=protein_coding;description=Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain);gene_id=Rv1383;logic_name=ena +Chromosome ena gene 1555971 1557101 . + . ID=gene:Rv1383;Name=carA;biotype=protein_coding;description=Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain);gene_id=Rv1383;logic_name=ena Chromosome ena mRNA 1555971 1557101 . + . ID=transcript:Rv1383;Parent=gene:Rv1383;Name=carA-1;biotype=protein_coding;transcript_id=Rv1383 Chromosome ena exon 1555971 1557101 . + . Parent=transcript:Rv1383;Name=Rv1383-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1383-1;rank=1 Chromosome ena CDS 1555971 1557101 . + 0 ID=CDS:Rv1383;Parent=transcript:Rv1383;protein_id=Rv1383 ### -Chromosome ena gene 1557101 1560448 . + . ID=gene:Rv1384;Name=carB;biotype=protein_coding;description=Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain);gene_id=Rv1384;logic_name=ena +Chromosome ena gene 1557101 1560448 . + . ID=gene:Rv1384;Name=carB;biotype=protein_coding;description=Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain);gene_id=Rv1384;logic_name=ena Chromosome ena mRNA 1557101 1560448 . + . ID=transcript:Rv1384;Parent=gene:Rv1384;Name=carB-1;biotype=protein_coding;transcript_id=Rv1384 Chromosome ena exon 1557101 1560448 . + . Parent=transcript:Rv1384;Name=Rv1384-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1384-1;rank=1 Chromosome ena CDS 1557101 1560448 . + 0 ID=CDS:Rv1384;Parent=transcript:Rv1384;protein_id=Rv1384 ### -Chromosome ena gene 1560445 1561269 . + . ID=gene:Rv1385;Name=pyrF;biotype=protein_coding;description=Probable orotidine 5'-phosphate decarboxylase PyrF (OMP decarboxylase) (ompdecase);gene_id=Rv1385;logic_name=ena +Chromosome ena gene 1560445 1561269 . + . ID=gene:Rv1385;Name=pyrF;biotype=protein_coding;description=Probable orotidine 5'-phosphate decarboxylase PyrF (OMP decarboxylase) (ompdecase);gene_id=Rv1385;logic_name=ena Chromosome ena mRNA 1560445 1561269 . + . ID=transcript:Rv1385;Parent=gene:Rv1385;Name=pyrF-1;biotype=protein_coding;transcript_id=Rv1385 Chromosome ena exon 1560445 1561269 . + . Parent=transcript:Rv1385;Name=Rv1385-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1385-1;rank=1 Chromosome ena CDS 1560445 1561269 . + 0 ID=CDS:Rv1385;Parent=transcript:Rv1385;protein_id=Rv1385 ### -Chromosome ena gene 1561464 1561772 . + . ID=gene:Rv1386;Name=PE15;biotype=protein_coding;description=PE family protein PE15;gene_id=Rv1386;logic_name=ena +Chromosome ena gene 1561464 1561772 . + . ID=gene:Rv1386;Name=PE15;biotype=protein_coding;description=PE family protein PE15;gene_id=Rv1386;logic_name=ena Chromosome ena mRNA 1561464 1561772 . + . ID=transcript:Rv1386;Parent=gene:Rv1386;Name=PE15-1;biotype=protein_coding;transcript_id=Rv1386 Chromosome ena exon 1561464 1561772 . + . Parent=transcript:Rv1386;Name=Rv1386-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1386-1;rank=1 Chromosome ena CDS 1561464 1561772 . + 0 ID=CDS:Rv1386;Parent=transcript:Rv1386;protein_id=Rv1386 ### -Chromosome ena gene 1561769 1563388 . + . ID=gene:Rv1387;Name=PPE20;biotype=protein_coding;description=PPE family protein PPE20;gene_id=Rv1387;logic_name=ena +Chromosome ena gene 1561769 1563388 . + . ID=gene:Rv1387;Name=PPE20;biotype=protein_coding;description=PPE family protein PPE20;gene_id=Rv1387;logic_name=ena Chromosome ena mRNA 1561769 1563388 . + . ID=transcript:Rv1387;Parent=gene:Rv1387;Name=PPE20-1;biotype=protein_coding;transcript_id=Rv1387 Chromosome ena exon 1561769 1563388 . + . Parent=transcript:Rv1387;Name=Rv1387-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1387-1;rank=1 Chromosome ena CDS 1561769 1563388 . + 0 ID=CDS:Rv1387;Parent=transcript:Rv1387;protein_id=Rv1387 ### -Chromosome ena gene 1563694 1564266 . + . ID=gene:Rv1388;Name=mihF;biotype=protein_coding;description=Putative integration host factor MihF;gene_id=Rv1388;logic_name=ena +Chromosome ena gene 1563694 1564266 . + . ID=gene:Rv1388;Name=mihF;biotype=protein_coding;description=Putative integration host factor MihF;gene_id=Rv1388;logic_name=ena Chromosome ena mRNA 1563694 1564266 . + . ID=transcript:Rv1388;Parent=gene:Rv1388;Name=mihF-1;biotype=protein_coding;transcript_id=Rv1388 Chromosome ena exon 1563694 1564266 . + . Parent=transcript:Rv1388;Name=Rv1388-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1388-1;rank=1 Chromosome ena CDS 1563694 1564266 . + 0 ID=CDS:Rv1388;Parent=transcript:Rv1388;protein_id=Rv1388 ### -Chromosome ena gene 1564401 1565027 . + . ID=gene:Rv1389;Name=gmk;biotype=protein_coding;description=Probable guanylate kinase Gmk;gene_id=Rv1389;logic_name=ena +Chromosome ena gene 1564401 1565027 . + . ID=gene:Rv1389;Name=gmk;biotype=protein_coding;description=Probable guanylate kinase Gmk;gene_id=Rv1389;logic_name=ena Chromosome ena mRNA 1564401 1565027 . + . ID=transcript:Rv1389;Parent=gene:Rv1389;Name=gmk-1;biotype=protein_coding;transcript_id=Rv1389 Chromosome ena exon 1564401 1565027 . + . Parent=transcript:Rv1389;Name=Rv1389-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1389-1;rank=1 Chromosome ena CDS 1564401 1565027 . + 0 ID=CDS:Rv1389;Parent=transcript:Rv1389;protein_id=Rv1389 ### -Chromosome ena gene 1565093 1565425 . + . ID=gene:Rv1390;Name=rpoZ;biotype=protein_coding;description=Probable DNA-directed RNA polymerase (omega chain) RpoZ (transcriptase omega chain) (RNA polymerase omega subunit);gene_id=Rv1390;logic_name=ena +Chromosome ena gene 1565093 1565425 . + . ID=gene:Rv1390;Name=rpoZ;biotype=protein_coding;description=Probable DNA-directed RNA polymerase (omega chain) RpoZ (transcriptase omega chain) (RNA polymerase omega subunit);gene_id=Rv1390;logic_name=ena Chromosome ena mRNA 1565093 1565425 . + . ID=transcript:Rv1390;Parent=gene:Rv1390;Name=rpoZ-1;biotype=protein_coding;transcript_id=Rv1390 Chromosome ena exon 1565093 1565425 . + . Parent=transcript:Rv1390;Name=Rv1390-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1390-1;rank=1 Chromosome ena CDS 1565093 1565425 . + 0 ID=CDS:Rv1390;Parent=transcript:Rv1390;protein_id=Rv1390 ### -Chromosome ena gene 1565441 1566697 . + . ID=gene:Rv1391;Name=dfp;biotype=protein_coding;description=Probable DNA/pantothenate metabolism flavoprotein homolog Dfp;gene_id=Rv1391;logic_name=ena +Chromosome ena gene 1565441 1566697 . + . ID=gene:Rv1391;Name=dfp;biotype=protein_coding;description=Probable DNA/pantothenate metabolism flavoprotein homolog Dfp;gene_id=Rv1391;logic_name=ena Chromosome ena mRNA 1565441 1566697 . + . ID=transcript:Rv1391;Parent=gene:Rv1391;Name=dfp-1;biotype=protein_coding;transcript_id=Rv1391 Chromosome ena exon 1565441 1566697 . + . Parent=transcript:Rv1391;Name=Rv1391-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1391-1;rank=1 Chromosome ena CDS 1565441 1566697 . + 0 ID=CDS:Rv1391;Parent=transcript:Rv1391;protein_id=Rv1391 ### -Chromosome ena gene 1566825 1568036 . + . ID=gene:Rv1392;Name=metK;biotype=protein_coding;description=Probable S-adenosylmethionine synthetase MetK (mat) (AdoMet synthetase) (methionine adenosyltransferase);gene_id=Rv1392;logic_name=ena +Chromosome ena gene 1566825 1568036 . + . ID=gene:Rv1392;Name=metK;biotype=protein_coding;description=Probable S-adenosylmethionine synthetase MetK (mat) (AdoMet synthetase) (methionine adenosyltransferase);gene_id=Rv1392;logic_name=ena Chromosome ena mRNA 1566825 1568036 . + . ID=transcript:Rv1392;Parent=gene:Rv1392;Name=metK-1;biotype=protein_coding;transcript_id=Rv1392 Chromosome ena exon 1566825 1568036 . + . Parent=transcript:Rv1392;Name=Rv1392-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1392-1;rank=1 Chromosome ena CDS 1566825 1568036 . + 0 ID=CDS:Rv1392;Parent=transcript:Rv1392;protein_id=Rv1392 ### -Chromosome ena gene 1568109 1569587 . - . ID=gene:Rv1393c;biotype=protein_coding;description=Probable monoxygenase;gene_id=Rv1393c;logic_name=ena +Chromosome ena gene 1568109 1569587 . - . ID=gene:Rv1393c;biotype=protein_coding;description=Probable monoxygenase;gene_id=Rv1393c;logic_name=ena Chromosome ena mRNA 1568109 1569587 . - . ID=transcript:Rv1393c;Parent=gene:Rv1393c;biotype=protein_coding;transcript_id=Rv1393c Chromosome ena exon 1568109 1569587 . - . Parent=transcript:Rv1393c;Name=Rv1393c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1393c-1;rank=1 Chromosome ena CDS 1568109 1569587 . - 0 ID=CDS:Rv1393c;Parent=transcript:Rv1393c;protein_id=Rv1393c ### -Chromosome ena gene 1569584 1570969 . - . ID=gene:Rv1394c;Name=cyp132;biotype=protein_coding;description=Probable cytochrome P450 132 Cyp132;gene_id=Rv1394c;logic_name=ena +Chromosome ena gene 1569584 1570969 . - . ID=gene:Rv1394c;Name=cyp132;biotype=protein_coding;description=Probable cytochrome P450 132 Cyp132;gene_id=Rv1394c;logic_name=ena Chromosome ena mRNA 1569584 1570969 . - . ID=transcript:Rv1394c;Parent=gene:Rv1394c;Name=cyp132-1;biotype=protein_coding;transcript_id=Rv1394c Chromosome ena exon 1569584 1570969 . - . Parent=transcript:Rv1394c;Name=Rv1394c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1394c-1;rank=1 Chromosome ena CDS 1569584 1570969 . - 0 ID=CDS:Rv1394c;Parent=transcript:Rv1394c;protein_id=Rv1394c ### -Chromosome ena gene 1571047 1572081 . + . ID=gene:Rv1395;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv1395;logic_name=ena +Chromosome ena gene 1571047 1572081 . + . ID=gene:Rv1395;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv1395;logic_name=ena Chromosome ena mRNA 1571047 1572081 . + . ID=transcript:Rv1395;Parent=gene:Rv1395;biotype=protein_coding;transcript_id=Rv1395 Chromosome ena exon 1571047 1572081 . + . Parent=transcript:Rv1395;Name=Rv1395-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1395-1;rank=1 Chromosome ena CDS 1571047 1572081 . + 0 ID=CDS:Rv1395;Parent=transcript:Rv1395;protein_id=Rv1395 ### -Chromosome ena gene 1572127 1573857 . - . ID=gene:Rv1396c;Name=PE_PGRS25;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS25;gene_id=Rv1396c;logic_name=ena +Chromosome ena gene 1572127 1573857 . - . ID=gene:Rv1396c;Name=PE_PGRS25;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS25;gene_id=Rv1396c;logic_name=ena Chromosome ena mRNA 1572127 1573857 . - . ID=transcript:Rv1396c;Parent=gene:Rv1396c;Name=PE_PGRS25-1;biotype=protein_coding;transcript_id=Rv1396c Chromosome ena exon 1572127 1573857 . - . Parent=transcript:Rv1396c;Name=Rv1396c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1396c-1;rank=1 Chromosome ena CDS 1572127 1573857 . - 0 ID=CDS:Rv1396c;Parent=transcript:Rv1396c;protein_id=Rv1396c ### -Chromosome ena gene 1574112 1574513 . - . ID=gene:Rv1397c;Name=vapC10;biotype=protein_coding;description=Possible toxin VapC10;gene_id=Rv1397c;logic_name=ena +Chromosome ena gene 1574112 1574513 . - . ID=gene:Rv1397c;Name=vapC10;biotype=protein_coding;description=Possible toxin VapC10;gene_id=Rv1397c;logic_name=ena Chromosome ena mRNA 1574112 1574513 . - . ID=transcript:Rv1397c;Parent=gene:Rv1397c;Name=vapC10-1;biotype=protein_coding;transcript_id=Rv1397c Chromosome ena exon 1574112 1574513 . - . Parent=transcript:Rv1397c;Name=Rv1397c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1397c-1;rank=1 Chromosome ena CDS 1574112 1574513 . - 0 ID=CDS:Rv1397c;Parent=transcript:Rv1397c;protein_id=Rv1397c ### -Chromosome ena gene 1574510 1574767 . - . ID=gene:Rv1398c;Name=vapB10;biotype=protein_coding;description=Possible antitoxin VapB10;gene_id=Rv1398c;logic_name=ena +Chromosome ena gene 1574510 1574767 . - . ID=gene:Rv1398c;Name=vapB10;biotype=protein_coding;description=Possible antitoxin VapB10;gene_id=Rv1398c;logic_name=ena Chromosome ena mRNA 1574510 1574767 . - . ID=transcript:Rv1398c;Parent=gene:Rv1398c;Name=vapB10-1;biotype=protein_coding;transcript_id=Rv1398c Chromosome ena exon 1574510 1574767 . - . Parent=transcript:Rv1398c;Name=Rv1398c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1398c-1;rank=1 Chromosome ena CDS 1574510 1574767 . - 0 ID=CDS:Rv1398c;Parent=transcript:Rv1398c;protein_id=Rv1398c ### -Chromosome ena gene 1574850 1575809 . - . ID=gene:Rv1399c;Name=nlhH;biotype=protein_coding;description=Probable non lipolytic carboxylesterase NlhH;gene_id=Rv1399c;logic_name=ena +Chromosome ena gene 1574850 1575809 . - . ID=gene:Rv1399c;Name=nlhH;biotype=protein_coding;description=Probable non lipolytic carboxylesterase NlhH;gene_id=Rv1399c;logic_name=ena Chromosome ena mRNA 1574850 1575809 . - . ID=transcript:Rv1399c;Parent=gene:Rv1399c;Name=nlhH-1;biotype=protein_coding;transcript_id=Rv1399c Chromosome ena exon 1574850 1575809 . - . Parent=transcript:Rv1399c;Name=Rv1399c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1399c-1;rank=1 Chromosome ena CDS 1574850 1575809 . - 0 ID=CDS:Rv1399c;Parent=transcript:Rv1399c;protein_id=Rv1399c ### -Chromosome ena gene 1575834 1576796 . - . ID=gene:Rv1400c;Name=lipI;biotype=protein_coding;description=Probable lipase LipH;gene_id=Rv1400c;logic_name=ena +Chromosome ena gene 1575834 1576796 . - . ID=gene:Rv1400c;Name=lipI;biotype=protein_coding;description=Probable lipase LipH;gene_id=Rv1400c;logic_name=ena Chromosome ena mRNA 1575834 1576796 . - . ID=transcript:Rv1400c;Parent=gene:Rv1400c;Name=lipI-1;biotype=protein_coding;transcript_id=Rv1400c Chromosome ena exon 1575834 1576796 . - . Parent=transcript:Rv1400c;Name=Rv1400c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1400c-1;rank=1 Chromosome ena CDS 1575834 1576796 . - 0 ID=CDS:Rv1400c;Parent=transcript:Rv1400c;protein_id=Rv1400c ### -Chromosome ena gene 1576930 1577532 . + . ID=gene:Rv1401;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1401;logic_name=ena +Chromosome ena gene 1576930 1577532 . + . ID=gene:Rv1401;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1401;logic_name=ena Chromosome ena mRNA 1576930 1577532 . + . ID=transcript:Rv1401;Parent=gene:Rv1401;biotype=protein_coding;transcript_id=Rv1401 Chromosome ena exon 1576930 1577532 . + . Parent=transcript:Rv1401;Name=Rv1401-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1401-1;rank=1 Chromosome ena CDS 1576930 1577532 . + 0 ID=CDS:Rv1401;Parent=transcript:Rv1401;protein_id=Rv1401 ### -Chromosome ena gene 1577613 1579580 . + . ID=gene:Rv1402;Name=priA;biotype=protein_coding;description=Putative primosomal protein N' PriA (replication factor Y);gene_id=Rv1402;logic_name=ena +Chromosome ena gene 1577613 1579580 . + . ID=gene:Rv1402;Name=priA;biotype=protein_coding;description=Putative primosomal protein N' PriA (replication factor Y);gene_id=Rv1402;logic_name=ena Chromosome ena mRNA 1577613 1579580 . + . ID=transcript:Rv1402;Parent=gene:Rv1402;Name=priA-1;biotype=protein_coding;transcript_id=Rv1402 Chromosome ena exon 1577613 1579580 . + . Parent=transcript:Rv1402;Name=Rv1402-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1402-1;rank=1 Chromosome ena CDS 1577613 1579580 . + 0 ID=CDS:Rv1402;Parent=transcript:Rv1402;protein_id=Rv1402 ### -Chromosome ena gene 1579598 1580422 . - . ID=gene:Rv1403c;biotype=protein_coding;description=Putative methyltransferase;gene_id=Rv1403c;logic_name=ena +Chromosome ena gene 1579598 1580422 . - . ID=gene:Rv1403c;biotype=protein_coding;description=Putative methyltransferase;gene_id=Rv1403c;logic_name=ena Chromosome ena mRNA 1579598 1580422 . - . ID=transcript:Rv1403c;Parent=gene:Rv1403c;biotype=protein_coding;transcript_id=Rv1403c Chromosome ena exon 1579598 1580422 . - . Parent=transcript:Rv1403c;Name=Rv1403c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1403c-1;rank=1 Chromosome ena CDS 1579598 1580422 . - 0 ID=CDS:Rv1403c;Parent=transcript:Rv1403c;protein_id=Rv1403c ### -Chromosome ena gene 1580591 1581073 . + . ID=gene:Rv1404;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1404;logic_name=ena +Chromosome ena gene 1580591 1581073 . + . ID=gene:Rv1404;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1404;logic_name=ena Chromosome ena mRNA 1580591 1581073 . + . ID=transcript:Rv1404;Parent=gene:Rv1404;biotype=protein_coding;transcript_id=Rv1404 Chromosome ena exon 1580591 1581073 . + . Parent=transcript:Rv1404;Name=Rv1404-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1404-1;rank=1 Chromosome ena CDS 1580591 1581073 . + 0 ID=CDS:Rv1404;Parent=transcript:Rv1404;protein_id=Rv1404 ### -Chromosome ena gene 1581145 1581969 . - . ID=gene:Rv1405c;biotype=protein_coding;description=Putative methyltransferase;gene_id=Rv1405c;logic_name=ena +Chromosome ena gene 1581145 1581969 . - . ID=gene:Rv1405c;biotype=protein_coding;description=Putative methyltransferase;gene_id=Rv1405c;logic_name=ena Chromosome ena mRNA 1581145 1581969 . - . ID=transcript:Rv1405c;Parent=gene:Rv1405c;biotype=protein_coding;transcript_id=Rv1405c Chromosome ena exon 1581145 1581969 . - . Parent=transcript:Rv1405c;Name=Rv1405c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1405c-1;rank=1 Chromosome ena CDS 1581145 1581969 . - 0 ID=CDS:Rv1405c;Parent=transcript:Rv1405c;protein_id=Rv1405c ### -Chromosome ena gene 1582166 1583104 . + . ID=gene:Rv1406;Name=fmt;biotype=protein_coding;description=Probable methionyl-tRNA formyltransferase Fmt;gene_id=Rv1406;logic_name=ena +Chromosome ena gene 1582166 1583104 . + . ID=gene:Rv1406;Name=fmt;biotype=protein_coding;description=Probable methionyl-tRNA formyltransferase Fmt;gene_id=Rv1406;logic_name=ena Chromosome ena mRNA 1582166 1583104 . + . ID=transcript:Rv1406;Parent=gene:Rv1406;Name=fmt-1;biotype=protein_coding;transcript_id=Rv1406 Chromosome ena exon 1582166 1583104 . + . Parent=transcript:Rv1406;Name=Rv1406-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1406-1;rank=1 Chromosome ena CDS 1582166 1583104 . + 0 ID=CDS:Rv1406;Parent=transcript:Rv1406;protein_id=Rv1406 ### -Chromosome ena gene 1583101 1584474 . + . ID=gene:Rv1407;Name=fmu;biotype=protein_coding;description=Probable Fmu protein (sun protein);gene_id=Rv1407;logic_name=ena +Chromosome ena gene 1583101 1584474 . + . ID=gene:Rv1407;Name=fmu;biotype=protein_coding;description=Probable Fmu protein (sun protein);gene_id=Rv1407;logic_name=ena Chromosome ena mRNA 1583101 1584474 . + . ID=transcript:Rv1407;Parent=gene:Rv1407;Name=fmu-1;biotype=protein_coding;transcript_id=Rv1407 Chromosome ena exon 1583101 1584474 . + . Parent=transcript:Rv1407;Name=Rv1407-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1407-1;rank=1 Chromosome ena CDS 1583101 1584474 . + 0 ID=CDS:Rv1407;Parent=transcript:Rv1407;protein_id=Rv1407 ### -Chromosome ena gene 1584499 1585197 . + . ID=gene:Rv1408;Name=rpe;biotype=protein_coding;description=Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase);gene_id=Rv1408;logic_name=ena +Chromosome ena gene 1584499 1585197 . + . ID=gene:Rv1408;Name=rpe;biotype=protein_coding;description=Probable ribulose-phosphate 3-epimerase Rpe (PPE) (R5P3E) (pentose-5-phosphate 3-epimerase);gene_id=Rv1408;logic_name=ena Chromosome ena mRNA 1584499 1585197 . + . ID=transcript:Rv1408;Parent=gene:Rv1408;Name=rpe-1;biotype=protein_coding;transcript_id=Rv1408 Chromosome ena exon 1584499 1585197 . + . Parent=transcript:Rv1408;Name=Rv1408-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1408-1;rank=1 Chromosome ena CDS 1584499 1585197 . + 0 ID=CDS:Rv1408;Parent=transcript:Rv1408;protein_id=Rv1408 ### -Chromosome ena gene 1585194 1586213 . + . ID=gene:Rv1409;Name=ribG;biotype=protein_coding;description=Probable bifunctional riboflavin biosynthesis protein RibG : diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP reductase);gene_id=Rv1409;logic_name=ena +Chromosome ena gene 1585194 1586213 . + . ID=gene:Rv1409;Name=ribG;biotype=protein_coding;description=Probable bifunctional riboflavin biosynthesis protein RibG : diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP reductase);gene_id=Rv1409;logic_name=ena Chromosome ena mRNA 1585194 1586213 . + . ID=transcript:Rv1409;Parent=gene:Rv1409;Name=ribG-1;biotype=protein_coding;transcript_id=Rv1409 Chromosome ena exon 1585194 1586213 . + . Parent=transcript:Rv1409;Name=Rv1409-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1409-1;rank=1 Chromosome ena CDS 1585194 1586213 . + 0 ID=CDS:Rv1409;Parent=transcript:Rv1409;protein_id=Rv1409 ### -Chromosome ena gene 1586210 1587766 . - . ID=gene:Rv1410c;biotype=protein_coding;description=Aminoglycosides/tetracycline-transport integral membrane protein;gene_id=Rv1410c;logic_name=ena +Chromosome ena gene 1586210 1587766 . - . ID=gene:Rv1410c;biotype=protein_coding;description=Aminoglycosides/tetracycline-transport integral membrane protein;gene_id=Rv1410c;logic_name=ena Chromosome ena mRNA 1586210 1587766 . - . ID=transcript:Rv1410c;Parent=gene:Rv1410c;biotype=protein_coding;transcript_id=Rv1410c Chromosome ena exon 1586210 1587766 . - . Parent=transcript:Rv1410c;Name=Rv1410c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1410c-1;rank=1 Chromosome ena CDS 1586210 1587766 . - 0 ID=CDS:Rv1410c;Parent=transcript:Rv1410c;protein_id=Rv1410c ### -Chromosome ena gene 1587772 1588482 . - . ID=gene:Rv1411c;Name=lprG;biotype=protein_coding;description=Conserved lipoprotein LprG;gene_id=Rv1411c;logic_name=ena +Chromosome ena gene 1587772 1588482 . - . ID=gene:Rv1411c;Name=lprG;biotype=protein_coding;description=Conserved lipoprotein LprG;gene_id=Rv1411c;logic_name=ena Chromosome ena mRNA 1587772 1588482 . - . ID=transcript:Rv1411c;Parent=gene:Rv1411c;Name=lprG-1;biotype=protein_coding;transcript_id=Rv1411c Chromosome ena exon 1587772 1588482 . - . Parent=transcript:Rv1411c;Name=Rv1411c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1411c-1;rank=1 Chromosome ena CDS 1587772 1588482 . - 0 ID=CDS:Rv1411c;Parent=transcript:Rv1411c;protein_id=Rv1411c ### -Chromosome ena gene 1588567 1589172 . + . ID=gene:Rv1412;Name=ribC;biotype=protein_coding;description=Probable riboflavin synthase alpha chain RibC (RibE);gene_id=Rv1412;logic_name=ena +Chromosome ena gene 1588567 1589172 . + . ID=gene:Rv1412;Name=ribC;biotype=protein_coding;description=Probable riboflavin synthase alpha chain RibC (RibE);gene_id=Rv1412;logic_name=ena Chromosome ena mRNA 1588567 1589172 . + . ID=transcript:Rv1412;Parent=gene:Rv1412;Name=ribC-1;biotype=protein_coding;transcript_id=Rv1412 Chromosome ena exon 1588567 1589172 . + . Parent=transcript:Rv1412;Name=Rv1412-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1412-1;rank=1 Chromosome ena CDS 1588567 1589172 . + 0 ID=CDS:Rv1412;Parent=transcript:Rv1412;protein_id=Rv1412 ### -Chromosome ena gene 1589386 1589901 . + . ID=gene:Rv1413;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1413;logic_name=ena +Chromosome ena gene 1589386 1589901 . + . ID=gene:Rv1413;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1413;logic_name=ena Chromosome ena mRNA 1589386 1589901 . + . ID=transcript:Rv1413;Parent=gene:Rv1413;biotype=protein_coding;transcript_id=Rv1413 Chromosome ena exon 1589386 1589901 . + . Parent=transcript:Rv1413;Name=Rv1413-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1413-1;rank=1 Chromosome ena CDS 1589386 1589901 . + 0 ID=CDS:Rv1413;Parent=transcript:Rv1413;protein_id=Rv1413 ### -Chromosome ena gene 1589891 1590292 . + . ID=gene:Rv1414;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1414;logic_name=ena +Chromosome ena gene 1589891 1590292 . + . ID=gene:Rv1414;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1414;logic_name=ena Chromosome ena mRNA 1589891 1590292 . + . ID=transcript:Rv1414;Parent=gene:Rv1414;biotype=protein_coding;transcript_id=Rv1414 Chromosome ena exon 1589891 1590292 . + . Parent=transcript:Rv1414;Name=Rv1414-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1414-1;rank=1 Chromosome ena CDS 1589891 1590292 . + 0 ID=CDS:Rv1414;Parent=transcript:Rv1414;protein_id=Rv1414 ### -Chromosome ena gene 1590397 1591674 . + . ID=gene:Rv1415;Name=ribA2;biotype=protein_coding;description=Probable riboflavin biosynthesis protein RibA2 : GTP cyclohydrolase II + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase);gene_id=Rv1415;logic_name=ena +Chromosome ena gene 1590397 1591674 . + . ID=gene:Rv1415;Name=ribA2;biotype=protein_coding;description=Probable riboflavin biosynthesis protein RibA2 : GTP cyclohydrolase II + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase);gene_id=Rv1415;logic_name=ena Chromosome ena mRNA 1590397 1591674 . + . ID=transcript:Rv1415;Parent=gene:Rv1415;Name=ribA2-1;biotype=protein_coding;transcript_id=Rv1415 Chromosome ena exon 1590397 1591674 . + . Parent=transcript:Rv1415;Name=Rv1415-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1415-1;rank=1 Chromosome ena CDS 1590397 1591674 . + 0 ID=CDS:Rv1415;Parent=transcript:Rv1415;protein_id=Rv1415 ### -Chromosome ena gene 1591671 1592153 . + . ID=gene:Rv1416;Name=ribH;biotype=protein_coding;description=Probable riboflavin synthase beta chain RibH (6%2C7-dimethyl-8-ribityllumazine synthase) (DMRL synthase) (lumazine synthase);gene_id=Rv1416;logic_name=ena +Chromosome ena gene 1591671 1592153 . + . ID=gene:Rv1416;Name=ribH;biotype=protein_coding;description=Probable riboflavin synthase beta chain RibH (6%2C7-dimethyl-8-ribityllumazine synthase) (DMRL synthase) (lumazine synthase);gene_id=Rv1416;logic_name=ena Chromosome ena mRNA 1591671 1592153 . + . ID=transcript:Rv1416;Parent=gene:Rv1416;Name=ribH-1;biotype=protein_coding;transcript_id=Rv1416 Chromosome ena exon 1591671 1592153 . + . Parent=transcript:Rv1416;Name=Rv1416-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1416-1;rank=1 Chromosome ena CDS 1591671 1592153 . + 0 ID=CDS:Rv1416;Parent=transcript:Rv1416;protein_id=Rv1416 ### -Chromosome ena gene 1592150 1592614 . + . ID=gene:Rv1417;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1417;logic_name=ena +Chromosome ena gene 1592150 1592614 . + . ID=gene:Rv1417;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1417;logic_name=ena Chromosome ena mRNA 1592150 1592614 . + . ID=transcript:Rv1417;Parent=gene:Rv1417;biotype=protein_coding;transcript_id=Rv1417 Chromosome ena exon 1592150 1592614 . + . Parent=transcript:Rv1417;Name=Rv1417-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1417-1;rank=1 Chromosome ena CDS 1592150 1592614 . + 0 ID=CDS:Rv1417;Parent=transcript:Rv1417;protein_id=Rv1417 ### -Chromosome ena gene 1592639 1593325 . + . ID=gene:Rv1418;Name=lprH;biotype=protein_coding;description=Probable lipoprotein LprH;gene_id=Rv1418;logic_name=ena +Chromosome ena gene 1592639 1593325 . + . ID=gene:Rv1418;Name=lprH;biotype=protein_coding;description=Probable lipoprotein LprH;gene_id=Rv1418;logic_name=ena Chromosome ena mRNA 1592639 1593325 . + . ID=transcript:Rv1418;Parent=gene:Rv1418;Name=lprH-1;biotype=protein_coding;transcript_id=Rv1418 Chromosome ena exon 1592639 1593325 . + . Parent=transcript:Rv1418;Name=Rv1418-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1418-1;rank=1 Chromosome ena CDS 1592639 1593325 . + 0 ID=CDS:Rv1418;Parent=transcript:Rv1418;protein_id=Rv1418 ### -Chromosome ena gene 1593505 1593978 . + . ID=gene:Rv1419;biotype=protein_coding;description=Unknown protein;gene_id=Rv1419;logic_name=ena +Chromosome ena gene 1593505 1593978 . + . ID=gene:Rv1419;biotype=protein_coding;description=Unknown protein;gene_id=Rv1419;logic_name=ena Chromosome ena mRNA 1593505 1593978 . + . ID=transcript:Rv1419;Parent=gene:Rv1419;biotype=protein_coding;transcript_id=Rv1419 Chromosome ena exon 1593505 1593978 . + . Parent=transcript:Rv1419;Name=Rv1419-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1419-1;rank=1 Chromosome ena CDS 1593505 1593978 . + 0 ID=CDS:Rv1419;Parent=transcript:Rv1419;protein_id=Rv1419 ### -Chromosome ena gene 1594042 1595982 . + . ID=gene:Rv1420;Name=uvrC;biotype=protein_coding;description=Probable excinuclease ABC (subunit C-nuclease) UvrC;gene_id=Rv1420;logic_name=ena +Chromosome ena gene 1594042 1595982 . + . ID=gene:Rv1420;Name=uvrC;biotype=protein_coding;description=Probable excinuclease ABC (subunit C-nuclease) UvrC;gene_id=Rv1420;logic_name=ena Chromosome ena mRNA 1594042 1595982 . + . ID=transcript:Rv1420;Parent=gene:Rv1420;Name=uvrC-1;biotype=protein_coding;transcript_id=Rv1420 Chromosome ena exon 1594042 1595982 . + . Parent=transcript:Rv1420;Name=Rv1420-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1420-1;rank=1 Chromosome ena CDS 1594042 1595982 . + 0 ID=CDS:Rv1420;Parent=transcript:Rv1420;protein_id=Rv1420 ### -Chromosome ena gene 1595979 1596884 . + . ID=gene:Rv1421;biotype=protein_coding;description=Conserved protein;gene_id=Rv1421;logic_name=ena +Chromosome ena gene 1595979 1596884 . + . ID=gene:Rv1421;biotype=protein_coding;description=Conserved protein;gene_id=Rv1421;logic_name=ena Chromosome ena mRNA 1595979 1596884 . + . ID=transcript:Rv1421;Parent=gene:Rv1421;biotype=protein_coding;transcript_id=Rv1421 Chromosome ena exon 1595979 1596884 . + . Parent=transcript:Rv1421;Name=Rv1421-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1421-1;rank=1 Chromosome ena CDS 1595979 1596884 . + 0 ID=CDS:Rv1421;Parent=transcript:Rv1421;protein_id=Rv1421 ### -Chromosome ena gene 1596881 1597909 . + . ID=gene:Rv1422;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1422;logic_name=ena +Chromosome ena gene 1596881 1597909 . + . ID=gene:Rv1422;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1422;logic_name=ena Chromosome ena mRNA 1596881 1597909 . + . ID=transcript:Rv1422;Parent=gene:Rv1422;biotype=protein_coding;transcript_id=Rv1422 Chromosome ena exon 1596881 1597909 . + . Parent=transcript:Rv1422;Name=Rv1422-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1422-1;rank=1 Chromosome ena CDS 1596881 1597909 . + 0 ID=CDS:Rv1422;Parent=transcript:Rv1422;protein_id=Rv1422 ### -Chromosome ena gene 1597906 1598883 . + . ID=gene:Rv1423;Name=whiA;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiA;gene_id=Rv1423;logic_name=ena +Chromosome ena gene 1597906 1598883 . + . ID=gene:Rv1423;Name=whiA;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiA;gene_id=Rv1423;logic_name=ena Chromosome ena mRNA 1597906 1598883 . + . ID=transcript:Rv1423;Parent=gene:Rv1423;Name=whiA-1;biotype=protein_coding;transcript_id=Rv1423 Chromosome ena exon 1597906 1598883 . + . Parent=transcript:Rv1423;Name=Rv1423-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1423-1;rank=1 Chromosome ena CDS 1597906 1598883 . + 0 ID=CDS:Rv1423;Parent=transcript:Rv1423;protein_id=Rv1423 ### -Chromosome ena gene 1598893 1599654 . - . ID=gene:Rv1424c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1424c;logic_name=ena +Chromosome ena gene 1598893 1599654 . - . ID=gene:Rv1424c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1424c;logic_name=ena Chromosome ena mRNA 1598893 1599654 . - . ID=transcript:Rv1424c;Parent=gene:Rv1424c;biotype=protein_coding;transcript_id=Rv1424c Chromosome ena exon 1598893 1599654 . - . Parent=transcript:Rv1424c;Name=Rv1424c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1424c-1;rank=1 Chromosome ena CDS 1598893 1599654 . - 0 ID=CDS:Rv1424c;Parent=transcript:Rv1424c;protein_id=Rv1424c ### -Chromosome ena gene 1599658 1601037 . + . ID=gene:Rv1425;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv1425;logic_name=ena +Chromosome ena gene 1599658 1601037 . + . ID=gene:Rv1425;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv1425;logic_name=ena Chromosome ena mRNA 1599658 1601037 . + . ID=transcript:Rv1425;Parent=gene:Rv1425;biotype=protein_coding;transcript_id=Rv1425 Chromosome ena exon 1599658 1601037 . + . Parent=transcript:Rv1425;Name=Rv1425-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1425-1;rank=1 Chromosome ena CDS 1599658 1601037 . + 0 ID=CDS:Rv1425;Parent=transcript:Rv1425;protein_id=Rv1425 ### -Chromosome ena gene 1601059 1602321 . - . ID=gene:Rv1426c;Name=lipO;biotype=protein_coding;description=Probable esterase LipO;gene_id=Rv1426c;logic_name=ena +Chromosome ena gene 1601059 1602321 . - . ID=gene:Rv1426c;Name=lipO;biotype=protein_coding;description=Probable esterase LipO;gene_id=Rv1426c;logic_name=ena Chromosome ena mRNA 1601059 1602321 . - . ID=transcript:Rv1426c;Parent=gene:Rv1426c;Name=lipO-1;biotype=protein_coding;transcript_id=Rv1426c Chromosome ena exon 1601059 1602321 . - . Parent=transcript:Rv1426c;Name=Rv1426c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1426c-1;rank=1 Chromosome ena CDS 1601059 1602321 . - 0 ID=CDS:Rv1426c;Parent=transcript:Rv1426c;protein_id=Rv1426c ### -Chromosome ena gene 1602321 1603928 . - . ID=gene:Rv1427c;Name=fadD12;biotype=protein_coding;description=Possible long-chain-fatty-acid--CoA ligase FadD12 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1427c;logic_name=ena +Chromosome ena gene 1602321 1603928 . - . ID=gene:Rv1427c;Name=fadD12;biotype=protein_coding;description=Possible long-chain-fatty-acid--CoA ligase FadD12 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1427c;logic_name=ena Chromosome ena mRNA 1602321 1603928 . - . ID=transcript:Rv1427c;Parent=gene:Rv1427c;Name=fadD12-1;biotype=protein_coding;transcript_id=Rv1427c Chromosome ena exon 1602321 1603928 . - . Parent=transcript:Rv1427c;Name=Rv1427c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1427c-1;rank=1 Chromosome ena CDS 1602321 1603928 . - 0 ID=CDS:Rv1427c;Parent=transcript:Rv1427c;protein_id=Rv1427c ### -Chromosome ena gene 1603932 1604759 . - . ID=gene:Rv1428c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1428c;logic_name=ena +Chromosome ena gene 1603932 1604759 . - . ID=gene:Rv1428c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1428c;logic_name=ena Chromosome ena mRNA 1603932 1604759 . - . ID=transcript:Rv1428c;Parent=gene:Rv1428c;biotype=protein_coding;transcript_id=Rv1428c Chromosome ena exon 1603932 1604759 . - . Parent=transcript:Rv1428c;Name=Rv1428c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1428c-1;rank=1 Chromosome ena CDS 1603932 1604759 . - 0 ID=CDS:Rv1428c;Parent=transcript:Rv1428c;protein_id=Rv1428c ### -Chromosome ena gene 1604878 1606146 . + . ID=gene:Rv1429;biotype=protein_coding;description=Conserved protein;gene_id=Rv1429;logic_name=ena +Chromosome ena gene 1604878 1606146 . + . ID=gene:Rv1429;biotype=protein_coding;description=Conserved protein;gene_id=Rv1429;logic_name=ena Chromosome ena mRNA 1604878 1606146 . + . ID=transcript:Rv1429;Parent=gene:Rv1429;biotype=protein_coding;transcript_id=Rv1429 Chromosome ena exon 1604878 1606146 . + . Parent=transcript:Rv1429;Name=Rv1429-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1429-1;rank=1 Chromosome ena CDS 1604878 1606146 . + 0 ID=CDS:Rv1429;Parent=transcript:Rv1429;protein_id=Rv1429 ### -Chromosome ena gene 1606386 1607972 . + . ID=gene:Rv1430;Name=PE16;biotype=protein_coding;description=PE family protein PE16;gene_id=Rv1430;logic_name=ena +Chromosome ena gene 1606386 1607972 . + . ID=gene:Rv1430;Name=PE16;biotype=protein_coding;description=PE family protein PE16;gene_id=Rv1430;logic_name=ena Chromosome ena mRNA 1606386 1607972 . + . ID=transcript:Rv1430;Parent=gene:Rv1430;Name=PE16-1;biotype=protein_coding;transcript_id=Rv1430 Chromosome ena exon 1606386 1607972 . + . Parent=transcript:Rv1430;Name=Rv1430-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1430-1;rank=1 Chromosome ena CDS 1606386 1607972 . + 0 ID=CDS:Rv1430;Parent=transcript:Rv1430;protein_id=Rv1430 ### -Chromosome ena gene 1608083 1609852 . + . ID=gene:Rv1431;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1431;logic_name=ena +Chromosome ena gene 1608083 1609852 . + . ID=gene:Rv1431;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1431;logic_name=ena Chromosome ena mRNA 1608083 1609852 . + . ID=transcript:Rv1431;Parent=gene:Rv1431;biotype=protein_coding;transcript_id=Rv1431 Chromosome ena exon 1608083 1609852 . + . Parent=transcript:Rv1431;Name=Rv1431-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1431-1;rank=1 Chromosome ena CDS 1608083 1609852 . + 0 ID=CDS:Rv1431;Parent=transcript:Rv1431;protein_id=Rv1431 ### -Chromosome ena gene 1609849 1611270 . + . ID=gene:Rv1432;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv1432;logic_name=ena +Chromosome ena gene 1609849 1611270 . + . ID=gene:Rv1432;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv1432;logic_name=ena Chromosome ena mRNA 1609849 1611270 . + . ID=transcript:Rv1432;Parent=gene:Rv1432;biotype=protein_coding;transcript_id=Rv1432 Chromosome ena exon 1609849 1611270 . + . Parent=transcript:Rv1432;Name=Rv1432-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1432-1;rank=1 Chromosome ena CDS 1609849 1611270 . + 0 ID=CDS:Rv1432;Parent=transcript:Rv1432;protein_id=Rv1432 ### -Chromosome ena gene 1611434 1612249 . + . ID=gene:Rv1433;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv1433;logic_name=ena +Chromosome ena gene 1611434 1612249 . + . ID=gene:Rv1433;biotype=protein_coding;description=Possible conserved exported protein;gene_id=Rv1433;logic_name=ena Chromosome ena mRNA 1611434 1612249 . + . ID=transcript:Rv1433;Parent=gene:Rv1433;biotype=protein_coding;transcript_id=Rv1433 Chromosome ena exon 1611434 1612249 . + . Parent=transcript:Rv1433;Name=Rv1433-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1433-1;rank=1 Chromosome ena CDS 1611434 1612249 . + 0 ID=CDS:Rv1433;Parent=transcript:Rv1433;protein_id=Rv1433 ### -Chromosome ena gene 1612256 1612393 . + . ID=gene:Rv1434;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1434;logic_name=ena +Chromosome ena gene 1612256 1612393 . + . ID=gene:Rv1434;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1434;logic_name=ena Chromosome ena mRNA 1612256 1612393 . + . ID=transcript:Rv1434;Parent=gene:Rv1434;biotype=protein_coding;transcript_id=Rv1434 Chromosome ena exon 1612256 1612393 . + . Parent=transcript:Rv1434;Name=Rv1434-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1434-1;rank=1 Chromosome ena CDS 1612256 1612393 . + 0 ID=CDS:Rv1434;Parent=transcript:Rv1434;protein_id=Rv1434 ### -Chromosome ena gene 1612342 1612950 . - . ID=gene:Rv1435c;biotype=protein_coding;description=Probable conserved proline%2C glycine%2C valine-rich secreted protein;gene_id=Rv1435c;logic_name=ena +Chromosome ena gene 1612342 1612950 . - . ID=gene:Rv1435c;biotype=protein_coding;description=Probable conserved proline%2C glycine%2C valine-rich secreted protein;gene_id=Rv1435c;logic_name=ena Chromosome ena mRNA 1612342 1612950 . - . ID=transcript:Rv1435c;Parent=gene:Rv1435c;biotype=protein_coding;transcript_id=Rv1435c Chromosome ena exon 1612342 1612950 . - . Parent=transcript:Rv1435c;Name=Rv1435c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1435c-1;rank=1 Chromosome ena CDS 1612342 1612950 . - 0 ID=CDS:Rv1435c;Parent=transcript:Rv1435c;protein_id=Rv1435c ### -Chromosome ena gene 1613307 1614326 . + . ID=gene:Rv1436;Name=gap;biotype=protein_coding;description=Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH);gene_id=Rv1436;logic_name=ena +Chromosome ena gene 1613307 1614326 . + . ID=gene:Rv1436;Name=gap;biotype=protein_coding;description=Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH);gene_id=Rv1436;logic_name=ena Chromosome ena mRNA 1613307 1614326 . + . ID=transcript:Rv1436;Parent=gene:Rv1436;Name=gap-1;biotype=protein_coding;transcript_id=Rv1436 Chromosome ena exon 1613307 1614326 . + . Parent=transcript:Rv1436;Name=Rv1436-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1436-1;rank=1 Chromosome ena CDS 1613307 1614326 . + 0 ID=CDS:Rv1436;Parent=transcript:Rv1436;protein_id=Rv1436 ### -Chromosome ena gene 1614329 1615567 . + . ID=gene:Rv1437;Name=pgk;biotype=protein_coding;description=Probable phosphoglycerate kinase Pgk;gene_id=Rv1437;logic_name=ena +Chromosome ena gene 1614329 1615567 . + . ID=gene:Rv1437;Name=pgk;biotype=protein_coding;description=Probable phosphoglycerate kinase Pgk;gene_id=Rv1437;logic_name=ena Chromosome ena mRNA 1614329 1615567 . + . ID=transcript:Rv1437;Parent=gene:Rv1437;Name=pgk-1;biotype=protein_coding;transcript_id=Rv1437 Chromosome ena exon 1614329 1615567 . + . Parent=transcript:Rv1437;Name=Rv1437-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1437-1;rank=1 Chromosome ena CDS 1614329 1615567 . + 0 ID=CDS:Rv1437;Parent=transcript:Rv1437;protein_id=Rv1437 ### -Chromosome ena gene 1615564 1616349 . + . ID=gene:Rv1438;Name=tpi;biotype=protein_coding;description=Probable triosephosphate isomerase Tpi (TIM);gene_id=Rv1438;logic_name=ena +Chromosome ena gene 1615564 1616349 . + . ID=gene:Rv1438;Name=tpi;biotype=protein_coding;description=Probable triosephosphate isomerase Tpi (TIM);gene_id=Rv1438;logic_name=ena Chromosome ena mRNA 1615564 1616349 . + . ID=transcript:Rv1438;Parent=gene:Rv1438;Name=tpi-1;biotype=protein_coding;transcript_id=Rv1438 Chromosome ena exon 1615564 1616349 . + . Parent=transcript:Rv1438;Name=Rv1438-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1438-1;rank=1 Chromosome ena CDS 1615564 1616349 . + 0 ID=CDS:Rv1438;Parent=transcript:Rv1438;protein_id=Rv1438 ### -Chromosome ena gene 1616961 1617386 . - . ID=gene:Rv1439c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1439c;logic_name=ena +Chromosome ena gene 1616961 1617386 . - . ID=gene:Rv1439c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1439c;logic_name=ena Chromosome ena mRNA 1616961 1617386 . - . ID=transcript:Rv1439c;Parent=gene:Rv1439c;biotype=protein_coding;transcript_id=Rv1439c Chromosome ena exon 1616961 1617386 . - . Parent=transcript:Rv1439c;Name=Rv1439c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1439c-1;rank=1 Chromosome ena CDS 1616961 1617386 . - 0 ID=CDS:Rv1439c;Parent=transcript:Rv1439c;protein_id=Rv1439c ### -Chromosome ena gene 1617837 1618070 . + . ID=gene:Rv1440;Name=secG;biotype=protein_coding;description=Probable protein-export membrane protein (translocase subunit) SecG;gene_id=Rv1440;logic_name=ena +Chromosome ena gene 1617837 1618070 . + . ID=gene:Rv1440;Name=secG;biotype=protein_coding;description=Probable protein-export membrane protein (translocase subunit) SecG;gene_id=Rv1440;logic_name=ena Chromosome ena mRNA 1617837 1618070 . + . ID=transcript:Rv1440;Parent=gene:Rv1440;Name=secG-1;biotype=protein_coding;transcript_id=Rv1440 Chromosome ena exon 1617837 1618070 . + . Parent=transcript:Rv1440;Name=Rv1440-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1440-1;rank=1 Chromosome ena CDS 1617837 1618070 . + 0 ID=CDS:Rv1440;Parent=transcript:Rv1440;protein_id=Rv1440 ### -Chromosome ena gene 1618209 1619684 . - . ID=gene:Rv1441c;Name=PE_PGRS26;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS26;gene_id=Rv1441c;logic_name=ena +Chromosome ena gene 1618209 1619684 . - . ID=gene:Rv1441c;Name=PE_PGRS26;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS26;gene_id=Rv1441c;logic_name=ena Chromosome ena mRNA 1618209 1619684 . - . ID=transcript:Rv1441c;Parent=gene:Rv1441c;Name=PE_PGRS26-1;biotype=protein_coding;transcript_id=Rv1441c Chromosome ena exon 1618209 1619684 . - . Parent=transcript:Rv1441c;Name=Rv1441c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1441c-1;rank=1 Chromosome ena CDS 1618209 1619684 . - 0 ID=CDS:Rv1441c;Parent=transcript:Rv1441c;protein_id=Rv1441c ### -Chromosome ena gene 1619791 1622091 . + . ID=gene:Rv1442;Name=bisC;biotype=protein_coding;description=Probable biotin sulfoxide reductase BisC (BDS reductase) (BSO reductase);gene_id=Rv1442;logic_name=ena +Chromosome ena gene 1619791 1622091 . + . ID=gene:Rv1442;Name=bisC;biotype=protein_coding;description=Probable biotin sulfoxide reductase BisC (BDS reductase) (BSO reductase);gene_id=Rv1442;logic_name=ena Chromosome ena mRNA 1619791 1622091 . + . ID=transcript:Rv1442;Parent=gene:Rv1442;Name=bisC-1;biotype=protein_coding;transcript_id=Rv1442 Chromosome ena exon 1619791 1622091 . + . Parent=transcript:Rv1442;Name=Rv1442-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1442-1;rank=1 Chromosome ena CDS 1619791 1622091 . + 0 ID=CDS:Rv1442;Parent=transcript:Rv1442;protein_id=Rv1442 ### -Chromosome ena gene 1622207 1622692 . - . ID=gene:Rv1443c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1443c;logic_name=ena +Chromosome ena gene 1622207 1622692 . - . ID=gene:Rv1443c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1443c;logic_name=ena Chromosome ena mRNA 1622207 1622692 . - . ID=transcript:Rv1443c;Parent=gene:Rv1443c;biotype=protein_coding;transcript_id=Rv1443c Chromosome ena exon 1622207 1622692 . - . Parent=transcript:Rv1443c;Name=Rv1443c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1443c-1;rank=1 Chromosome ena CDS 1622207 1622692 . - 0 ID=CDS:Rv1443c;Parent=transcript:Rv1443c;protein_id=Rv1443c ### -Chromosome ena gene 1623287 1623697 . - . ID=gene:Rv1444c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1444c;logic_name=ena +Chromosome ena gene 1623287 1623697 . - . ID=gene:Rv1444c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1444c;logic_name=ena Chromosome ena mRNA 1623287 1623697 . - . ID=transcript:Rv1444c;Parent=gene:Rv1444c;biotype=protein_coding;transcript_id=Rv1444c Chromosome ena exon 1623287 1623697 . - . Parent=transcript:Rv1444c;Name=Rv1444c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1444c-1;rank=1 Chromosome ena CDS 1623287 1623697 . - 0 ID=CDS:Rv1444c;Parent=transcript:Rv1444c;protein_id=Rv1444c ### -Chromosome ena gene 1623714 1624457 . - . ID=gene:Rv1445c;Name=devB;biotype=protein_coding;description=Probable 6-phosphogluconolactonase DevB (6PGL);gene_id=Rv1445c;logic_name=ena +Chromosome ena gene 1623714 1624457 . - . ID=gene:Rv1445c;Name=devB;biotype=protein_coding;description=Probable 6-phosphogluconolactonase DevB (6PGL);gene_id=Rv1445c;logic_name=ena Chromosome ena mRNA 1623714 1624457 . - . ID=transcript:Rv1445c;Parent=gene:Rv1445c;Name=devB-1;biotype=protein_coding;transcript_id=Rv1445c Chromosome ena exon 1623714 1624457 . - . Parent=transcript:Rv1445c;Name=Rv1445c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1445c-1;rank=1 Chromosome ena CDS 1623714 1624457 . - 0 ID=CDS:Rv1445c;Parent=transcript:Rv1445c;protein_id=Rv1445c ### -Chromosome ena gene 1624454 1625365 . - . ID=gene:Rv1446c;Name=opcA;biotype=protein_coding;description=Putative OXPP cycle protein OpcA;gene_id=Rv1446c;logic_name=ena +Chromosome ena gene 1624454 1625365 . - . ID=gene:Rv1446c;Name=opcA;biotype=protein_coding;description=Putative OXPP cycle protein OpcA;gene_id=Rv1446c;logic_name=ena Chromosome ena mRNA 1624454 1625365 . - . ID=transcript:Rv1446c;Parent=gene:Rv1446c;Name=opcA-1;biotype=protein_coding;transcript_id=Rv1446c Chromosome ena exon 1624454 1625365 . - . Parent=transcript:Rv1446c;Name=Rv1446c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1446c-1;rank=1 Chromosome ena CDS 1624454 1625365 . - 0 ID=CDS:Rv1446c;Parent=transcript:Rv1446c;protein_id=Rv1446c ### -Chromosome ena gene 1625418 1626962 . - . ID=gene:Rv1447c;Name=zwf2;biotype=protein_coding;description=Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD);gene_id=Rv1447c;logic_name=ena +Chromosome ena gene 1625418 1626962 . - . ID=gene:Rv1447c;Name=zwf2;biotype=protein_coding;description=Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD);gene_id=Rv1447c;logic_name=ena Chromosome ena mRNA 1625418 1626962 . - . ID=transcript:Rv1447c;Parent=gene:Rv1447c;Name=zwf2-1;biotype=protein_coding;transcript_id=Rv1447c Chromosome ena exon 1625418 1626962 . - . Parent=transcript:Rv1447c;Name=Rv1447c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1447c-1;rank=1 Chromosome ena CDS 1625418 1626962 . - 0 ID=CDS:Rv1447c;Parent=transcript:Rv1447c;protein_id=Rv1447c ### -Chromosome ena gene 1626959 1628080 . - . ID=gene:Rv1448c;Name=tal;biotype=protein_coding;description=Probable transaldolase Tal;gene_id=Rv1448c;logic_name=ena +Chromosome ena gene 1626959 1628080 . - . ID=gene:Rv1448c;Name=tal;biotype=protein_coding;description=Probable transaldolase Tal;gene_id=Rv1448c;logic_name=ena Chromosome ena mRNA 1626959 1628080 . - . ID=transcript:Rv1448c;Parent=gene:Rv1448c;Name=tal-1;biotype=protein_coding;transcript_id=Rv1448c Chromosome ena exon 1626959 1628080 . - . Parent=transcript:Rv1448c;Name=Rv1448c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1448c-1;rank=1 Chromosome ena CDS 1626959 1628080 . - 0 ID=CDS:Rv1448c;Parent=transcript:Rv1448c;protein_id=Rv1448c ### -Chromosome ena gene 1628097 1630199 . - . ID=gene:Rv1449c;Name=tkt;biotype=protein_coding;description=Transketolase Tkt (TK);gene_id=Rv1449c;logic_name=ena +Chromosome ena gene 1628097 1630199 . - . ID=gene:Rv1449c;Name=tkt;biotype=protein_coding;description=Transketolase Tkt (TK);gene_id=Rv1449c;logic_name=ena Chromosome ena mRNA 1628097 1630199 . - . ID=transcript:Rv1449c;Parent=gene:Rv1449c;Name=tkt-1;biotype=protein_coding;transcript_id=Rv1449c Chromosome ena exon 1628097 1630199 . - . Parent=transcript:Rv1449c;Name=Rv1449c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1449c-1;rank=1 Chromosome ena CDS 1628097 1630199 . - 0 ID=CDS:Rv1449c;Parent=transcript:Rv1449c;protein_id=Rv1449c ### -Chromosome ena gene 1630638 1634627 . - . ID=gene:Rv1450c;Name=PE_PGRS27;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS27;gene_id=Rv1450c;logic_name=ena +Chromosome ena gene 1630638 1634627 . - . ID=gene:Rv1450c;Name=PE_PGRS27;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS27;gene_id=Rv1450c;logic_name=ena Chromosome ena mRNA 1630638 1634627 . - . ID=transcript:Rv1450c;Parent=gene:Rv1450c;Name=PE_PGRS27-1;biotype=protein_coding;transcript_id=Rv1450c Chromosome ena exon 1630638 1634627 . - . Parent=transcript:Rv1450c;Name=Rv1450c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1450c-1;rank=1 Chromosome ena CDS 1630638 1634627 . - 0 ID=CDS:Rv1450c;Parent=transcript:Rv1450c;protein_id=Rv1450c ### -Chromosome ena gene 1635029 1635955 . + . ID=gene:Rv1451;Name=ctaB;biotype=protein_coding;description=Probable cytochrome C oxidase assembly factor CtaB;gene_id=Rv1451;logic_name=ena +Chromosome ena gene 1635029 1635955 . + . ID=gene:Rv1451;Name=ctaB;biotype=protein_coding;description=Probable cytochrome C oxidase assembly factor CtaB;gene_id=Rv1451;logic_name=ena Chromosome ena mRNA 1635029 1635955 . + . ID=transcript:Rv1451;Parent=gene:Rv1451;Name=ctaB-1;biotype=protein_coding;transcript_id=Rv1451 Chromosome ena exon 1635029 1635955 . + . Parent=transcript:Rv1451;Name=Rv1451-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1451-1;rank=1 Chromosome ena CDS 1635029 1635955 . + 0 ID=CDS:Rv1451;Parent=transcript:Rv1451;protein_id=Rv1451 ### -Chromosome ena gene 1636004 1638229 . - . ID=gene:Rv1452c;Name=PE_PGRS28;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS28;gene_id=Rv1452c;logic_name=ena +Chromosome ena gene 1636004 1638229 . - . ID=gene:Rv1452c;Name=PE_PGRS28;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS28;gene_id=Rv1452c;logic_name=ena Chromosome ena mRNA 1636004 1638229 . - . ID=transcript:Rv1452c;Parent=gene:Rv1452c;Name=PE_PGRS28-1;biotype=protein_coding;transcript_id=Rv1452c Chromosome ena exon 1636004 1638229 . - . Parent=transcript:Rv1452c;Name=Rv1452c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1452c-1;rank=1 Chromosome ena CDS 1636004 1638229 . - 0 ID=CDS:Rv1452c;Parent=transcript:Rv1452c;protein_id=Rv1452c ### -Chromosome ena gene 1638381 1639646 . + . ID=gene:Rv1453;biotype=protein_coding;description=Possible transcriptional activator protein;gene_id=Rv1453;logic_name=ena +Chromosome ena gene 1638381 1639646 . + . ID=gene:Rv1453;biotype=protein_coding;description=Possible transcriptional activator protein;gene_id=Rv1453;logic_name=ena Chromosome ena mRNA 1638381 1639646 . + . ID=transcript:Rv1453;Parent=gene:Rv1453;biotype=protein_coding;transcript_id=Rv1453 Chromosome ena exon 1638381 1639646 . + . Parent=transcript:Rv1453;Name=Rv1453-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1453-1;rank=1 Chromosome ena CDS 1638381 1639646 . + 0 ID=CDS:Rv1453;Parent=transcript:Rv1453;protein_id=Rv1453 ### -Chromosome ena gene 1639674 1640660 . - . ID=gene:Rv1454c;Name=qor;biotype=protein_coding;description=Probable quinone reductase Qor (NADPH:quinone reductase) (zeta-crystallin homolog protein);gene_id=Rv1454c;logic_name=ena +Chromosome ena gene 1639674 1640660 . - . ID=gene:Rv1454c;Name=qor;biotype=protein_coding;description=Probable quinone reductase Qor (NADPH:quinone reductase) (zeta-crystallin homolog protein);gene_id=Rv1454c;logic_name=ena Chromosome ena mRNA 1639674 1640660 . - . ID=transcript:Rv1454c;Parent=gene:Rv1454c;Name=qor-1;biotype=protein_coding;transcript_id=Rv1454c Chromosome ena exon 1639674 1640660 . - . Parent=transcript:Rv1454c;Name=Rv1454c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1454c-1;rank=1 Chromosome ena CDS 1639674 1640660 . - 0 ID=CDS:Rv1454c;Parent=transcript:Rv1454c;protein_id=Rv1454c ### -Chromosome ena gene 1640680 1641543 . + . ID=gene:Rv1455;biotype=protein_coding;description=Conserved protein;gene_id=Rv1455;logic_name=ena +Chromosome ena gene 1640680 1641543 . + . ID=gene:Rv1455;biotype=protein_coding;description=Conserved protein;gene_id=Rv1455;logic_name=ena Chromosome ena mRNA 1640680 1641543 . + . ID=transcript:Rv1455;Parent=gene:Rv1455;biotype=protein_coding;transcript_id=Rv1455 Chromosome ena exon 1640680 1641543 . + . Parent=transcript:Rv1455;Name=Rv1455-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1455-1;rank=1 Chromosome ena CDS 1640680 1641543 . + 0 ID=CDS:Rv1455;Parent=transcript:Rv1455;protein_id=Rv1455 ### -Chromosome ena gene 1641493 1642425 . - . ID=gene:Rv1456c;biotype=protein_coding;description=Probable unidentified antibiotic-transport integral membrane ABC transporter;gene_id=Rv1456c;logic_name=ena +Chromosome ena gene 1641493 1642425 . - . ID=gene:Rv1456c;biotype=protein_coding;description=Probable unidentified antibiotic-transport integral membrane ABC transporter;gene_id=Rv1456c;logic_name=ena Chromosome ena mRNA 1641493 1642425 . - . ID=transcript:Rv1456c;Parent=gene:Rv1456c;biotype=protein_coding;transcript_id=Rv1456c Chromosome ena exon 1641493 1642425 . - . Parent=transcript:Rv1456c;Name=Rv1456c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1456c-1;rank=1 Chromosome ena CDS 1641493 1642425 . - 0 ID=CDS:Rv1456c;Parent=transcript:Rv1456c;protein_id=Rv1456c ### -Chromosome ena gene 1642537 1643322 . - . ID=gene:Rv1457c;biotype=protein_coding;description=Probable unidentified antibiotic-transport integral membrane ABC transporter;gene_id=Rv1457c;logic_name=ena +Chromosome ena gene 1642537 1643322 . - . ID=gene:Rv1457c;biotype=protein_coding;description=Probable unidentified antibiotic-transport integral membrane ABC transporter;gene_id=Rv1457c;logic_name=ena Chromosome ena mRNA 1642537 1643322 . - . ID=transcript:Rv1457c;Parent=gene:Rv1457c;biotype=protein_coding;transcript_id=Rv1457c Chromosome ena exon 1642537 1643322 . - . Parent=transcript:Rv1457c;Name=Rv1457c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1457c-1;rank=1 Chromosome ena CDS 1642537 1643322 . - 0 ID=CDS:Rv1457c;Parent=transcript:Rv1457c;protein_id=Rv1457c ### -Chromosome ena gene 1643319 1644260 . - . ID=gene:Rv1458c;biotype=protein_coding;description=Probable unidentified antibiotic-transport ATP-binding protein ABC transporter;gene_id=Rv1458c;logic_name=ena +Chromosome ena gene 1643319 1644260 . - . ID=gene:Rv1458c;biotype=protein_coding;description=Probable unidentified antibiotic-transport ATP-binding protein ABC transporter;gene_id=Rv1458c;logic_name=ena Chromosome ena mRNA 1643319 1644260 . - . ID=transcript:Rv1458c;Parent=gene:Rv1458c;biotype=protein_coding;transcript_id=Rv1458c Chromosome ena exon 1643319 1644260 . - . Parent=transcript:Rv1458c;Name=Rv1458c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1458c-1;rank=1 Chromosome ena CDS 1643319 1644260 . - 0 ID=CDS:Rv1458c;Parent=transcript:Rv1458c;protein_id=Rv1458c ### -Chromosome ena gene 1644363 1646138 . - . ID=gene:Rv1459c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv1459c;logic_name=ena +Chromosome ena gene 1644363 1646138 . - . ID=gene:Rv1459c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv1459c;logic_name=ena Chromosome ena mRNA 1644363 1646138 . - . ID=transcript:Rv1459c;Parent=gene:Rv1459c;biotype=protein_coding;transcript_id=Rv1459c Chromosome ena exon 1644363 1646138 . - . Parent=transcript:Rv1459c;Name=Rv1459c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1459c-1;rank=1 Chromosome ena CDS 1644363 1646138 . - 0 ID=CDS:Rv1459c;Parent=transcript:Rv1459c;protein_id=Rv1459c ### -Chromosome ena gene 1646186 1646992 . + . ID=gene:Rv1460;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1460;logic_name=ena +Chromosome ena gene 1646186 1646992 . + . ID=gene:Rv1460;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1460;logic_name=ena Chromosome ena mRNA 1646186 1646992 . + . ID=transcript:Rv1460;Parent=gene:Rv1460;biotype=protein_coding;transcript_id=Rv1460 Chromosome ena exon 1646186 1646992 . + . Parent=transcript:Rv1460;Name=Rv1460-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1460-1;rank=1 Chromosome ena CDS 1646186 1646992 . + 0 ID=CDS:Rv1460;Parent=transcript:Rv1460;protein_id=Rv1460 ### -Chromosome ena gene 1646989 1649529 . + . ID=gene:Rv1461;biotype=protein_coding;description=Conserved protein;gene_id=Rv1461;logic_name=ena +Chromosome ena gene 1646989 1649529 . + . ID=gene:Rv1461;biotype=protein_coding;description=Conserved protein;gene_id=Rv1461;logic_name=ena Chromosome ena mRNA 1646989 1649529 . + . ID=transcript:Rv1461;Parent=gene:Rv1461;biotype=protein_coding;transcript_id=Rv1461 Chromosome ena exon 1646989 1649529 . + . Parent=transcript:Rv1461;Name=Rv1461-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1461-1;rank=1 Chromosome ena CDS 1646989 1649529 . + 0 ID=CDS:Rv1461;Parent=transcript:Rv1461;protein_id=Rv1461 ### -Chromosome ena gene 1649526 1650719 . + . ID=gene:Rv1462;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1462;logic_name=ena +Chromosome ena gene 1649526 1650719 . + . ID=gene:Rv1462;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1462;logic_name=ena Chromosome ena mRNA 1649526 1650719 . + . ID=transcript:Rv1462;Parent=gene:Rv1462;biotype=protein_coding;transcript_id=Rv1462 Chromosome ena exon 1649526 1650719 . + . Parent=transcript:Rv1462;Name=Rv1462-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1462-1;rank=1 Chromosome ena CDS 1649526 1650719 . + 0 ID=CDS:Rv1462;Parent=transcript:Rv1462;protein_id=Rv1462 ### -Chromosome ena gene 1650716 1651516 . + . ID=gene:Rv1463;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv1463;logic_name=ena +Chromosome ena gene 1650716 1651516 . + . ID=gene:Rv1463;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv1463;logic_name=ena Chromosome ena mRNA 1650716 1651516 . + . ID=transcript:Rv1463;Parent=gene:Rv1463;biotype=protein_coding;transcript_id=Rv1463 Chromosome ena exon 1650716 1651516 . + . Parent=transcript:Rv1463;Name=Rv1463-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1463-1;rank=1 Chromosome ena CDS 1650716 1651516 . + 0 ID=CDS:Rv1463;Parent=transcript:Rv1463;protein_id=Rv1463 ### -Chromosome ena gene 1651518 1652771 . + . ID=gene:Rv1464;Name=csd;biotype=protein_coding;description=Probable cysteine desulfurase Csd;gene_id=Rv1464;logic_name=ena +Chromosome ena gene 1651518 1652771 . + . ID=gene:Rv1464;Name=csd;biotype=protein_coding;description=Probable cysteine desulfurase Csd;gene_id=Rv1464;logic_name=ena Chromosome ena mRNA 1651518 1652771 . + . ID=transcript:Rv1464;Parent=gene:Rv1464;Name=csd-1;biotype=protein_coding;transcript_id=Rv1464 Chromosome ena exon 1651518 1652771 . + . Parent=transcript:Rv1464;Name=Rv1464-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1464-1;rank=1 Chromosome ena CDS 1651518 1652771 . + 0 ID=CDS:Rv1464;Parent=transcript:Rv1464;protein_id=Rv1464 ### -Chromosome ena gene 1652768 1653256 . + . ID=gene:Rv1465;biotype=protein_coding;description=Possible nitrogen fixation related protein;gene_id=Rv1465;logic_name=ena +Chromosome ena gene 1652768 1653256 . + . ID=gene:Rv1465;biotype=protein_coding;description=Possible nitrogen fixation related protein;gene_id=Rv1465;logic_name=ena Chromosome ena mRNA 1652768 1653256 . + . ID=transcript:Rv1465;Parent=gene:Rv1465;biotype=protein_coding;transcript_id=Rv1465 Chromosome ena exon 1652768 1653256 . + . Parent=transcript:Rv1465;Name=Rv1465-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1465-1;rank=1 Chromosome ena CDS 1652768 1653256 . + 0 ID=CDS:Rv1465;Parent=transcript:Rv1465;protein_id=Rv1465 ### -Chromosome ena gene 1653231 1653578 . + . ID=gene:Rv1466;biotype=protein_coding;description=Conserved protein;gene_id=Rv1466;logic_name=ena +Chromosome ena gene 1653231 1653578 . + . ID=gene:Rv1466;biotype=protein_coding;description=Conserved protein;gene_id=Rv1466;logic_name=ena Chromosome ena mRNA 1653231 1653578 . + . ID=transcript:Rv1466;Parent=gene:Rv1466;biotype=protein_coding;transcript_id=Rv1466 Chromosome ena exon 1653231 1653578 . + . Parent=transcript:Rv1466;Name=Rv1466-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1466-1;rank=1 Chromosome ena CDS 1653231 1653578 . + 0 ID=CDS:Rv1466;Parent=transcript:Rv1466;protein_id=Rv1466 ### -Chromosome ena gene 1653673 1655502 . - . ID=gene:Rv1467c;Name=fadE15;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE15;gene_id=Rv1467c;logic_name=ena +Chromosome ena gene 1653673 1655502 . - . ID=gene:Rv1467c;Name=fadE15;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE15;gene_id=Rv1467c;logic_name=ena Chromosome ena mRNA 1653673 1655502 . - . ID=transcript:Rv1467c;Parent=gene:Rv1467c;Name=fadE15-1;biotype=protein_coding;transcript_id=Rv1467c Chromosome ena exon 1653673 1655502 . - . Parent=transcript:Rv1467c;Name=Rv1467c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1467c-1;rank=1 Chromosome ena CDS 1653673 1655502 . - 0 ID=CDS:Rv1467c;Parent=transcript:Rv1467c;protein_id=Rv1467c ### -Chromosome ena gene 1655609 1656721 . - . ID=gene:Rv1468c;Name=PE_PGRS29;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS29;gene_id=Rv1468c;logic_name=ena +Chromosome ena gene 1655609 1656721 . - . ID=gene:Rv1468c;Name=PE_PGRS29;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS29;gene_id=Rv1468c;logic_name=ena Chromosome ena mRNA 1655609 1656721 . - . ID=transcript:Rv1468c;Parent=gene:Rv1468c;Name=PE_PGRS29-1;biotype=protein_coding;transcript_id=Rv1468c Chromosome ena exon 1655609 1656721 . - . Parent=transcript:Rv1468c;Name=Rv1468c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1468c-1;rank=1 Chromosome ena CDS 1655609 1656721 . - 0 ID=CDS:Rv1468c;Parent=transcript:Rv1468c;protein_id=Rv1468c ### -Chromosome ena gene 1656963 1658936 . + . ID=gene:Rv1469;Name=ctpD;biotype=protein_coding;description=Probable cation transporter P-type ATPase D CtpD;gene_id=Rv1469;logic_name=ena +Chromosome ena gene 1656963 1658936 . + . ID=gene:Rv1469;Name=ctpD;biotype=protein_coding;description=Probable cation transporter P-type ATPase D CtpD;gene_id=Rv1469;logic_name=ena Chromosome ena mRNA 1656963 1658936 . + . ID=transcript:Rv1469;Parent=gene:Rv1469;Name=ctpD-1;biotype=protein_coding;transcript_id=Rv1469 Chromosome ena exon 1656963 1658936 . + . Parent=transcript:Rv1469;Name=Rv1469-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1469-1;rank=1 Chromosome ena CDS 1656963 1658936 . + 0 ID=CDS:Rv1469;Parent=transcript:Rv1469;protein_id=Rv1469 ### -Chromosome ena gene 1658980 1659354 . + . ID=gene:Rv1470;Name=trxA;biotype=protein_coding;description=Probable thioredoxin TrxA;gene_id=Rv1470;logic_name=ena +Chromosome ena gene 1658980 1659354 . + . ID=gene:Rv1470;Name=trxA;biotype=protein_coding;description=Probable thioredoxin TrxA;gene_id=Rv1470;logic_name=ena Chromosome ena mRNA 1658980 1659354 . + . ID=transcript:Rv1470;Parent=gene:Rv1470;Name=trxA-1;biotype=protein_coding;transcript_id=Rv1470 Chromosome ena exon 1658980 1659354 . + . Parent=transcript:Rv1470;Name=Rv1470-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1470-1;rank=1 Chromosome ena CDS 1658980 1659354 . + 0 ID=CDS:Rv1470;Parent=transcript:Rv1470;protein_id=Rv1470 ### -Chromosome ena gene 1659370 1659741 . + . ID=gene:Rv1471;Name=trxB1;biotype=protein_coding;description=Probable thioredoxin TrxB1;gene_id=Rv1471;logic_name=ena +Chromosome ena gene 1659370 1659741 . + . ID=gene:Rv1471;Name=trxB1;biotype=protein_coding;description=Probable thioredoxin TrxB1;gene_id=Rv1471;logic_name=ena Chromosome ena mRNA 1659370 1659741 . + . ID=transcript:Rv1471;Parent=gene:Rv1471;Name=trxB1-1;biotype=protein_coding;transcript_id=Rv1471 Chromosome ena exon 1659370 1659741 . + . Parent=transcript:Rv1471;Name=Rv1471-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1471-1;rank=1 Chromosome ena CDS 1659370 1659741 . + 0 ID=CDS:Rv1471;Parent=transcript:Rv1471;protein_id=Rv1471 ### -Chromosome ena gene 1659763 1660620 . + . ID=gene:Rv1472;Name=echA12;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA12 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1472;logic_name=ena +Chromosome ena gene 1659763 1660620 . + . ID=gene:Rv1472;Name=echA12;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA12 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1472;logic_name=ena Chromosome ena mRNA 1659763 1660620 . + . ID=transcript:Rv1472;Parent=gene:Rv1472;Name=echA12-1;biotype=protein_coding;transcript_id=Rv1472 Chromosome ena exon 1659763 1660620 . + . Parent=transcript:Rv1472;Name=Rv1472-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1472-1;rank=1 Chromosome ena CDS 1659763 1660620 . + 0 ID=CDS:Rv1472;Parent=transcript:Rv1472;protein_id=Rv1472 ### -Chromosome ena gene 1660656 1662284 . + . ID=gene:Rv1473;biotype=protein_coding;description=Probable macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1473;logic_name=ena +Chromosome ena gene 1660656 1662284 . + . ID=gene:Rv1473;biotype=protein_coding;description=Probable macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1473;logic_name=ena Chromosome ena mRNA 1660656 1662284 . + . ID=transcript:Rv1473;Parent=gene:Rv1473;biotype=protein_coding;transcript_id=Rv1473 Chromosome ena exon 1660656 1662284 . + . Parent=transcript:Rv1473;Name=Rv1473-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1473-1;rank=1 Chromosome ena CDS 1660656 1662284 . + 0 ID=CDS:Rv1473;Parent=transcript:Rv1473;protein_id=Rv1473 ### -Chromosome ena gene 1662381 1662572 . + . ID=gene:Rv1473A;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1473A;logic_name=ena +Chromosome ena gene 1662381 1662572 . + . ID=gene:Rv1473A;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1473A;logic_name=ena Chromosome ena mRNA 1662381 1662572 . + . ID=transcript:Rv1473A;Parent=gene:Rv1473A;biotype=protein_coding;transcript_id=Rv1473A Chromosome ena exon 1662381 1662572 . + . Parent=transcript:Rv1473A;Name=Rv1473A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1473A-1;rank=1 Chromosome ena CDS 1662381 1662572 . + 0 ID=CDS:Rv1473A;Parent=transcript:Rv1473A;protein_id=Rv1473A ### -Chromosome ena gene 1662641 1663204 . - . ID=gene:Rv1474c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1474c;logic_name=ena +Chromosome ena gene 1662641 1663204 . - . ID=gene:Rv1474c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1474c;logic_name=ena Chromosome ena mRNA 1662641 1663204 . - . ID=transcript:Rv1474c;Parent=gene:Rv1474c;biotype=protein_coding;transcript_id=Rv1474c Chromosome ena exon 1662641 1663204 . - . Parent=transcript:Rv1474c;Name=Rv1474c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1474c-1;rank=1 Chromosome ena CDS 1662641 1663204 . - 0 ID=CDS:Rv1474c;Parent=transcript:Rv1474c;protein_id=Rv1474c ### -Chromosome ena gene 1663215 1666046 . - . ID=gene:Rv1475c;Name=acn;biotype=protein_coding;description=Probable iron-regulated aconitate hydratase Acn (citrate hydro-lyase) (aconitase);gene_id=Rv1475c;logic_name=ena +Chromosome ena gene 1663215 1666046 . - . ID=gene:Rv1475c;Name=acn;biotype=protein_coding;description=Probable iron-regulated aconitate hydratase Acn (citrate hydro-lyase) (aconitase);gene_id=Rv1475c;logic_name=ena Chromosome ena mRNA 1663215 1666046 . - . ID=transcript:Rv1475c;Parent=gene:Rv1475c;Name=acn-1;biotype=protein_coding;transcript_id=Rv1475c Chromosome ena exon 1663215 1666046 . - . Parent=transcript:Rv1475c;Name=Rv1475c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1475c-1;rank=1 Chromosome ena CDS 1663215 1666046 . - 0 ID=CDS:Rv1475c;Parent=transcript:Rv1475c;protein_id=Rv1475c ### -Chromosome ena gene 1666204 1666764 . + . ID=gene:Rv1476;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1476;logic_name=ena +Chromosome ena gene 1666204 1666764 . + . ID=gene:Rv1476;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv1476;logic_name=ena Chromosome ena mRNA 1666204 1666764 . + . ID=transcript:Rv1476;Parent=gene:Rv1476;biotype=protein_coding;transcript_id=Rv1476 Chromosome ena exon 1666204 1666764 . + . Parent=transcript:Rv1476;Name=Rv1476-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1476-1;rank=1 Chromosome ena CDS 1666204 1666764 . + 0 ID=CDS:Rv1476;Parent=transcript:Rv1476;protein_id=Rv1476 ### -Chromosome ena gene 1666990 1668408 . + . ID=gene:Rv1477;Name=ripA;biotype=protein_coding;description=Peptidoglycan hydrolase;gene_id=Rv1477;logic_name=ena +Chromosome ena gene 1666990 1668408 . + . ID=gene:Rv1477;Name=ripA;biotype=protein_coding;description=Peptidoglycan hydrolase;gene_id=Rv1477;logic_name=ena Chromosome ena mRNA 1666990 1668408 . + . ID=transcript:Rv1477;Parent=gene:Rv1477;Name=ripA-1;biotype=protein_coding;transcript_id=Rv1477 Chromosome ena exon 1666990 1668408 . + . Parent=transcript:Rv1477;Name=Rv1477-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1477-1;rank=1 Chromosome ena CDS 1666990 1668408 . + 0 ID=CDS:Rv1477;Parent=transcript:Rv1477;protein_id=Rv1477 ### -Chromosome ena gene 1668419 1669144 . + . ID=gene:Rv1478;biotype=protein_coding;description=Possible invasion protein;gene_id=Rv1478;logic_name=ena +Chromosome ena gene 1668419 1669144 . + . ID=gene:Rv1478;biotype=protein_coding;description=Possible invasion protein;gene_id=Rv1478;logic_name=ena Chromosome ena mRNA 1668419 1669144 . + . ID=transcript:Rv1478;Parent=gene:Rv1478;biotype=protein_coding;transcript_id=Rv1478 Chromosome ena exon 1668419 1669144 . + . Parent=transcript:Rv1478;Name=Rv1478-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1478-1;rank=1 Chromosome ena CDS 1668419 1669144 . + 0 ID=CDS:Rv1478;Parent=transcript:Rv1478;protein_id=Rv1478 ### -Chromosome ena gene 1669283 1670416 . + . ID=gene:Rv1479;Name=moxR1;biotype=protein_coding;description=Probable transcriptional regulatory protein MoxR1;gene_id=Rv1479;logic_name=ena +Chromosome ena gene 1669283 1670416 . + . ID=gene:Rv1479;Name=moxR1;biotype=protein_coding;description=Probable transcriptional regulatory protein MoxR1;gene_id=Rv1479;logic_name=ena Chromosome ena mRNA 1669283 1670416 . + . ID=transcript:Rv1479;Parent=gene:Rv1479;Name=moxR1-1;biotype=protein_coding;transcript_id=Rv1479 Chromosome ena exon 1669283 1670416 . + . Parent=transcript:Rv1479;Name=Rv1479-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1479-1;rank=1 Chromosome ena CDS 1669283 1670416 . + 0 ID=CDS:Rv1479;Parent=transcript:Rv1479;protein_id=Rv1479 ### -Chromosome ena gene 1670413 1671366 . + . ID=gene:Rv1480;biotype=protein_coding;description=Conserved protein;gene_id=Rv1480;logic_name=ena +Chromosome ena gene 1670413 1671366 . + . ID=gene:Rv1480;biotype=protein_coding;description=Conserved protein;gene_id=Rv1480;logic_name=ena Chromosome ena mRNA 1670413 1671366 . + . ID=transcript:Rv1480;Parent=gene:Rv1480;biotype=protein_coding;transcript_id=Rv1480 Chromosome ena exon 1670413 1671366 . + . Parent=transcript:Rv1480;Name=Rv1480-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1480-1;rank=1 Chromosome ena CDS 1670413 1671366 . + 0 ID=CDS:Rv1480;Parent=transcript:Rv1480;protein_id=Rv1480 ### -Chromosome ena gene 1671377 1672384 . + . ID=gene:Rv1481;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1481;logic_name=ena +Chromosome ena gene 1671377 1672384 . + . ID=gene:Rv1481;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1481;logic_name=ena Chromosome ena mRNA 1671377 1672384 . + . ID=transcript:Rv1481;Parent=gene:Rv1481;biotype=protein_coding;transcript_id=Rv1481 Chromosome ena exon 1671377 1672384 . + . Parent=transcript:Rv1481;Name=Rv1481-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1481-1;rank=1 Chromosome ena CDS 1671377 1672384 . + 0 ID=CDS:Rv1481;Parent=transcript:Rv1481;protein_id=Rv1481 ### -Chromosome ena gene 1672457 1673299 . - . ID=gene:Rv1482c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1482c;logic_name=ena +Chromosome ena gene 1672457 1673299 . - . ID=gene:Rv1482c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1482c;logic_name=ena Chromosome ena mRNA 1672457 1673299 . - . ID=transcript:Rv1482c;Parent=gene:Rv1482c;biotype=protein_coding;transcript_id=Rv1482c Chromosome ena exon 1672457 1673299 . - . Parent=transcript:Rv1482c;Name=Rv1482c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1482c-1;rank=1 Chromosome ena CDS 1672457 1673299 . - 0 ID=CDS:Rv1482c;Parent=transcript:Rv1482c;protein_id=Rv1482c ### -Chromosome ena gene 1673440 1674183 . + . ID=gene:Rv1483;Name=fabG1;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] reductase FabG1 (3-ketoacyl-acyl carrier protein reductase) (mycolic acid biosynthesis a protein);gene_id=Rv1483;logic_name=ena +Chromosome ena gene 1673440 1674183 . + . ID=gene:Rv1483;Name=fabG1;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] reductase FabG1 (3-ketoacyl-acyl carrier protein reductase) (mycolic acid biosynthesis a protein);gene_id=Rv1483;logic_name=ena Chromosome ena mRNA 1673440 1674183 . + . ID=transcript:Rv1483;Parent=gene:Rv1483;Name=fabG1-1;biotype=protein_coding;transcript_id=Rv1483 Chromosome ena exon 1673440 1674183 . + . Parent=transcript:Rv1483;Name=Rv1483-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1483-1;rank=1 Chromosome ena CDS 1673440 1674183 . + 0 ID=CDS:Rv1483;Parent=transcript:Rv1483;protein_id=Rv1483 ### -Chromosome ena gene 1674202 1675011 . + . ID=gene:Rv1484;Name=inhA;biotype=protein_coding;description=NADH-dependent enoyl-[acyl-carrier-protein] reductase InhA (NADH-dependent enoyl-ACP reductase);gene_id=Rv1484;logic_name=ena +Chromosome ena gene 1674202 1675011 . + . ID=gene:Rv1484;Name=inhA;biotype=protein_coding;description=NADH-dependent enoyl-[acyl-carrier-protein] reductase InhA (NADH-dependent enoyl-ACP reductase);gene_id=Rv1484;logic_name=ena Chromosome ena mRNA 1674202 1675011 . + . ID=transcript:Rv1484;Parent=gene:Rv1484;Name=inhA-1;biotype=protein_coding;transcript_id=Rv1484 Chromosome ena exon 1674202 1675011 . + . Parent=transcript:Rv1484;Name=Rv1484-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1484-1;rank=1 Chromosome ena CDS 1674202 1675011 . + 0 ID=CDS:Rv1484;Parent=transcript:Rv1484;protein_id=Rv1484 ### -Chromosome ena gene 1675017 1676051 . + . ID=gene:Rv1485;Name=hemZ;biotype=protein_coding;description=Ferrochelatase HemZ (protoheme ferro-lyase) (heme synthetase);gene_id=Rv1485;logic_name=ena +Chromosome ena gene 1675017 1676051 . + . ID=gene:Rv1485;Name=hemZ;biotype=protein_coding;description=Ferrochelatase HemZ (protoheme ferro-lyase) (heme synthetase);gene_id=Rv1485;logic_name=ena Chromosome ena mRNA 1675017 1676051 . + . ID=transcript:Rv1485;Parent=gene:Rv1485;Name=hemZ-1;biotype=protein_coding;transcript_id=Rv1485 Chromosome ena exon 1675017 1676051 . + . Parent=transcript:Rv1485;Name=Rv1485-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1485-1;rank=1 Chromosome ena CDS 1675017 1676051 . + 0 ID=CDS:Rv1485;Parent=transcript:Rv1485;protein_id=Rv1485 ### -Chromosome ena gene 1676017 1676883 . - . ID=gene:Rv1486c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1486c;logic_name=ena +Chromosome ena gene 1676017 1676883 . - . ID=gene:Rv1486c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1486c;logic_name=ena Chromosome ena mRNA 1676017 1676883 . - . ID=transcript:Rv1486c;Parent=gene:Rv1486c;biotype=protein_coding;transcript_id=Rv1486c Chromosome ena exon 1676017 1676883 . - . Parent=transcript:Rv1486c;Name=Rv1486c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1486c-1;rank=1 Chromosome ena CDS 1676017 1676883 . - 0 ID=CDS:Rv1486c;Parent=transcript:Rv1486c;protein_id=Rv1486c ### -Chromosome ena gene 1676941 1677375 . + . ID=gene:Rv1487;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1487;logic_name=ena +Chromosome ena gene 1676941 1677375 . + . ID=gene:Rv1487;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1487;logic_name=ena Chromosome ena mRNA 1676941 1677375 . + . ID=transcript:Rv1487;Parent=gene:Rv1487;biotype=protein_coding;transcript_id=Rv1487 Chromosome ena exon 1676941 1677375 . + . Parent=transcript:Rv1487;Name=Rv1487-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1487-1;rank=1 Chromosome ena CDS 1676941 1677375 . + 0 ID=CDS:Rv1487;Parent=transcript:Rv1487;protein_id=Rv1487 ### -Chromosome ena gene 1677397 1678542 . + . ID=gene:Rv1488;biotype=protein_coding;description=Possible exported conserved protein;gene_id=Rv1488;logic_name=ena +Chromosome ena gene 1677397 1678542 . + . ID=gene:Rv1488;biotype=protein_coding;description=Possible exported conserved protein;gene_id=Rv1488;logic_name=ena Chromosome ena mRNA 1677397 1678542 . + . ID=transcript:Rv1488;Parent=gene:Rv1488;biotype=protein_coding;transcript_id=Rv1488 Chromosome ena exon 1677397 1678542 . + . Parent=transcript:Rv1488;Name=Rv1488-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1488-1;rank=1 Chromosome ena CDS 1677397 1678542 . + 0 ID=CDS:Rv1488;Parent=transcript:Rv1488;protein_id=Rv1488 ### -Chromosome ena gene 1678552 1678908 . + . ID=gene:Rv1489;biotype=protein_coding;description=Conserved protein;gene_id=Rv1489;logic_name=ena +Chromosome ena gene 1678552 1678908 . + . ID=gene:Rv1489;biotype=protein_coding;description=Conserved protein;gene_id=Rv1489;logic_name=ena Chromosome ena mRNA 1678552 1678908 . + . ID=transcript:Rv1489;Parent=gene:Rv1489;biotype=protein_coding;transcript_id=Rv1489 Chromosome ena exon 1678552 1678908 . + . Parent=transcript:Rv1489;Name=Rv1489-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1489-1;rank=1 Chromosome ena CDS 1678552 1678908 . + 0 ID=CDS:Rv1489;Parent=transcript:Rv1489;protein_id=Rv1489 ### -Chromosome ena gene 1678942 1679172 . + . ID=gene:Rv1489A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1489A;logic_name=ena +Chromosome ena gene 1678942 1679172 . + . ID=gene:Rv1489A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1489A;logic_name=ena Chromosome ena mRNA 1678942 1679172 . + . ID=transcript:Rv1489A;Parent=gene:Rv1489A;biotype=protein_coding;transcript_id=Rv1489A Chromosome ena exon 1678942 1679172 . + . Parent=transcript:Rv1489A;Name=Rv1489A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1489A-1;rank=1 Chromosome ena CDS 1678942 1679172 . + 0 ID=CDS:Rv1489A;Parent=transcript:Rv1489A;protein_id=Rv1489A ### -Chromosome ena gene 1679322 1680629 . + . ID=gene:Rv1490;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1490;logic_name=ena +Chromosome ena gene 1679322 1680629 . + . ID=gene:Rv1490;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1490;logic_name=ena Chromosome ena mRNA 1679322 1680629 . + . ID=transcript:Rv1490;Parent=gene:Rv1490;biotype=protein_coding;transcript_id=Rv1490 Chromosome ena exon 1679322 1680629 . + . Parent=transcript:Rv1490;Name=Rv1490-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1490-1;rank=1 Chromosome ena CDS 1679322 1680629 . + 0 ID=CDS:Rv1490;Parent=transcript:Rv1490;protein_id=Rv1490 ### -Chromosome ena gene 1681208 1681966 . - . ID=gene:Rv1491c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1491c;logic_name=ena +Chromosome ena gene 1681208 1681966 . - . ID=gene:Rv1491c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1491c;logic_name=ena Chromosome ena mRNA 1681208 1681966 . - . ID=transcript:Rv1491c;Parent=gene:Rv1491c;biotype=protein_coding;transcript_id=Rv1491c Chromosome ena exon 1681208 1681966 . - . Parent=transcript:Rv1491c;Name=Rv1491c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1491c-1;rank=1 Chromosome ena CDS 1681208 1681966 . - 0 ID=CDS:Rv1491c;Parent=transcript:Rv1491c;protein_id=Rv1491c ### -Chromosome ena gene 1682157 1684004 . + . ID=gene:Rv1492;Name=mutA;biotype=protein_coding;description=Probable methylmalonyl-CoA mutase small subunit MutA (MCM);gene_id=Rv1492;logic_name=ena +Chromosome ena gene 1682157 1684004 . + . ID=gene:Rv1492;Name=mutA;biotype=protein_coding;description=Probable methylmalonyl-CoA mutase small subunit MutA (MCM);gene_id=Rv1492;logic_name=ena Chromosome ena mRNA 1682157 1684004 . + . ID=transcript:Rv1492;Parent=gene:Rv1492;Name=mutA-1;biotype=protein_coding;transcript_id=Rv1492 Chromosome ena exon 1682157 1684004 . + . Parent=transcript:Rv1492;Name=Rv1492-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1492-1;rank=1 Chromosome ena CDS 1682157 1684004 . + 0 ID=CDS:Rv1492;Parent=transcript:Rv1492;protein_id=Rv1492 ### -Chromosome ena gene 1684005 1686257 . + . ID=gene:Rv1493;Name=mutB;biotype=protein_coding;description=Probable methylmalonyl-CoA mutase large subunit MutB (MCM);gene_id=Rv1493;logic_name=ena +Chromosome ena gene 1684005 1686257 . + . ID=gene:Rv1493;Name=mutB;biotype=protein_coding;description=Probable methylmalonyl-CoA mutase large subunit MutB (MCM);gene_id=Rv1493;logic_name=ena Chromosome ena mRNA 1684005 1686257 . + . ID=transcript:Rv1493;Parent=gene:Rv1493;Name=mutB-1;biotype=protein_coding;transcript_id=Rv1493 Chromosome ena exon 1684005 1686257 . + . Parent=transcript:Rv1493;Name=Rv1493-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1493-1;rank=1 Chromosome ena CDS 1684005 1686257 . + 0 ID=CDS:Rv1493;Parent=transcript:Rv1493;protein_id=Rv1493 ### -Chromosome ena gene 1686271 1686573 . + . ID=gene:Rv1494;Name=mazE4;biotype=protein_coding;description=Possible antitoxin MazE4;gene_id=Rv1494;logic_name=ena +Chromosome ena gene 1686271 1686573 . + . ID=gene:Rv1494;Name=mazE4;biotype=protein_coding;description=Possible antitoxin MazE4;gene_id=Rv1494;logic_name=ena Chromosome ena mRNA 1686271 1686573 . + . ID=transcript:Rv1494;Parent=gene:Rv1494;Name=mazE4-1;biotype=protein_coding;transcript_id=Rv1494 Chromosome ena exon 1686271 1686573 . + . Parent=transcript:Rv1494;Name=Rv1494-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1494-1;rank=1 Chromosome ena CDS 1686271 1686573 . + 0 ID=CDS:Rv1494;Parent=transcript:Rv1494;protein_id=Rv1494 ### -Chromosome ena gene 1686570 1686887 . + . ID=gene:Rv1495;Name=mazF4;biotype=protein_coding;description=Possible toxin MazF4;gene_id=Rv1495;logic_name=ena +Chromosome ena gene 1686570 1686887 . + . ID=gene:Rv1495;Name=mazF4;biotype=protein_coding;description=Possible toxin MazF4;gene_id=Rv1495;logic_name=ena Chromosome ena mRNA 1686570 1686887 . + . ID=transcript:Rv1495;Parent=gene:Rv1495;Name=mazF4-1;biotype=protein_coding;transcript_id=Rv1495 Chromosome ena exon 1686570 1686887 . + . Parent=transcript:Rv1495;Name=Rv1495-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1495-1;rank=1 Chromosome ena CDS 1686570 1686887 . + 0 ID=CDS:Rv1495;Parent=transcript:Rv1495;protein_id=Rv1495 ### -Chromosome ena gene 1686884 1687888 . + . ID=gene:Rv1496;biotype=protein_coding;description=Possible transport system kinase;gene_id=Rv1496;logic_name=ena +Chromosome ena gene 1686884 1687888 . + . ID=gene:Rv1496;biotype=protein_coding;description=Possible transport system kinase;gene_id=Rv1496;logic_name=ena Chromosome ena mRNA 1686884 1687888 . + . ID=transcript:Rv1496;Parent=gene:Rv1496;biotype=protein_coding;transcript_id=Rv1496 Chromosome ena exon 1686884 1687888 . + . Parent=transcript:Rv1496;Name=Rv1496-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1496-1;rank=1 Chromosome ena CDS 1686884 1687888 . + 0 ID=CDS:Rv1496;Parent=transcript:Rv1496;protein_id=Rv1496 ### -Chromosome ena gene 1687941 1689230 . + . ID=gene:Rv1497;Name=lipL;biotype=protein_coding;description=Probable esterase LipL;gene_id=Rv1497;logic_name=ena +Chromosome ena gene 1687941 1689230 . + . ID=gene:Rv1497;Name=lipL;biotype=protein_coding;description=Probable esterase LipL;gene_id=Rv1497;logic_name=ena Chromosome ena mRNA 1687941 1689230 . + . ID=transcript:Rv1497;Parent=gene:Rv1497;Name=lipL-1;biotype=protein_coding;transcript_id=Rv1497 Chromosome ena exon 1687941 1689230 . + . Parent=transcript:Rv1497;Name=Rv1497-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1497-1;rank=1 Chromosome ena CDS 1687941 1689230 . + 0 ID=CDS:Rv1497;Parent=transcript:Rv1497;protein_id=Rv1497 ### -Chromosome ena gene 1689303 1689920 . - . ID=gene:Rv1498c;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1498c;logic_name=ena +Chromosome ena gene 1689303 1689920 . - . ID=gene:Rv1498c;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1498c;logic_name=ena Chromosome ena mRNA 1689303 1689920 . - . ID=transcript:Rv1498c;Parent=gene:Rv1498c;biotype=protein_coding;transcript_id=Rv1498c Chromosome ena exon 1689303 1689920 . - . Parent=transcript:Rv1498c;Name=Rv1498c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1498c-1;rank=1 Chromosome ena CDS 1689303 1689920 . - 0 ID=CDS:Rv1498c;Parent=transcript:Rv1498c;protein_id=Rv1498c ### -Chromosome ena gene 1690134 1690346 . - . ID=gene:Rv1498A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1498A;logic_name=ena +Chromosome ena gene 1690134 1690346 . - . ID=gene:Rv1498A;biotype=protein_coding;description=Conserved protein;gene_id=Rv1498A;logic_name=ena Chromosome ena mRNA 1690134 1690346 . - . ID=transcript:Rv1498A;Parent=gene:Rv1498A;biotype=protein_coding;transcript_id=Rv1498A Chromosome ena exon 1690134 1690346 . - . Parent=transcript:Rv1498A;Name=Rv1498A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1498A-1;rank=1 Chromosome ena CDS 1690134 1690346 . - 0 ID=CDS:Rv1498A;Parent=transcript:Rv1498A;protein_id=Rv1498A ### -Chromosome ena gene 1690407 1690805 . + . ID=gene:Rv1499;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1499;logic_name=ena +Chromosome ena gene 1690407 1690805 . + . ID=gene:Rv1499;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1499;logic_name=ena Chromosome ena mRNA 1690407 1690805 . + . ID=transcript:Rv1499;Parent=gene:Rv1499;biotype=protein_coding;transcript_id=Rv1499 Chromosome ena exon 1690407 1690805 . + . Parent=transcript:Rv1499;Name=Rv1499-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1499-1;rank=1 Chromosome ena CDS 1690407 1690805 . + 0 ID=CDS:Rv1499;Parent=transcript:Rv1499;protein_id=Rv1499 ### -Chromosome ena gene 1690850 1691878 . + . ID=gene:Rv1500;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1500;logic_name=ena +Chromosome ena gene 1690850 1691878 . + . ID=gene:Rv1500;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1500;logic_name=ena Chromosome ena mRNA 1690850 1691878 . + . ID=transcript:Rv1500;Parent=gene:Rv1500;biotype=protein_coding;transcript_id=Rv1500 Chromosome ena exon 1690850 1691878 . + . Parent=transcript:Rv1500;Name=Rv1500-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1500-1;rank=1 Chromosome ena CDS 1690850 1691878 . + 0 ID=CDS:Rv1500;Parent=transcript:Rv1500;protein_id=Rv1500 ### -Chromosome ena gene 1691890 1692711 . + . ID=gene:Rv1501;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1501;logic_name=ena +Chromosome ena gene 1691890 1692711 . + . ID=gene:Rv1501;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1501;logic_name=ena Chromosome ena mRNA 1691890 1692711 . + . ID=transcript:Rv1501;Parent=gene:Rv1501;biotype=protein_coding;transcript_id=Rv1501 Chromosome ena exon 1691890 1692711 . + . Parent=transcript:Rv1501;Name=Rv1501-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1501-1;rank=1 Chromosome ena CDS 1691890 1692711 . + 0 ID=CDS:Rv1501;Parent=transcript:Rv1501;protein_id=Rv1501 ### -Chromosome ena gene 1692924 1693823 . + . ID=gene:Rv1502;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1502;logic_name=ena +Chromosome ena gene 1692924 1693823 . + . ID=gene:Rv1502;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1502;logic_name=ena Chromosome ena mRNA 1692924 1693823 . + . ID=transcript:Rv1502;Parent=gene:Rv1502;biotype=protein_coding;transcript_id=Rv1502 Chromosome ena exon 1692924 1693823 . + . Parent=transcript:Rv1502;Name=Rv1502-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1502-1;rank=1 Chromosome ena CDS 1692924 1693823 . + 0 ID=CDS:Rv1502;Parent=transcript:Rv1502;protein_id=Rv1502 ### -Chromosome ena gene 1693996 1694544 . - . ID=gene:Rv1503c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1503c;logic_name=ena +Chromosome ena gene 1693996 1694544 . - . ID=gene:Rv1503c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1503c;logic_name=ena Chromosome ena mRNA 1693996 1694544 . - . ID=transcript:Rv1503c;Parent=gene:Rv1503c;biotype=protein_coding;transcript_id=Rv1503c Chromosome ena exon 1693996 1694544 . - . Parent=transcript:Rv1503c;Name=Rv1503c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1503c-1;rank=1 Chromosome ena CDS 1693996 1694544 . - 0 ID=CDS:Rv1503c;Parent=transcript:Rv1503c;protein_id=Rv1503c ### -Chromosome ena gene 1694545 1695144 . - . ID=gene:Rv1504c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1504c;logic_name=ena +Chromosome ena gene 1694545 1695144 . - . ID=gene:Rv1504c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1504c;logic_name=ena Chromosome ena mRNA 1694545 1695144 . - . ID=transcript:Rv1504c;Parent=gene:Rv1504c;biotype=protein_coding;transcript_id=Rv1504c Chromosome ena exon 1694545 1695144 . - . Parent=transcript:Rv1504c;Name=Rv1504c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1504c-1;rank=1 Chromosome ena CDS 1694545 1695144 . - 0 ID=CDS:Rv1504c;Parent=transcript:Rv1504c;protein_id=Rv1504c ### -Chromosome ena gene 1695281 1695946 . - . ID=gene:Rv1505c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1505c;logic_name=ena +Chromosome ena gene 1695281 1695946 . - . ID=gene:Rv1505c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1505c;logic_name=ena Chromosome ena mRNA 1695281 1695946 . - . ID=transcript:Rv1505c;Parent=gene:Rv1505c;biotype=protein_coding;transcript_id=Rv1505c Chromosome ena exon 1695281 1695946 . - . Parent=transcript:Rv1505c;Name=Rv1505c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1505c-1;rank=1 Chromosome ena CDS 1695281 1695946 . - 0 ID=CDS:Rv1505c;Parent=transcript:Rv1505c;protein_id=Rv1505c ### -Chromosome ena gene 1695943 1696443 . - . ID=gene:Rv1506c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1506c;logic_name=ena +Chromosome ena gene 1695943 1696443 . - . ID=gene:Rv1506c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1506c;logic_name=ena Chromosome ena mRNA 1695943 1696443 . - . ID=transcript:Rv1506c;Parent=gene:Rv1506c;biotype=protein_coding;transcript_id=Rv1506c Chromosome ena exon 1695943 1696443 . - . Parent=transcript:Rv1506c;Name=Rv1506c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1506c-1;rank=1 Chromosome ena CDS 1695943 1696443 . - 0 ID=CDS:Rv1506c;Parent=transcript:Rv1506c;protein_id=Rv1506c ### -Chromosome ena gene 1696727 1697422 . - . ID=gene:Rv1507c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1507c;logic_name=ena +Chromosome ena gene 1696727 1697422 . - . ID=gene:Rv1507c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1507c;logic_name=ena Chromosome ena mRNA 1696727 1697422 . - . ID=transcript:Rv1507c;Parent=gene:Rv1507c;biotype=protein_coding;transcript_id=Rv1507c Chromosome ena exon 1696727 1697422 . - . Parent=transcript:Rv1507c;Name=Rv1507c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1507c-1;rank=1 Chromosome ena CDS 1696727 1697422 . - 0 ID=CDS:Rv1507c;Parent=transcript:Rv1507c;protein_id=Rv1507c ### -Chromosome ena gene 1697356 1697859 . + . ID=gene:Rv1507A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1507A;logic_name=ena +Chromosome ena gene 1697356 1697859 . + . ID=gene:Rv1507A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1507A;logic_name=ena Chromosome ena mRNA 1697356 1697859 . + . ID=transcript:Rv1507A;Parent=gene:Rv1507A;biotype=protein_coding;transcript_id=Rv1507A Chromosome ena exon 1697356 1697859 . + . Parent=transcript:Rv1507A;Name=Rv1507A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1507A-1;rank=1 Chromosome ena CDS 1697356 1697859 . + 0 ID=CDS:Rv1507A;Parent=transcript:Rv1507A;protein_id=Rv1507A ### -Chromosome ena gene 1698095 1699894 . - . ID=gene:Rv1508c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1508c;logic_name=ena +Chromosome ena gene 1698095 1699894 . - . ID=gene:Rv1508c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1508c;logic_name=ena Chromosome ena mRNA 1698095 1699894 . - . ID=transcript:Rv1508c;Parent=gene:Rv1508c;biotype=protein_coding;transcript_id=Rv1508c Chromosome ena exon 1698095 1699894 . - . Parent=transcript:Rv1508c;Name=Rv1508c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1508c-1;rank=1 Chromosome ena CDS 1698095 1699894 . - 0 ID=CDS:Rv1508c;Parent=transcript:Rv1508c;protein_id=Rv1508c ### -Chromosome ena gene 1699866 1700228 . + . ID=gene:Rv1508A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1508A;logic_name=ena +Chromosome ena gene 1699866 1700228 . + . ID=gene:Rv1508A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1508A;logic_name=ena Chromosome ena mRNA 1699866 1700228 . + . ID=transcript:Rv1508A;Parent=gene:Rv1508A;biotype=protein_coding;transcript_id=Rv1508A Chromosome ena exon 1699866 1700228 . + . Parent=transcript:Rv1508A;Name=Rv1508A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1508A-1;rank=1 Chromosome ena CDS 1699866 1700228 . + 0 ID=CDS:Rv1508A;Parent=transcript:Rv1508A;protein_id=Rv1508A ### -Chromosome ena gene 1700212 1701093 . + . ID=gene:Rv1509;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1509;logic_name=ena +Chromosome ena gene 1700212 1701093 . + . ID=gene:Rv1509;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1509;logic_name=ena Chromosome ena mRNA 1700212 1701093 . + . ID=transcript:Rv1509;Parent=gene:Rv1509;biotype=protein_coding;transcript_id=Rv1509 Chromosome ena exon 1700212 1701093 . + . Parent=transcript:Rv1509;Name=Rv1509-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1509-1;rank=1 Chromosome ena CDS 1700212 1701093 . + 0 ID=CDS:Rv1509;Parent=transcript:Rv1509;protein_id=Rv1509 ### -Chromosome ena gene 1701295 1702593 . + . ID=gene:Rv1510;biotype=protein_coding;description=Conserved probable membrane protein;gene_id=Rv1510;logic_name=ena +Chromosome ena gene 1701295 1702593 . + . ID=gene:Rv1510;biotype=protein_coding;description=Conserved probable membrane protein;gene_id=Rv1510;logic_name=ena Chromosome ena mRNA 1701295 1702593 . + . ID=transcript:Rv1510;Parent=gene:Rv1510;biotype=protein_coding;transcript_id=Rv1510 Chromosome ena exon 1701295 1702593 . + . Parent=transcript:Rv1510;Name=Rv1510-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1510-1;rank=1 Chromosome ena CDS 1701295 1702593 . + 0 ID=CDS:Rv1510;Parent=transcript:Rv1510;protein_id=Rv1510 ### -Chromosome ena gene 1703074 1704096 . + . ID=gene:Rv1511;Name=gmdA;biotype=protein_coding;description=GDP-D-mannose dehydratase GmdA (GDP-mannose 4%2C6 dehydratase) (GMD);gene_id=Rv1511;logic_name=ena +Chromosome ena gene 1703074 1704096 . + . ID=gene:Rv1511;Name=gmdA;biotype=protein_coding;description=GDP-D-mannose dehydratase GmdA (GDP-mannose 4%2C6 dehydratase) (GMD);gene_id=Rv1511;logic_name=ena Chromosome ena mRNA 1703074 1704096 . + . ID=transcript:Rv1511;Parent=gene:Rv1511;Name=gmdA-1;biotype=protein_coding;transcript_id=Rv1511 Chromosome ena exon 1703074 1704096 . + . Parent=transcript:Rv1511;Name=Rv1511-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1511-1;rank=1 Chromosome ena CDS 1703074 1704096 . + 0 ID=CDS:Rv1511;Parent=transcript:Rv1511;protein_id=Rv1511 ### -Chromosome ena gene 1704093 1705061 . + . ID=gene:Rv1512;Name=epiA;biotype=protein_coding;description=Probable nucleotide-sugar epimerase EpiA;gene_id=Rv1512;logic_name=ena +Chromosome ena gene 1704093 1705061 . + . ID=gene:Rv1512;Name=epiA;biotype=protein_coding;description=Probable nucleotide-sugar epimerase EpiA;gene_id=Rv1512;logic_name=ena Chromosome ena mRNA 1704093 1705061 . + . ID=transcript:Rv1512;Parent=gene:Rv1512;Name=epiA-1;biotype=protein_coding;transcript_id=Rv1512 Chromosome ena exon 1704093 1705061 . + . Parent=transcript:Rv1512;Name=Rv1512-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1512-1;rank=1 Chromosome ena CDS 1704093 1705061 . + 0 ID=CDS:Rv1512;Parent=transcript:Rv1512;protein_id=Rv1512 ### -Chromosome ena gene 1705058 1705789 . + . ID=gene:Rv1513;biotype=protein_coding;description=Conserved protein;gene_id=Rv1513;logic_name=ena +Chromosome ena gene 1705058 1705789 . + . ID=gene:Rv1513;biotype=protein_coding;description=Conserved protein;gene_id=Rv1513;logic_name=ena Chromosome ena mRNA 1705058 1705789 . + . ID=transcript:Rv1513;Parent=gene:Rv1513;biotype=protein_coding;transcript_id=Rv1513 Chromosome ena exon 1705058 1705789 . + . Parent=transcript:Rv1513;Name=Rv1513-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1513-1;rank=1 Chromosome ena CDS 1705058 1705789 . + 0 ID=CDS:Rv1513;Parent=transcript:Rv1513;protein_id=Rv1513 ### -Chromosome ena gene 1705807 1706595 . - . ID=gene:Rv1514c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1514c;logic_name=ena +Chromosome ena gene 1705807 1706595 . - . ID=gene:Rv1514c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1514c;logic_name=ena Chromosome ena mRNA 1705807 1706595 . - . ID=transcript:Rv1514c;Parent=gene:Rv1514c;biotype=protein_coding;transcript_id=Rv1514c Chromosome ena exon 1705807 1706595 . - . Parent=transcript:Rv1514c;Name=Rv1514c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1514c-1;rank=1 Chromosome ena CDS 1705807 1706595 . - 0 ID=CDS:Rv1514c;Parent=transcript:Rv1514c;protein_id=Rv1514c ### -Chromosome ena gene 1706630 1707526 . - . ID=gene:Rv1515c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1515c;logic_name=ena +Chromosome ena gene 1706630 1707526 . - . ID=gene:Rv1515c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1515c;logic_name=ena Chromosome ena mRNA 1706630 1707526 . - . ID=transcript:Rv1515c;Parent=gene:Rv1515c;biotype=protein_coding;transcript_id=Rv1515c Chromosome ena exon 1706630 1707526 . - . Parent=transcript:Rv1515c;Name=Rv1515c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1515c-1;rank=1 Chromosome ena CDS 1706630 1707526 . - 0 ID=CDS:Rv1515c;Parent=transcript:Rv1515c;protein_id=Rv1515c ### -Chromosome ena gene 1707529 1708539 . - . ID=gene:Rv1516c;biotype=protein_coding;description=Probable sugar transferase;gene_id=Rv1516c;logic_name=ena +Chromosome ena gene 1707529 1708539 . - . ID=gene:Rv1516c;biotype=protein_coding;description=Probable sugar transferase;gene_id=Rv1516c;logic_name=ena Chromosome ena mRNA 1707529 1708539 . - . ID=transcript:Rv1516c;Parent=gene:Rv1516c;biotype=protein_coding;transcript_id=Rv1516c Chromosome ena exon 1707529 1708539 . - . Parent=transcript:Rv1516c;Name=Rv1516c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1516c-1;rank=1 Chromosome ena CDS 1707529 1708539 . - 0 ID=CDS:Rv1516c;Parent=transcript:Rv1516c;protein_id=Rv1516c ### -Chromosome ena gene 1708871 1709635 . + . ID=gene:Rv1517;biotype=protein_coding;description=Conserved hypothetical transmembrane protein;gene_id=Rv1517;logic_name=ena +Chromosome ena gene 1708871 1709635 . + . ID=gene:Rv1517;biotype=protein_coding;description=Conserved hypothetical transmembrane protein;gene_id=Rv1517;logic_name=ena Chromosome ena mRNA 1708871 1709635 . + . ID=transcript:Rv1517;Parent=gene:Rv1517;biotype=protein_coding;transcript_id=Rv1517 Chromosome ena exon 1708871 1709635 . + . Parent=transcript:Rv1517;Name=Rv1517-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1517-1;rank=1 Chromosome ena CDS 1708871 1709635 . + 0 ID=CDS:Rv1517;Parent=transcript:Rv1517;protein_id=Rv1517 ### -Chromosome ena gene 1709644 1710603 . + . ID=gene:Rv1518;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1518;logic_name=ena +Chromosome ena gene 1709644 1710603 . + . ID=gene:Rv1518;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1518;logic_name=ena Chromosome ena mRNA 1709644 1710603 . + . ID=transcript:Rv1518;Parent=gene:Rv1518;biotype=protein_coding;transcript_id=Rv1518 Chromosome ena exon 1709644 1710603 . + . Parent=transcript:Rv1518;Name=Rv1518-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1518-1;rank=1 Chromosome ena CDS 1709644 1710603 . + 0 ID=CDS:Rv1518;Parent=transcript:Rv1518;protein_id=Rv1518 ### -Chromosome ena gene 1710733 1711002 . + . ID=gene:Rv1519;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1519;logic_name=ena +Chromosome ena gene 1710733 1711002 . + . ID=gene:Rv1519;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1519;logic_name=ena Chromosome ena mRNA 1710733 1711002 . + . ID=transcript:Rv1519;Parent=gene:Rv1519;biotype=protein_coding;transcript_id=Rv1519 Chromosome ena exon 1710733 1711002 . + . Parent=transcript:Rv1519;Name=Rv1519-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1519-1;rank=1 Chromosome ena CDS 1710733 1711002 . + 0 ID=CDS:Rv1519;Parent=transcript:Rv1519;protein_id=Rv1519 ### -Chromosome ena gene 1711028 1712068 . + . ID=gene:Rv1520;biotype=protein_coding;description=Probable sugar transferase;gene_id=Rv1520;logic_name=ena +Chromosome ena gene 1711028 1712068 . + . ID=gene:Rv1520;biotype=protein_coding;description=Probable sugar transferase;gene_id=Rv1520;logic_name=ena Chromosome ena mRNA 1711028 1712068 . + . ID=transcript:Rv1520;Parent=gene:Rv1520;biotype=protein_coding;transcript_id=Rv1520 Chromosome ena exon 1711028 1712068 . + . Parent=transcript:Rv1520;Name=Rv1520-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1520-1;rank=1 Chromosome ena CDS 1711028 1712068 . + 0 ID=CDS:Rv1520;Parent=transcript:Rv1520;protein_id=Rv1520 ### -Chromosome ena gene 1712302 1714053 . + . ID=gene:Rv1521;Name=fadD25;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD25 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1521;logic_name=ena +Chromosome ena gene 1712302 1714053 . + . ID=gene:Rv1521;Name=fadD25;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD25 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1521;logic_name=ena Chromosome ena mRNA 1712302 1714053 . + . ID=transcript:Rv1521;Parent=gene:Rv1521;Name=fadD25-1;biotype=protein_coding;transcript_id=Rv1521 Chromosome ena exon 1712302 1714053 . + . Parent=transcript:Rv1521;Name=Rv1521-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1521-1;rank=1 Chromosome ena CDS 1712302 1714053 . + 0 ID=CDS:Rv1521;Parent=transcript:Rv1521;protein_id=Rv1521 ### -Chromosome ena gene 1714172 1717612 . - . ID=gene:Rv1522c;Name=mmpL12;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL12;gene_id=Rv1522c;logic_name=ena +Chromosome ena gene 1714172 1717612 . - . ID=gene:Rv1522c;Name=mmpL12;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL12;gene_id=Rv1522c;logic_name=ena Chromosome ena mRNA 1714172 1717612 . - . ID=transcript:Rv1522c;Parent=gene:Rv1522c;Name=mmpL12-1;biotype=protein_coding;transcript_id=Rv1522c Chromosome ena exon 1714172 1717612 . - . Parent=transcript:Rv1522c;Name=Rv1522c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1522c-1;rank=1 Chromosome ena CDS 1714172 1717612 . - 0 ID=CDS:Rv1522c;Parent=transcript:Rv1522c;protein_id=Rv1522c ### -Chromosome ena gene 1717653 1718696 . + . ID=gene:Rv1523;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1523;logic_name=ena +Chromosome ena gene 1717653 1718696 . + . ID=gene:Rv1523;biotype=protein_coding;description=Probable methyltransferase;gene_id=Rv1523;logic_name=ena Chromosome ena mRNA 1717653 1718696 . + . ID=transcript:Rv1523;Parent=gene:Rv1523;biotype=protein_coding;transcript_id=Rv1523 Chromosome ena exon 1717653 1718696 . + . Parent=transcript:Rv1523;Name=Rv1523-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1523-1;rank=1 Chromosome ena CDS 1717653 1718696 . + 0 ID=CDS:Rv1523;Parent=transcript:Rv1523;protein_id=Rv1523 ### -Chromosome ena gene 1718726 1719970 . + . ID=gene:Rv1524;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1524;logic_name=ena +Chromosome ena gene 1718726 1719970 . + . ID=gene:Rv1524;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1524;logic_name=ena Chromosome ena mRNA 1718726 1719970 . + . ID=transcript:Rv1524;Parent=gene:Rv1524;biotype=protein_coding;transcript_id=Rv1524 Chromosome ena exon 1718726 1719970 . + . Parent=transcript:Rv1524;Name=Rv1524-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1524-1;rank=1 Chromosome ena CDS 1718726 1719970 . + 0 ID=CDS:Rv1524;Parent=transcript:Rv1524;protein_id=Rv1524 ### -Chromosome ena gene 1720017 1720802 . + . ID=gene:Rv1525;Name=wbbL2;biotype=protein_coding;description=Possible rhamnosyl transferase WbbL2;gene_id=Rv1525;logic_name=ena +Chromosome ena gene 1720017 1720802 . + . ID=gene:Rv1525;Name=wbbL2;biotype=protein_coding;description=Possible rhamnosyl transferase WbbL2;gene_id=Rv1525;logic_name=ena Chromosome ena mRNA 1720017 1720802 . + . ID=transcript:Rv1525;Parent=gene:Rv1525;Name=wbbL2-1;biotype=protein_coding;transcript_id=Rv1525 Chromosome ena exon 1720017 1720802 . + . Parent=transcript:Rv1525;Name=Rv1525-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1525-1;rank=1 Chromosome ena CDS 1720017 1720802 . + 0 ID=CDS:Rv1525;Parent=transcript:Rv1525;protein_id=Rv1525 ### -Chromosome ena gene 1720780 1722060 . - . ID=gene:Rv1526c;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1526c;logic_name=ena +Chromosome ena gene 1720780 1722060 . - . ID=gene:Rv1526c;biotype=protein_coding;description=Probable glycosyltransferase;gene_id=Rv1526c;logic_name=ena Chromosome ena mRNA 1720780 1722060 . - . ID=transcript:Rv1526c;Parent=gene:Rv1526c;biotype=protein_coding;transcript_id=Rv1526c Chromosome ena exon 1720780 1722060 . - . Parent=transcript:Rv1526c;Name=Rv1526c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1526c-1;rank=1 Chromosome ena CDS 1720780 1722060 . - 0 ID=CDS:Rv1526c;Parent=transcript:Rv1526c;protein_id=Rv1526c ### -Chromosome ena gene 1722083 1728409 . - . ID=gene:Rv1527c;Name=pks5;biotype=protein_coding;description=Probable polyketide synthase Pks5;gene_id=Rv1527c;logic_name=ena +Chromosome ena gene 1722083 1728409 . - . ID=gene:Rv1527c;Name=pks5;biotype=protein_coding;description=Probable polyketide synthase Pks5;gene_id=Rv1527c;logic_name=ena Chromosome ena mRNA 1722083 1728409 . - . ID=transcript:Rv1527c;Parent=gene:Rv1527c;Name=pks5-1;biotype=protein_coding;transcript_id=Rv1527c Chromosome ena exon 1722083 1728409 . - . Parent=transcript:Rv1527c;Name=Rv1527c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1527c-1;rank=1 Chromosome ena CDS 1722083 1728409 . - 0 ID=CDS:Rv1527c;Parent=transcript:Rv1527c;protein_id=Rv1527c ### -Chromosome ena gene 1728953 1729450 . - . ID=gene:Rv1528c;Name=papA4;biotype=protein_coding;description=Probable conserved polyketide synthase associated protein PapA4;gene_id=Rv1528c;logic_name=ena +Chromosome ena gene 1728953 1729450 . - . ID=gene:Rv1528c;Name=papA4;biotype=protein_coding;description=Probable conserved polyketide synthase associated protein PapA4;gene_id=Rv1528c;logic_name=ena Chromosome ena mRNA 1728953 1729450 . - . ID=transcript:Rv1528c;Parent=gene:Rv1528c;Name=papA4-1;biotype=protein_coding;transcript_id=Rv1528c Chromosome ena exon 1728953 1729450 . - . Parent=transcript:Rv1528c;Name=Rv1528c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1528c-1;rank=1 Chromosome ena CDS 1728953 1729450 . - 0 ID=CDS:Rv1528c;Parent=transcript:Rv1528c;protein_id=Rv1528c ### -Chromosome ena gene 1729502 1731256 . + . ID=gene:Rv1529;Name=fadD24;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD24 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1529;logic_name=ena +Chromosome ena gene 1729502 1731256 . + . ID=gene:Rv1529;Name=fadD24;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD24 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv1529;logic_name=ena Chromosome ena mRNA 1729502 1731256 . + . ID=transcript:Rv1529;Parent=gene:Rv1529;Name=fadD24-1;biotype=protein_coding;transcript_id=Rv1529 Chromosome ena exon 1729502 1731256 . + . Parent=transcript:Rv1529;Name=Rv1529-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1529-1;rank=1 Chromosome ena CDS 1729502 1731256 . + 0 ID=CDS:Rv1529;Parent=transcript:Rv1529;protein_id=Rv1529 ### -Chromosome ena gene 1731373 1732476 . + . ID=gene:Rv1530;Name=adh;biotype=protein_coding;description=Probable alcohol dehydrogenase Adh;gene_id=Rv1530;logic_name=ena +Chromosome ena gene 1731373 1732476 . + . ID=gene:Rv1530;Name=adh;biotype=protein_coding;description=Probable alcohol dehydrogenase Adh;gene_id=Rv1530;logic_name=ena Chromosome ena mRNA 1731373 1732476 . + . ID=transcript:Rv1530;Parent=gene:Rv1530;Name=adh-1;biotype=protein_coding;transcript_id=Rv1530 Chromosome ena exon 1731373 1732476 . + . Parent=transcript:Rv1530;Name=Rv1530-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1530-1;rank=1 Chromosome ena CDS 1731373 1732476 . + 0 ID=CDS:Rv1530;Parent=transcript:Rv1530;protein_id=Rv1530 ### -Chromosome ena gene 1732473 1733039 . + . ID=gene:Rv1531;biotype=protein_coding;description=Conserved protein;gene_id=Rv1531;logic_name=ena +Chromosome ena gene 1732473 1733039 . + . ID=gene:Rv1531;biotype=protein_coding;description=Conserved protein;gene_id=Rv1531;logic_name=ena Chromosome ena mRNA 1732473 1733039 . + . ID=transcript:Rv1531;Parent=gene:Rv1531;biotype=protein_coding;transcript_id=Rv1531 Chromosome ena exon 1732473 1733039 . + . Parent=transcript:Rv1531;Name=Rv1531-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1531-1;rank=1 Chromosome ena CDS 1732473 1733039 . + 0 ID=CDS:Rv1531;Parent=transcript:Rv1531;protein_id=Rv1531 ### -Chromosome ena gene 1733116 1733550 . - . ID=gene:Rv1532c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1532c;logic_name=ena +Chromosome ena gene 1733116 1733550 . - . ID=gene:Rv1532c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1532c;logic_name=ena Chromosome ena mRNA 1733116 1733550 . - . ID=transcript:Rv1532c;Parent=gene:Rv1532c;biotype=protein_coding;transcript_id=Rv1532c Chromosome ena exon 1733116 1733550 . - . Parent=transcript:Rv1532c;Name=Rv1532c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1532c-1;rank=1 Chromosome ena CDS 1733116 1733550 . - 0 ID=CDS:Rv1532c;Parent=transcript:Rv1532c;protein_id=Rv1532c ### -Chromosome ena gene 1733610 1734737 . + . ID=gene:Rv1533;biotype=protein_coding;description=Conserved protein;gene_id=Rv1533;logic_name=ena +Chromosome ena gene 1733610 1734737 . + . ID=gene:Rv1533;biotype=protein_coding;description=Conserved protein;gene_id=Rv1533;logic_name=ena Chromosome ena mRNA 1733610 1734737 . + . ID=transcript:Rv1533;Parent=gene:Rv1533;biotype=protein_coding;transcript_id=Rv1533 Chromosome ena exon 1733610 1734737 . + . Parent=transcript:Rv1533;Name=Rv1533-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1533-1;rank=1 Chromosome ena CDS 1733610 1734737 . + 0 ID=CDS:Rv1533;Parent=transcript:Rv1533;protein_id=Rv1533 ### -Chromosome ena gene 1734734 1735411 . + . ID=gene:Rv1534;biotype=protein_coding;description=Probable transcriptional regulator;gene_id=Rv1534;logic_name=ena +Chromosome ena gene 1734734 1735411 . + . ID=gene:Rv1534;biotype=protein_coding;description=Probable transcriptional regulator;gene_id=Rv1534;logic_name=ena Chromosome ena mRNA 1734734 1735411 . + . ID=transcript:Rv1534;Parent=gene:Rv1534;biotype=protein_coding;transcript_id=Rv1534 Chromosome ena exon 1734734 1735411 . + . Parent=transcript:Rv1534;Name=Rv1534-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1534-1;rank=1 Chromosome ena CDS 1734734 1735411 . + 0 ID=CDS:Rv1534;Parent=transcript:Rv1534;protein_id=Rv1534 ### -Chromosome ena gene 1735976 1736212 . + . ID=gene:Rv1535;biotype=protein_coding;description=Unknown protein;gene_id=Rv1535;logic_name=ena +Chromosome ena gene 1735976 1736212 . + . ID=gene:Rv1535;biotype=protein_coding;description=Unknown protein;gene_id=Rv1535;logic_name=ena Chromosome ena mRNA 1735976 1736212 . + . ID=transcript:Rv1535;Parent=gene:Rv1535;biotype=protein_coding;transcript_id=Rv1535 Chromosome ena exon 1735976 1736212 . + . Parent=transcript:Rv1535;Name=Rv1535-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1535-1;rank=1 Chromosome ena CDS 1735976 1736212 . + 0 ID=CDS:Rv1535;Parent=transcript:Rv1535;protein_id=Rv1535 ### -Chromosome ena gene 1736519 1739644 . + . ID=gene:Rv1536;Name=ileS;biotype=protein_coding;description=Isoleucyl-tRNA synthetase IleS;gene_id=Rv1536;logic_name=ena +Chromosome ena gene 1736519 1739644 . + . ID=gene:Rv1536;Name=ileS;biotype=protein_coding;description=Isoleucyl-tRNA synthetase IleS;gene_id=Rv1536;logic_name=ena Chromosome ena mRNA 1736519 1739644 . + . ID=transcript:Rv1536;Parent=gene:Rv1536;Name=ileS-1;biotype=protein_coding;transcript_id=Rv1536 Chromosome ena exon 1736519 1739644 . + . Parent=transcript:Rv1536;Name=Rv1536-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1536-1;rank=1 Chromosome ena CDS 1736519 1739644 . + 0 ID=CDS:Rv1536;Parent=transcript:Rv1536;protein_id=Rv1536 ### -Chromosome ena gene 1739856 1741247 . + . ID=gene:Rv1537;Name=dinX;biotype=protein_coding;description=Probable DNA polymerase IV DinX (pol IV 1) (DNA nucleotidyltransferase (DNA-directed));gene_id=Rv1537;logic_name=ena +Chromosome ena gene 1739856 1741247 . + . ID=gene:Rv1537;Name=dinX;biotype=protein_coding;description=Probable DNA polymerase IV DinX (pol IV 1) (DNA nucleotidyltransferase (DNA-directed));gene_id=Rv1537;logic_name=ena Chromosome ena mRNA 1739856 1741247 . + . ID=transcript:Rv1537;Parent=gene:Rv1537;Name=dinX-1;biotype=protein_coding;transcript_id=Rv1537 Chromosome ena exon 1739856 1741247 . + . Parent=transcript:Rv1537;Name=Rv1537-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1537-1;rank=1 Chromosome ena CDS 1739856 1741247 . + 0 ID=CDS:Rv1537;Parent=transcript:Rv1537;protein_id=Rv1537 ### -Chromosome ena gene 1741212 1742192 . - . ID=gene:Rv1538c;Name=ansA;biotype=protein_coding;description=Probable L-aparaginase AnsA;gene_id=Rv1538c;logic_name=ena +Chromosome ena gene 1741212 1742192 . - . ID=gene:Rv1538c;Name=ansA;biotype=protein_coding;description=Probable L-aparaginase AnsA;gene_id=Rv1538c;logic_name=ena Chromosome ena mRNA 1741212 1742192 . - . ID=transcript:Rv1538c;Parent=gene:Rv1538c;Name=ansA-1;biotype=protein_coding;transcript_id=Rv1538c Chromosome ena exon 1741212 1742192 . - . Parent=transcript:Rv1538c;Name=Rv1538c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1538c-1;rank=1 Chromosome ena CDS 1741212 1742192 . - 0 ID=CDS:Rv1538c;Parent=transcript:Rv1538c;protein_id=Rv1538c ### -Chromosome ena gene 1742244 1742852 . + . ID=gene:Rv1539;Name=lspA;biotype=protein_coding;description=Probable lipoprotein signal peptidase LspA;gene_id=Rv1539;logic_name=ena +Chromosome ena gene 1742244 1742852 . + . ID=gene:Rv1539;Name=lspA;biotype=protein_coding;description=Probable lipoprotein signal peptidase LspA;gene_id=Rv1539;logic_name=ena Chromosome ena mRNA 1742244 1742852 . + . ID=transcript:Rv1539;Parent=gene:Rv1539;Name=lspA-1;biotype=protein_coding;transcript_id=Rv1539 Chromosome ena exon 1742244 1742852 . + . Parent=transcript:Rv1539;Name=Rv1539-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1539-1;rank=1 Chromosome ena CDS 1742244 1742852 . + 0 ID=CDS:Rv1539;Parent=transcript:Rv1539;protein_id=Rv1539 ### -Chromosome ena gene 1742845 1743771 . + . ID=gene:Rv1540;biotype=protein_coding;description=Conserved hypothetical protein member of yabO/yceC/yfiI family;gene_id=Rv1540;logic_name=ena +Chromosome ena gene 1742845 1743771 . + . ID=gene:Rv1540;biotype=protein_coding;description=Conserved hypothetical protein member of yabO/yceC/yfiI family;gene_id=Rv1540;logic_name=ena Chromosome ena mRNA 1742845 1743771 . + . ID=transcript:Rv1540;Parent=gene:Rv1540;biotype=protein_coding;transcript_id=Rv1540 Chromosome ena exon 1742845 1743771 . + . Parent=transcript:Rv1540;Name=Rv1540-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1540-1;rank=1 Chromosome ena CDS 1742845 1743771 . + 0 ID=CDS:Rv1540;Parent=transcript:Rv1540;protein_id=Rv1540 ### -Chromosome ena gene 1743778 1744371 . - . ID=gene:Rv1541c;Name=lprI;biotype=protein_coding;description=Possible lipoprotein LprI;gene_id=Rv1541c;logic_name=ena +Chromosome ena gene 1743778 1744371 . - . ID=gene:Rv1541c;Name=lprI;biotype=protein_coding;description=Possible lipoprotein LprI;gene_id=Rv1541c;logic_name=ena Chromosome ena mRNA 1743778 1744371 . - . ID=transcript:Rv1541c;Parent=gene:Rv1541c;Name=lprI-1;biotype=protein_coding;transcript_id=Rv1541c Chromosome ena exon 1743778 1744371 . - . Parent=transcript:Rv1541c;Name=Rv1541c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1541c-1;rank=1 Chromosome ena CDS 1743778 1744371 . - 0 ID=CDS:Rv1541c;Parent=transcript:Rv1541c;protein_id=Rv1541c ### -Chromosome ena gene 1744426 1744836 . - . ID=gene:Rv1542c;Name=glbN;biotype=protein_coding;description=Hemoglobin GlbN;gene_id=Rv1542c;logic_name=ena +Chromosome ena gene 1744426 1744836 . - . ID=gene:Rv1542c;Name=glbN;biotype=protein_coding;description=Hemoglobin GlbN;gene_id=Rv1542c;logic_name=ena Chromosome ena mRNA 1744426 1744836 . - . ID=transcript:Rv1542c;Parent=gene:Rv1542c;Name=glbN-1;biotype=protein_coding;transcript_id=Rv1542c Chromosome ena exon 1744426 1744836 . - . Parent=transcript:Rv1542c;Name=Rv1542c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1542c-1;rank=1 Chromosome ena CDS 1744426 1744836 . - 0 ID=CDS:Rv1542c;Parent=transcript:Rv1542c;protein_id=Rv1542c ### -Chromosome ena gene 1745064 1746089 . + . ID=gene:Rv1543;biotype=protein_coding;description=Possible fatty acyl-CoA reductase;gene_id=Rv1543;logic_name=ena +Chromosome ena gene 1745064 1746089 . + . ID=gene:Rv1543;biotype=protein_coding;description=Possible fatty acyl-CoA reductase;gene_id=Rv1543;logic_name=ena Chromosome ena mRNA 1745064 1746089 . + . ID=transcript:Rv1543;Parent=gene:Rv1543;biotype=protein_coding;transcript_id=Rv1543 Chromosome ena exon 1745064 1746089 . + . Parent=transcript:Rv1543;Name=Rv1543-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1543-1;rank=1 Chromosome ena CDS 1745064 1746089 . + 0 ID=CDS:Rv1543;Parent=transcript:Rv1543;protein_id=Rv1543 ### -Chromosome ena gene 1746094 1746897 . + . ID=gene:Rv1544;biotype=protein_coding;description=Possible ketoacyl reductase;gene_id=Rv1544;logic_name=ena +Chromosome ena gene 1746094 1746897 . + . ID=gene:Rv1544;biotype=protein_coding;description=Possible ketoacyl reductase;gene_id=Rv1544;logic_name=ena Chromosome ena mRNA 1746094 1746897 . + . ID=transcript:Rv1544;Parent=gene:Rv1544;biotype=protein_coding;transcript_id=Rv1544 Chromosome ena exon 1746094 1746897 . + . Parent=transcript:Rv1544;Name=Rv1544-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1544-1;rank=1 Chromosome ena CDS 1746094 1746897 . + 0 ID=CDS:Rv1544;Parent=transcript:Rv1544;protein_id=Rv1544 ### -Chromosome ena gene 1746919 1747146 . + . ID=gene:Rv1545;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1545;logic_name=ena +Chromosome ena gene 1746919 1747146 . + . ID=gene:Rv1545;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1545;logic_name=ena Chromosome ena mRNA 1746919 1747146 . + . ID=transcript:Rv1545;Parent=gene:Rv1545;biotype=protein_coding;transcript_id=Rv1545 Chromosome ena exon 1746919 1747146 . + . Parent=transcript:Rv1545;Name=Rv1545-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1545-1;rank=1 Chromosome ena CDS 1746919 1747146 . + 0 ID=CDS:Rv1545;Parent=transcript:Rv1545;protein_id=Rv1545 ### -Chromosome ena gene 1747195 1747626 . + . ID=gene:Rv1546;biotype=protein_coding;description=Conserved protein;gene_id=Rv1546;logic_name=ena +Chromosome ena gene 1747195 1747626 . + . ID=gene:Rv1546;biotype=protein_coding;description=Conserved protein;gene_id=Rv1546;logic_name=ena Chromosome ena mRNA 1747195 1747626 . + . ID=transcript:Rv1546;Parent=gene:Rv1546;biotype=protein_coding;transcript_id=Rv1546 Chromosome ena exon 1747195 1747626 . + . Parent=transcript:Rv1546;Name=Rv1546-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1546-1;rank=1 Chromosome ena CDS 1747195 1747626 . + 0 ID=CDS:Rv1546;Parent=transcript:Rv1546;protein_id=Rv1546 ### -Chromosome ena gene 1747694 1751248 . + . ID=gene:Rv1547;Name=dnaE1;biotype=protein_coding;description=Probable DNA polymerase III (alpha chain) DnaE1 (DNA nucleotidyltransferase);gene_id=Rv1547;logic_name=ena +Chromosome ena gene 1747694 1751248 . + . ID=gene:Rv1547;Name=dnaE1;biotype=protein_coding;description=Probable DNA polymerase III (alpha chain) DnaE1 (DNA nucleotidyltransferase);gene_id=Rv1547;logic_name=ena Chromosome ena mRNA 1747694 1751248 . + . ID=transcript:Rv1547;Parent=gene:Rv1547;Name=dnaE1-1;biotype=protein_coding;transcript_id=Rv1547 Chromosome ena exon 1747694 1751248 . + . Parent=transcript:Rv1547;Name=Rv1547-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1547-1;rank=1 Chromosome ena CDS 1747694 1751248 . + 0 ID=CDS:Rv1547;Parent=transcript:Rv1547;protein_id=Rv1547 ### -Chromosome ena gene 1751297 1753333 . - . ID=gene:Rv1548c;Name=PPE21;biotype=protein_coding;description=PPE family protein PPE21;gene_id=Rv1548c;logic_name=ena +Chromosome ena gene 1751297 1753333 . - . ID=gene:Rv1548c;Name=PPE21;biotype=protein_coding;description=PPE family protein PPE21;gene_id=Rv1548c;logic_name=ena Chromosome ena mRNA 1751297 1753333 . - . ID=transcript:Rv1548c;Parent=gene:Rv1548c;Name=PPE21-1;biotype=protein_coding;transcript_id=Rv1548c Chromosome ena exon 1751297 1753333 . - . Parent=transcript:Rv1548c;Name=Rv1548c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1548c-1;rank=1 Chromosome ena CDS 1751297 1753333 . - 0 ID=CDS:Rv1548c;Parent=transcript:Rv1548c;protein_id=Rv1548c ### -Chromosome ena gene 1753510 1754037 . + . ID=gene:Rv1549;Name=fadD11.1;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD11.1 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1549;logic_name=ena +Chromosome ena gene 1753510 1754037 . + . ID=gene:Rv1549;Name=fadD11.1;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD11.1 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1549;logic_name=ena Chromosome ena mRNA 1753510 1754037 . + . ID=transcript:Rv1549;Parent=gene:Rv1549;Name=fadD11.1-1;biotype=protein_coding;transcript_id=Rv1549 Chromosome ena exon 1753510 1754037 . + . Parent=transcript:Rv1549;Name=Rv1549-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1549-1;rank=1 Chromosome ena CDS 1753510 1754037 . + 0 ID=CDS:Rv1549;Parent=transcript:Rv1549;protein_id=Rv1549 ### -Chromosome ena gene 1753716 1755431 . + . ID=gene:Rv1550;Name=fadD11;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD11 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1550;logic_name=ena +Chromosome ena gene 1753716 1755431 . + . ID=gene:Rv1550;Name=fadD11;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD11 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1550;logic_name=ena Chromosome ena mRNA 1753716 1755431 . + . ID=transcript:Rv1550;Parent=gene:Rv1550;Name=fadD11-1;biotype=protein_coding;transcript_id=Rv1550 Chromosome ena exon 1753716 1755431 . + . Parent=transcript:Rv1550;Name=Rv1550-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1550-1;rank=1 Chromosome ena CDS 1753716 1755431 . + 0 ID=CDS:Rv1550;Parent=transcript:Rv1550;protein_id=Rv1550 ### -Chromosome ena gene 1755445 1757310 . + . ID=gene:Rv1551;Name=plsB1;biotype=protein_coding;description=Possible acyltransferase PlsB1;gene_id=Rv1551;logic_name=ena +Chromosome ena gene 1755445 1757310 . + . ID=gene:Rv1551;Name=plsB1;biotype=protein_coding;description=Possible acyltransferase PlsB1;gene_id=Rv1551;logic_name=ena Chromosome ena mRNA 1755445 1757310 . + . ID=transcript:Rv1551;Parent=gene:Rv1551;Name=plsB1-1;biotype=protein_coding;transcript_id=Rv1551 Chromosome ena exon 1755445 1757310 . + . Parent=transcript:Rv1551;Name=Rv1551-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1551-1;rank=1 Chromosome ena CDS 1755445 1757310 . + 0 ID=CDS:Rv1551;Parent=transcript:Rv1551;protein_id=Rv1551 ### -Chromosome ena gene 1757681 1759432 . + . ID=gene:Rv1552;Name=frdA;biotype=protein_coding;description=Probable fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1552;logic_name=ena +Chromosome ena gene 1757681 1759432 . + . ID=gene:Rv1552;Name=frdA;biotype=protein_coding;description=Probable fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1552;logic_name=ena Chromosome ena mRNA 1757681 1759432 . + . ID=transcript:Rv1552;Parent=gene:Rv1552;Name=frdA-1;biotype=protein_coding;transcript_id=Rv1552 Chromosome ena exon 1757681 1759432 . + . Parent=transcript:Rv1552;Name=Rv1552-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1552-1;rank=1 Chromosome ena CDS 1757681 1759432 . + 0 ID=CDS:Rv1552;Parent=transcript:Rv1552;protein_id=Rv1552 ### -Chromosome ena gene 1759435 1760178 . + . ID=gene:Rv1553;Name=frdB;biotype=protein_coding;description=Probable fumarate reductase [iron-sulfur subunit] FrdB (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1553;logic_name=ena +Chromosome ena gene 1759435 1760178 . + . ID=gene:Rv1553;Name=frdB;biotype=protein_coding;description=Probable fumarate reductase [iron-sulfur subunit] FrdB (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1553;logic_name=ena Chromosome ena mRNA 1759435 1760178 . + . ID=transcript:Rv1553;Parent=gene:Rv1553;Name=frdB-1;biotype=protein_coding;transcript_id=Rv1553 Chromosome ena exon 1759435 1760178 . + . Parent=transcript:Rv1553;Name=Rv1553-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1553-1;rank=1 Chromosome ena CDS 1759435 1760178 . + 0 ID=CDS:Rv1553;Parent=transcript:Rv1553;protein_id=Rv1553 ### -Chromosome ena gene 1760175 1760555 . + . ID=gene:Rv1554;Name=frdC;biotype=protein_coding;description=Probable fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1554;logic_name=ena +Chromosome ena gene 1760175 1760555 . + . ID=gene:Rv1554;Name=frdC;biotype=protein_coding;description=Probable fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1554;logic_name=ena Chromosome ena mRNA 1760175 1760555 . + . ID=transcript:Rv1554;Parent=gene:Rv1554;Name=frdC-1;biotype=protein_coding;transcript_id=Rv1554 Chromosome ena exon 1760175 1760555 . + . Parent=transcript:Rv1554;Name=Rv1554-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1554-1;rank=1 Chromosome ena CDS 1760175 1760555 . + 0 ID=CDS:Rv1554;Parent=transcript:Rv1554;protein_id=Rv1554 ### -Chromosome ena gene 1760552 1760929 . + . ID=gene:Rv1555;Name=frdD;biotype=protein_coding;description=Probable fumarate reductase [membrane anchor subunit] FrdD (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1555;logic_name=ena +Chromosome ena gene 1760552 1760929 . + . ID=gene:Rv1555;Name=frdD;biotype=protein_coding;description=Probable fumarate reductase [membrane anchor subunit] FrdD (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv1555;logic_name=ena Chromosome ena mRNA 1760552 1760929 . + . ID=transcript:Rv1555;Parent=gene:Rv1555;Name=frdD-1;biotype=protein_coding;transcript_id=Rv1555 Chromosome ena exon 1760552 1760929 . + . Parent=transcript:Rv1555;Name=Rv1555-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1555-1;rank=1 Chromosome ena CDS 1760552 1760929 . + 0 ID=CDS:Rv1555;Parent=transcript:Rv1555;protein_id=Rv1555 ### -Chromosome ena gene 1760997 1761605 . + . ID=gene:Rv1556;biotype=protein_coding;description=Possible regulatory protein;gene_id=Rv1556;logic_name=ena +Chromosome ena gene 1760997 1761605 . + . ID=gene:Rv1556;biotype=protein_coding;description=Possible regulatory protein;gene_id=Rv1556;logic_name=ena Chromosome ena mRNA 1760997 1761605 . + . ID=transcript:Rv1556;Parent=gene:Rv1556;biotype=protein_coding;transcript_id=Rv1556 Chromosome ena exon 1760997 1761605 . + . Parent=transcript:Rv1556;Name=Rv1556-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1556-1;rank=1 Chromosome ena CDS 1760997 1761605 . + 0 ID=CDS:Rv1556;Parent=transcript:Rv1556;protein_id=Rv1556 ### -Chromosome ena gene 1761744 1762937 . + . ID=gene:Rv1557;Name=mmpL6;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL6;gene_id=Rv1557;logic_name=ena +Chromosome ena gene 1761744 1762937 . + . ID=gene:Rv1557;Name=mmpL6;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL6;gene_id=Rv1557;logic_name=ena Chromosome ena mRNA 1761744 1762937 . + . ID=transcript:Rv1557;Parent=gene:Rv1557;Name=mmpL6-1;biotype=protein_coding;transcript_id=Rv1557 Chromosome ena exon 1761744 1762937 . + . Parent=transcript:Rv1557;Name=Rv1557-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1557-1;rank=1 Chromosome ena CDS 1761744 1762937 . + 0 ID=CDS:Rv1557;Parent=transcript:Rv1557;protein_id=Rv1557 ### -Chromosome ena gene 1762947 1763393 . + . ID=gene:Rv1558;biotype=protein_coding;description=Conserved protein;gene_id=Rv1558;logic_name=ena +Chromosome ena gene 1762947 1763393 . + . ID=gene:Rv1558;biotype=protein_coding;description=Conserved protein;gene_id=Rv1558;logic_name=ena Chromosome ena mRNA 1762947 1763393 . + . ID=transcript:Rv1558;Parent=gene:Rv1558;biotype=protein_coding;transcript_id=Rv1558 Chromosome ena exon 1762947 1763393 . + . Parent=transcript:Rv1558;Name=Rv1558-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1558-1;rank=1 Chromosome ena CDS 1762947 1763393 . + 0 ID=CDS:Rv1558;Parent=transcript:Rv1558;protein_id=Rv1558 ### -Chromosome ena gene 1763428 1764717 . + . ID=gene:Rv1559;Name=ilvA;biotype=protein_coding;description=Probable threonine dehydratase IlvA;gene_id=Rv1559;logic_name=ena +Chromosome ena gene 1763428 1764717 . + . ID=gene:Rv1559;Name=ilvA;biotype=protein_coding;description=Probable threonine dehydratase IlvA;gene_id=Rv1559;logic_name=ena Chromosome ena mRNA 1763428 1764717 . + . ID=transcript:Rv1559;Parent=gene:Rv1559;Name=ilvA-1;biotype=protein_coding;transcript_id=Rv1559 Chromosome ena exon 1763428 1764717 . + . Parent=transcript:Rv1559;Name=Rv1559-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1559-1;rank=1 Chromosome ena CDS 1763428 1764717 . + 0 ID=CDS:Rv1559;Parent=transcript:Rv1559;protein_id=Rv1559 ### -Chromosome ena gene 1764755 1764973 . + . ID=gene:Rv1560;Name=vapB11;biotype=protein_coding;description=Possible antitoxin VapB11;gene_id=Rv1560;logic_name=ena +Chromosome ena gene 1764755 1764973 . + . ID=gene:Rv1560;Name=vapB11;biotype=protein_coding;description=Possible antitoxin VapB11;gene_id=Rv1560;logic_name=ena Chromosome ena mRNA 1764755 1764973 . + . ID=transcript:Rv1560;Parent=gene:Rv1560;Name=vapB11-1;biotype=protein_coding;transcript_id=Rv1560 Chromosome ena exon 1764755 1764973 . + . Parent=transcript:Rv1560;Name=Rv1560-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1560-1;rank=1 Chromosome ena CDS 1764755 1764973 . + 0 ID=CDS:Rv1560;Parent=transcript:Rv1560;protein_id=Rv1560 ### -Chromosome ena gene 1764979 1765383 . + . ID=gene:Rv1561;Name=vapC11;biotype=protein_coding;description=Possible toxin VapC11;gene_id=Rv1561;logic_name=ena +Chromosome ena gene 1764979 1765383 . + . ID=gene:Rv1561;Name=vapC11;biotype=protein_coding;description=Possible toxin VapC11;gene_id=Rv1561;logic_name=ena Chromosome ena mRNA 1764979 1765383 . + . ID=transcript:Rv1561;Parent=gene:Rv1561;Name=vapC11-1;biotype=protein_coding;transcript_id=Rv1561 Chromosome ena exon 1764979 1765383 . + . Parent=transcript:Rv1561;Name=Rv1561-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1561-1;rank=1 Chromosome ena CDS 1764979 1765383 . + 0 ID=CDS:Rv1561;Parent=transcript:Rv1561;protein_id=Rv1561 ### -Chromosome ena gene 1765400 1767142 . - . ID=gene:Rv1562c;Name=treZ;biotype=protein_coding;description=Maltooligosyltrehalose trehalohydrolase TreZ;gene_id=Rv1562c;logic_name=ena +Chromosome ena gene 1765400 1767142 . - . ID=gene:Rv1562c;Name=treZ;biotype=protein_coding;description=Maltooligosyltrehalose trehalohydrolase TreZ;gene_id=Rv1562c;logic_name=ena Chromosome ena mRNA 1765400 1767142 . - . ID=transcript:Rv1562c;Parent=gene:Rv1562c;Name=treZ-1;biotype=protein_coding;transcript_id=Rv1562c Chromosome ena exon 1765400 1767142 . - . Parent=transcript:Rv1562c;Name=Rv1562c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1562c-1;rank=1 Chromosome ena CDS 1765400 1767142 . - 0 ID=CDS:Rv1562c;Parent=transcript:Rv1562c;protein_id=Rv1562c ### -Chromosome ena gene 1767135 1769432 . - . ID=gene:Rv1563c;Name=treY;biotype=protein_coding;description=Maltooligosyltrehalose synthase TreY;gene_id=Rv1563c;logic_name=ena +Chromosome ena gene 1767135 1769432 . - . ID=gene:Rv1563c;Name=treY;biotype=protein_coding;description=Maltooligosyltrehalose synthase TreY;gene_id=Rv1563c;logic_name=ena Chromosome ena mRNA 1767135 1769432 . - . ID=transcript:Rv1563c;Parent=gene:Rv1563c;Name=treY-1;biotype=protein_coding;transcript_id=Rv1563c Chromosome ena exon 1767135 1769432 . - . Parent=transcript:Rv1563c;Name=Rv1563c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1563c-1;rank=1 Chromosome ena CDS 1767135 1769432 . - 0 ID=CDS:Rv1563c;Parent=transcript:Rv1563c;protein_id=Rv1563c ### -Chromosome ena gene 1769436 1771601 . - . ID=gene:Rv1564c;Name=treX;biotype=protein_coding;description=Probable maltooligosyltrehalose synthase TreX;gene_id=Rv1564c;logic_name=ena +Chromosome ena gene 1769436 1771601 . - . ID=gene:Rv1564c;Name=treX;biotype=protein_coding;description=Probable maltooligosyltrehalose synthase TreX;gene_id=Rv1564c;logic_name=ena Chromosome ena mRNA 1769436 1771601 . - . ID=transcript:Rv1564c;Parent=gene:Rv1564c;Name=treX-1;biotype=protein_coding;transcript_id=Rv1564c Chromosome ena exon 1769436 1771601 . - . Parent=transcript:Rv1564c;Name=Rv1564c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1564c-1;rank=1 Chromosome ena CDS 1769436 1771601 . - 0 ID=CDS:Rv1564c;Parent=transcript:Rv1564c;protein_id=Rv1564c ### -Chromosome ena gene 1771640 1773829 . - . ID=gene:Rv1565c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1565c;logic_name=ena +Chromosome ena gene 1771640 1773829 . - . ID=gene:Rv1565c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1565c;logic_name=ena Chromosome ena mRNA 1771640 1773829 . - . ID=transcript:Rv1565c;Parent=gene:Rv1565c;biotype=protein_coding;transcript_id=Rv1565c Chromosome ena exon 1771640 1773829 . - . Parent=transcript:Rv1565c;Name=Rv1565c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1565c-1;rank=1 Chromosome ena CDS 1771640 1773829 . - 0 ID=CDS:Rv1565c;Parent=transcript:Rv1565c;protein_id=Rv1565c ### -Chromosome ena gene 1773928 1774620 . - . ID=gene:Rv1566c;biotype=protein_coding;description=Possible Inv protein;gene_id=Rv1566c;logic_name=ena +Chromosome ena gene 1773928 1774620 . - . ID=gene:Rv1566c;biotype=protein_coding;description=Possible Inv protein;gene_id=Rv1566c;logic_name=ena Chromosome ena mRNA 1773928 1774620 . - . ID=transcript:Rv1566c;Parent=gene:Rv1566c;biotype=protein_coding;transcript_id=Rv1566c Chromosome ena exon 1773928 1774620 . - . Parent=transcript:Rv1566c;Name=Rv1566c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1566c-1;rank=1 Chromosome ena CDS 1773928 1774620 . - 0 ID=CDS:Rv1566c;Parent=transcript:Rv1566c;protein_id=Rv1566c ### -Chromosome ena gene 1774860 1775144 . - . ID=gene:Rv1567c;biotype=protein_coding;description=Probable hypothetical membrane protein;gene_id=Rv1567c;logic_name=ena +Chromosome ena gene 1774860 1775144 . - . ID=gene:Rv1567c;biotype=protein_coding;description=Probable hypothetical membrane protein;gene_id=Rv1567c;logic_name=ena Chromosome ena mRNA 1774860 1775144 . - . ID=transcript:Rv1567c;Parent=gene:Rv1567c;biotype=protein_coding;transcript_id=Rv1567c Chromosome ena exon 1774860 1775144 . - . Parent=transcript:Rv1567c;Name=Rv1567c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1567c-1;rank=1 Chromosome ena CDS 1774860 1775144 . - 0 ID=CDS:Rv1567c;Parent=transcript:Rv1567c;protein_id=Rv1567c ### -Chromosome ena gene 1775392 1776705 . + . ID=gene:Rv1568;Name=bioA;biotype=protein_coding;description=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA;gene_id=Rv1568;logic_name=ena +Chromosome ena gene 1775392 1776705 . + . ID=gene:Rv1568;Name=bioA;biotype=protein_coding;description=Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA;gene_id=Rv1568;logic_name=ena Chromosome ena mRNA 1775392 1776705 . + . ID=transcript:Rv1568;Parent=gene:Rv1568;Name=bioA-1;biotype=protein_coding;transcript_id=Rv1568 Chromosome ena exon 1775392 1776705 . + . Parent=transcript:Rv1568;Name=Rv1568-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1568-1;rank=1 Chromosome ena CDS 1775392 1776705 . + 0 ID=CDS:Rv1568;Parent=transcript:Rv1568;protein_id=Rv1568 ### -Chromosome ena gene 1776702 1777862 . + . ID=gene:Rv1569;Name=bioF1;biotype=protein_coding;description=Probable 8-amino-7-oxononanoate synthase BioF1 (AONS) (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase);gene_id=Rv1569;logic_name=ena +Chromosome ena gene 1776702 1777862 . + . ID=gene:Rv1569;Name=bioF1;biotype=protein_coding;description=Probable 8-amino-7-oxononanoate synthase BioF1 (AONS) (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase);gene_id=Rv1569;logic_name=ena Chromosome ena mRNA 1776702 1777862 . + . ID=transcript:Rv1569;Parent=gene:Rv1569;Name=bioF1-1;biotype=protein_coding;transcript_id=Rv1569 Chromosome ena exon 1776702 1777862 . + . Parent=transcript:Rv1569;Name=Rv1569-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1569-1;rank=1 Chromosome ena CDS 1776702 1777862 . + 0 ID=CDS:Rv1569;Parent=transcript:Rv1569;protein_id=Rv1569 ### -Chromosome ena gene 1777859 1778539 . + . ID=gene:Rv1570;Name=bioD;biotype=protein_coding;description=Dethiobiotin synthetase BioD;gene_id=Rv1570;logic_name=ena +Chromosome ena gene 1777859 1778539 . + . ID=gene:Rv1570;Name=bioD;biotype=protein_coding;description=Dethiobiotin synthetase BioD;gene_id=Rv1570;logic_name=ena Chromosome ena mRNA 1777859 1778539 . + . ID=transcript:Rv1570;Parent=gene:Rv1570;Name=bioD-1;biotype=protein_coding;transcript_id=Rv1570 Chromosome ena exon 1777859 1778539 . + . Parent=transcript:Rv1570;Name=Rv1570-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1570-1;rank=1 Chromosome ena CDS 1777859 1778539 . + 0 ID=CDS:Rv1570;Parent=transcript:Rv1570;protein_id=Rv1570 ### -Chromosome ena gene 1778539 1779048 . + . ID=gene:Rv1571;biotype=protein_coding;description=Conserved protein;gene_id=Rv1571;logic_name=ena +Chromosome ena gene 1778539 1779048 . + . ID=gene:Rv1571;biotype=protein_coding;description=Conserved protein;gene_id=Rv1571;logic_name=ena Chromosome ena mRNA 1778539 1779048 . + . ID=transcript:Rv1571;Parent=gene:Rv1571;biotype=protein_coding;transcript_id=Rv1571 Chromosome ena exon 1778539 1779048 . + . Parent=transcript:Rv1571;Name=Rv1571-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1571-1;rank=1 Chromosome ena CDS 1778539 1779048 . + 0 ID=CDS:Rv1571;Parent=transcript:Rv1571;protein_id=Rv1571 ### -Chromosome ena gene 1779194 1779298 . - . ID=gene:Rv1572c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1572c;logic_name=ena +Chromosome ena gene 1779194 1779298 . - . ID=gene:Rv1572c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1572c;logic_name=ena Chromosome ena mRNA 1779194 1779298 . - . ID=transcript:Rv1572c;Parent=gene:Rv1572c;biotype=protein_coding;transcript_id=Rv1572c Chromosome ena exon 1779194 1779298 . - . Parent=transcript:Rv1572c;Name=Rv1572c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1572c-1;rank=1 Chromosome ena CDS 1779194 1779298 . - 0 ID=CDS:Rv1572c;Parent=transcript:Rv1572c;protein_id=Rv1572c ### -Chromosome ena gene 1779314 1779724 . + . ID=gene:Rv1573;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1573;logic_name=ena +Chromosome ena gene 1779314 1779724 . + . ID=gene:Rv1573;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1573;logic_name=ena Chromosome ena mRNA 1779314 1779724 . + . ID=transcript:Rv1573;Parent=gene:Rv1573;biotype=protein_coding;transcript_id=Rv1573 Chromosome ena exon 1779314 1779724 . + . Parent=transcript:Rv1573;Name=Rv1573-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1573-1;rank=1 Chromosome ena CDS 1779314 1779724 . + 0 ID=CDS:Rv1573;Parent=transcript:Rv1573;protein_id=Rv1573 ### -Chromosome ena gene 1779930 1780241 . + . ID=gene:Rv1574;biotype=protein_coding;description=Probable PhiRv1 phage related protein;gene_id=Rv1574;logic_name=ena +Chromosome ena gene 1779930 1780241 . + . ID=gene:Rv1574;biotype=protein_coding;description=Probable PhiRv1 phage related protein;gene_id=Rv1574;logic_name=ena Chromosome ena mRNA 1779930 1780241 . + . ID=transcript:Rv1574;Parent=gene:Rv1574;biotype=protein_coding;transcript_id=Rv1574 Chromosome ena exon 1779930 1780241 . + . Parent=transcript:Rv1574;Name=Rv1574-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1574-1;rank=1 Chromosome ena CDS 1779930 1780241 . + 0 ID=CDS:Rv1574;Parent=transcript:Rv1574;protein_id=Rv1574 ### -Chromosome ena gene 1780199 1780699 . + . ID=gene:Rv1575;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1575;logic_name=ena +Chromosome ena gene 1780199 1780699 . + . ID=gene:Rv1575;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1575;logic_name=ena Chromosome ena mRNA 1780199 1780699 . + . ID=transcript:Rv1575;Parent=gene:Rv1575;biotype=protein_coding;transcript_id=Rv1575 Chromosome ena exon 1780199 1780699 . + . Parent=transcript:Rv1575;Name=Rv1575-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1575-1;rank=1 Chromosome ena CDS 1780199 1780699 . + 0 ID=CDS:Rv1575;Parent=transcript:Rv1575;protein_id=Rv1575 ### -Chromosome ena gene 1780643 1782064 . - . ID=gene:Rv1576c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1576c;logic_name=ena +Chromosome ena gene 1780643 1782064 . - . ID=gene:Rv1576c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1576c;logic_name=ena Chromosome ena mRNA 1780643 1782064 . - . ID=transcript:Rv1576c;Parent=gene:Rv1576c;biotype=protein_coding;transcript_id=Rv1576c Chromosome ena exon 1780643 1782064 . - . Parent=transcript:Rv1576c;Name=Rv1576c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1576c-1;rank=1 Chromosome ena CDS 1780643 1782064 . - 0 ID=CDS:Rv1576c;Parent=transcript:Rv1576c;protein_id=Rv1576c ### -Chromosome ena gene 1782072 1782584 . - . ID=gene:Rv1577c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1577c;logic_name=ena +Chromosome ena gene 1782072 1782584 . - . ID=gene:Rv1577c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1577c;logic_name=ena Chromosome ena mRNA 1782072 1782584 . - . ID=transcript:Rv1577c;Parent=gene:Rv1577c;biotype=protein_coding;transcript_id=Rv1577c Chromosome ena exon 1782072 1782584 . - . Parent=transcript:Rv1577c;Name=Rv1577c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1577c-1;rank=1 Chromosome ena CDS 1782072 1782584 . - 0 ID=CDS:Rv1577c;Parent=transcript:Rv1577c;protein_id=Rv1577c ### -Chromosome ena gene 1782758 1783228 . - . ID=gene:Rv1578c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1578c;logic_name=ena +Chromosome ena gene 1782758 1783228 . - . ID=gene:Rv1578c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1578c;logic_name=ena Chromosome ena mRNA 1782758 1783228 . - . ID=transcript:Rv1578c;Parent=gene:Rv1578c;biotype=protein_coding;transcript_id=Rv1578c Chromosome ena exon 1782758 1783228 . - . Parent=transcript:Rv1578c;Name=Rv1578c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1578c-1;rank=1 Chromosome ena CDS 1782758 1783228 . - 0 ID=CDS:Rv1578c;Parent=transcript:Rv1578c;protein_id=Rv1578c ### -Chromosome ena gene 1783309 1783623 . - . ID=gene:Rv1579c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1579c;logic_name=ena +Chromosome ena gene 1783309 1783623 . - . ID=gene:Rv1579c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1579c;logic_name=ena Chromosome ena mRNA 1783309 1783623 . - . ID=transcript:Rv1579c;Parent=gene:Rv1579c;biotype=protein_coding;transcript_id=Rv1579c Chromosome ena exon 1783309 1783623 . - . Parent=transcript:Rv1579c;Name=Rv1579c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1579c-1;rank=1 Chromosome ena CDS 1783309 1783623 . - 0 ID=CDS:Rv1579c;Parent=transcript:Rv1579c;protein_id=Rv1579c ### -Chromosome ena gene 1783620 1783892 . - . ID=gene:Rv1580c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1580c;logic_name=ena +Chromosome ena gene 1783620 1783892 . - . ID=gene:Rv1580c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1580c;logic_name=ena Chromosome ena mRNA 1783620 1783892 . - . ID=transcript:Rv1580c;Parent=gene:Rv1580c;biotype=protein_coding;transcript_id=Rv1580c Chromosome ena exon 1783620 1783892 . - . Parent=transcript:Rv1580c;Name=Rv1580c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1580c-1;rank=1 Chromosome ena CDS 1783620 1783892 . - 0 ID=CDS:Rv1580c;Parent=transcript:Rv1580c;protein_id=Rv1580c ### -Chromosome ena gene 1783906 1784301 . - . ID=gene:Rv1581c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1581c;logic_name=ena +Chromosome ena gene 1783906 1784301 . - . ID=gene:Rv1581c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1581c;logic_name=ena Chromosome ena mRNA 1783906 1784301 . - . ID=transcript:Rv1581c;Parent=gene:Rv1581c;biotype=protein_coding;transcript_id=Rv1581c Chromosome ena exon 1783906 1784301 . - . Parent=transcript:Rv1581c;Name=Rv1581c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1581c-1;rank=1 Chromosome ena CDS 1783906 1784301 . - 0 ID=CDS:Rv1581c;Parent=transcript:Rv1581c;protein_id=Rv1581c ### -Chromosome ena gene 1784497 1785912 . - . ID=gene:Rv1582c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1582c;logic_name=ena +Chromosome ena gene 1784497 1785912 . - . ID=gene:Rv1582c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1582c;logic_name=ena Chromosome ena mRNA 1784497 1785912 . - . ID=transcript:Rv1582c;Parent=gene:Rv1582c;biotype=protein_coding;transcript_id=Rv1582c Chromosome ena exon 1784497 1785912 . - . Parent=transcript:Rv1582c;Name=Rv1582c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1582c-1;rank=1 Chromosome ena CDS 1784497 1785912 . - 0 ID=CDS:Rv1582c;Parent=transcript:Rv1582c;protein_id=Rv1582c ### -Chromosome ena gene 1785912 1786310 . - . ID=gene:Rv1583c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1583c;logic_name=ena +Chromosome ena gene 1785912 1786310 . - . ID=gene:Rv1583c;biotype=protein_coding;description=Probable PhiRv1 phage protein;gene_id=Rv1583c;logic_name=ena Chromosome ena mRNA 1785912 1786310 . - . ID=transcript:Rv1583c;Parent=gene:Rv1583c;biotype=protein_coding;transcript_id=Rv1583c Chromosome ena exon 1785912 1786310 . - . Parent=transcript:Rv1583c;Name=Rv1583c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1583c-1;rank=1 Chromosome ena CDS 1785912 1786310 . - 0 ID=CDS:Rv1583c;Parent=transcript:Rv1583c;protein_id=Rv1583c ### -Chromosome ena gene 1786307 1786528 . - . ID=gene:Rv1584c;biotype=protein_coding;description=Possible PhiRv1 phage protein;gene_id=Rv1584c;logic_name=ena +Chromosome ena gene 1786307 1786528 . - . ID=gene:Rv1584c;biotype=protein_coding;description=Possible PhiRv1 phage protein;gene_id=Rv1584c;logic_name=ena Chromosome ena mRNA 1786307 1786528 . - . ID=transcript:Rv1584c;Parent=gene:Rv1584c;biotype=protein_coding;transcript_id=Rv1584c Chromosome ena exon 1786307 1786528 . - . Parent=transcript:Rv1584c;Name=Rv1584c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1584c-1;rank=1 Chromosome ena CDS 1786307 1786528 . - 0 ID=CDS:Rv1584c;Parent=transcript:Rv1584c;protein_id=Rv1584c ### -Chromosome ena gene 1786584 1787099 . - . ID=gene:Rv1585c;biotype=protein_coding;description=Possible phage PhiRv1 protein;gene_id=Rv1585c;logic_name=ena +Chromosome ena gene 1786584 1787099 . - . ID=gene:Rv1585c;biotype=protein_coding;description=Possible phage PhiRv1 protein;gene_id=Rv1585c;logic_name=ena Chromosome ena mRNA 1786584 1787099 . - . ID=transcript:Rv1585c;Parent=gene:Rv1585c;biotype=protein_coding;transcript_id=Rv1585c Chromosome ena exon 1786584 1787099 . - . Parent=transcript:Rv1585c;Name=Rv1585c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1585c-1;rank=1 Chromosome ena CDS 1786584 1787099 . - 0 ID=CDS:Rv1585c;Parent=transcript:Rv1585c;protein_id=Rv1585c ### -Chromosome ena gene 1787096 1788505 . - . ID=gene:Rv1586c;biotype=protein_coding;description=Probable PhiRv1 integrase;gene_id=Rv1586c;logic_name=ena +Chromosome ena gene 1787096 1788505 . - . ID=gene:Rv1586c;biotype=protein_coding;description=Probable PhiRv1 integrase;gene_id=Rv1586c;logic_name=ena Chromosome ena mRNA 1787096 1788505 . - . ID=transcript:Rv1586c;Parent=gene:Rv1586c;biotype=protein_coding;transcript_id=Rv1586c Chromosome ena exon 1787096 1788505 . - . Parent=transcript:Rv1586c;Name=Rv1586c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1586c-1;rank=1 Chromosome ena CDS 1787096 1788505 . - 0 ID=CDS:Rv1586c;Parent=transcript:Rv1586c;protein_id=Rv1586c ### -Chromosome ena gene 1788162 1789163 . - . ID=gene:Rv1587c;biotype=protein_coding;description=Partial REP13E12 repeat protein;gene_id=Rv1587c;logic_name=ena +Chromosome ena gene 1788162 1789163 . - . ID=gene:Rv1587c;biotype=protein_coding;description=Partial REP13E12 repeat protein;gene_id=Rv1587c;logic_name=ena Chromosome ena mRNA 1788162 1789163 . - . ID=transcript:Rv1587c;Parent=gene:Rv1587c;biotype=protein_coding;transcript_id=Rv1587c Chromosome ena exon 1788162 1789163 . - . Parent=transcript:Rv1587c;Name=Rv1587c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1587c-1;rank=1 Chromosome ena CDS 1788162 1789163 . - 0 ID=CDS:Rv1587c;Parent=transcript:Rv1587c;protein_id=Rv1587c ### -Chromosome ena gene 1789168 1789836 . - . ID=gene:Rv1588c;biotype=protein_coding;description=Partial REP13E12 repeat protein;gene_id=Rv1588c;logic_name=ena +Chromosome ena gene 1789168 1789836 . - . ID=gene:Rv1588c;biotype=protein_coding;description=Partial REP13E12 repeat protein;gene_id=Rv1588c;logic_name=ena Chromosome ena mRNA 1789168 1789836 . - . ID=transcript:Rv1588c;Parent=gene:Rv1588c;biotype=protein_coding;transcript_id=Rv1588c Chromosome ena exon 1789168 1789836 . - . Parent=transcript:Rv1588c;Name=Rv1588c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1588c-1;rank=1 Chromosome ena CDS 1789168 1789836 . - 0 ID=CDS:Rv1588c;Parent=transcript:Rv1588c;protein_id=Rv1588c ### -Chromosome ena gene 1790284 1791333 . + . ID=gene:Rv1589;Name=bioB;biotype=protein_coding;description=Probable biotin synthetase BioB;gene_id=Rv1589;logic_name=ena +Chromosome ena gene 1790284 1791333 . + . ID=gene:Rv1589;Name=bioB;biotype=protein_coding;description=Probable biotin synthetase BioB;gene_id=Rv1589;logic_name=ena Chromosome ena mRNA 1790284 1791333 . + . ID=transcript:Rv1589;Parent=gene:Rv1589;Name=bioB-1;biotype=protein_coding;transcript_id=Rv1589 Chromosome ena exon 1790284 1791333 . + . Parent=transcript:Rv1589;Name=Rv1589-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1589-1;rank=1 Chromosome ena CDS 1790284 1791333 . + 0 ID=CDS:Rv1589;Parent=transcript:Rv1589;protein_id=Rv1589 ### -Chromosome ena gene 1791334 1791573 . + . ID=gene:Rv1590;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1590;logic_name=ena +Chromosome ena gene 1791334 1791573 . + . ID=gene:Rv1590;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1590;logic_name=ena Chromosome ena mRNA 1791334 1791573 . + . ID=transcript:Rv1590;Parent=gene:Rv1590;biotype=protein_coding;transcript_id=Rv1590 Chromosome ena exon 1791334 1791573 . + . Parent=transcript:Rv1590;Name=Rv1590-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1590-1;rank=1 Chromosome ena CDS 1791334 1791573 . + 0 ID=CDS:Rv1590;Parent=transcript:Rv1590;protein_id=Rv1590 ### -Chromosome ena gene 1791570 1792235 . + . ID=gene:Rv1591;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1591;logic_name=ena +Chromosome ena gene 1791570 1792235 . + . ID=gene:Rv1591;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1591;logic_name=ena Chromosome ena mRNA 1791570 1792235 . + . ID=transcript:Rv1591;Parent=gene:Rv1591;biotype=protein_coding;transcript_id=Rv1591 Chromosome ena exon 1791570 1792235 . + . Parent=transcript:Rv1591;Name=Rv1591-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1591-1;rank=1 Chromosome ena CDS 1791570 1792235 . + 0 ID=CDS:Rv1591;Parent=transcript:Rv1591;protein_id=Rv1591 ### -Chromosome ena gene 1792400 1793740 . - . ID=gene:Rv1592c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1592c;logic_name=ena +Chromosome ena gene 1792400 1793740 . - . ID=gene:Rv1592c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1592c;logic_name=ena Chromosome ena mRNA 1792400 1793740 . - . ID=transcript:Rv1592c;Parent=gene:Rv1592c;biotype=protein_coding;transcript_id=Rv1592c Chromosome ena exon 1792400 1793740 . - . Parent=transcript:Rv1592c;Name=Rv1592c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1592c-1;rank=1 Chromosome ena CDS 1792400 1793740 . - 0 ID=CDS:Rv1592c;Parent=transcript:Rv1592c;protein_id=Rv1592c ### -Chromosome ena gene 1793997 1794707 . - . ID=gene:Rv1593c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1593c;logic_name=ena +Chromosome ena gene 1793997 1794707 . - . ID=gene:Rv1593c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1593c;logic_name=ena Chromosome ena mRNA 1793997 1794707 . - . ID=transcript:Rv1593c;Parent=gene:Rv1593c;biotype=protein_coding;transcript_id=Rv1593c Chromosome ena exon 1793997 1794707 . - . Parent=transcript:Rv1593c;Name=Rv1593c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1593c-1;rank=1 Chromosome ena CDS 1793997 1794707 . - 0 ID=CDS:Rv1593c;Parent=transcript:Rv1593c;protein_id=Rv1593c ### -Chromosome ena gene 1794756 1795805 . + . ID=gene:Rv1594;Name=nadA;biotype=protein_coding;description=Probable quinolinate synthetase NadA;gene_id=Rv1594;logic_name=ena +Chromosome ena gene 1794756 1795805 . + . ID=gene:Rv1594;Name=nadA;biotype=protein_coding;description=Probable quinolinate synthetase NadA;gene_id=Rv1594;logic_name=ena Chromosome ena mRNA 1794756 1795805 . + . ID=transcript:Rv1594;Parent=gene:Rv1594;Name=nadA-1;biotype=protein_coding;transcript_id=Rv1594 Chromosome ena exon 1794756 1795805 . + . Parent=transcript:Rv1594;Name=Rv1594-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1594-1;rank=1 Chromosome ena CDS 1794756 1795805 . + 0 ID=CDS:Rv1594;Parent=transcript:Rv1594;protein_id=Rv1594 ### -Chromosome ena gene 1795805 1797388 . + . ID=gene:Rv1595;Name=nadB;biotype=protein_coding;description=Probable L-aspartate oxidase NadB;gene_id=Rv1595;logic_name=ena +Chromosome ena gene 1795805 1797388 . + . ID=gene:Rv1595;Name=nadB;biotype=protein_coding;description=Probable L-aspartate oxidase NadB;gene_id=Rv1595;logic_name=ena Chromosome ena mRNA 1795805 1797388 . + . ID=transcript:Rv1595;Parent=gene:Rv1595;Name=nadB-1;biotype=protein_coding;transcript_id=Rv1595 Chromosome ena exon 1795805 1797388 . + . Parent=transcript:Rv1595;Name=Rv1595-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1595-1;rank=1 Chromosome ena CDS 1795805 1797388 . + 0 ID=CDS:Rv1595;Parent=transcript:Rv1595;protein_id=Rv1595 ### -Chromosome ena gene 1797388 1798245 . + . ID=gene:Rv1596;Name=nadC;biotype=protein_coding;description=Probable nicotinate-nucleotide pyrophosphatase NadC;gene_id=Rv1596;logic_name=ena +Chromosome ena gene 1797388 1798245 . + . ID=gene:Rv1596;Name=nadC;biotype=protein_coding;description=Probable nicotinate-nucleotide pyrophosphatase NadC;gene_id=Rv1596;logic_name=ena Chromosome ena mRNA 1797388 1798245 . + . ID=transcript:Rv1596;Parent=gene:Rv1596;Name=nadC-1;biotype=protein_coding;transcript_id=Rv1596 Chromosome ena exon 1797388 1798245 . + . Parent=transcript:Rv1596;Name=Rv1596-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1596-1;rank=1 Chromosome ena CDS 1797388 1798245 . + 0 ID=CDS:Rv1596;Parent=transcript:Rv1596;protein_id=Rv1596 ### -Chromosome ena gene 1798294 1799052 . + . ID=gene:Rv1597;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1597;logic_name=ena +Chromosome ena gene 1798294 1799052 . + . ID=gene:Rv1597;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1597;logic_name=ena Chromosome ena mRNA 1798294 1799052 . + . ID=transcript:Rv1597;Parent=gene:Rv1597;biotype=protein_coding;transcript_id=Rv1597 Chromosome ena exon 1798294 1799052 . + . Parent=transcript:Rv1597;Name=Rv1597-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1597-1;rank=1 Chromosome ena CDS 1798294 1799052 . + 0 ID=CDS:Rv1597;Parent=transcript:Rv1597;protein_id=Rv1597 ### -Chromosome ena gene 1799073 1799483 . - . ID=gene:Rv1598c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1598c;logic_name=ena +Chromosome ena gene 1799073 1799483 . - . ID=gene:Rv1598c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1598c;logic_name=ena Chromosome ena mRNA 1799073 1799483 . - . ID=transcript:Rv1598c;Parent=gene:Rv1598c;biotype=protein_coding;transcript_id=Rv1598c Chromosome ena exon 1799073 1799483 . - . Parent=transcript:Rv1598c;Name=Rv1598c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1598c-1;rank=1 Chromosome ena CDS 1799073 1799483 . - 0 ID=CDS:Rv1598c;Parent=transcript:Rv1598c;protein_id=Rv1598c ### -Chromosome ena gene 1799583 1800899 . + . ID=gene:Rv1599;Name=hisD;biotype=protein_coding;description=Probable histidinol dehydrogenase HisD (HDH);gene_id=Rv1599;logic_name=ena +Chromosome ena gene 1799583 1800899 . + . ID=gene:Rv1599;Name=hisD;biotype=protein_coding;description=Probable histidinol dehydrogenase HisD (HDH);gene_id=Rv1599;logic_name=ena Chromosome ena mRNA 1799583 1800899 . + . ID=transcript:Rv1599;Parent=gene:Rv1599;Name=hisD-1;biotype=protein_coding;transcript_id=Rv1599 Chromosome ena exon 1799583 1800899 . + . Parent=transcript:Rv1599;Name=Rv1599-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1599-1;rank=1 Chromosome ena CDS 1799583 1800899 . + 0 ID=CDS:Rv1599;Parent=transcript:Rv1599;protein_id=Rv1599 ### -Chromosome ena gene 1800896 1802038 . + . ID=gene:Rv1600;Name=hisC1;biotype=protein_coding;description=Probable histidinol-phosphate aminotransferase HisC1;gene_id=Rv1600;logic_name=ena +Chromosome ena gene 1800896 1802038 . + . ID=gene:Rv1600;Name=hisC1;biotype=protein_coding;description=Probable histidinol-phosphate aminotransferase HisC1;gene_id=Rv1600;logic_name=ena Chromosome ena mRNA 1800896 1802038 . + . ID=transcript:Rv1600;Parent=gene:Rv1600;Name=hisC1-1;biotype=protein_coding;transcript_id=Rv1600 Chromosome ena exon 1800896 1802038 . + . Parent=transcript:Rv1600;Name=Rv1600-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1600-1;rank=1 Chromosome ena CDS 1800896 1802038 . + 0 ID=CDS:Rv1600;Parent=transcript:Rv1600;protein_id=Rv1600 ### -Chromosome ena gene 1802035 1802667 . + . ID=gene:Rv1601;Name=hisB;biotype=protein_coding;description=Probable imidazole glycerol-phosphate dehydratase HisB;gene_id=Rv1601;logic_name=ena +Chromosome ena gene 1802035 1802667 . + . ID=gene:Rv1601;Name=hisB;biotype=protein_coding;description=Probable imidazole glycerol-phosphate dehydratase HisB;gene_id=Rv1601;logic_name=ena Chromosome ena mRNA 1802035 1802667 . + . ID=transcript:Rv1601;Parent=gene:Rv1601;Name=hisB-1;biotype=protein_coding;transcript_id=Rv1601 Chromosome ena exon 1802035 1802667 . + . Parent=transcript:Rv1601;Name=Rv1601-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1601-1;rank=1 Chromosome ena CDS 1802035 1802667 . + 0 ID=CDS:Rv1601;Parent=transcript:Rv1601;protein_id=Rv1601 ### -Chromosome ena gene 1802664 1803284 . + . ID=gene:Rv1602;Name=hisH;biotype=protein_coding;description=Probable amidotransferase HisH;gene_id=Rv1602;logic_name=ena +Chromosome ena gene 1802664 1803284 . + . ID=gene:Rv1602;Name=hisH;biotype=protein_coding;description=Probable amidotransferase HisH;gene_id=Rv1602;logic_name=ena Chromosome ena mRNA 1802664 1803284 . + . ID=transcript:Rv1602;Parent=gene:Rv1602;Name=hisH-1;biotype=protein_coding;transcript_id=Rv1602 Chromosome ena exon 1802664 1803284 . + . Parent=transcript:Rv1602;Name=Rv1602-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1602-1;rank=1 Chromosome ena CDS 1802664 1803284 . + 0 ID=CDS:Rv1602;Parent=transcript:Rv1602;protein_id=Rv1602 ### -Chromosome ena gene 1803294 1804031 . + . ID=gene:Rv1603;Name=hisA;biotype=protein_coding;description=Probable phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA;gene_id=Rv1603;logic_name=ena +Chromosome ena gene 1803294 1804031 . + . ID=gene:Rv1603;Name=hisA;biotype=protein_coding;description=Probable phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA;gene_id=Rv1603;logic_name=ena Chromosome ena mRNA 1803294 1804031 . + . ID=transcript:Rv1603;Parent=gene:Rv1603;Name=hisA-1;biotype=protein_coding;transcript_id=Rv1603 Chromosome ena exon 1803294 1804031 . + . Parent=transcript:Rv1603;Name=Rv1603-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1603-1;rank=1 Chromosome ena CDS 1803294 1804031 . + 0 ID=CDS:Rv1603;Parent=transcript:Rv1603;protein_id=Rv1603 ### -Chromosome ena gene 1804039 1804851 . + . ID=gene:Rv1604;Name=impA;biotype=protein_coding;description=Probable inositol-monophosphatase ImpA (imp);gene_id=Rv1604;logic_name=ena +Chromosome ena gene 1804039 1804851 . + . ID=gene:Rv1604;Name=impA;biotype=protein_coding;description=Probable inositol-monophosphatase ImpA (imp);gene_id=Rv1604;logic_name=ena Chromosome ena mRNA 1804039 1804851 . + . ID=transcript:Rv1604;Parent=gene:Rv1604;Name=impA-1;biotype=protein_coding;transcript_id=Rv1604 Chromosome ena exon 1804039 1804851 . + . Parent=transcript:Rv1604;Name=Rv1604-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1604-1;rank=1 Chromosome ena CDS 1804039 1804851 . + 0 ID=CDS:Rv1604;Parent=transcript:Rv1604;protein_id=Rv1604 ### -Chromosome ena gene 1804853 1805656 . + . ID=gene:Rv1605;Name=hisF;biotype=protein_coding;description=Probable cyclase HisF;gene_id=Rv1605;logic_name=ena +Chromosome ena gene 1804853 1805656 . + . ID=gene:Rv1605;Name=hisF;biotype=protein_coding;description=Probable cyclase HisF;gene_id=Rv1605;logic_name=ena Chromosome ena mRNA 1804853 1805656 . + . ID=transcript:Rv1605;Parent=gene:Rv1605;Name=hisF-1;biotype=protein_coding;transcript_id=Rv1605 Chromosome ena exon 1804853 1805656 . + . Parent=transcript:Rv1605;Name=Rv1605-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1605-1;rank=1 Chromosome ena CDS 1804853 1805656 . + 0 ID=CDS:Rv1605;Parent=transcript:Rv1605;protein_id=Rv1605 ### -Chromosome ena gene 1805653 1806000 . + . ID=gene:Rv1606;Name=hisI;biotype=protein_coding;description=Probable phosphoribosyl-AMP 1%2C6 cyclohydrolase HisI;gene_id=Rv1606;logic_name=ena +Chromosome ena gene 1805653 1806000 . + . ID=gene:Rv1606;Name=hisI;biotype=protein_coding;description=Probable phosphoribosyl-AMP 1%2C6 cyclohydrolase HisI;gene_id=Rv1606;logic_name=ena Chromosome ena mRNA 1805653 1806000 . + . ID=transcript:Rv1606;Parent=gene:Rv1606;Name=hisI-1;biotype=protein_coding;transcript_id=Rv1606 Chromosome ena exon 1805653 1806000 . + . Parent=transcript:Rv1606;Name=Rv1606-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1606-1;rank=1 Chromosome ena CDS 1805653 1806000 . + 0 ID=CDS:Rv1606;Parent=transcript:Rv1606;protein_id=Rv1606 ### -Chromosome ena gene 1806181 1807263 . + . ID=gene:Rv1607;Name=chaA;biotype=protein_coding;description=Probable ionic transporter integral membrane protein ChaA;gene_id=Rv1607;logic_name=ena +Chromosome ena gene 1806181 1807263 . + . ID=gene:Rv1607;Name=chaA;biotype=protein_coding;description=Probable ionic transporter integral membrane protein ChaA;gene_id=Rv1607;logic_name=ena Chromosome ena mRNA 1806181 1807263 . + . ID=transcript:Rv1607;Parent=gene:Rv1607;Name=chaA-1;biotype=protein_coding;transcript_id=Rv1607 Chromosome ena exon 1806181 1807263 . + . Parent=transcript:Rv1607;Name=Rv1607-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1607-1;rank=1 Chromosome ena CDS 1806181 1807263 . + 0 ID=CDS:Rv1607;Parent=transcript:Rv1607;protein_id=Rv1607 ### -Chromosome ena gene 1807298 1807762 . - . ID=gene:Rv1608c;Name=bcpB;biotype=protein_coding;description=Probable peroxidoxin BcpB;gene_id=Rv1608c;logic_name=ena +Chromosome ena gene 1807298 1807762 . - . ID=gene:Rv1608c;Name=bcpB;biotype=protein_coding;description=Probable peroxidoxin BcpB;gene_id=Rv1608c;logic_name=ena Chromosome ena mRNA 1807298 1807762 . - . ID=transcript:Rv1608c;Parent=gene:Rv1608c;Name=bcpB-1;biotype=protein_coding;transcript_id=Rv1608c Chromosome ena exon 1807298 1807762 . - . Parent=transcript:Rv1608c;Name=Rv1608c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1608c-1;rank=1 Chromosome ena CDS 1807298 1807762 . - 0 ID=CDS:Rv1608c;Parent=transcript:Rv1608c;protein_id=Rv1608c ### -Chromosome ena gene 1807903 1809453 . + . ID=gene:Rv1609;Name=trpE;biotype=protein_coding;description=Anthranilate synthase component I TrpE (glutamine amidotransferase);gene_id=Rv1609;logic_name=ena +Chromosome ena gene 1807903 1809453 . + . ID=gene:Rv1609;Name=trpE;biotype=protein_coding;description=Anthranilate synthase component I TrpE (glutamine amidotransferase);gene_id=Rv1609;logic_name=ena Chromosome ena mRNA 1807903 1809453 . + . ID=transcript:Rv1609;Parent=gene:Rv1609;Name=trpE-1;biotype=protein_coding;transcript_id=Rv1609 Chromosome ena exon 1807903 1809453 . + . Parent=transcript:Rv1609;Name=Rv1609-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1609-1;rank=1 Chromosome ena CDS 1807903 1809453 . + 0 ID=CDS:Rv1609;Parent=transcript:Rv1609;protein_id=Rv1609 ### -Chromosome ena gene 1809443 1810150 . + . ID=gene:Rv1610;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1610;logic_name=ena +Chromosome ena gene 1809443 1810150 . + . ID=gene:Rv1610;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv1610;logic_name=ena Chromosome ena mRNA 1809443 1810150 . + . ID=transcript:Rv1610;Parent=gene:Rv1610;biotype=protein_coding;transcript_id=Rv1610 Chromosome ena exon 1809443 1810150 . + . Parent=transcript:Rv1610;Name=Rv1610-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1610-1;rank=1 Chromosome ena CDS 1809443 1810150 . + 0 ID=CDS:Rv1610;Parent=transcript:Rv1610;protein_id=Rv1610 ### -Chromosome ena gene 1810240 1811058 . + . ID=gene:Rv1611;Name=trpC;biotype=protein_coding;description=Probable indole-3-glycerol phosphate synthase TrpC;gene_id=Rv1611;logic_name=ena +Chromosome ena gene 1810240 1811058 . + . ID=gene:Rv1611;Name=trpC;biotype=protein_coding;description=Probable indole-3-glycerol phosphate synthase TrpC;gene_id=Rv1611;logic_name=ena Chromosome ena mRNA 1810240 1811058 . + . ID=transcript:Rv1611;Parent=gene:Rv1611;Name=trpC-1;biotype=protein_coding;transcript_id=Rv1611 Chromosome ena exon 1810240 1811058 . + . Parent=transcript:Rv1611;Name=Rv1611-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1611-1;rank=1 Chromosome ena CDS 1810240 1811058 . + 0 ID=CDS:Rv1611;Parent=transcript:Rv1611;protein_id=Rv1611 ### -Chromosome ena gene 1811127 1812359 . + . ID=gene:Rv1612;Name=trpB;biotype=protein_coding;description=Tryptophan synthase%2C beta subunit TrpB;gene_id=Rv1612;logic_name=ena +Chromosome ena gene 1811127 1812359 . + . ID=gene:Rv1612;Name=trpB;biotype=protein_coding;description=Tryptophan synthase%2C beta subunit TrpB;gene_id=Rv1612;logic_name=ena Chromosome ena mRNA 1811127 1812359 . + . ID=transcript:Rv1612;Parent=gene:Rv1612;Name=trpB-1;biotype=protein_coding;transcript_id=Rv1612 Chromosome ena exon 1811127 1812359 . + . Parent=transcript:Rv1612;Name=Rv1612-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1612-1;rank=1 Chromosome ena CDS 1811127 1812359 . + 0 ID=CDS:Rv1612;Parent=transcript:Rv1612;protein_id=Rv1612 ### -Chromosome ena gene 1812359 1813171 . + . ID=gene:Rv1613;Name=trpA;biotype=protein_coding;description=Probable tryptophan synthase%2C alpha subunit TrpA;gene_id=Rv1613;logic_name=ena +Chromosome ena gene 1812359 1813171 . + . ID=gene:Rv1613;Name=trpA;biotype=protein_coding;description=Probable tryptophan synthase%2C alpha subunit TrpA;gene_id=Rv1613;logic_name=ena Chromosome ena mRNA 1812359 1813171 . + . ID=transcript:Rv1613;Parent=gene:Rv1613;Name=trpA-1;biotype=protein_coding;transcript_id=Rv1613 Chromosome ena exon 1812359 1813171 . + . Parent=transcript:Rv1613;Name=Rv1613-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1613-1;rank=1 Chromosome ena CDS 1812359 1813171 . + 0 ID=CDS:Rv1613;Parent=transcript:Rv1613;protein_id=Rv1613 ### -Chromosome ena gene 1813171 1814577 . + . ID=gene:Rv1614;Name=lgt;biotype=protein_coding;description=Possible prolipoprotein diacylglyceryl transferases Lgt;gene_id=Rv1614;logic_name=ena +Chromosome ena gene 1813171 1814577 . + . ID=gene:Rv1614;Name=lgt;biotype=protein_coding;description=Possible prolipoprotein diacylglyceryl transferases Lgt;gene_id=Rv1614;logic_name=ena Chromosome ena mRNA 1813171 1814577 . + . ID=transcript:Rv1614;Parent=gene:Rv1614;Name=lgt-1;biotype=protein_coding;transcript_id=Rv1614 Chromosome ena exon 1813171 1814577 . + . Parent=transcript:Rv1614;Name=Rv1614-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1614-1;rank=1 Chromosome ena CDS 1813171 1814577 . + 0 ID=CDS:Rv1614;Parent=transcript:Rv1614;protein_id=Rv1614 ### -Chromosome ena gene 1815253 1815693 . + . ID=gene:Rv1615;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1615;logic_name=ena +Chromosome ena gene 1815253 1815693 . + . ID=gene:Rv1615;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1615;logic_name=ena Chromosome ena mRNA 1815253 1815693 . + . ID=transcript:Rv1615;Parent=gene:Rv1615;biotype=protein_coding;transcript_id=Rv1615 Chromosome ena exon 1815253 1815693 . + . Parent=transcript:Rv1615;Name=Rv1615-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1615-1;rank=1 Chromosome ena CDS 1815253 1815693 . + 0 ID=CDS:Rv1615;Parent=transcript:Rv1615;protein_id=Rv1615 ### -Chromosome ena gene 1815683 1816081 . + . ID=gene:Rv1616;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1616;logic_name=ena +Chromosome ena gene 1815683 1816081 . + . ID=gene:Rv1616;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1616;logic_name=ena Chromosome ena mRNA 1815683 1816081 . + . ID=transcript:Rv1616;Parent=gene:Rv1616;biotype=protein_coding;transcript_id=Rv1616 Chromosome ena exon 1815683 1816081 . + . Parent=transcript:Rv1616;Name=Rv1616-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1616-1;rank=1 Chromosome ena CDS 1815683 1816081 . + 0 ID=CDS:Rv1616;Parent=transcript:Rv1616;protein_id=Rv1616 ### -Chromosome ena gene 1816189 1817607 . + . ID=gene:Rv1617;Name=pykA;biotype=protein_coding;description=Probable pyruvate kinase PykA;gene_id=Rv1617;logic_name=ena +Chromosome ena gene 1816189 1817607 . + . ID=gene:Rv1617;Name=pykA;biotype=protein_coding;description=Probable pyruvate kinase PykA;gene_id=Rv1617;logic_name=ena Chromosome ena mRNA 1816189 1817607 . + . ID=transcript:Rv1617;Parent=gene:Rv1617;Name=pykA-1;biotype=protein_coding;transcript_id=Rv1617 Chromosome ena exon 1816189 1817607 . + . Parent=transcript:Rv1617;Name=Rv1617-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1617-1;rank=1 Chromosome ena CDS 1816189 1817607 . + 0 ID=CDS:Rv1617;Parent=transcript:Rv1617;protein_id=Rv1617 ### -Chromosome ena gene 1817615 1818517 . + . ID=gene:Rv1618;Name=tesB1;biotype=protein_coding;description=Probable acyl-CoA thioesterase II TesB1;gene_id=Rv1618;logic_name=ena +Chromosome ena gene 1817615 1818517 . + . ID=gene:Rv1618;Name=tesB1;biotype=protein_coding;description=Probable acyl-CoA thioesterase II TesB1;gene_id=Rv1618;logic_name=ena Chromosome ena mRNA 1817615 1818517 . + . ID=transcript:Rv1618;Parent=gene:Rv1618;Name=tesB1-1;biotype=protein_coding;transcript_id=Rv1618 Chromosome ena exon 1817615 1818517 . + . Parent=transcript:Rv1618;Name=Rv1618-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1618-1;rank=1 Chromosome ena CDS 1817615 1818517 . + 0 ID=CDS:Rv1618;Parent=transcript:Rv1618;protein_id=Rv1618 ### -Chromosome ena gene 1818575 1820029 . + . ID=gene:Rv1619;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1619;logic_name=ena +Chromosome ena gene 1818575 1820029 . + . ID=gene:Rv1619;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv1619;logic_name=ena Chromosome ena mRNA 1818575 1820029 . + . ID=transcript:Rv1619;Parent=gene:Rv1619;biotype=protein_coding;transcript_id=Rv1619 Chromosome ena exon 1818575 1820029 . + . Parent=transcript:Rv1619;Name=Rv1619-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1619-1;rank=1 Chromosome ena CDS 1818575 1820029 . + 0 ID=CDS:Rv1619;Parent=transcript:Rv1619;protein_id=Rv1619 ### -Chromosome ena gene 1819963 1821693 . - . ID=gene:Rv1620c;Name=cydC;biotype=protein_coding;description=Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydC;gene_id=Rv1620c;logic_name=ena +Chromosome ena gene 1819963 1821693 . - . ID=gene:Rv1620c;Name=cydC;biotype=protein_coding;description=Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydC;gene_id=Rv1620c;logic_name=ena Chromosome ena mRNA 1819963 1821693 . - . ID=transcript:Rv1620c;Parent=gene:Rv1620c;Name=cydC-1;biotype=protein_coding;transcript_id=Rv1620c Chromosome ena exon 1819963 1821693 . - . Parent=transcript:Rv1620c;Name=Rv1620c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1620c-1;rank=1 Chromosome ena CDS 1819963 1821693 . - 0 ID=CDS:Rv1620c;Parent=transcript:Rv1620c;protein_id=Rv1620c ### -Chromosome ena gene 1821690 1823273 . - . ID=gene:Rv1621c;Name=cydD;biotype=protein_coding;description=Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydD;gene_id=Rv1621c;logic_name=ena +Chromosome ena gene 1821690 1823273 . - . ID=gene:Rv1621c;Name=cydD;biotype=protein_coding;description=Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydD;gene_id=Rv1621c;logic_name=ena Chromosome ena mRNA 1821690 1823273 . - . ID=transcript:Rv1621c;Parent=gene:Rv1621c;Name=cydD-1;biotype=protein_coding;transcript_id=Rv1621c Chromosome ena exon 1821690 1823273 . - . Parent=transcript:Rv1621c;Name=Rv1621c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1621c-1;rank=1 Chromosome ena CDS 1821690 1823273 . - 0 ID=CDS:Rv1621c;Parent=transcript:Rv1621c;protein_id=Rv1621c ### -Chromosome ena gene 1823360 1824400 . - . ID=gene:Rv1622c;Name=cydB;biotype=protein_coding;description=Probable integral membrane cytochrome D ubiquinol oxidase (subunit II) CydB (cytochrome BD-I oxidase subunit II);gene_id=Rv1622c;logic_name=ena +Chromosome ena gene 1823360 1824400 . - . ID=gene:Rv1622c;Name=cydB;biotype=protein_coding;description=Probable integral membrane cytochrome D ubiquinol oxidase (subunit II) CydB (cytochrome BD-I oxidase subunit II);gene_id=Rv1622c;logic_name=ena Chromosome ena mRNA 1823360 1824400 . - . ID=transcript:Rv1622c;Parent=gene:Rv1622c;Name=cydB-1;biotype=protein_coding;transcript_id=Rv1622c Chromosome ena exon 1823360 1824400 . - . Parent=transcript:Rv1622c;Name=Rv1622c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1622c-1;rank=1 Chromosome ena CDS 1823360 1824400 . - 0 ID=CDS:Rv1622c;Parent=transcript:Rv1622c;protein_id=Rv1622c ### -Chromosome ena gene 1824430 1825887 . - . ID=gene:Rv1623c;Name=cydA;biotype=protein_coding;description=Probable integral membrane cytochrome D ubiquinol oxidase (subunit I) CydA (cytochrome BD-I oxidase subunit I);gene_id=Rv1623c;logic_name=ena +Chromosome ena gene 1824430 1825887 . - . ID=gene:Rv1623c;Name=cydA;biotype=protein_coding;description=Probable integral membrane cytochrome D ubiquinol oxidase (subunit I) CydA (cytochrome BD-I oxidase subunit I);gene_id=Rv1623c;logic_name=ena Chromosome ena mRNA 1824430 1825887 . - . ID=transcript:Rv1623c;Parent=gene:Rv1623c;Name=cydA-1;biotype=protein_coding;transcript_id=Rv1623c Chromosome ena exon 1824430 1825887 . - . Parent=transcript:Rv1623c;Name=Rv1623c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1623c-1;rank=1 Chromosome ena CDS 1824430 1825887 . - 0 ID=CDS:Rv1623c;Parent=transcript:Rv1623c;protein_id=Rv1623c ### -Chromosome ena gene 1825998 1826585 . - . ID=gene:Rv1624c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1624c;logic_name=ena +Chromosome ena gene 1825998 1826585 . - . ID=gene:Rv1624c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1624c;logic_name=ena Chromosome ena mRNA 1825998 1826585 . - . ID=transcript:Rv1624c;Parent=gene:Rv1624c;biotype=protein_coding;transcript_id=Rv1624c Chromosome ena exon 1825998 1826585 . - . Parent=transcript:Rv1624c;Name=Rv1624c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1624c-1;rank=1 Chromosome ena CDS 1825998 1826585 . - 0 ID=CDS:Rv1624c;Parent=transcript:Rv1624c;protein_id=Rv1624c ### -Chromosome ena gene 1826614 1827945 . - . ID=gene:Rv1625c;Name=cya;biotype=protein_coding;description=Membrane-anchored adenylyl cyclase Cya (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv1625c;logic_name=ena +Chromosome ena gene 1826614 1827945 . - . ID=gene:Rv1625c;Name=cya;biotype=protein_coding;description=Membrane-anchored adenylyl cyclase Cya (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv1625c;logic_name=ena Chromosome ena mRNA 1826614 1827945 . - . ID=transcript:Rv1625c;Parent=gene:Rv1625c;Name=cya-1;biotype=protein_coding;transcript_id=Rv1625c Chromosome ena exon 1826614 1827945 . - . Parent=transcript:Rv1625c;Name=Rv1625c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1625c-1;rank=1 Chromosome ena CDS 1826614 1827945 . - 0 ID=CDS:Rv1625c;Parent=transcript:Rv1625c;protein_id=Rv1625c @@ -8534,327 +8534,327 @@ Chromosome ena transcript 1828015 1828088 . - . ID=transcript:EBG00000313382;Par Chromosome ena exon 1828015 1828088 . - . Parent=transcript:EBG00000313382;Name=EBG00000313382;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313382;rank=1 ### Chromosome ena_gene biological_region 1828015 1828088 . - . external_name=AL123456.3:gene:complement(1828015..1828088);logic_name=ena_gene -Chromosome ena gene 1828180 1828797 . + . ID=gene:Rv1626;biotype=protein_coding;description=Probable two-component system transcriptional regulator;gene_id=Rv1626;logic_name=ena +Chromosome ena gene 1828180 1828797 . + . ID=gene:Rv1626;biotype=protein_coding;description=Probable two-component system transcriptional regulator;gene_id=Rv1626;logic_name=ena Chromosome ena mRNA 1828180 1828797 . + . ID=transcript:Rv1626;Parent=gene:Rv1626;biotype=protein_coding;transcript_id=Rv1626 Chromosome ena exon 1828180 1828797 . + . Parent=transcript:Rv1626;Name=Rv1626-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1626-1;rank=1 Chromosome ena CDS 1828180 1828797 . + 0 ID=CDS:Rv1626;Parent=transcript:Rv1626;protein_id=Rv1626 ### -Chromosome ena gene 1828865 1830073 . - . ID=gene:Rv1627c;biotype=protein_coding;description=Probable nonspecific lipid-transfer protein;gene_id=Rv1627c;logic_name=ena +Chromosome ena gene 1828865 1830073 . - . ID=gene:Rv1627c;biotype=protein_coding;description=Probable nonspecific lipid-transfer protein;gene_id=Rv1627c;logic_name=ena Chromosome ena mRNA 1828865 1830073 . - . ID=transcript:Rv1627c;Parent=gene:Rv1627c;biotype=protein_coding;transcript_id=Rv1627c Chromosome ena exon 1828865 1830073 . - . Parent=transcript:Rv1627c;Name=Rv1627c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1627c-1;rank=1 Chromosome ena CDS 1828865 1830073 . - 0 ID=CDS:Rv1627c;Parent=transcript:Rv1627c;protein_id=Rv1627c ### -Chromosome ena gene 1830070 1830561 . - . ID=gene:Rv1628c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1628c;logic_name=ena +Chromosome ena gene 1830070 1830561 . - . ID=gene:Rv1628c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1628c;logic_name=ena Chromosome ena mRNA 1830070 1830561 . - . ID=transcript:Rv1628c;Parent=gene:Rv1628c;biotype=protein_coding;transcript_id=Rv1628c Chromosome ena exon 1830070 1830561 . - . Parent=transcript:Rv1628c;Name=Rv1628c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1628c-1;rank=1 Chromosome ena CDS 1830070 1830561 . - 0 ID=CDS:Rv1628c;Parent=transcript:Rv1628c;protein_id=Rv1628c ### -Chromosome ena gene 1830665 1833379 . + . ID=gene:Rv1629;Name=polA;biotype=protein_coding;description=Probable DNA polymerase I PolA;gene_id=Rv1629;logic_name=ena +Chromosome ena gene 1830665 1833379 . + . ID=gene:Rv1629;Name=polA;biotype=protein_coding;description=Probable DNA polymerase I PolA;gene_id=Rv1629;logic_name=ena Chromosome ena mRNA 1830665 1833379 . + . ID=transcript:Rv1629;Parent=gene:Rv1629;Name=polA-1;biotype=protein_coding;transcript_id=Rv1629 Chromosome ena exon 1830665 1833379 . + . Parent=transcript:Rv1629;Name=Rv1629-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1629-1;rank=1 Chromosome ena CDS 1830665 1833379 . + 0 ID=CDS:Rv1629;Parent=transcript:Rv1629;protein_id=Rv1629 ### -Chromosome ena gene 1833542 1834987 . + . ID=gene:Rv1630;Name=rpsA;biotype=protein_coding;description=30S ribosomal protein S1 RpsA;gene_id=Rv1630;logic_name=ena +Chromosome ena gene 1833542 1834987 . + . ID=gene:Rv1630;Name=rpsA;biotype=protein_coding;description=30S ribosomal protein S1 RpsA;gene_id=Rv1630;logic_name=ena Chromosome ena mRNA 1833542 1834987 . + . ID=transcript:Rv1630;Parent=gene:Rv1630;Name=rpsA-1;biotype=protein_coding;transcript_id=Rv1630 Chromosome ena exon 1833542 1834987 . + . Parent=transcript:Rv1630;Name=Rv1630-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1630-1;rank=1 Chromosome ena CDS 1833542 1834987 . + 0 ID=CDS:Rv1630;Parent=transcript:Rv1630;protein_id=Rv1630 ### -Chromosome ena gene 1835013 1836236 . + . ID=gene:Rv1631;Name=coaE;biotype=protein_coding;description=Probable dephospho-CoA kinase CoaE (dephosphocoenzyme a kinase);gene_id=Rv1631;logic_name=ena +Chromosome ena gene 1835013 1836236 . + . ID=gene:Rv1631;Name=coaE;biotype=protein_coding;description=Probable dephospho-CoA kinase CoaE (dephosphocoenzyme a kinase);gene_id=Rv1631;logic_name=ena Chromosome ena mRNA 1835013 1836236 . + . ID=transcript:Rv1631;Parent=gene:Rv1631;Name=coaE-1;biotype=protein_coding;transcript_id=Rv1631 Chromosome ena exon 1835013 1836236 . + . Parent=transcript:Rv1631;Name=Rv1631-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1631-1;rank=1 Chromosome ena CDS 1835013 1836236 . + 0 ID=CDS:Rv1631;Parent=transcript:Rv1631;protein_id=Rv1631 ### -Chromosome ena gene 1836387 1836830 . - . ID=gene:Rv1632c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1632c;logic_name=ena +Chromosome ena gene 1836387 1836830 . - . ID=gene:Rv1632c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1632c;logic_name=ena Chromosome ena mRNA 1836387 1836830 . - . ID=transcript:Rv1632c;Parent=gene:Rv1632c;biotype=protein_coding;transcript_id=Rv1632c Chromosome ena exon 1836387 1836830 . - . Parent=transcript:Rv1632c;Name=Rv1632c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1632c-1;rank=1 Chromosome ena CDS 1836387 1836830 . - 0 ID=CDS:Rv1632c;Parent=transcript:Rv1632c;protein_id=Rv1632c ### -Chromosome ena gene 1837075 1839171 . + . ID=gene:Rv1633;Name=uvrB;biotype=protein_coding;description=Probable excinuclease ABC (subunit B-helicase) UvrB;gene_id=Rv1633;logic_name=ena +Chromosome ena gene 1837075 1839171 . + . ID=gene:Rv1633;Name=uvrB;biotype=protein_coding;description=Probable excinuclease ABC (subunit B-helicase) UvrB;gene_id=Rv1633;logic_name=ena Chromosome ena mRNA 1837075 1839171 . + . ID=transcript:Rv1633;Parent=gene:Rv1633;Name=uvrB-1;biotype=protein_coding;transcript_id=Rv1633 Chromosome ena exon 1837075 1839171 . + . Parent=transcript:Rv1633;Name=Rv1633-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1633-1;rank=1 Chromosome ena CDS 1837075 1839171 . + 0 ID=CDS:Rv1633;Parent=transcript:Rv1633;protein_id=Rv1633 ### -Chromosome ena gene 1839168 1840583 . + . ID=gene:Rv1634;biotype=protein_coding;description=Possible drug efflux membrane protein;gene_id=Rv1634;logic_name=ena +Chromosome ena gene 1839168 1840583 . + . ID=gene:Rv1634;biotype=protein_coding;description=Possible drug efflux membrane protein;gene_id=Rv1634;logic_name=ena Chromosome ena mRNA 1839168 1840583 . + . ID=transcript:Rv1634;Parent=gene:Rv1634;biotype=protein_coding;transcript_id=Rv1634 Chromosome ena exon 1839168 1840583 . + . Parent=transcript:Rv1634;Name=Rv1634-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1634-1;rank=1 Chromosome ena CDS 1839168 1840583 . + 0 ID=CDS:Rv1634;Parent=transcript:Rv1634;protein_id=Rv1634 ### -Chromosome ena gene 1840572 1842242 . - . ID=gene:Rv1635c;biotype=protein_coding;description=Probable mannosyltransferase. Probable conserved transmembrane protein.;gene_id=Rv1635c;logic_name=ena +Chromosome ena gene 1840572 1842242 . - . ID=gene:Rv1635c;biotype=protein_coding;description=Probable mannosyltransferase. Probable conserved transmembrane protein.;gene_id=Rv1635c;logic_name=ena Chromosome ena mRNA 1840572 1842242 . - . ID=transcript:Rv1635c;Parent=gene:Rv1635c;biotype=protein_coding;transcript_id=Rv1635c Chromosome ena exon 1840572 1842242 . - . Parent=transcript:Rv1635c;Name=Rv1635c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1635c-1;rank=1 Chromosome ena CDS 1840572 1842242 . - 0 ID=CDS:Rv1635c;Parent=transcript:Rv1635c;protein_id=Rv1635c ### -Chromosome ena gene 1842451 1842891 . + . ID=gene:Rv1636;Name=TB15.3;biotype=protein_coding;description=Iron-regulated universal stress protein family protein TB15.3;gene_id=Rv1636;logic_name=ena +Chromosome ena gene 1842451 1842891 . + . ID=gene:Rv1636;Name=TB15.3;biotype=protein_coding;description=Iron-regulated universal stress protein family protein TB15.3;gene_id=Rv1636;logic_name=ena Chromosome ena mRNA 1842451 1842891 . + . ID=transcript:Rv1636;Parent=gene:Rv1636;Name=TB15.3-1;biotype=protein_coding;transcript_id=Rv1636 Chromosome ena exon 1842451 1842891 . + . Parent=transcript:Rv1636;Name=Rv1636-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1636-1;rank=1 Chromosome ena CDS 1842451 1842891 . + 0 ID=CDS:Rv1636;Parent=transcript:Rv1636;protein_id=Rv1636 ### -Chromosome ena gene 1842898 1843692 . - . ID=gene:Rv1637c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1637c;logic_name=ena +Chromosome ena gene 1842898 1843692 . - . ID=gene:Rv1637c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1637c;logic_name=ena Chromosome ena mRNA 1842898 1843692 . - . ID=transcript:Rv1637c;Parent=gene:Rv1637c;biotype=protein_coding;transcript_id=Rv1637c Chromosome ena exon 1842898 1843692 . - . Parent=transcript:Rv1637c;Name=Rv1637c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1637c-1;rank=1 Chromosome ena CDS 1842898 1843692 . - 0 ID=CDS:Rv1637c;Parent=transcript:Rv1637c;protein_id=Rv1637c ### -Chromosome ena gene 1843741 1846659 . + . ID=gene:Rv1638;Name=uvrA;biotype=protein_coding;description=Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA;gene_id=Rv1638;logic_name=ena +Chromosome ena gene 1843741 1846659 . + . ID=gene:Rv1638;Name=uvrA;biotype=protein_coding;description=Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA;gene_id=Rv1638;logic_name=ena Chromosome ena mRNA 1843741 1846659 . + . ID=transcript:Rv1638;Parent=gene:Rv1638;Name=uvrA-1;biotype=protein_coding;transcript_id=Rv1638 Chromosome ena exon 1843741 1846659 . + . Parent=transcript:Rv1638;Name=Rv1638-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1638-1;rank=1 Chromosome ena CDS 1843741 1846659 . + 0 ID=CDS:Rv1638;Parent=transcript:Rv1638;protein_id=Rv1638 ### -Chromosome ena gene 1846716 1846973 . - . ID=gene:Rv1638A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1638A;logic_name=ena +Chromosome ena gene 1846716 1846973 . - . ID=gene:Rv1638A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1638A;logic_name=ena Chromosome ena mRNA 1846716 1846973 . - . ID=transcript:Rv1638A;Parent=gene:Rv1638A;biotype=protein_coding;transcript_id=Rv1638A Chromosome ena exon 1846716 1846973 . - . Parent=transcript:Rv1638A;Name=Rv1638A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1638A-1;rank=1 Chromosome ena CDS 1846716 1846973 . - 0 ID=CDS:Rv1638A;Parent=transcript:Rv1638A;protein_id=Rv1638A ### -Chromosome ena gene 1846989 1848458 . - . ID=gene:Rv1639c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1639c;logic_name=ena +Chromosome ena gene 1846989 1848458 . - . ID=gene:Rv1639c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1639c;logic_name=ena Chromosome ena mRNA 1846989 1848458 . - . ID=transcript:Rv1639c;Parent=gene:Rv1639c;biotype=protein_coding;transcript_id=Rv1639c Chromosome ena exon 1846989 1848458 . - . Parent=transcript:Rv1639c;Name=Rv1639c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1639c-1;rank=1 Chromosome ena CDS 1846989 1848458 . - 0 ID=CDS:Rv1639c;Parent=transcript:Rv1639c;protein_id=Rv1639c ### -Chromosome ena gene 1848517 1852035 . - . ID=gene:Rv1640c;Name=lysX;biotype=protein_coding;description=Lysyl-tRNA synthetase 2 LysX;gene_id=Rv1640c;logic_name=ena +Chromosome ena gene 1848517 1852035 . - . ID=gene:Rv1640c;Name=lysX;biotype=protein_coding;description=Lysyl-tRNA synthetase 2 LysX;gene_id=Rv1640c;logic_name=ena Chromosome ena mRNA 1848517 1852035 . - . ID=transcript:Rv1640c;Parent=gene:Rv1640c;Name=lysX-1;biotype=protein_coding;transcript_id=Rv1640c Chromosome ena exon 1848517 1852035 . - . Parent=transcript:Rv1640c;Name=Rv1640c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1640c-1;rank=1 Chromosome ena CDS 1848517 1852035 . - 0 ID=CDS:Rv1640c;Parent=transcript:Rv1640c;protein_id=Rv1640c ### -Chromosome ena gene 1852273 1852878 . + . ID=gene:Rv1641;Name=infC;biotype=protein_coding;description=Probable initiation factor if-3 InfC;gene_id=Rv1641;logic_name=ena +Chromosome ena gene 1852273 1852878 . + . ID=gene:Rv1641;Name=infC;biotype=protein_coding;description=Probable initiation factor if-3 InfC;gene_id=Rv1641;logic_name=ena Chromosome ena mRNA 1852273 1852878 . + . ID=transcript:Rv1641;Parent=gene:Rv1641;Name=infC-1;biotype=protein_coding;transcript_id=Rv1641 Chromosome ena exon 1852273 1852878 . + . Parent=transcript:Rv1641;Name=Rv1641-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1641-1;rank=1 Chromosome ena CDS 1852273 1852878 . + 0 ID=CDS:Rv1641;Parent=transcript:Rv1641;protein_id=Rv1641 ### -Chromosome ena gene 1852928 1853122 . + . ID=gene:Rv1642;Name=rpmI;biotype=protein_coding;description=50S ribosomal protein L35 RpmI;gene_id=Rv1642;logic_name=ena +Chromosome ena gene 1852928 1853122 . + . ID=gene:Rv1642;Name=rpmI;biotype=protein_coding;description=50S ribosomal protein L35 RpmI;gene_id=Rv1642;logic_name=ena Chromosome ena mRNA 1852928 1853122 . + . ID=transcript:Rv1642;Parent=gene:Rv1642;Name=rpmI-1;biotype=protein_coding;transcript_id=Rv1642 Chromosome ena exon 1852928 1853122 . + . Parent=transcript:Rv1642;Name=Rv1642-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1642-1;rank=1 Chromosome ena CDS 1852928 1853122 . + 0 ID=CDS:Rv1642;Parent=transcript:Rv1642;protein_id=Rv1642 ### -Chromosome ena gene 1853184 1853573 . + . ID=gene:Rv1643;Name=rplT;biotype=protein_coding;description=50S ribosomal protein L20 RplT;gene_id=Rv1643;logic_name=ena +Chromosome ena gene 1853184 1853573 . + . ID=gene:Rv1643;Name=rplT;biotype=protein_coding;description=50S ribosomal protein L20 RplT;gene_id=Rv1643;logic_name=ena Chromosome ena mRNA 1853184 1853573 . + . ID=transcript:Rv1643;Parent=gene:Rv1643;Name=rplT-1;biotype=protein_coding;transcript_id=Rv1643 Chromosome ena exon 1853184 1853573 . + . Parent=transcript:Rv1643;Name=Rv1643-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1643-1;rank=1 Chromosome ena CDS 1853184 1853573 . + 0 ID=CDS:Rv1643;Parent=transcript:Rv1643;protein_id=Rv1643 ### -Chromosome ena gene 1853606 1854388 . + . ID=gene:Rv1644;Name=tsnR;biotype=protein_coding;description=Possible 23S rRNA methyltransferase TsnR;gene_id=Rv1644;logic_name=ena +Chromosome ena gene 1853606 1854388 . + . ID=gene:Rv1644;Name=tsnR;biotype=protein_coding;description=Possible 23S rRNA methyltransferase TsnR;gene_id=Rv1644;logic_name=ena Chromosome ena mRNA 1853606 1854388 . + . ID=transcript:Rv1644;Parent=gene:Rv1644;Name=tsnR-1;biotype=protein_coding;transcript_id=Rv1644 Chromosome ena exon 1853606 1854388 . + . Parent=transcript:Rv1644;Name=Rv1644-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1644-1;rank=1 Chromosome ena CDS 1853606 1854388 . + 0 ID=CDS:Rv1644;Parent=transcript:Rv1644;protein_id=Rv1644 ### -Chromosome ena gene 1854399 1855454 . - . ID=gene:Rv1645c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1645c;logic_name=ena +Chromosome ena gene 1854399 1855454 . - . ID=gene:Rv1645c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1645c;logic_name=ena Chromosome ena mRNA 1854399 1855454 . - . ID=transcript:Rv1645c;Parent=gene:Rv1645c;biotype=protein_coding;transcript_id=Rv1645c Chromosome ena exon 1854399 1855454 . - . Parent=transcript:Rv1645c;Name=Rv1645c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1645c-1;rank=1 Chromosome ena CDS 1854399 1855454 . - 0 ID=CDS:Rv1645c;Parent=transcript:Rv1645c;protein_id=Rv1645c ### -Chromosome ena gene 1855764 1856696 . + . ID=gene:Rv1646;Name=PE17;biotype=protein_coding;description=PE family protein PE17;gene_id=Rv1646;logic_name=ena +Chromosome ena gene 1855764 1856696 . + . ID=gene:Rv1646;Name=PE17;biotype=protein_coding;description=PE family protein PE17;gene_id=Rv1646;logic_name=ena Chromosome ena mRNA 1855764 1856696 . + . ID=transcript:Rv1646;Parent=gene:Rv1646;Name=PE17-1;biotype=protein_coding;transcript_id=Rv1646 Chromosome ena exon 1855764 1856696 . + . Parent=transcript:Rv1646;Name=Rv1646-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1646-1;rank=1 Chromosome ena CDS 1855764 1856696 . + 0 ID=CDS:Rv1646;Parent=transcript:Rv1646;protein_id=Rv1646 ### -Chromosome ena gene 1856774 1857724 . + . ID=gene:Rv1647;biotype=protein_coding;description=Adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1647;logic_name=ena +Chromosome ena gene 1856774 1857724 . + . ID=gene:Rv1647;biotype=protein_coding;description=Adenylate cyclase (ATP pyrophosphate-lyase) (adenylyl cyclase);gene_id=Rv1647;logic_name=ena Chromosome ena mRNA 1856774 1857724 . + . ID=transcript:Rv1647;Parent=gene:Rv1647;biotype=protein_coding;transcript_id=Rv1647 Chromosome ena exon 1856774 1857724 . + . Parent=transcript:Rv1647;Name=Rv1647-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1647-1;rank=1 Chromosome ena CDS 1856774 1857724 . + 0 ID=CDS:Rv1647;Parent=transcript:Rv1647;protein_id=Rv1647 ### -Chromosome ena gene 1857731 1858537 . + . ID=gene:Rv1648;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1648;logic_name=ena +Chromosome ena gene 1857731 1858537 . + . ID=gene:Rv1648;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv1648;logic_name=ena Chromosome ena mRNA 1857731 1858537 . + . ID=transcript:Rv1648;Parent=gene:Rv1648;biotype=protein_coding;transcript_id=Rv1648 Chromosome ena exon 1857731 1858537 . + . Parent=transcript:Rv1648;Name=Rv1648-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1648-1;rank=1 Chromosome ena CDS 1857731 1858537 . + 0 ID=CDS:Rv1648;Parent=transcript:Rv1648;protein_id=Rv1648 ### -Chromosome ena gene 1858733 1859758 . + . ID=gene:Rv1649;Name=pheS;biotype=protein_coding;description=Probable phenylalanyl-tRNA synthetase%2C alpha chain PheS;gene_id=Rv1649;logic_name=ena +Chromosome ena gene 1858733 1859758 . + . ID=gene:Rv1649;Name=pheS;biotype=protein_coding;description=Probable phenylalanyl-tRNA synthetase%2C alpha chain PheS;gene_id=Rv1649;logic_name=ena Chromosome ena mRNA 1858733 1859758 . + . ID=transcript:Rv1649;Parent=gene:Rv1649;Name=pheS-1;biotype=protein_coding;transcript_id=Rv1649 Chromosome ena exon 1858733 1859758 . + . Parent=transcript:Rv1649;Name=Rv1649-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1649-1;rank=1 Chromosome ena CDS 1858733 1859758 . + 0 ID=CDS:Rv1649;Parent=transcript:Rv1649;protein_id=Rv1649 ### -Chromosome ena gene 1859758 1862253 . + . ID=gene:Rv1650;Name=pheT;biotype=protein_coding;description=Probable phenylalanyl-tRNA synthetase%2C beta chain PheT;gene_id=Rv1650;logic_name=ena +Chromosome ena gene 1859758 1862253 . + . ID=gene:Rv1650;Name=pheT;biotype=protein_coding;description=Probable phenylalanyl-tRNA synthetase%2C beta chain PheT;gene_id=Rv1650;logic_name=ena Chromosome ena mRNA 1859758 1862253 . + . ID=transcript:Rv1650;Parent=gene:Rv1650;Name=pheT-1;biotype=protein_coding;transcript_id=Rv1650 Chromosome ena exon 1859758 1862253 . + . Parent=transcript:Rv1650;Name=Rv1650-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1650-1;rank=1 Chromosome ena CDS 1859758 1862253 . + 0 ID=CDS:Rv1650;Parent=transcript:Rv1650;protein_id=Rv1650 ### -Chromosome ena gene 1862347 1865382 . - . ID=gene:Rv1651c;Name=PE_PGRS30;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS30;gene_id=Rv1651c;logic_name=ena +Chromosome ena gene 1862347 1865382 . - . ID=gene:Rv1651c;Name=PE_PGRS30;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS30;gene_id=Rv1651c;logic_name=ena Chromosome ena mRNA 1862347 1865382 . - . ID=transcript:Rv1651c;Parent=gene:Rv1651c;Name=PE_PGRS30-1;biotype=protein_coding;transcript_id=Rv1651c Chromosome ena exon 1862347 1865382 . - . Parent=transcript:Rv1651c;Name=Rv1651c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1651c-1;rank=1 Chromosome ena CDS 1862347 1865382 . - 0 ID=CDS:Rv1651c;Parent=transcript:Rv1651c;protein_id=Rv1651c ### -Chromosome ena gene 1865576 1866634 . + . ID=gene:Rv1652;Name=argC;biotype=protein_coding;description=Probable N-acetyl-gamma-glutamyl-phoshate reductase ArgC;gene_id=Rv1652;logic_name=ena +Chromosome ena gene 1865576 1866634 . + . ID=gene:Rv1652;Name=argC;biotype=protein_coding;description=Probable N-acetyl-gamma-glutamyl-phoshate reductase ArgC;gene_id=Rv1652;logic_name=ena Chromosome ena mRNA 1865576 1866634 . + . ID=transcript:Rv1652;Parent=gene:Rv1652;Name=argC-1;biotype=protein_coding;transcript_id=Rv1652 Chromosome ena exon 1865576 1866634 . + . Parent=transcript:Rv1652;Name=Rv1652-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1652-1;rank=1 Chromosome ena CDS 1865576 1866634 . + 0 ID=CDS:Rv1652;Parent=transcript:Rv1652;protein_id=Rv1652 ### -Chromosome ena gene 1866631 1867845 . + . ID=gene:Rv1653;Name=argJ;biotype=protein_coding;description=Probable glutamate N-acetyltransferase ArgJ;gene_id=Rv1653;logic_name=ena +Chromosome ena gene 1866631 1867845 . + . ID=gene:Rv1653;Name=argJ;biotype=protein_coding;description=Probable glutamate N-acetyltransferase ArgJ;gene_id=Rv1653;logic_name=ena Chromosome ena mRNA 1866631 1867845 . + . ID=transcript:Rv1653;Parent=gene:Rv1653;Name=argJ-1;biotype=protein_coding;transcript_id=Rv1653 Chromosome ena exon 1866631 1867845 . + . Parent=transcript:Rv1653;Name=Rv1653-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1653-1;rank=1 Chromosome ena CDS 1866631 1867845 . + 0 ID=CDS:Rv1653;Parent=transcript:Rv1653;protein_id=Rv1653 ### -Chromosome ena gene 1867842 1868726 . + . ID=gene:Rv1654;Name=argB;biotype=protein_coding;description=Probable acetylglutamate kinase ArgB;gene_id=Rv1654;logic_name=ena +Chromosome ena gene 1867842 1868726 . + . ID=gene:Rv1654;Name=argB;biotype=protein_coding;description=Probable acetylglutamate kinase ArgB;gene_id=Rv1654;logic_name=ena Chromosome ena mRNA 1867842 1868726 . + . ID=transcript:Rv1654;Parent=gene:Rv1654;Name=argB-1;biotype=protein_coding;transcript_id=Rv1654 Chromosome ena exon 1867842 1868726 . + . Parent=transcript:Rv1654;Name=Rv1654-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1654-1;rank=1 Chromosome ena CDS 1867842 1868726 . + 0 ID=CDS:Rv1654;Parent=transcript:Rv1654;protein_id=Rv1654 ### -Chromosome ena gene 1868723 1869925 . + . ID=gene:Rv1655;Name=argD;biotype=protein_coding;description=Probable acetylornithine aminotransferase ArgD;gene_id=Rv1655;logic_name=ena +Chromosome ena gene 1868723 1869925 . + . ID=gene:Rv1655;Name=argD;biotype=protein_coding;description=Probable acetylornithine aminotransferase ArgD;gene_id=Rv1655;logic_name=ena Chromosome ena mRNA 1868723 1869925 . + . ID=transcript:Rv1655;Parent=gene:Rv1655;Name=argD-1;biotype=protein_coding;transcript_id=Rv1655 Chromosome ena exon 1868723 1869925 . + . Parent=transcript:Rv1655;Name=Rv1655-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1655-1;rank=1 Chromosome ena CDS 1868723 1869925 . + 0 ID=CDS:Rv1655;Parent=transcript:Rv1655;protein_id=Rv1655 ### -Chromosome ena gene 1869922 1870845 . + . ID=gene:Rv1656;Name=argF;biotype=protein_coding;description=Probable ornithine carbamoyltransferase%2C anabolic ArgF;gene_id=Rv1656;logic_name=ena +Chromosome ena gene 1869922 1870845 . + . ID=gene:Rv1656;Name=argF;biotype=protein_coding;description=Probable ornithine carbamoyltransferase%2C anabolic ArgF;gene_id=Rv1656;logic_name=ena Chromosome ena mRNA 1869922 1870845 . + . ID=transcript:Rv1656;Parent=gene:Rv1656;Name=argF-1;biotype=protein_coding;transcript_id=Rv1656 Chromosome ena exon 1869922 1870845 . + . Parent=transcript:Rv1656;Name=Rv1656-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1656-1;rank=1 Chromosome ena CDS 1869922 1870845 . + 0 ID=CDS:Rv1656;Parent=transcript:Rv1656;protein_id=Rv1656 ### -Chromosome ena gene 1870842 1871354 . + . ID=gene:Rv1657;Name=argR;biotype=protein_coding;description=Probable arginine repressor ArgR (AHRC);gene_id=Rv1657;logic_name=ena +Chromosome ena gene 1870842 1871354 . + . ID=gene:Rv1657;Name=argR;biotype=protein_coding;description=Probable arginine repressor ArgR (AHRC);gene_id=Rv1657;logic_name=ena Chromosome ena mRNA 1870842 1871354 . + . ID=transcript:Rv1657;Parent=gene:Rv1657;Name=argR-1;biotype=protein_coding;transcript_id=Rv1657 Chromosome ena exon 1870842 1871354 . + . Parent=transcript:Rv1657;Name=Rv1657-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1657-1;rank=1 Chromosome ena CDS 1870842 1871354 . + 0 ID=CDS:Rv1657;Parent=transcript:Rv1657;protein_id=Rv1657 ### -Chromosome ena gene 1871363 1872559 . + . ID=gene:Rv1658;Name=argG;biotype=protein_coding;description=Probable argininosuccinate synthase ArgG;gene_id=Rv1658;logic_name=ena +Chromosome ena gene 1871363 1872559 . + . ID=gene:Rv1658;Name=argG;biotype=protein_coding;description=Probable argininosuccinate synthase ArgG;gene_id=Rv1658;logic_name=ena Chromosome ena mRNA 1871363 1872559 . + . ID=transcript:Rv1658;Parent=gene:Rv1658;Name=argG-1;biotype=protein_coding;transcript_id=Rv1658 Chromosome ena exon 1871363 1872559 . + . Parent=transcript:Rv1658;Name=Rv1658-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1658-1;rank=1 Chromosome ena CDS 1871363 1872559 . + 0 ID=CDS:Rv1658;Parent=transcript:Rv1658;protein_id=Rv1658 ### -Chromosome ena gene 1872639 1874051 . + . ID=gene:Rv1659;Name=argH;biotype=protein_coding;description=Probable argininosuccinate lyase ArgH;gene_id=Rv1659;logic_name=ena +Chromosome ena gene 1872639 1874051 . + . ID=gene:Rv1659;Name=argH;biotype=protein_coding;description=Probable argininosuccinate lyase ArgH;gene_id=Rv1659;logic_name=ena Chromosome ena mRNA 1872639 1874051 . + . ID=transcript:Rv1659;Parent=gene:Rv1659;Name=argH-1;biotype=protein_coding;transcript_id=Rv1659 Chromosome ena exon 1872639 1874051 . + . Parent=transcript:Rv1659;Name=Rv1659-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1659-1;rank=1 Chromosome ena CDS 1872639 1874051 . + 0 ID=CDS:Rv1659;Parent=transcript:Rv1659;protein_id=Rv1659 ### -Chromosome ena gene 1874160 1875221 . + . ID=gene:Rv1660;Name=pks10;biotype=protein_coding;description=Chalcone synthase Pks10;gene_id=Rv1660;logic_name=ena +Chromosome ena gene 1874160 1875221 . + . ID=gene:Rv1660;Name=pks10;biotype=protein_coding;description=Chalcone synthase Pks10;gene_id=Rv1660;logic_name=ena Chromosome ena mRNA 1874160 1875221 . + . ID=transcript:Rv1660;Parent=gene:Rv1660;Name=pks10-1;biotype=protein_coding;transcript_id=Rv1660 Chromosome ena exon 1874160 1875221 . + . Parent=transcript:Rv1660;Name=Rv1660-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1660-1;rank=1 Chromosome ena CDS 1874160 1875221 . + 0 ID=CDS:Rv1660;Parent=transcript:Rv1660;protein_id=Rv1660 ### -Chromosome ena gene 1875304 1881684 . + . ID=gene:Rv1661;Name=pks7;biotype=protein_coding;description=Probable polyketide synthase Pks7;gene_id=Rv1661;logic_name=ena +Chromosome ena gene 1875304 1881684 . + . ID=gene:Rv1661;Name=pks7;biotype=protein_coding;description=Probable polyketide synthase Pks7;gene_id=Rv1661;logic_name=ena Chromosome ena mRNA 1875304 1881684 . + . ID=transcript:Rv1661;Parent=gene:Rv1661;Name=pks7-1;biotype=protein_coding;transcript_id=Rv1661 Chromosome ena exon 1875304 1881684 . + . Parent=transcript:Rv1661;Name=Rv1661-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1661-1;rank=1 Chromosome ena CDS 1875304 1881684 . + 0 ID=CDS:Rv1661;Parent=transcript:Rv1661;protein_id=Rv1661 ### -Chromosome ena gene 1881704 1886512 . + . ID=gene:Rv1662;Name=pks8;biotype=protein_coding;description=Probable polyketide synthase Pks8;gene_id=Rv1662;logic_name=ena +Chromosome ena gene 1881704 1886512 . + . ID=gene:Rv1662;Name=pks8;biotype=protein_coding;description=Probable polyketide synthase Pks8;gene_id=Rv1662;logic_name=ena Chromosome ena mRNA 1881704 1886512 . + . ID=transcript:Rv1662;Parent=gene:Rv1662;Name=pks8-1;biotype=protein_coding;transcript_id=Rv1662 Chromosome ena exon 1881704 1886512 . + . Parent=transcript:Rv1662;Name=Rv1662-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1662-1;rank=1 Chromosome ena CDS 1881704 1886512 . + 0 ID=CDS:Rv1662;Parent=transcript:Rv1662;protein_id=Rv1662 ### -Chromosome ena gene 1886512 1888020 . + . ID=gene:Rv1663;Name=pks17;biotype=protein_coding;description=Probable polyketide synthase Pks17;gene_id=Rv1663;logic_name=ena +Chromosome ena gene 1886512 1888020 . + . ID=gene:Rv1663;Name=pks17;biotype=protein_coding;description=Probable polyketide synthase Pks17;gene_id=Rv1663;logic_name=ena Chromosome ena mRNA 1886512 1888020 . + . ID=transcript:Rv1663;Parent=gene:Rv1663;Name=pks17-1;biotype=protein_coding;transcript_id=Rv1663 Chromosome ena exon 1886512 1888020 . + . Parent=transcript:Rv1663;Name=Rv1663-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1663-1;rank=1 Chromosome ena CDS 1886512 1888020 . + 0 ID=CDS:Rv1663;Parent=transcript:Rv1663;protein_id=Rv1663 ### -Chromosome ena gene 1888026 1891079 . + . ID=gene:Rv1664;Name=pks9;biotype=protein_coding;description=Probable polyketide synthase Pks9;gene_id=Rv1664;logic_name=ena +Chromosome ena gene 1888026 1891079 . + . ID=gene:Rv1664;Name=pks9;biotype=protein_coding;description=Probable polyketide synthase Pks9;gene_id=Rv1664;logic_name=ena Chromosome ena mRNA 1888026 1891079 . + . ID=transcript:Rv1664;Parent=gene:Rv1664;Name=pks9-1;biotype=protein_coding;transcript_id=Rv1664 Chromosome ena exon 1888026 1891079 . + . Parent=transcript:Rv1664;Name=Rv1664-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1664-1;rank=1 Chromosome ena CDS 1888026 1891079 . + 0 ID=CDS:Rv1664;Parent=transcript:Rv1664;protein_id=Rv1664 ### -Chromosome ena gene 1891226 1892287 . + . ID=gene:Rv1665;Name=pks11;biotype=protein_coding;description=Chalcone synthase Pks11;gene_id=Rv1665;logic_name=ena +Chromosome ena gene 1891226 1892287 . + . ID=gene:Rv1665;Name=pks11;biotype=protein_coding;description=Chalcone synthase Pks11;gene_id=Rv1665;logic_name=ena Chromosome ena mRNA 1891226 1892287 . + . ID=transcript:Rv1665;Parent=gene:Rv1665;Name=pks11-1;biotype=protein_coding;transcript_id=Rv1665 Chromosome ena exon 1891226 1892287 . + . Parent=transcript:Rv1665;Name=Rv1665-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1665-1;rank=1 Chromosome ena CDS 1891226 1892287 . + 0 ID=CDS:Rv1665;Parent=transcript:Rv1665;protein_id=Rv1665 ### -Chromosome ena gene 1892270 1893562 . - . ID=gene:Rv1666c;Name=cyp139;biotype=protein_coding;description=Probable cytochrome P450 139 Cyp139;gene_id=Rv1666c;logic_name=ena +Chromosome ena gene 1892270 1893562 . - . ID=gene:Rv1666c;Name=cyp139;biotype=protein_coding;description=Probable cytochrome P450 139 Cyp139;gene_id=Rv1666c;logic_name=ena Chromosome ena mRNA 1892270 1893562 . - . ID=transcript:Rv1666c;Parent=gene:Rv1666c;Name=cyp139-1;biotype=protein_coding;transcript_id=Rv1666c Chromosome ena exon 1892270 1893562 . - . Parent=transcript:Rv1666c;Name=Rv1666c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1666c-1;rank=1 Chromosome ena CDS 1892270 1893562 . - 0 ID=CDS:Rv1666c;Parent=transcript:Rv1666c;protein_id=Rv1666c ### -Chromosome ena gene 1893577 1894230 . - . ID=gene:Rv1667c;biotype=protein_coding;description=Probable second part of macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1667c;logic_name=ena +Chromosome ena gene 1893577 1894230 . - . ID=gene:Rv1667c;biotype=protein_coding;description=Probable second part of macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1667c;logic_name=ena Chromosome ena mRNA 1893577 1894230 . - . ID=transcript:Rv1667c;Parent=gene:Rv1667c;biotype=protein_coding;transcript_id=Rv1667c Chromosome ena exon 1893577 1894230 . - . Parent=transcript:Rv1667c;Name=Rv1667c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1667c-1;rank=1 Chromosome ena CDS 1893577 1894230 . - 0 ID=CDS:Rv1667c;Parent=transcript:Rv1667c;protein_id=Rv1667c ### -Chromosome ena gene 1894224 1895342 . - . ID=gene:Rv1668c;biotype=protein_coding;description=Probable first part of macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1668c;logic_name=ena +Chromosome ena gene 1894224 1895342 . - . ID=gene:Rv1668c;biotype=protein_coding;description=Probable first part of macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv1668c;logic_name=ena Chromosome ena mRNA 1894224 1895342 . - . ID=transcript:Rv1668c;Parent=gene:Rv1668c;biotype=protein_coding;transcript_id=Rv1668c Chromosome ena exon 1894224 1895342 . - . Parent=transcript:Rv1668c;Name=Rv1668c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1668c-1;rank=1 Chromosome ena CDS 1894224 1895342 . - 0 ID=CDS:Rv1668c;Parent=transcript:Rv1668c;protein_id=Rv1668c ### -Chromosome ena gene 1895725 1896087 . + . ID=gene:Rv1669;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1669;logic_name=ena +Chromosome ena gene 1895725 1896087 . + . ID=gene:Rv1669;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1669;logic_name=ena Chromosome ena mRNA 1895725 1896087 . + . ID=transcript:Rv1669;Parent=gene:Rv1669;biotype=protein_coding;transcript_id=Rv1669 Chromosome ena exon 1895725 1896087 . + . Parent=transcript:Rv1669;Name=Rv1669-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1669-1;rank=1 Chromosome ena CDS 1895725 1896087 . + 0 ID=CDS:Rv1669;Parent=transcript:Rv1669;protein_id=Rv1669 ### -Chromosome ena gene 1896120 1896467 . + . ID=gene:Rv1670;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1670;logic_name=ena +Chromosome ena gene 1896120 1896467 . + . ID=gene:Rv1670;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1670;logic_name=ena Chromosome ena mRNA 1896120 1896467 . + . ID=transcript:Rv1670;Parent=gene:Rv1670;biotype=protein_coding;transcript_id=Rv1670 Chromosome ena exon 1896120 1896467 . + . Parent=transcript:Rv1670;Name=Rv1670-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1670-1;rank=1 Chromosome ena CDS 1896120 1896467 . + 0 ID=CDS:Rv1670;Parent=transcript:Rv1670;protein_id=Rv1670 ### -Chromosome ena gene 1896475 1896867 . + . ID=gene:Rv1671;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1671;logic_name=ena +Chromosome ena gene 1896475 1896867 . + . ID=gene:Rv1671;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1671;logic_name=ena Chromosome ena mRNA 1896475 1896867 . + . ID=transcript:Rv1671;Parent=gene:Rv1671;biotype=protein_coding;transcript_id=Rv1671 Chromosome ena exon 1896475 1896867 . + . Parent=transcript:Rv1671;Name=Rv1671-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1671-1;rank=1 Chromosome ena CDS 1896475 1896867 . + 0 ID=CDS:Rv1671;Parent=transcript:Rv1671;protein_id=Rv1671 ### -Chromosome ena gene 1896876 1898207 . - . ID=gene:Rv1672c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1672c;logic_name=ena +Chromosome ena gene 1896876 1898207 . - . ID=gene:Rv1672c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv1672c;logic_name=ena Chromosome ena mRNA 1896876 1898207 . - . ID=transcript:Rv1672c;Parent=gene:Rv1672c;biotype=protein_coding;transcript_id=Rv1672c Chromosome ena exon 1896876 1898207 . - . Parent=transcript:Rv1672c;Name=Rv1672c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1672c-1;rank=1 Chromosome ena CDS 1896876 1898207 . - 0 ID=CDS:Rv1672c;Parent=transcript:Rv1672c;protein_id=Rv1672c ### -Chromosome ena gene 1898300 1899232 . - . ID=gene:Rv1673c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1673c;logic_name=ena +Chromosome ena gene 1898300 1899232 . - . ID=gene:Rv1673c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1673c;logic_name=ena Chromosome ena mRNA 1898300 1899232 . - . ID=transcript:Rv1673c;Parent=gene:Rv1673c;biotype=protein_coding;transcript_id=Rv1673c Chromosome ena exon 1898300 1899232 . - . Parent=transcript:Rv1673c;Name=Rv1673c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1673c-1;rank=1 Chromosome ena CDS 1898300 1899232 . - 0 ID=CDS:Rv1673c;Parent=transcript:Rv1673c;protein_id=Rv1673c ### -Chromosome ena gene 1899260 1899916 . - . ID=gene:Rv1674c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1674c;logic_name=ena +Chromosome ena gene 1899260 1899916 . - . ID=gene:Rv1674c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1674c;logic_name=ena Chromosome ena mRNA 1899260 1899916 . - . ID=transcript:Rv1674c;Parent=gene:Rv1674c;biotype=protein_coding;transcript_id=Rv1674c Chromosome ena exon 1899260 1899916 . - . Parent=transcript:Rv1674c;Name=Rv1674c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1674c-1;rank=1 Chromosome ena CDS 1899260 1899916 . - 0 ID=CDS:Rv1674c;Parent=transcript:Rv1674c;protein_id=Rv1674c ### -Chromosome ena gene 1900241 1900975 . - . ID=gene:Rv1675c;Name=cmr;biotype=protein_coding;description=Probable transcriptional regulatory protein Cmr;gene_id=Rv1675c;logic_name=ena +Chromosome ena gene 1900241 1900975 . - . ID=gene:Rv1675c;Name=cmr;biotype=protein_coding;description=Probable transcriptional regulatory protein Cmr;gene_id=Rv1675c;logic_name=ena Chromosome ena mRNA 1900241 1900975 . - . ID=transcript:Rv1675c;Parent=gene:Rv1675c;Name=cmr-1;biotype=protein_coding;transcript_id=Rv1675c Chromosome ena exon 1900241 1900975 . - . Parent=transcript:Rv1675c;Name=Rv1675c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1675c-1;rank=1 Chromosome ena CDS 1900241 1900975 . - 0 ID=CDS:Rv1675c;Parent=transcript:Rv1675c;protein_id=Rv1675c ### -Chromosome ena gene 1901047 1901751 . + . ID=gene:Rv1676;biotype=protein_coding;description=Unknown protein;gene_id=Rv1676;logic_name=ena +Chromosome ena gene 1901047 1901751 . + . ID=gene:Rv1676;biotype=protein_coding;description=Unknown protein;gene_id=Rv1676;logic_name=ena Chromosome ena mRNA 1901047 1901751 . + . ID=transcript:Rv1676;Parent=gene:Rv1676;biotype=protein_coding;transcript_id=Rv1676 Chromosome ena exon 1901047 1901751 . + . Parent=transcript:Rv1676;Name=Rv1676-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1676-1;rank=1 Chromosome ena CDS 1901047 1901751 . + 0 ID=CDS:Rv1676;Parent=transcript:Rv1676;protein_id=Rv1676 ### -Chromosome ena gene 1901748 1902296 . + . ID=gene:Rv1677;Name=dsbF;biotype=protein_coding;description=Probable conserved lipoprotein DsbF;gene_id=Rv1677;logic_name=ena +Chromosome ena gene 1901748 1902296 . + . ID=gene:Rv1677;Name=dsbF;biotype=protein_coding;description=Probable conserved lipoprotein DsbF;gene_id=Rv1677;logic_name=ena Chromosome ena mRNA 1901748 1902296 . + . ID=transcript:Rv1677;Parent=gene:Rv1677;Name=dsbF-1;biotype=protein_coding;transcript_id=Rv1677 Chromosome ena exon 1901748 1902296 . + . Parent=transcript:Rv1677;Name=Rv1677-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1677-1;rank=1 Chromosome ena CDS 1901748 1902296 . + 0 ID=CDS:Rv1677;Parent=transcript:Rv1677;protein_id=Rv1677 ### -Chromosome ena gene 1902397 1903299 . + . ID=gene:Rv1678;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1678;logic_name=ena +Chromosome ena gene 1902397 1903299 . + . ID=gene:Rv1678;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv1678;logic_name=ena Chromosome ena mRNA 1902397 1903299 . + . ID=transcript:Rv1678;Parent=gene:Rv1678;biotype=protein_coding;transcript_id=Rv1678 Chromosome ena exon 1902397 1903299 . + . Parent=transcript:Rv1678;Name=Rv1678-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1678-1;rank=1 Chromosome ena CDS 1902397 1903299 . + 0 ID=CDS:Rv1678;Parent=transcript:Rv1678;protein_id=Rv1678 ### -Chromosome ena gene 1903299 1904420 . + . ID=gene:Rv1679;Name=fadE16;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE16;gene_id=Rv1679;logic_name=ena +Chromosome ena gene 1903299 1904420 . + . ID=gene:Rv1679;Name=fadE16;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE16;gene_id=Rv1679;logic_name=ena Chromosome ena mRNA 1903299 1904420 . + . ID=transcript:Rv1679;Parent=gene:Rv1679;Name=fadE16-1;biotype=protein_coding;transcript_id=Rv1679 Chromosome ena exon 1903299 1904420 . + . Parent=transcript:Rv1679;Name=Rv1679-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1679-1;rank=1 Chromosome ena CDS 1903299 1904420 . + 0 ID=CDS:Rv1679;Parent=transcript:Rv1679;protein_id=Rv1679 ### -Chromosome ena gene 1904429 1905253 . + . ID=gene:Rv1680;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1680;logic_name=ena +Chromosome ena gene 1904429 1905253 . + . ID=gene:Rv1680;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1680;logic_name=ena Chromosome ena mRNA 1904429 1905253 . + . ID=transcript:Rv1680;Parent=gene:Rv1680;biotype=protein_coding;transcript_id=Rv1680 Chromosome ena exon 1904429 1905253 . + . Parent=transcript:Rv1680;Name=Rv1680-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1680-1;rank=1 Chromosome ena CDS 1904429 1905253 . + 0 ID=CDS:Rv1680;Parent=transcript:Rv1680;protein_id=Rv1680 ### -Chromosome ena gene 1905250 1906242 . + . ID=gene:Rv1681;Name=moeX;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeX;gene_id=Rv1681;logic_name=ena +Chromosome ena gene 1905250 1906242 . + . ID=gene:Rv1681;Name=moeX;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeX;gene_id=Rv1681;logic_name=ena Chromosome ena mRNA 1905250 1906242 . + . ID=transcript:Rv1681;Parent=gene:Rv1681;Name=moeX-1;biotype=protein_coding;transcript_id=Rv1681 Chromosome ena exon 1905250 1906242 . + . Parent=transcript:Rv1681;Name=Rv1681-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1681-1;rank=1 Chromosome ena CDS 1905250 1906242 . + 0 ID=CDS:Rv1681;Parent=transcript:Rv1681;protein_id=Rv1681 ### -Chromosome ena gene 1906403 1907320 . + . ID=gene:Rv1682;biotype=protein_coding;description=Probable coiled-coil structural protein;gene_id=Rv1682;logic_name=ena +Chromosome ena gene 1906403 1907320 . + . ID=gene:Rv1682;biotype=protein_coding;description=Probable coiled-coil structural protein;gene_id=Rv1682;logic_name=ena Chromosome ena mRNA 1906403 1907320 . + . ID=transcript:Rv1682;Parent=gene:Rv1682;biotype=protein_coding;transcript_id=Rv1682 Chromosome ena exon 1906403 1907320 . + . Parent=transcript:Rv1682;Name=Rv1682-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1682-1;rank=1 Chromosome ena CDS 1906403 1907320 . + 0 ID=CDS:Rv1682;Parent=transcript:Rv1682;protein_id=Rv1682 ### -Chromosome ena gene 1907594 1910593 . + . ID=gene:Rv1683;biotype=protein_coding;description=Possible bifunctional enzyme%3B long-chain acyl-CoA synthase and lipase.;gene_id=Rv1683;logic_name=ena +Chromosome ena gene 1907594 1910593 . + . ID=gene:Rv1683;biotype=protein_coding;description=Possible bifunctional enzyme%3B long-chain acyl-CoA synthase and lipase.;gene_id=Rv1683;logic_name=ena Chromosome ena mRNA 1907594 1910593 . + . ID=transcript:Rv1683;Parent=gene:Rv1683;biotype=protein_coding;transcript_id=Rv1683 Chromosome ena exon 1907594 1910593 . + . Parent=transcript:Rv1683;Name=Rv1683-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1683-1;rank=1 Chromosome ena CDS 1907594 1910593 . + 0 ID=CDS:Rv1683;Parent=transcript:Rv1683;protein_id=Rv1683 ### -Chromosome ena gene 1910586 1910810 . + . ID=gene:Rv1684;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1684;logic_name=ena +Chromosome ena gene 1910586 1910810 . + . ID=gene:Rv1684;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1684;logic_name=ena Chromosome ena mRNA 1910586 1910810 . + . ID=transcript:Rv1684;Parent=gene:Rv1684;biotype=protein_coding;transcript_id=Rv1684 Chromosome ena exon 1910586 1910810 . + . Parent=transcript:Rv1684;Name=Rv1684-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1684-1;rank=1 Chromosome ena CDS 1910586 1910810 . + 0 ID=CDS:Rv1684;Parent=transcript:Rv1684;protein_id=Rv1684 ### -Chromosome ena gene 1910776 1911399 . - . ID=gene:Rv1685c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1685c;logic_name=ena +Chromosome ena gene 1910776 1911399 . - . ID=gene:Rv1685c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1685c;logic_name=ena Chromosome ena mRNA 1910776 1911399 . - . ID=transcript:Rv1685c;Parent=gene:Rv1685c;biotype=protein_coding;transcript_id=Rv1685c Chromosome ena exon 1910776 1911399 . - . Parent=transcript:Rv1685c;Name=Rv1685c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1685c-1;rank=1 Chromosome ena CDS 1910776 1911399 . - 0 ID=CDS:Rv1685c;Parent=transcript:Rv1685c;protein_id=Rv1685c ### -Chromosome ena gene 1911401 1912081 . - . ID=gene:Rv1686c;biotype=protein_coding;description=Probable conserved integral membrane protein ABC transporter;gene_id=Rv1686c;logic_name=ena +Chromosome ena gene 1911401 1912081 . - . ID=gene:Rv1686c;biotype=protein_coding;description=Probable conserved integral membrane protein ABC transporter;gene_id=Rv1686c;logic_name=ena Chromosome ena mRNA 1911401 1912081 . - . ID=transcript:Rv1686c;Parent=gene:Rv1686c;biotype=protein_coding;transcript_id=Rv1686c Chromosome ena exon 1911401 1912081 . - . Parent=transcript:Rv1686c;Name=Rv1686c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1686c-1;rank=1 Chromosome ena CDS 1911401 1912081 . - 0 ID=CDS:Rv1686c;Parent=transcript:Rv1686c;protein_id=Rv1686c ### -Chromosome ena gene 1912153 1912920 . - . ID=gene:Rv1687c;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv1687c;logic_name=ena +Chromosome ena gene 1912153 1912920 . - . ID=gene:Rv1687c;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv1687c;logic_name=ena Chromosome ena mRNA 1912153 1912920 . - . ID=transcript:Rv1687c;Parent=gene:Rv1687c;biotype=protein_coding;transcript_id=Rv1687c Chromosome ena exon 1912153 1912920 . - . Parent=transcript:Rv1687c;Name=Rv1687c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1687c-1;rank=1 Chromosome ena CDS 1912153 1912920 . - 0 ID=CDS:Rv1687c;Parent=transcript:Rv1687c;protein_id=Rv1687c ### -Chromosome ena gene 1912979 1913590 . + . ID=gene:Rv1688;Name=mpg;biotype=protein_coding;description=Possible 3-methyladenine DNA glycosylase Mpg;gene_id=Rv1688;logic_name=ena +Chromosome ena gene 1912979 1913590 . + . ID=gene:Rv1688;Name=mpg;biotype=protein_coding;description=Possible 3-methyladenine DNA glycosylase Mpg;gene_id=Rv1688;logic_name=ena Chromosome ena mRNA 1912979 1913590 . + . ID=transcript:Rv1688;Parent=gene:Rv1688;Name=mpg-1;biotype=protein_coding;transcript_id=Rv1688 Chromosome ena exon 1912979 1913590 . + . Parent=transcript:Rv1688;Name=Rv1688-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1688-1;rank=1 Chromosome ena CDS 1912979 1913590 . + 0 ID=CDS:Rv1688;Parent=transcript:Rv1688;protein_id=Rv1688 ### -Chromosome ena gene 1913602 1914876 . + . ID=gene:Rv1689;Name=tyrS;biotype=protein_coding;description=Probable tyrosyl-tRNA synthase TyrS (TYRRS);gene_id=Rv1689;logic_name=ena +Chromosome ena gene 1913602 1914876 . + . ID=gene:Rv1689;Name=tyrS;biotype=protein_coding;description=Probable tyrosyl-tRNA synthase TyrS (TYRRS);gene_id=Rv1689;logic_name=ena Chromosome ena mRNA 1913602 1914876 . + . ID=transcript:Rv1689;Parent=gene:Rv1689;Name=tyrS-1;biotype=protein_coding;transcript_id=Rv1689 Chromosome ena exon 1913602 1914876 . + . Parent=transcript:Rv1689;Name=Rv1689-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1689-1;rank=1 Chromosome ena CDS 1913602 1914876 . + 0 ID=CDS:Rv1689;Parent=transcript:Rv1689;protein_id=Rv1689 @@ -8864,157 +8864,157 @@ Chromosome ena transcript 1914962 1915190 . - . ID=transcript:EBG00000313337;Par Chromosome ena exon 1914962 1915190 . - . Parent=transcript:EBG00000313337;Name=EBG00000313337;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313337;rank=1 ### Chromosome ena_gene biological_region 1914962 1915190 . - . external_name=AL123456.3:gene:complement(1914962..1915190);logic_name=ena_gene -Chromosome ena gene 1915527 1915910 . + . ID=gene:Rv1690;Name=lprJ;biotype=protein_coding;description=Probable lipoprotein LprJ;gene_id=Rv1690;logic_name=ena +Chromosome ena gene 1915527 1915910 . + . ID=gene:Rv1690;Name=lprJ;biotype=protein_coding;description=Probable lipoprotein LprJ;gene_id=Rv1690;logic_name=ena Chromosome ena mRNA 1915527 1915910 . + . ID=transcript:Rv1690;Parent=gene:Rv1690;Name=lprJ-1;biotype=protein_coding;transcript_id=Rv1690 Chromosome ena exon 1915527 1915910 . + . Parent=transcript:Rv1690;Name=Rv1690-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1690-1;rank=1 Chromosome ena CDS 1915527 1915910 . + 0 ID=CDS:Rv1690;Parent=transcript:Rv1690;protein_id=Rv1690 ### -Chromosome ena gene 1915949 1916701 . + . ID=gene:Rv1691;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1691;logic_name=ena +Chromosome ena gene 1915949 1916701 . + . ID=gene:Rv1691;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1691;logic_name=ena Chromosome ena mRNA 1915949 1916701 . + . ID=transcript:Rv1691;Parent=gene:Rv1691;biotype=protein_coding;transcript_id=Rv1691 Chromosome ena exon 1915949 1916701 . + . Parent=transcript:Rv1691;Name=Rv1691-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1691-1;rank=1 Chromosome ena CDS 1915949 1916701 . + 0 ID=CDS:Rv1691;Parent=transcript:Rv1691;protein_id=Rv1691 ### -Chromosome ena gene 1916698 1917759 . + . ID=gene:Rv1692;biotype=protein_coding;description=Probable phosphatase;gene_id=Rv1692;logic_name=ena +Chromosome ena gene 1916698 1917759 . + . ID=gene:Rv1692;biotype=protein_coding;description=Probable phosphatase;gene_id=Rv1692;logic_name=ena Chromosome ena mRNA 1916698 1917759 . + . ID=transcript:Rv1692;Parent=gene:Rv1692;biotype=protein_coding;transcript_id=Rv1692 Chromosome ena exon 1916698 1917759 . + . Parent=transcript:Rv1692;Name=Rv1692-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1692-1;rank=1 Chromosome ena CDS 1916698 1917759 . + 0 ID=CDS:Rv1692;Parent=transcript:Rv1692;protein_id=Rv1692 ### -Chromosome ena gene 1917756 1917932 . + . ID=gene:Rv1693;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1693;logic_name=ena +Chromosome ena gene 1917756 1917932 . + . ID=gene:Rv1693;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1693;logic_name=ena Chromosome ena mRNA 1917756 1917932 . + . ID=transcript:Rv1693;Parent=gene:Rv1693;biotype=protein_coding;transcript_id=Rv1693 Chromosome ena exon 1917756 1917932 . + . Parent=transcript:Rv1693;Name=Rv1693-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1693-1;rank=1 Chromosome ena CDS 1917756 1917932 . + 0 ID=CDS:Rv1693;Parent=transcript:Rv1693;protein_id=Rv1693 ### -Chromosome ena gene 1917940 1918746 . + . ID=gene:Rv1694;Name=tlyA;biotype=protein_coding;description=2'-O-methyltransferase TlyA;gene_id=Rv1694;logic_name=ena +Chromosome ena gene 1917940 1918746 . + . ID=gene:Rv1694;Name=tlyA;biotype=protein_coding;description=2'-O-methyltransferase TlyA;gene_id=Rv1694;logic_name=ena Chromosome ena mRNA 1917940 1918746 . + . ID=transcript:Rv1694;Parent=gene:Rv1694;Name=tlyA-1;biotype=protein_coding;transcript_id=Rv1694 Chromosome ena exon 1917940 1918746 . + . Parent=transcript:Rv1694;Name=Rv1694-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1694-1;rank=1 Chromosome ena CDS 1917940 1918746 . + 0 ID=CDS:Rv1694;Parent=transcript:Rv1694;protein_id=Rv1694 ### -Chromosome ena gene 1918746 1919669 . + . ID=gene:Rv1695;Name=ppnK;biotype=protein_coding;description=Inorganic polyphosphate/ATP-NAD kinase PpnK (poly(P)/ATP NAD kinase);gene_id=Rv1695;logic_name=ena +Chromosome ena gene 1918746 1919669 . + . ID=gene:Rv1695;Name=ppnK;biotype=protein_coding;description=Inorganic polyphosphate/ATP-NAD kinase PpnK (poly(P)/ATP NAD kinase);gene_id=Rv1695;logic_name=ena Chromosome ena mRNA 1918746 1919669 . + . ID=transcript:Rv1695;Parent=gene:Rv1695;Name=ppnK-1;biotype=protein_coding;transcript_id=Rv1695 Chromosome ena exon 1918746 1919669 . + . Parent=transcript:Rv1695;Name=Rv1695-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1695-1;rank=1 Chromosome ena CDS 1918746 1919669 . + 0 ID=CDS:Rv1695;Parent=transcript:Rv1695;protein_id=Rv1695 ### -Chromosome ena gene 1919683 1921446 . + . ID=gene:Rv1696;Name=recN;biotype=protein_coding;description=Probable DNA repair protein RecN (recombination protein N);gene_id=Rv1696;logic_name=ena +Chromosome ena gene 1919683 1921446 . + . ID=gene:Rv1696;Name=recN;biotype=protein_coding;description=Probable DNA repair protein RecN (recombination protein N);gene_id=Rv1696;logic_name=ena Chromosome ena mRNA 1919683 1921446 . + . ID=transcript:Rv1696;Parent=gene:Rv1696;Name=recN-1;biotype=protein_coding;transcript_id=Rv1696 Chromosome ena exon 1919683 1921446 . + . Parent=transcript:Rv1696;Name=Rv1696-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1696-1;rank=1 Chromosome ena CDS 1919683 1921446 . + 0 ID=CDS:Rv1696;Parent=transcript:Rv1696;protein_id=Rv1696 ### -Chromosome ena gene 1921542 1922723 . + . ID=gene:Rv1697;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1697;logic_name=ena +Chromosome ena gene 1921542 1922723 . + . ID=gene:Rv1697;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1697;logic_name=ena Chromosome ena mRNA 1921542 1922723 . + . ID=transcript:Rv1697;Parent=gene:Rv1697;biotype=protein_coding;transcript_id=Rv1697 Chromosome ena exon 1921542 1922723 . + . Parent=transcript:Rv1697;Name=Rv1697-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1697-1;rank=1 Chromosome ena CDS 1921542 1922723 . + 0 ID=CDS:Rv1697;Parent=transcript:Rv1697;protein_id=Rv1697 ### -Chromosome ena gene 1922745 1923689 . + . ID=gene:Rv1698;Name=mctB;biotype=protein_coding;description=Outer membrane protein MctB;gene_id=Rv1698;logic_name=ena +Chromosome ena gene 1922745 1923689 . + . ID=gene:Rv1698;Name=mctB;biotype=protein_coding;description=Outer membrane protein MctB;gene_id=Rv1698;logic_name=ena Chromosome ena mRNA 1922745 1923689 . + . ID=transcript:Rv1698;Parent=gene:Rv1698;Name=mctB-1;biotype=protein_coding;transcript_id=Rv1698 Chromosome ena exon 1922745 1923689 . + . Parent=transcript:Rv1698;Name=Rv1698-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1698-1;rank=1 Chromosome ena CDS 1922745 1923689 . + 0 ID=CDS:Rv1698;Parent=transcript:Rv1698;protein_id=Rv1698 ### -Chromosome ena gene 1923829 1925589 . + . ID=gene:Rv1699;Name=pyrG;biotype=protein_coding;description=Probable CTP synthase PyrG;gene_id=Rv1699;logic_name=ena +Chromosome ena gene 1923829 1925589 . + . ID=gene:Rv1699;Name=pyrG;biotype=protein_coding;description=Probable CTP synthase PyrG;gene_id=Rv1699;logic_name=ena Chromosome ena mRNA 1923829 1925589 . + . ID=transcript:Rv1699;Parent=gene:Rv1699;Name=pyrG-1;biotype=protein_coding;transcript_id=Rv1699 Chromosome ena exon 1923829 1925589 . + . Parent=transcript:Rv1699;Name=Rv1699-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1699-1;rank=1 Chromosome ena CDS 1923829 1925589 . + 0 ID=CDS:Rv1699;Parent=transcript:Rv1699;protein_id=Rv1699 ### -Chromosome ena gene 1925582 1926205 . + . ID=gene:Rv1700;biotype=protein_coding;description=NUDIX hydrolase;gene_id=Rv1700;logic_name=ena +Chromosome ena gene 1925582 1926205 . + . ID=gene:Rv1700;biotype=protein_coding;description=NUDIX hydrolase;gene_id=Rv1700;logic_name=ena Chromosome ena mRNA 1925582 1926205 . + . ID=transcript:Rv1700;Parent=gene:Rv1700;biotype=protein_coding;transcript_id=Rv1700 Chromosome ena exon 1925582 1926205 . + . Parent=transcript:Rv1700;Name=Rv1700-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1700-1;rank=1 Chromosome ena CDS 1925582 1926205 . + 0 ID=CDS:Rv1700;Parent=transcript:Rv1700;protein_id=Rv1700 ### -Chromosome ena gene 1926202 1927137 . + . ID=gene:Rv1701;biotype=protein_coding;description=Probable integrase/recombinase;gene_id=Rv1701;logic_name=ena +Chromosome ena gene 1926202 1927137 . + . ID=gene:Rv1701;biotype=protein_coding;description=Probable integrase/recombinase;gene_id=Rv1701;logic_name=ena Chromosome ena mRNA 1926202 1927137 . + . ID=transcript:Rv1701;Parent=gene:Rv1701;biotype=protein_coding;transcript_id=Rv1701 Chromosome ena exon 1926202 1927137 . + . Parent=transcript:Rv1701;Name=Rv1701-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1701-1;rank=1 Chromosome ena CDS 1926202 1927137 . + 0 ID=CDS:Rv1701;Parent=transcript:Rv1701;protein_id=Rv1701 ### -Chromosome ena gene 1927211 1928575 . - . ID=gene:Rv1702c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1702c;logic_name=ena +Chromosome ena gene 1927211 1928575 . - . ID=gene:Rv1702c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1702c;logic_name=ena Chromosome ena mRNA 1927211 1928575 . - . ID=transcript:Rv1702c;Parent=gene:Rv1702c;biotype=protein_coding;transcript_id=Rv1702c Chromosome ena exon 1927211 1928575 . - . Parent=transcript:Rv1702c;Name=Rv1702c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1702c-1;rank=1 Chromosome ena CDS 1927211 1928575 . - 0 ID=CDS:Rv1702c;Parent=transcript:Rv1702c;protein_id=Rv1702c ### -Chromosome ena gene 1929131 1929721 . - . ID=gene:Rv1703c;biotype=protein_coding;description=Probable catechol-O-methyltransferase;gene_id=Rv1703c;logic_name=ena +Chromosome ena gene 1929131 1929721 . - . ID=gene:Rv1703c;biotype=protein_coding;description=Probable catechol-O-methyltransferase;gene_id=Rv1703c;logic_name=ena Chromosome ena mRNA 1929131 1929721 . - . ID=transcript:Rv1703c;Parent=gene:Rv1703c;biotype=protein_coding;transcript_id=Rv1703c Chromosome ena exon 1929131 1929721 . - . Parent=transcript:Rv1703c;Name=Rv1703c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1703c-1;rank=1 Chromosome ena CDS 1929131 1929721 . - 0 ID=CDS:Rv1703c;Parent=transcript:Rv1703c;protein_id=Rv1703c ### -Chromosome ena gene 1929786 1931456 . - . ID=gene:Rv1704c;Name=cycA;biotype=protein_coding;description=Probable D-serine/alanine/glycine transporter protein CycA;gene_id=Rv1704c;logic_name=ena +Chromosome ena gene 1929786 1931456 . - . ID=gene:Rv1704c;Name=cycA;biotype=protein_coding;description=Probable D-serine/alanine/glycine transporter protein CycA;gene_id=Rv1704c;logic_name=ena Chromosome ena mRNA 1929786 1931456 . - . ID=transcript:Rv1704c;Parent=gene:Rv1704c;Name=cycA-1;biotype=protein_coding;transcript_id=Rv1704c Chromosome ena exon 1929786 1931456 . - . Parent=transcript:Rv1704c;Name=Rv1704c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1704c-1;rank=1 Chromosome ena CDS 1929786 1931456 . - 0 ID=CDS:Rv1704c;Parent=transcript:Rv1704c;protein_id=Rv1704c ### -Chromosome ena gene 1931497 1932654 . - . ID=gene:Rv1705c;Name=PPE22;biotype=protein_coding;description=PPE family protein PPE22;gene_id=Rv1705c;logic_name=ena +Chromosome ena gene 1931497 1932654 . - . ID=gene:Rv1705c;Name=PPE22;biotype=protein_coding;description=PPE family protein PPE22;gene_id=Rv1705c;logic_name=ena Chromosome ena mRNA 1931497 1932654 . - . ID=transcript:Rv1705c;Parent=gene:Rv1705c;Name=PPE22-1;biotype=protein_coding;transcript_id=Rv1705c Chromosome ena exon 1931497 1932654 . - . Parent=transcript:Rv1705c;Name=Rv1705c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1705c-1;rank=1 Chromosome ena CDS 1931497 1932654 . - 0 ID=CDS:Rv1705c;Parent=transcript:Rv1705c;protein_id=Rv1705c ### -Chromosome ena gene 1932694 1933878 . - . ID=gene:Rv1706c;Name=PPE23;biotype=protein_coding;description=PPE family protein PPE23;gene_id=Rv1706c;logic_name=ena +Chromosome ena gene 1932694 1933878 . - . ID=gene:Rv1706c;Name=PPE23;biotype=protein_coding;description=PPE family protein PPE23;gene_id=Rv1706c;logic_name=ena Chromosome ena mRNA 1932694 1933878 . - . ID=transcript:Rv1706c;Parent=gene:Rv1706c;Name=PPE23-1;biotype=protein_coding;transcript_id=Rv1706c Chromosome ena exon 1932694 1933878 . - . Parent=transcript:Rv1706c;Name=Rv1706c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1706c-1;rank=1 Chromosome ena CDS 1932694 1933878 . - 0 ID=CDS:Rv1706c;Parent=transcript:Rv1706c;protein_id=Rv1706c ### -Chromosome ena gene 1934482 1934649 . - . ID=gene:Rv1706A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1706A;logic_name=ena +Chromosome ena gene 1934482 1934649 . - . ID=gene:Rv1706A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1706A;logic_name=ena Chromosome ena mRNA 1934482 1934649 . - . ID=transcript:Rv1706A;Parent=gene:Rv1706A;biotype=protein_coding;transcript_id=Rv1706A Chromosome ena exon 1934482 1934649 . - . Parent=transcript:Rv1706A;Name=Rv1706A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1706A-1;rank=1 Chromosome ena CDS 1934482 1934649 . - 0 ID=CDS:Rv1706A;Parent=transcript:Rv1706A;protein_id=Rv1706A ### -Chromosome ena gene 1934882 1936342 . + . ID=gene:Rv1707;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1707;logic_name=ena +Chromosome ena gene 1934882 1936342 . + . ID=gene:Rv1707;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1707;logic_name=ena Chromosome ena mRNA 1934882 1936342 . + . ID=transcript:Rv1707;Parent=gene:Rv1707;biotype=protein_coding;transcript_id=Rv1707 Chromosome ena exon 1934882 1936342 . + . Parent=transcript:Rv1707;Name=Rv1707-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1707-1;rank=1 Chromosome ena CDS 1934882 1936342 . + 0 ID=CDS:Rv1707;Parent=transcript:Rv1707;protein_id=Rv1707 ### -Chromosome ena gene 1936360 1937316 . + . ID=gene:Rv1708;biotype=protein_coding;description=Putative initiation inhibitor protein;gene_id=Rv1708;logic_name=ena +Chromosome ena gene 1936360 1937316 . + . ID=gene:Rv1708;biotype=protein_coding;description=Putative initiation inhibitor protein;gene_id=Rv1708;logic_name=ena Chromosome ena mRNA 1936360 1937316 . + . ID=transcript:Rv1708;Parent=gene:Rv1708;biotype=protein_coding;transcript_id=Rv1708 Chromosome ena exon 1936360 1937316 . + . Parent=transcript:Rv1708;Name=Rv1708-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1708-1;rank=1 Chromosome ena CDS 1936360 1937316 . + 0 ID=CDS:Rv1708;Parent=transcript:Rv1708;protein_id=Rv1708 ### -Chromosome ena gene 1937313 1938149 . + . ID=gene:Rv1709;Name=scpA;biotype=protein_coding;description=Possible segregation and condensation protein ScpA;gene_id=Rv1709;logic_name=ena +Chromosome ena gene 1937313 1938149 . + . ID=gene:Rv1709;Name=scpA;biotype=protein_coding;description=Possible segregation and condensation protein ScpA;gene_id=Rv1709;logic_name=ena Chromosome ena mRNA 1937313 1938149 . + . ID=transcript:Rv1709;Parent=gene:Rv1709;Name=scpA-1;biotype=protein_coding;transcript_id=Rv1709 Chromosome ena exon 1937313 1938149 . + . Parent=transcript:Rv1709;Name=Rv1709-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1709-1;rank=1 Chromosome ena CDS 1937313 1938149 . + 0 ID=CDS:Rv1709;Parent=transcript:Rv1709;protein_id=Rv1709 ### -Chromosome ena gene 1938146 1938841 . + . ID=gene:Rv1710;Name=scpB;biotype=protein_coding;description=Possible segregation and condensation protein ScpB;gene_id=Rv1710;logic_name=ena +Chromosome ena gene 1938146 1938841 . + . ID=gene:Rv1710;Name=scpB;biotype=protein_coding;description=Possible segregation and condensation protein ScpB;gene_id=Rv1710;logic_name=ena Chromosome ena mRNA 1938146 1938841 . + . ID=transcript:Rv1710;Parent=gene:Rv1710;Name=scpB-1;biotype=protein_coding;transcript_id=Rv1710 Chromosome ena exon 1938146 1938841 . + . Parent=transcript:Rv1710;Name=Rv1710-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1710-1;rank=1 Chromosome ena CDS 1938146 1938841 . + 0 ID=CDS:Rv1710;Parent=transcript:Rv1710;protein_id=Rv1710 ### -Chromosome ena gene 1938838 1939602 . + . ID=gene:Rv1711;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1711;logic_name=ena +Chromosome ena gene 1938838 1939602 . + . ID=gene:Rv1711;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1711;logic_name=ena Chromosome ena mRNA 1938838 1939602 . + . ID=transcript:Rv1711;Parent=gene:Rv1711;biotype=protein_coding;transcript_id=Rv1711 Chromosome ena exon 1938838 1939602 . + . Parent=transcript:Rv1711;Name=Rv1711-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1711-1;rank=1 Chromosome ena CDS 1938838 1939602 . + 0 ID=CDS:Rv1711;Parent=transcript:Rv1711;protein_id=Rv1711 ### -Chromosome ena gene 1939599 1940291 . + . ID=gene:Rv1712;Name=cmk;biotype=protein_coding;description=Cytidylate kinase Cmk (CMP kinase) (cytidine monophosphate kinase) (ck);gene_id=Rv1712;logic_name=ena +Chromosome ena gene 1939599 1940291 . + . ID=gene:Rv1712;Name=cmk;biotype=protein_coding;description=Cytidylate kinase Cmk (CMP kinase) (cytidine monophosphate kinase) (ck);gene_id=Rv1712;logic_name=ena Chromosome ena mRNA 1939599 1940291 . + . ID=transcript:Rv1712;Parent=gene:Rv1712;Name=cmk-1;biotype=protein_coding;transcript_id=Rv1712 Chromosome ena exon 1939599 1940291 . + . Parent=transcript:Rv1712;Name=Rv1712-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1712-1;rank=1 Chromosome ena CDS 1939599 1940291 . + 0 ID=CDS:Rv1712;Parent=transcript:Rv1712;protein_id=Rv1712 ### -Chromosome ena gene 1940288 1941679 . + . ID=gene:Rv1713;Name=engA;biotype=protein_coding;description=Probable GTP-binding protein EngA;gene_id=Rv1713;logic_name=ena +Chromosome ena gene 1940288 1941679 . + . ID=gene:Rv1713;Name=engA;biotype=protein_coding;description=Probable GTP-binding protein EngA;gene_id=Rv1713;logic_name=ena Chromosome ena mRNA 1940288 1941679 . + . ID=transcript:Rv1713;Parent=gene:Rv1713;Name=engA-1;biotype=protein_coding;transcript_id=Rv1713 Chromosome ena exon 1940288 1941679 . + . Parent=transcript:Rv1713;Name=Rv1713-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1713-1;rank=1 Chromosome ena CDS 1940288 1941679 . + 0 ID=CDS:Rv1713;Parent=transcript:Rv1713;protein_id=Rv1713 ### -Chromosome ena gene 1941853 1942665 . + . ID=gene:Rv1714;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1714;logic_name=ena +Chromosome ena gene 1941853 1942665 . + . ID=gene:Rv1714;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1714;logic_name=ena Chromosome ena mRNA 1941853 1942665 . + . ID=transcript:Rv1714;Parent=gene:Rv1714;biotype=protein_coding;transcript_id=Rv1714 Chromosome ena exon 1941853 1942665 . + . Parent=transcript:Rv1714;Name=Rv1714-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1714-1;rank=1 Chromosome ena CDS 1941853 1942665 . + 0 ID=CDS:Rv1714;Parent=transcript:Rv1714;protein_id=Rv1714 ### -Chromosome ena gene 1942659 1943573 . + . ID=gene:Rv1715;Name=fadB3;biotype=protein_coding;description=Probable 3-hydroxybutyryl-CoA dehydrogenase FadB3 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD);gene_id=Rv1715;logic_name=ena +Chromosome ena gene 1942659 1943573 . + . ID=gene:Rv1715;Name=fadB3;biotype=protein_coding;description=Probable 3-hydroxybutyryl-CoA dehydrogenase FadB3 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD);gene_id=Rv1715;logic_name=ena Chromosome ena mRNA 1942659 1943573 . + . ID=transcript:Rv1715;Parent=gene:Rv1715;Name=fadB3-1;biotype=protein_coding;transcript_id=Rv1715 Chromosome ena exon 1942659 1943573 . + . Parent=transcript:Rv1715;Name=Rv1715-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1715-1;rank=1 Chromosome ena CDS 1942659 1943573 . + 0 ID=CDS:Rv1715;Parent=transcript:Rv1715;protein_id=Rv1715 ### -Chromosome ena gene 1943576 1944406 . + . ID=gene:Rv1716;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1716;logic_name=ena +Chromosome ena gene 1943576 1944406 . + . ID=gene:Rv1716;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1716;logic_name=ena Chromosome ena mRNA 1943576 1944406 . + . ID=transcript:Rv1716;Parent=gene:Rv1716;biotype=protein_coding;transcript_id=Rv1716 Chromosome ena exon 1943576 1944406 . + . Parent=transcript:Rv1716;Name=Rv1716-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1716-1;rank=1 Chromosome ena CDS 1943576 1944406 . + 0 ID=CDS:Rv1716;Parent=transcript:Rv1716;protein_id=Rv1716 ### -Chromosome ena gene 1944406 1944756 . + . ID=gene:Rv1717;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1717;logic_name=ena +Chromosome ena gene 1944406 1944756 . + . ID=gene:Rv1717;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1717;logic_name=ena Chromosome ena mRNA 1944406 1944756 . + . ID=transcript:Rv1717;Parent=gene:Rv1717;biotype=protein_coding;transcript_id=Rv1717 Chromosome ena exon 1944406 1944756 . + . Parent=transcript:Rv1717;Name=Rv1717-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1717-1;rank=1 Chromosome ena CDS 1944406 1944756 . + 0 ID=CDS:Rv1717;Parent=transcript:Rv1717;protein_id=Rv1717 ### -Chromosome ena gene 1944809 1945627 . + . ID=gene:Rv1718;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1718;logic_name=ena +Chromosome ena gene 1944809 1945627 . + . ID=gene:Rv1718;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1718;logic_name=ena Chromosome ena mRNA 1944809 1945627 . + . ID=transcript:Rv1718;Parent=gene:Rv1718;biotype=protein_coding;transcript_id=Rv1718 Chromosome ena exon 1944809 1945627 . + . Parent=transcript:Rv1718;Name=Rv1718-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1718-1;rank=1 Chromosome ena CDS 1944809 1945627 . + 0 ID=CDS:Rv1718;Parent=transcript:Rv1718;protein_id=Rv1718 ### -Chromosome ena gene 1945641 1946420 . + . ID=gene:Rv1719;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1719;logic_name=ena +Chromosome ena gene 1945641 1946420 . + . ID=gene:Rv1719;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1719;logic_name=ena Chromosome ena mRNA 1945641 1946420 . + . ID=transcript:Rv1719;Parent=gene:Rv1719;biotype=protein_coding;transcript_id=Rv1719 Chromosome ena exon 1945641 1946420 . + . Parent=transcript:Rv1719;Name=Rv1719-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1719-1;rank=1 Chromosome ena CDS 1945641 1946420 . + 0 ID=CDS:Rv1719;Parent=transcript:Rv1719;protein_id=Rv1719 @@ -9024,37 +9024,37 @@ Chromosome ena transcript 1946613 1946686 . + . ID=transcript:EBG00000313348;Par Chromosome ena exon 1946613 1946686 . + . Parent=transcript:EBG00000313348;Name=EBG00000313348;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313348;rank=1 ### Chromosome ena_gene biological_region 1946613 1946686 . + . external_name=AL123456.3:gene:1946613..1946686;logic_name=ena_gene -Chromosome ena gene 1947030 1947419 . - . ID=gene:Rv1720c;Name=vapC12;biotype=protein_coding;description=Possible toxin VapC12;gene_id=Rv1720c;logic_name=ena +Chromosome ena gene 1947030 1947419 . - . ID=gene:Rv1720c;Name=vapC12;biotype=protein_coding;description=Possible toxin VapC12;gene_id=Rv1720c;logic_name=ena Chromosome ena mRNA 1947030 1947419 . - . ID=transcript:Rv1720c;Parent=gene:Rv1720c;Name=vapC12-1;biotype=protein_coding;transcript_id=Rv1720c Chromosome ena exon 1947030 1947419 . - . Parent=transcript:Rv1720c;Name=Rv1720c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1720c-1;rank=1 Chromosome ena CDS 1947030 1947419 . - 0 ID=CDS:Rv1720c;Parent=transcript:Rv1720c;protein_id=Rv1720c ### -Chromosome ena gene 1947416 1947643 . - . ID=gene:Rv1721c;Name=vapB12;biotype=protein_coding;description=Possible antitoxin VapB12;gene_id=Rv1721c;logic_name=ena +Chromosome ena gene 1947416 1947643 . - . ID=gene:Rv1721c;Name=vapB12;biotype=protein_coding;description=Possible antitoxin VapB12;gene_id=Rv1721c;logic_name=ena Chromosome ena mRNA 1947416 1947643 . - . ID=transcript:Rv1721c;Parent=gene:Rv1721c;Name=vapB12-1;biotype=protein_coding;transcript_id=Rv1721c Chromosome ena exon 1947416 1947643 . - . Parent=transcript:Rv1721c;Name=Rv1721c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1721c-1;rank=1 Chromosome ena CDS 1947416 1947643 . - 0 ID=CDS:Rv1721c;Parent=transcript:Rv1721c;protein_id=Rv1721c ### -Chromosome ena gene 1947861 1949345 . + . ID=gene:Rv1722;biotype=protein_coding;description=Possible carboxylase;gene_id=Rv1722;logic_name=ena +Chromosome ena gene 1947861 1949345 . + . ID=gene:Rv1722;biotype=protein_coding;description=Possible carboxylase;gene_id=Rv1722;logic_name=ena Chromosome ena mRNA 1947861 1949345 . + . ID=transcript:Rv1722;Parent=gene:Rv1722;biotype=protein_coding;transcript_id=Rv1722 Chromosome ena exon 1947861 1949345 . + . Parent=transcript:Rv1722;Name=Rv1722-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1722-1;rank=1 Chromosome ena CDS 1947861 1949345 . + 0 ID=CDS:Rv1722;Parent=transcript:Rv1722;protein_id=Rv1722 ### -Chromosome ena gene 1949342 1950589 . + . ID=gene:Rv1723;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1723;logic_name=ena +Chromosome ena gene 1949342 1950589 . + . ID=gene:Rv1723;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1723;logic_name=ena Chromosome ena mRNA 1949342 1950589 . + . ID=transcript:Rv1723;Parent=gene:Rv1723;biotype=protein_coding;transcript_id=Rv1723 Chromosome ena exon 1949342 1950589 . + . Parent=transcript:Rv1723;Name=Rv1723-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1723-1;rank=1 Chromosome ena CDS 1949342 1950589 . + 0 ID=CDS:Rv1723;Parent=transcript:Rv1723;protein_id=Rv1723 ### -Chromosome ena gene 1950632 1951051 . - . ID=gene:Rv1724c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1724c;logic_name=ena +Chromosome ena gene 1950632 1951051 . - . ID=gene:Rv1724c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1724c;logic_name=ena Chromosome ena mRNA 1950632 1951051 . - . ID=transcript:Rv1724c;Parent=gene:Rv1724c;biotype=protein_coding;transcript_id=Rv1724c Chromosome ena exon 1950632 1951051 . - . Parent=transcript:Rv1724c;Name=Rv1724c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1724c-1;rank=1 Chromosome ena CDS 1950632 1951051 . - 0 ID=CDS:Rv1724c;Parent=transcript:Rv1724c;protein_id=Rv1724c ### -Chromosome ena gene 1951041 1951751 . - . ID=gene:Rv1725c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1725c;logic_name=ena +Chromosome ena gene 1951041 1951751 . - . ID=gene:Rv1725c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1725c;logic_name=ena Chromosome ena mRNA 1951041 1951751 . - . ID=transcript:Rv1725c;Parent=gene:Rv1725c;biotype=protein_coding;transcript_id=Rv1725c Chromosome ena exon 1951041 1951751 . - . Parent=transcript:Rv1725c;Name=Rv1725c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1725c-1;rank=1 Chromosome ena CDS 1951041 1951751 . - 0 ID=CDS:Rv1725c;Parent=transcript:Rv1725c;protein_id=Rv1725c ### -Chromosome ena gene 1951852 1953237 . + . ID=gene:Rv1726;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1726;logic_name=ena +Chromosome ena gene 1951852 1953237 . + . ID=gene:Rv1726;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1726;logic_name=ena Chromosome ena mRNA 1951852 1953237 . + . ID=transcript:Rv1726;Parent=gene:Rv1726;biotype=protein_coding;transcript_id=Rv1726 Chromosome ena exon 1951852 1953237 . + . Parent=transcript:Rv1726;Name=Rv1726-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1726-1;rank=1 Chromosome ena CDS 1951852 1953237 . + 0 ID=CDS:Rv1726;Parent=transcript:Rv1726;protein_id=Rv1726 @@ -9064,37 +9064,37 @@ Chromosome ena transcript 1952291 1952503 . - . ID=transcript:EBG00000313388;Par Chromosome ena exon 1952291 1952503 . - . Parent=transcript:EBG00000313388;Name=EBG00000313388;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313388;rank=1 ### Chromosome ena_gene biological_region 1952291 1952503 . - . external_name=AL123456.3:gene:complement(1952291..1952503);logic_name=ena_gene -Chromosome ena gene 1953270 1953839 . + . ID=gene:Rv1727;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1727;logic_name=ena +Chromosome ena gene 1953270 1953839 . + . ID=gene:Rv1727;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1727;logic_name=ena Chromosome ena mRNA 1953270 1953839 . + . ID=transcript:Rv1727;Parent=gene:Rv1727;biotype=protein_coding;transcript_id=Rv1727 Chromosome ena exon 1953270 1953839 . + . Parent=transcript:Rv1727;Name=Rv1727-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1727-1;rank=1 Chromosome ena CDS 1953270 1953839 . + 0 ID=CDS:Rv1727;Parent=transcript:Rv1727;protein_id=Rv1727 ### -Chromosome ena gene 1953864 1954634 . - . ID=gene:Rv1728c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1728c;logic_name=ena +Chromosome ena gene 1953864 1954634 . - . ID=gene:Rv1728c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1728c;logic_name=ena Chromosome ena mRNA 1953864 1954634 . - . ID=transcript:Rv1728c;Parent=gene:Rv1728c;biotype=protein_coding;transcript_id=Rv1728c Chromosome ena exon 1953864 1954634 . - . Parent=transcript:Rv1728c;Name=Rv1728c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1728c-1;rank=1 Chromosome ena CDS 1953864 1954634 . - 0 ID=CDS:Rv1728c;Parent=transcript:Rv1728c;protein_id=Rv1728c ### -Chromosome ena gene 1954631 1955569 . - . ID=gene:Rv1729c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv1729c;logic_name=ena +Chromosome ena gene 1954631 1955569 . - . ID=gene:Rv1729c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv1729c;logic_name=ena Chromosome ena mRNA 1954631 1955569 . - . ID=transcript:Rv1729c;Parent=gene:Rv1729c;biotype=protein_coding;transcript_id=Rv1729c Chromosome ena exon 1954631 1955569 . - . Parent=transcript:Rv1729c;Name=Rv1729c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1729c-1;rank=1 Chromosome ena CDS 1954631 1955569 . - 0 ID=CDS:Rv1729c;Parent=transcript:Rv1729c;protein_id=Rv1729c ### -Chromosome ena gene 1955692 1957245 . - . ID=gene:Rv1730c;biotype=protein_coding;description=Possible penicillin-binding protein;gene_id=Rv1730c;logic_name=ena +Chromosome ena gene 1955692 1957245 . - . ID=gene:Rv1730c;biotype=protein_coding;description=Possible penicillin-binding protein;gene_id=Rv1730c;logic_name=ena Chromosome ena mRNA 1955692 1957245 . - . ID=transcript:Rv1730c;Parent=gene:Rv1730c;biotype=protein_coding;transcript_id=Rv1730c Chromosome ena exon 1955692 1957245 . - . Parent=transcript:Rv1730c;Name=Rv1730c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1730c-1;rank=1 Chromosome ena CDS 1955692 1957245 . - 0 ID=CDS:Rv1730c;Parent=transcript:Rv1730c;protein_id=Rv1730c ### -Chromosome ena gene 1957677 1959233 . + . ID=gene:Rv1731;Name=gabD2;biotype=protein_coding;description=Possible succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD2;gene_id=Rv1731;logic_name=ena +Chromosome ena gene 1957677 1959233 . + . ID=gene:Rv1731;Name=gabD2;biotype=protein_coding;description=Possible succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD2;gene_id=Rv1731;logic_name=ena Chromosome ena mRNA 1957677 1959233 . + . ID=transcript:Rv1731;Parent=gene:Rv1731;Name=gabD2-1;biotype=protein_coding;transcript_id=Rv1731 Chromosome ena exon 1957677 1959233 . + . Parent=transcript:Rv1731;Name=Rv1731-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1731-1;rank=1 Chromosome ena CDS 1957677 1959233 . + 0 ID=CDS:Rv1731;Parent=transcript:Rv1731;protein_id=Rv1731 ### -Chromosome ena gene 1959243 1959791 . - . ID=gene:Rv1732c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1732c;logic_name=ena +Chromosome ena gene 1959243 1959791 . - . ID=gene:Rv1732c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1732c;logic_name=ena Chromosome ena mRNA 1959243 1959791 . - . ID=transcript:Rv1732c;Parent=gene:Rv1732c;biotype=protein_coding;transcript_id=Rv1732c Chromosome ena exon 1959243 1959791 . - . Parent=transcript:Rv1732c;Name=Rv1732c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1732c-1;rank=1 Chromosome ena CDS 1959243 1959791 . - 0 ID=CDS:Rv1732c;Parent=transcript:Rv1732c;protein_id=Rv1732c ### -Chromosome ena gene 1959855 1960487 . - . ID=gene:Rv1733c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1733c;logic_name=ena +Chromosome ena gene 1959855 1960487 . - . ID=gene:Rv1733c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1733c;logic_name=ena Chromosome ena mRNA 1959855 1960487 . - . ID=transcript:Rv1733c;Parent=gene:Rv1733c;biotype=protein_coding;transcript_id=Rv1733c Chromosome ena exon 1959855 1960487 . - . Parent=transcript:Rv1733c;Name=Rv1733c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1733c-1;rank=1 Chromosome ena CDS 1959855 1960487 . - 0 ID=CDS:Rv1733c;Parent=transcript:Rv1733c;protein_id=Rv1733c @@ -9104,794 +9104,794 @@ Chromosome ena transcript 1960667 1960783 . + . ID=transcript:EBG00000313376;Par Chromosome ena exon 1960667 1960783 . + . Parent=transcript:EBG00000313376;Name=EBG00000313376;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313376;rank=1 ### Chromosome ena_gene biological_region 1960667 1960783 . + . external_name=AL123456.3:gene:1960667..1960783;logic_name=ena_gene -Chromosome ena gene 1960774 1961016 . - . ID=gene:Rv1734c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1734c;logic_name=ena +Chromosome ena gene 1960774 1961016 . - . ID=gene:Rv1734c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1734c;logic_name=ena Chromosome ena mRNA 1960774 1961016 . - . ID=transcript:Rv1734c;Parent=gene:Rv1734c;biotype=protein_coding;transcript_id=Rv1734c Chromosome ena exon 1960774 1961016 . - . Parent=transcript:Rv1734c;Name=Rv1734c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1734c-1;rank=1 Chromosome ena CDS 1960774 1961016 . - 0 ID=CDS:Rv1734c;Parent=transcript:Rv1734c;protein_id=Rv1734c ### -Chromosome ena gene 1961291 1961788 . - . ID=gene:Rv1735c;biotype=protein_coding;description=Hypothetical membrane protein;gene_id=Rv1735c;logic_name=ena +Chromosome ena gene 1961291 1961788 . - . ID=gene:Rv1735c;biotype=protein_coding;description=Hypothetical membrane protein;gene_id=Rv1735c;logic_name=ena Chromosome ena mRNA 1961291 1961788 . - . ID=transcript:Rv1735c;Parent=gene:Rv1735c;biotype=protein_coding;transcript_id=Rv1735c Chromosome ena exon 1961291 1961788 . - . Parent=transcript:Rv1735c;Name=Rv1735c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1735c-1;rank=1 Chromosome ena CDS 1961291 1961788 . - 0 ID=CDS:Rv1735c;Parent=transcript:Rv1735c;protein_id=Rv1735c ### -Chromosome ena gene 1962228 1964186 . - . ID=gene:Rv1736c;Name=narX;biotype=protein_coding;description=Probable nitrate reductase NarX;gene_id=Rv1736c;logic_name=ena +Chromosome ena gene 1962228 1964186 . - . ID=gene:Rv1736c;Name=narX;biotype=protein_coding;description=Probable nitrate reductase NarX;gene_id=Rv1736c;logic_name=ena Chromosome ena mRNA 1962228 1964186 . - . ID=transcript:Rv1736c;Parent=gene:Rv1736c;Name=narX-1;biotype=protein_coding;transcript_id=Rv1736c Chromosome ena exon 1962228 1964186 . - . Parent=transcript:Rv1736c;Name=Rv1736c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1736c-1;rank=1 Chromosome ena CDS 1962228 1964186 . - 0 ID=CDS:Rv1736c;Parent=transcript:Rv1736c;protein_id=Rv1736c ### -Chromosome ena gene 1964183 1965370 . - . ID=gene:Rv1737c;Name=narK2;biotype=protein_coding;description=Possible nitrate/nitrite transporter NarK2;gene_id=Rv1737c;logic_name=ena +Chromosome ena gene 1964183 1965370 . - . ID=gene:Rv1737c;Name=narK2;biotype=protein_coding;description=Possible nitrate/nitrite transporter NarK2;gene_id=Rv1737c;logic_name=ena Chromosome ena mRNA 1964183 1965370 . - . ID=transcript:Rv1737c;Parent=gene:Rv1737c;Name=narK2-1;biotype=protein_coding;transcript_id=Rv1737c Chromosome ena exon 1964183 1965370 . - . Parent=transcript:Rv1737c;Name=Rv1737c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1737c-1;rank=1 Chromosome ena CDS 1964183 1965370 . - 0 ID=CDS:Rv1737c;Parent=transcript:Rv1737c;protein_id=Rv1737c ### -Chromosome ena gene 1965657 1965941 . + . ID=gene:Rv1738;biotype=protein_coding;description=Conserved protein;gene_id=Rv1738;logic_name=ena +Chromosome ena gene 1965657 1965941 . + . ID=gene:Rv1738;biotype=protein_coding;description=Conserved protein;gene_id=Rv1738;logic_name=ena Chromosome ena mRNA 1965657 1965941 . + . ID=transcript:Rv1738;Parent=gene:Rv1738;biotype=protein_coding;transcript_id=Rv1738 Chromosome ena exon 1965657 1965941 . + . Parent=transcript:Rv1738;Name=Rv1738-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1738-1;rank=1 Chromosome ena CDS 1965657 1965941 . + 0 ID=CDS:Rv1738;Parent=transcript:Rv1738;protein_id=Rv1738 ### -Chromosome ena gene 1965955 1967637 . - . ID=gene:Rv1739c;biotype=protein_coding;description=Probable sulphate-transport transmembrane protein ABC transporter;gene_id=Rv1739c;logic_name=ena +Chromosome ena gene 1965955 1967637 . - . ID=gene:Rv1739c;biotype=protein_coding;description=Probable sulphate-transport transmembrane protein ABC transporter;gene_id=Rv1739c;logic_name=ena Chromosome ena mRNA 1965955 1967637 . - . ID=transcript:Rv1739c;Parent=gene:Rv1739c;biotype=protein_coding;transcript_id=Rv1739c Chromosome ena exon 1965955 1967637 . - . Parent=transcript:Rv1739c;Name=Rv1739c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1739c-1;rank=1 Chromosome ena CDS 1965955 1967637 . - 0 ID=CDS:Rv1739c;Parent=transcript:Rv1739c;protein_id=Rv1739c ### -Chromosome ena gene 1967705 1967917 . + . ID=gene:Rv1740;Name=vapB34;biotype=protein_coding;description=Possible antitoxin VapB34;gene_id=Rv1740;logic_name=ena +Chromosome ena gene 1967705 1967917 . + . ID=gene:Rv1740;Name=vapB34;biotype=protein_coding;description=Possible antitoxin VapB34;gene_id=Rv1740;logic_name=ena Chromosome ena mRNA 1967705 1967917 . + . ID=transcript:Rv1740;Parent=gene:Rv1740;Name=vapB34-1;biotype=protein_coding;transcript_id=Rv1740 Chromosome ena exon 1967705 1967917 . + . Parent=transcript:Rv1740;Name=Rv1740-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1740-1;rank=1 Chromosome ena CDS 1967705 1967917 . + 0 ID=CDS:Rv1740;Parent=transcript:Rv1740;protein_id=Rv1740 ### -Chromosome ena gene 1967917 1968165 . + . ID=gene:Rv1741;Name=vapC34;biotype=protein_coding;description=Possible toxin VapC34. Contains PIN domain.;gene_id=Rv1741;logic_name=ena +Chromosome ena gene 1967917 1968165 . + . ID=gene:Rv1741;Name=vapC34;biotype=protein_coding;description=Possible toxin VapC34. Contains PIN domain.;gene_id=Rv1741;logic_name=ena Chromosome ena mRNA 1967917 1968165 . + . ID=transcript:Rv1741;Parent=gene:Rv1741;Name=vapC34-1;biotype=protein_coding;transcript_id=Rv1741 Chromosome ena exon 1967917 1968165 . + . Parent=transcript:Rv1741;Name=Rv1741-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1741-1;rank=1 Chromosome ena CDS 1967917 1968165 . + 0 ID=CDS:Rv1741;Parent=transcript:Rv1741;protein_id=Rv1741 ### -Chromosome ena gene 1968173 1968910 . + . ID=gene:Rv1742;biotype=protein_coding;description=Unknown protein;gene_id=Rv1742;logic_name=ena +Chromosome ena gene 1968173 1968910 . + . ID=gene:Rv1742;biotype=protein_coding;description=Unknown protein;gene_id=Rv1742;logic_name=ena Chromosome ena mRNA 1968173 1968910 . + . ID=transcript:Rv1742;Parent=gene:Rv1742;biotype=protein_coding;transcript_id=Rv1742 Chromosome ena exon 1968173 1968910 . + . Parent=transcript:Rv1742;Name=Rv1742-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1742-1;rank=1 Chromosome ena CDS 1968173 1968910 . + 0 ID=CDS:Rv1742;Parent=transcript:Rv1742;protein_id=Rv1742 ### -Chromosome ena gene 1969004 1970704 . + . ID=gene:Rv1743;Name=pknE;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase E PknE (protein kinase E) (STPK E);gene_id=Rv1743;logic_name=ena +Chromosome ena gene 1969004 1970704 . + . ID=gene:Rv1743;Name=pknE;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase E PknE (protein kinase E) (STPK E);gene_id=Rv1743;logic_name=ena Chromosome ena mRNA 1969004 1970704 . + . ID=transcript:Rv1743;Parent=gene:Rv1743;Name=pknE-1;biotype=protein_coding;transcript_id=Rv1743 Chromosome ena exon 1969004 1970704 . + . Parent=transcript:Rv1743;Name=Rv1743-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1743-1;rank=1 Chromosome ena CDS 1969004 1970704 . + 0 ID=CDS:Rv1743;Parent=transcript:Rv1743;protein_id=Rv1743 ### -Chromosome ena gene 1970989 1971390 . - . ID=gene:Rv1744c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1744c;logic_name=ena +Chromosome ena gene 1970989 1971390 . - . ID=gene:Rv1744c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1744c;logic_name=ena Chromosome ena mRNA 1970989 1971390 . - . ID=transcript:Rv1744c;Parent=gene:Rv1744c;biotype=protein_coding;transcript_id=Rv1744c Chromosome ena exon 1970989 1971390 . - . Parent=transcript:Rv1744c;Name=Rv1744c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1744c-1;rank=1 Chromosome ena CDS 1970989 1971390 . - 0 ID=CDS:Rv1744c;Parent=transcript:Rv1744c;protein_id=Rv1744c ### -Chromosome ena gene 1971380 1971991 . - . ID=gene:Rv1745c;Name=idi;biotype=protein_coding;description=Probable isopentenyl-diphosphate delta-isomerase Idi (IPP isomerase) (isopentenyl pyrophosphate isomerase);gene_id=Rv1745c;logic_name=ena +Chromosome ena gene 1971380 1971991 . - . ID=gene:Rv1745c;Name=idi;biotype=protein_coding;description=Probable isopentenyl-diphosphate delta-isomerase Idi (IPP isomerase) (isopentenyl pyrophosphate isomerase);gene_id=Rv1745c;logic_name=ena Chromosome ena mRNA 1971380 1971991 . - . ID=transcript:Rv1745c;Parent=gene:Rv1745c;Name=idi-1;biotype=protein_coding;transcript_id=Rv1745c Chromosome ena exon 1971380 1971991 . - . Parent=transcript:Rv1745c;Name=Rv1745c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1745c-1;rank=1 Chromosome ena CDS 1971380 1971991 . - 0 ID=CDS:Rv1745c;Parent=transcript:Rv1745c;protein_id=Rv1745c ### -Chromosome ena gene 1972138 1973568 . + . ID=gene:Rv1746;Name=pknF;biotype=protein_coding;description=Anchored-membrane serine/threonine-protein kinase PknF (protein kinase F) (STPK F);gene_id=Rv1746;logic_name=ena +Chromosome ena gene 1972138 1973568 . + . ID=gene:Rv1746;Name=pknF;biotype=protein_coding;description=Anchored-membrane serine/threonine-protein kinase PknF (protein kinase F) (STPK F);gene_id=Rv1746;logic_name=ena Chromosome ena mRNA 1972138 1973568 . + . ID=transcript:Rv1746;Parent=gene:Rv1746;Name=pknF-1;biotype=protein_coding;transcript_id=Rv1746 Chromosome ena exon 1972138 1973568 . + . Parent=transcript:Rv1746;Name=Rv1746-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1746-1;rank=1 Chromosome ena CDS 1972138 1973568 . + 0 ID=CDS:Rv1746;Parent=transcript:Rv1746;protein_id=Rv1746 ### -Chromosome ena gene 1973630 1976227 . + . ID=gene:Rv1747;biotype=protein_coding;description=Probable conserved transmembrane ATP-binding protein ABC transporter;gene_id=Rv1747;logic_name=ena +Chromosome ena gene 1973630 1976227 . + . ID=gene:Rv1747;biotype=protein_coding;description=Probable conserved transmembrane ATP-binding protein ABC transporter;gene_id=Rv1747;logic_name=ena Chromosome ena mRNA 1973630 1976227 . + . ID=transcript:Rv1747;Parent=gene:Rv1747;biotype=protein_coding;transcript_id=Rv1747 Chromosome ena exon 1973630 1976227 . + . Parent=transcript:Rv1747;Name=Rv1747-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1747-1;rank=1 Chromosome ena CDS 1973630 1976227 . + 0 ID=CDS:Rv1747;Parent=transcript:Rv1747;protein_id=Rv1747 ### -Chromosome ena gene 1976600 1977331 . + . ID=gene:Rv1748;biotype=protein_coding;description=Unknown protein;gene_id=Rv1748;logic_name=ena +Chromosome ena gene 1976600 1977331 . + . ID=gene:Rv1748;biotype=protein_coding;description=Unknown protein;gene_id=Rv1748;logic_name=ena Chromosome ena mRNA 1976600 1977331 . + . ID=transcript:Rv1748;Parent=gene:Rv1748;biotype=protein_coding;transcript_id=Rv1748 Chromosome ena exon 1976600 1977331 . + . Parent=transcript:Rv1748;Name=Rv1748-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1748-1;rank=1 Chromosome ena CDS 1976600 1977331 . + 0 ID=CDS:Rv1748;Parent=transcript:Rv1748;protein_id=Rv1748 ### -Chromosome ena gene 1977328 1977885 . - . ID=gene:Rv1749c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv1749c;logic_name=ena +Chromosome ena gene 1977328 1977885 . - . ID=gene:Rv1749c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv1749c;logic_name=ena Chromosome ena mRNA 1977328 1977885 . - . ID=transcript:Rv1749c;Parent=gene:Rv1749c;biotype=protein_coding;transcript_id=Rv1749c Chromosome ena exon 1977328 1977885 . - . Parent=transcript:Rv1749c;Name=Rv1749c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1749c-1;rank=1 Chromosome ena CDS 1977328 1977885 . - 0 ID=CDS:Rv1749c;Parent=transcript:Rv1749c;protein_id=Rv1749c ### -Chromosome ena gene 1977969 1979567 . - . ID=gene:Rv1750c;Name=fadD1;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD1 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1750c;logic_name=ena +Chromosome ena gene 1977969 1979567 . - . ID=gene:Rv1750c;Name=fadD1;biotype=protein_coding;description=Possible fatty-acid-CoA ligase FadD1 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv1750c;logic_name=ena Chromosome ena mRNA 1977969 1979567 . - . ID=transcript:Rv1750c;Parent=gene:Rv1750c;Name=fadD1-1;biotype=protein_coding;transcript_id=Rv1750c Chromosome ena exon 1977969 1979567 . - . Parent=transcript:Rv1750c;Name=Rv1750c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1750c-1;rank=1 Chromosome ena CDS 1977969 1979567 . - 0 ID=CDS:Rv1750c;Parent=transcript:Rv1750c;protein_id=Rv1750c ### -Chromosome ena gene 1979621 1981003 . + . ID=gene:Rv1751;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1751;logic_name=ena +Chromosome ena gene 1979621 1981003 . + . ID=gene:Rv1751;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1751;logic_name=ena Chromosome ena mRNA 1979621 1981003 . + . ID=transcript:Rv1751;Parent=gene:Rv1751;biotype=protein_coding;transcript_id=Rv1751 Chromosome ena exon 1979621 1981003 . + . Parent=transcript:Rv1751;Name=Rv1751-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1751-1;rank=1 Chromosome ena CDS 1979621 1981003 . + 0 ID=CDS:Rv1751;Parent=transcript:Rv1751;protein_id=Rv1751 ### -Chromosome ena gene 1981130 1981579 . + . ID=gene:Rv1752;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1752;logic_name=ena +Chromosome ena gene 1981130 1981579 . + . ID=gene:Rv1752;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1752;logic_name=ena Chromosome ena mRNA 1981130 1981579 . + . ID=transcript:Rv1752;Parent=gene:Rv1752;biotype=protein_coding;transcript_id=Rv1752 Chromosome ena exon 1981130 1981579 . + . Parent=transcript:Rv1752;Name=Rv1752-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1752-1;rank=1 Chromosome ena CDS 1981130 1981579 . + 0 ID=CDS:Rv1752;Parent=transcript:Rv1752;protein_id=Rv1752 ### -Chromosome ena gene 1981614 1984775 . - . ID=gene:Rv1753c;Name=PPE24;biotype=protein_coding;description=PPE family protein PPE24;gene_id=Rv1753c;logic_name=ena +Chromosome ena gene 1981614 1984775 . - . ID=gene:Rv1753c;Name=PPE24;biotype=protein_coding;description=PPE family protein PPE24;gene_id=Rv1753c;logic_name=ena Chromosome ena mRNA 1981614 1984775 . - . ID=transcript:Rv1753c;Parent=gene:Rv1753c;Name=PPE24-1;biotype=protein_coding;transcript_id=Rv1753c Chromosome ena exon 1981614 1984775 . - . Parent=transcript:Rv1753c;Name=Rv1753c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1753c-1;rank=1 Chromosome ena CDS 1981614 1984775 . - 0 ID=CDS:Rv1753c;Parent=transcript:Rv1753c;protein_id=Rv1753c ### -Chromosome ena gene 1984979 1986670 . - . ID=gene:Rv1754c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1754c;logic_name=ena +Chromosome ena gene 1984979 1986670 . - . ID=gene:Rv1754c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1754c;logic_name=ena Chromosome ena mRNA 1984979 1986670 . - . ID=transcript:Rv1754c;Parent=gene:Rv1754c;biotype=protein_coding;transcript_id=Rv1754c Chromosome ena exon 1984979 1986670 . - . Parent=transcript:Rv1754c;Name=Rv1754c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1754c-1;rank=1 Chromosome ena CDS 1984979 1986670 . - 0 ID=CDS:Rv1754c;Parent=transcript:Rv1754c;protein_id=Rv1754c ### -Chromosome ena gene 1986854 1987696 . - . ID=gene:Rv1755c;Name=plcD;biotype=protein_coding;description=Probable phospholipase C 4 (fragment) PlcD;gene_id=Rv1755c;logic_name=ena +Chromosome ena gene 1986854 1987696 . - . ID=gene:Rv1755c;Name=plcD;biotype=protein_coding;description=Probable phospholipase C 4 (fragment) PlcD;gene_id=Rv1755c;logic_name=ena Chromosome ena mRNA 1986854 1987696 . - . ID=transcript:Rv1755c;Parent=gene:Rv1755c;Name=plcD-1;biotype=protein_coding;transcript_id=Rv1755c Chromosome ena exon 1986854 1987696 . - . Parent=transcript:Rv1755c;Name=Rv1755c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1755c-1;rank=1 Chromosome ena CDS 1986854 1987696 . - 0 ID=CDS:Rv1755c;Parent=transcript:Rv1755c;protein_id=Rv1755c ### -Chromosome ena_mobile_element biological_region 1987703 1989057 . - . external_name=IS6110-3%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 1987745 1988731 . - . ID=gene:Rv1756c;biotype=protein_coding;description=Putative transposase;gene_id=Rv1756c;logic_name=ena +Chromosome ena_mobile_element biological_region 1987703 1989057 . - . external_name=IS6110-3%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 1987745 1988731 . - . ID=gene:Rv1756c;biotype=protein_coding;description=Putative transposase;gene_id=Rv1756c;logic_name=ena Chromosome ena mRNA 1987745 1988731 . - . ID=transcript:Rv1756c;Parent=gene:Rv1756c;biotype=protein_coding;transcript_id=Rv1756c Chromosome ena exon 1987745 1988731 . - . Parent=transcript:Rv1756c;Name=Rv1756c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1756c-1;rank=1 Chromosome ena CDS 1987745 1988731 . - 0 ID=CDS:Rv1756c;Parent=transcript:Rv1756c;protein_id=Rv1756c ### -Chromosome ena gene 1988680 1989006 . - . ID=gene:Rv1757c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1757c;logic_name=ena +Chromosome ena gene 1988680 1989006 . - . ID=gene:Rv1757c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1757c;logic_name=ena Chromosome ena mRNA 1988680 1989006 . - . ID=transcript:Rv1757c;Parent=gene:Rv1757c;biotype=protein_coding;transcript_id=Rv1757c Chromosome ena exon 1988680 1989006 . - . Parent=transcript:Rv1757c;Name=Rv1757c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1757c-1;rank=1 Chromosome ena CDS 1988680 1989006 . - 0 ID=CDS:Rv1757c;Parent=transcript:Rv1757c;protein_id=Rv1757c ### -Chromosome ena gene 1989042 1989566 . + . ID=gene:Rv1758;Name=cut1;biotype=protein_coding;description=Probable cutinase Cut1;gene_id=Rv1758;logic_name=ena +Chromosome ena gene 1989042 1989566 . + . ID=gene:Rv1758;Name=cut1;biotype=protein_coding;description=Probable cutinase Cut1;gene_id=Rv1758;logic_name=ena Chromosome ena mRNA 1989042 1989566 . + . ID=transcript:Rv1758;Parent=gene:Rv1758;Name=cut1-1;biotype=protein_coding;transcript_id=Rv1758 Chromosome ena exon 1989042 1989566 . + . Parent=transcript:Rv1758;Name=Rv1758-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1758-1;rank=1 Chromosome ena CDS 1989042 1989566 . + 0 ID=CDS:Rv1758;Parent=transcript:Rv1758;protein_id=Rv1758 ### -Chromosome ena gene 1989833 1992577 . - . ID=gene:Rv1759c;Name=wag22;biotype=protein_coding;description=PE-PGRS family protein Wag22;gene_id=Rv1759c;logic_name=ena +Chromosome ena gene 1989833 1992577 . - . ID=gene:Rv1759c;Name=wag22;biotype=protein_coding;description=PE-PGRS family protein Wag22;gene_id=Rv1759c;logic_name=ena Chromosome ena mRNA 1989833 1992577 . - . ID=transcript:Rv1759c;Parent=gene:Rv1759c;Name=wag22-1;biotype=protein_coding;transcript_id=Rv1759c Chromosome ena exon 1989833 1992577 . - . Parent=transcript:Rv1759c;Name=Rv1759c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1759c-1;rank=1 Chromosome ena CDS 1989833 1992577 . - 0 ID=CDS:Rv1759c;Parent=transcript:Rv1759c;protein_id=Rv1759c ### -Chromosome ena gene 1993153 1994661 . + . ID=gene:Rv1760;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv1760;logic_name=ena +Chromosome ena gene 1993153 1994661 . + . ID=gene:Rv1760;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv1760;logic_name=ena Chromosome ena mRNA 1993153 1994661 . + . ID=transcript:Rv1760;Parent=gene:Rv1760;biotype=protein_coding;transcript_id=Rv1760 Chromosome ena exon 1993153 1994661 . + . Parent=transcript:Rv1760;Name=Rv1760-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1760-1;rank=1 Chromosome ena CDS 1993153 1994661 . + 0 ID=CDS:Rv1760;Parent=transcript:Rv1760;protein_id=Rv1760 ### -Chromosome ena gene 1994671 1995054 . - . ID=gene:Rv1761c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1761c;logic_name=ena +Chromosome ena gene 1994671 1995054 . - . ID=gene:Rv1761c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv1761c;logic_name=ena Chromosome ena mRNA 1994671 1995054 . - . ID=transcript:Rv1761c;Parent=gene:Rv1761c;biotype=protein_coding;transcript_id=Rv1761c Chromosome ena exon 1994671 1995054 . - . Parent=transcript:Rv1761c;Name=Rv1761c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1761c-1;rank=1 Chromosome ena CDS 1994671 1995054 . - 0 ID=CDS:Rv1761c;Parent=transcript:Rv1761c;protein_id=Rv1761c ### -Chromosome ena gene 1995054 1995842 . - . ID=gene:Rv1762c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1762c;logic_name=ena +Chromosome ena gene 1995054 1995842 . - . ID=gene:Rv1762c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1762c;logic_name=ena Chromosome ena mRNA 1995054 1995842 . - . ID=transcript:Rv1762c;Parent=gene:Rv1762c;biotype=protein_coding;transcript_id=Rv1762c Chromosome ena exon 1995054 1995842 . - . Parent=transcript:Rv1762c;Name=Rv1762c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1762c-1;rank=1 Chromosome ena CDS 1995054 1995842 . - 0 ID=CDS:Rv1762c;Parent=transcript:Rv1762c;protein_id=Rv1762c ### -Chromosome ena_mobile_element biological_region 1996101 1997455 . + . external_name=IS6110-4%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 1996152 1996478 . + . ID=gene:Rv1763;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1763;logic_name=ena +Chromosome ena_mobile_element biological_region 1996101 1997455 . + . external_name=IS6110-4%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 1996152 1996478 . + . ID=gene:Rv1763;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv1763;logic_name=ena Chromosome ena mRNA 1996152 1996478 . + . ID=transcript:Rv1763;Parent=gene:Rv1763;biotype=protein_coding;transcript_id=Rv1763 Chromosome ena exon 1996152 1996478 . + . Parent=transcript:Rv1763;Name=Rv1763-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1763-1;rank=1 Chromosome ena CDS 1996152 1996478 . + 0 ID=CDS:Rv1763;Parent=transcript:Rv1763;protein_id=Rv1763 ### -Chromosome ena gene 1996427 1997413 . + . ID=gene:Rv1764;biotype=protein_coding;description=Putative transposase;gene_id=Rv1764;logic_name=ena +Chromosome ena gene 1996427 1997413 . + . ID=gene:Rv1764;biotype=protein_coding;description=Putative transposase;gene_id=Rv1764;logic_name=ena Chromosome ena mRNA 1996427 1997413 . + . ID=transcript:Rv1764;Parent=gene:Rv1764;biotype=protein_coding;transcript_id=Rv1764 Chromosome ena exon 1996427 1997413 . + . Parent=transcript:Rv1764;Name=Rv1764-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1764-1;rank=1 Chromosome ena CDS 1996427 1997413 . + 0 ID=CDS:Rv1764;Parent=transcript:Rv1764;protein_id=Rv1764 ### -Chromosome ena gene 1997418 1998515 . - . ID=gene:Rv1765c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1765c;logic_name=ena +Chromosome ena gene 1997418 1998515 . - . ID=gene:Rv1765c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1765c;logic_name=ena Chromosome ena mRNA 1997418 1998515 . - . ID=transcript:Rv1765c;Parent=gene:Rv1765c;biotype=protein_coding;transcript_id=Rv1765c Chromosome ena exon 1997418 1998515 . - . Parent=transcript:Rv1765c;Name=Rv1765c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1765c-1;rank=1 Chromosome ena CDS 1997418 1998515 . - 0 ID=CDS:Rv1765c;Parent=transcript:Rv1765c;protein_id=Rv1765c ### -Chromosome ena_mobile_element biological_region 1998584 1999813 . - . external_name=ISB9'%2C len: 1230 nt. Insertion sequence ISB9%2C nearly identical to EM_BA:MTU78639. Note that this sequence shows several differences to EM_BA: MTU78639%2C and the transposase ORFs are extensively frameshifted. Our sequence has been checked and is thought ...;logic_name=ena_mobile_element -Chromosome ena gene 1999142 1999357 . - . ID=gene:Rv1765A;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv1765A;logic_name=ena +Chromosome ena_mobile_element biological_region 1998584 1999813 . - . external_name=ISB9'%2C len: 1230 nt. Insertion sequence ISB9%2C nearly identical to EM_BA:MTU78639. Note that this sequence shows several differences to EM_BA: MTU78639%2C and the transposase ORFs are extensively frameshifted. Our sequence has been checked and is thought ...;logic_name=ena_mobile_element +Chromosome ena gene 1999142 1999357 . - . ID=gene:Rv1765A;biotype=protein_coding;description=Putative transposase (fragment);gene_id=Rv1765A;logic_name=ena Chromosome ena mRNA 1999142 1999357 . - . ID=transcript:Rv1765A;Parent=gene:Rv1765A;biotype=protein_coding;transcript_id=Rv1765A Chromosome ena exon 1999142 1999357 . - . Parent=transcript:Rv1765A;Name=Rv1765A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1765A-1;rank=1 Chromosome ena CDS 1999142 1999357 . - 0 ID=CDS:Rv1765A;Parent=transcript:Rv1765A;protein_id=Rv1765A ### -Chromosome ena gene 1999737 2000006 . + . ID=gene:Rv1766;biotype=protein_coding;description=Conserved protein;gene_id=Rv1766;logic_name=ena +Chromosome ena gene 1999737 2000006 . + . ID=gene:Rv1766;biotype=protein_coding;description=Conserved protein;gene_id=Rv1766;logic_name=ena Chromosome ena mRNA 1999737 2000006 . + . ID=transcript:Rv1766;Parent=gene:Rv1766;biotype=protein_coding;transcript_id=Rv1766 Chromosome ena exon 1999737 2000006 . + . Parent=transcript:Rv1766;Name=Rv1766-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1766-1;rank=1 Chromosome ena CDS 1999737 2000006 . + 0 ID=CDS:Rv1766;Parent=transcript:Rv1766;protein_id=Rv1766 ### -Chromosome ena gene 2000074 2000433 . + . ID=gene:Rv1767;biotype=protein_coding;description=Conserved protein;gene_id=Rv1767;logic_name=ena +Chromosome ena gene 2000074 2000433 . + . ID=gene:Rv1767;biotype=protein_coding;description=Conserved protein;gene_id=Rv1767;logic_name=ena Chromosome ena mRNA 2000074 2000433 . + . ID=transcript:Rv1767;Parent=gene:Rv1767;biotype=protein_coding;transcript_id=Rv1767 Chromosome ena exon 2000074 2000433 . + . Parent=transcript:Rv1767;Name=Rv1767-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1767-1;rank=1 Chromosome ena CDS 2000074 2000433 . + 0 ID=CDS:Rv1767;Parent=transcript:Rv1767;protein_id=Rv1767 ### -Chromosome ena gene 2000614 2002470 . + . ID=gene:Rv1768;Name=PE_PGRS31;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS31;gene_id=Rv1768;logic_name=ena +Chromosome ena gene 2000614 2002470 . + . ID=gene:Rv1768;Name=PE_PGRS31;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS31;gene_id=Rv1768;logic_name=ena Chromosome ena mRNA 2000614 2002470 . + . ID=transcript:Rv1768;Parent=gene:Rv1768;Name=PE_PGRS31-1;biotype=protein_coding;transcript_id=Rv1768 Chromosome ena exon 2000614 2002470 . + . Parent=transcript:Rv1768;Name=Rv1768-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1768-1;rank=1 Chromosome ena CDS 2000614 2002470 . + 0 ID=CDS:Rv1768;Parent=transcript:Rv1768;protein_id=Rv1768 ### -Chromosome ena gene 2002626 2003870 . + . ID=gene:Rv1769;biotype=protein_coding;description=Conserved protein;gene_id=Rv1769;logic_name=ena +Chromosome ena gene 2002626 2003870 . + . ID=gene:Rv1769;biotype=protein_coding;description=Conserved protein;gene_id=Rv1769;logic_name=ena Chromosome ena mRNA 2002626 2003870 . + . ID=transcript:Rv1769;Parent=gene:Rv1769;biotype=protein_coding;transcript_id=Rv1769 Chromosome ena exon 2002626 2003870 . + . Parent=transcript:Rv1769;Name=Rv1769-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1769-1;rank=1 Chromosome ena CDS 2002626 2003870 . + 0 ID=CDS:Rv1769;Parent=transcript:Rv1769;protein_id=Rv1769 ### -Chromosome ena gene 2003878 2005164 . + . ID=gene:Rv1770;biotype=protein_coding;description=Conserved protein;gene_id=Rv1770;logic_name=ena +Chromosome ena gene 2003878 2005164 . + . ID=gene:Rv1770;biotype=protein_coding;description=Conserved protein;gene_id=Rv1770;logic_name=ena Chromosome ena mRNA 2003878 2005164 . + . ID=transcript:Rv1770;Parent=gene:Rv1770;biotype=protein_coding;transcript_id=Rv1770 Chromosome ena exon 2003878 2005164 . + . Parent=transcript:Rv1770;Name=Rv1770-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1770-1;rank=1 Chromosome ena CDS 2003878 2005164 . + 0 ID=CDS:Rv1770;Parent=transcript:Rv1770;protein_id=Rv1770 ### -Chromosome ena gene 2005161 2006447 . + . ID=gene:Rv1771;biotype=protein_coding;description=L-gulono-1%2C4-lactone dehydrogenase;gene_id=Rv1771;logic_name=ena +Chromosome ena gene 2005161 2006447 . + . ID=gene:Rv1771;biotype=protein_coding;description=L-gulono-1%2C4-lactone dehydrogenase;gene_id=Rv1771;logic_name=ena Chromosome ena mRNA 2005161 2006447 . + . ID=transcript:Rv1771;Parent=gene:Rv1771;biotype=protein_coding;transcript_id=Rv1771 Chromosome ena exon 2005161 2006447 . + . Parent=transcript:Rv1771;Name=Rv1771-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1771-1;rank=1 Chromosome ena CDS 2005161 2006447 . + 0 ID=CDS:Rv1771;Parent=transcript:Rv1771;protein_id=Rv1771 ### -Chromosome ena gene 2006636 2006947 . + . ID=gene:Rv1772;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1772;logic_name=ena +Chromosome ena gene 2006636 2006947 . + . ID=gene:Rv1772;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1772;logic_name=ena Chromosome ena mRNA 2006636 2006947 . + . ID=transcript:Rv1772;Parent=gene:Rv1772;biotype=protein_coding;transcript_id=Rv1772 Chromosome ena exon 2006636 2006947 . + . Parent=transcript:Rv1772;Name=Rv1772-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1772-1;rank=1 Chromosome ena CDS 2006636 2006947 . + 0 ID=CDS:Rv1772;Parent=transcript:Rv1772;protein_id=Rv1772 ### -Chromosome ena gene 2007020 2007766 . - . ID=gene:Rv1773c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1773c;logic_name=ena +Chromosome ena gene 2007020 2007766 . - . ID=gene:Rv1773c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1773c;logic_name=ena Chromosome ena mRNA 2007020 2007766 . - . ID=transcript:Rv1773c;Parent=gene:Rv1773c;biotype=protein_coding;transcript_id=Rv1773c Chromosome ena exon 2007020 2007766 . - . Parent=transcript:Rv1773c;Name=Rv1773c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1773c-1;rank=1 Chromosome ena CDS 2007020 2007766 . - 0 ID=CDS:Rv1773c;Parent=transcript:Rv1773c;protein_id=Rv1773c ### -Chromosome ena gene 2007832 2009172 . + . ID=gene:Rv1774;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1774;logic_name=ena +Chromosome ena gene 2007832 2009172 . + . ID=gene:Rv1774;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1774;logic_name=ena Chromosome ena mRNA 2007832 2009172 . + . ID=transcript:Rv1774;Parent=gene:Rv1774;biotype=protein_coding;transcript_id=Rv1774 Chromosome ena exon 2007832 2009172 . + . Parent=transcript:Rv1774;Name=Rv1774-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1774-1;rank=1 Chromosome ena CDS 2007832 2009172 . + 0 ID=CDS:Rv1774;Parent=transcript:Rv1774;protein_id=Rv1774 ### -Chromosome ena gene 2009172 2009990 . + . ID=gene:Rv1775;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1775;logic_name=ena +Chromosome ena gene 2009172 2009990 . + . ID=gene:Rv1775;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1775;logic_name=ena Chromosome ena mRNA 2009172 2009990 . + . ID=transcript:Rv1775;Parent=gene:Rv1775;biotype=protein_coding;transcript_id=Rv1775 Chromosome ena exon 2009172 2009990 . + . Parent=transcript:Rv1775;Name=Rv1775-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1775-1;rank=1 Chromosome ena CDS 2009172 2009990 . + 0 ID=CDS:Rv1775;Parent=transcript:Rv1775;protein_id=Rv1775 ### -Chromosome ena gene 2009995 2010555 . - . ID=gene:Rv1776c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1776c;logic_name=ena +Chromosome ena gene 2009995 2010555 . - . ID=gene:Rv1776c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1776c;logic_name=ena Chromosome ena mRNA 2009995 2010555 . - . ID=transcript:Rv1776c;Parent=gene:Rv1776c;biotype=protein_coding;transcript_id=Rv1776c Chromosome ena exon 2009995 2010555 . - . Parent=transcript:Rv1776c;Name=Rv1776c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1776c-1;rank=1 Chromosome ena CDS 2009995 2010555 . - 0 ID=CDS:Rv1776c;Parent=transcript:Rv1776c;protein_id=Rv1776c ### -Chromosome ena gene 2010656 2011960 . + . ID=gene:Rv1777;Name=cyp144;biotype=protein_coding;description=Probable cytochrome P450 144 Cyp144;gene_id=Rv1777;logic_name=ena +Chromosome ena gene 2010656 2011960 . + . ID=gene:Rv1777;Name=cyp144;biotype=protein_coding;description=Probable cytochrome P450 144 Cyp144;gene_id=Rv1777;logic_name=ena Chromosome ena mRNA 2010656 2011960 . + . ID=transcript:Rv1777;Parent=gene:Rv1777;Name=cyp144-1;biotype=protein_coding;transcript_id=Rv1777 Chromosome ena exon 2010656 2011960 . + . Parent=transcript:Rv1777;Name=Rv1777-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1777-1;rank=1 Chromosome ena CDS 2010656 2011960 . + 0 ID=CDS:Rv1777;Parent=transcript:Rv1777;protein_id=Rv1777 ### -Chromosome ena gene 2012081 2012530 . - . ID=gene:Rv1778c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1778c;logic_name=ena +Chromosome ena gene 2012081 2012530 . - . ID=gene:Rv1778c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1778c;logic_name=ena Chromosome ena mRNA 2012081 2012530 . - . ID=transcript:Rv1778c;Parent=gene:Rv1778c;biotype=protein_coding;transcript_id=Rv1778c Chromosome ena exon 2012081 2012530 . - . Parent=transcript:Rv1778c;Name=Rv1778c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1778c-1;rank=1 Chromosome ena CDS 2012081 2012530 . - 0 ID=CDS:Rv1778c;Parent=transcript:Rv1778c;protein_id=Rv1778c ### -Chromosome ena gene 2012686 2014479 . - . ID=gene:Rv1779c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv1779c;logic_name=ena +Chromosome ena gene 2012686 2014479 . - . ID=gene:Rv1779c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv1779c;logic_name=ena Chromosome ena mRNA 2012686 2014479 . - . ID=transcript:Rv1779c;Parent=gene:Rv1779c;biotype=protein_coding;transcript_id=Rv1779c Chromosome ena exon 2012686 2014479 . - . Parent=transcript:Rv1779c;Name=Rv1779c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1779c-1;rank=1 Chromosome ena CDS 2012686 2014479 . - 0 ID=CDS:Rv1779c;Parent=transcript:Rv1779c;protein_id=Rv1779c ### -Chromosome ena gene 2014699 2015262 . + . ID=gene:Rv1780;biotype=protein_coding;description=Conserved protein;gene_id=Rv1780;logic_name=ena +Chromosome ena gene 2014699 2015262 . + . ID=gene:Rv1780;biotype=protein_coding;description=Conserved protein;gene_id=Rv1780;logic_name=ena Chromosome ena mRNA 2014699 2015262 . + . ID=transcript:Rv1780;Parent=gene:Rv1780;biotype=protein_coding;transcript_id=Rv1780 Chromosome ena exon 2014699 2015262 . + . Parent=transcript:Rv1780;Name=Rv1780-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1780-1;rank=1 Chromosome ena CDS 2014699 2015262 . + 0 ID=CDS:Rv1780;Parent=transcript:Rv1780;protein_id=Rv1780 ### -Chromosome ena gene 2015302 2017476 . - . ID=gene:Rv1781c;Name=malQ;biotype=protein_coding;description=Probable 4-alpha-glucanotransferase MalQ (amylomaltase) (disproportionating enzyme) (D-enzyme);gene_id=Rv1781c;logic_name=ena +Chromosome ena gene 2015302 2017476 . - . ID=gene:Rv1781c;Name=malQ;biotype=protein_coding;description=Probable 4-alpha-glucanotransferase MalQ (amylomaltase) (disproportionating enzyme) (D-enzyme);gene_id=Rv1781c;logic_name=ena Chromosome ena mRNA 2015302 2017476 . - . ID=transcript:Rv1781c;Parent=gene:Rv1781c;Name=malQ-1;biotype=protein_coding;transcript_id=Rv1781c Chromosome ena exon 2015302 2017476 . - . Parent=transcript:Rv1781c;Name=Rv1781c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1781c-1;rank=1 Chromosome ena CDS 2015302 2017476 . - 0 ID=CDS:Rv1781c;Parent=transcript:Rv1781c;protein_id=Rv1781c ### -Chromosome ena gene 2017740 2019260 . + . ID=gene:Rv1782;Name=eccB5;biotype=protein_coding;description=ESX conserved component EccB5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1782;logic_name=ena +Chromosome ena gene 2017740 2019260 . + . ID=gene:Rv1782;Name=eccB5;biotype=protein_coding;description=ESX conserved component EccB5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1782;logic_name=ena Chromosome ena mRNA 2017740 2019260 . + . ID=transcript:Rv1782;Parent=gene:Rv1782;Name=eccB5-1;biotype=protein_coding;transcript_id=Rv1782 Chromosome ena exon 2017740 2019260 . + . Parent=transcript:Rv1782;Name=Rv1782-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1782-1;rank=1 Chromosome ena CDS 2017740 2019260 . + 0 ID=CDS:Rv1782;Parent=transcript:Rv1782;protein_id=Rv1782 ### -Chromosome ena gene 2019257 2023432 . + . ID=gene:Rv1783;Name=eccC5;biotype=protein_coding;description=ESX conserved component EccC5. ESX-5 type VII secretion system protein.;gene_id=Rv1783;logic_name=ena +Chromosome ena gene 2019257 2023432 . + . ID=gene:Rv1783;Name=eccC5;biotype=protein_coding;description=ESX conserved component EccC5. ESX-5 type VII secretion system protein.;gene_id=Rv1783;logic_name=ena Chromosome ena mRNA 2019257 2023432 . + . ID=transcript:Rv1783;Parent=gene:Rv1783;Name=eccC5-1;biotype=protein_coding;transcript_id=Rv1783 Chromosome ena exon 2019257 2023432 . + . Parent=transcript:Rv1783;Name=Rv1783-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1783-1;rank=1 Chromosome ena CDS 2019257 2023432 . + 0 ID=CDS:Rv1783;Parent=transcript:Rv1783;protein_id=Rv1783 ### -Chromosome ena gene 2023447 2024628 . - . ID=gene:Rv1785c;Name=cyp143;biotype=protein_coding;description=Probable cytochrome P450 143 Cyp143;gene_id=Rv1785c;logic_name=ena +Chromosome ena gene 2023447 2024628 . - . ID=gene:Rv1785c;Name=cyp143;biotype=protein_coding;description=Probable cytochrome P450 143 Cyp143;gene_id=Rv1785c;logic_name=ena Chromosome ena mRNA 2023447 2024628 . - . ID=transcript:Rv1785c;Parent=gene:Rv1785c;Name=cyp143-1;biotype=protein_coding;transcript_id=Rv1785c Chromosome ena exon 2023447 2024628 . - . Parent=transcript:Rv1785c;Name=Rv1785c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1785c-1;rank=1 Chromosome ena CDS 2023447 2024628 . - 0 ID=CDS:Rv1785c;Parent=transcript:Rv1785c;protein_id=Rv1785c ### -Chromosome ena gene 2024828 2025031 . + . ID=gene:Rv1786;biotype=protein_coding;description=Probable ferredoxin;gene_id=Rv1786;logic_name=ena +Chromosome ena gene 2024828 2025031 . + . ID=gene:Rv1786;biotype=protein_coding;description=Probable ferredoxin;gene_id=Rv1786;logic_name=ena Chromosome ena mRNA 2024828 2025031 . + . ID=transcript:Rv1786;Parent=gene:Rv1786;biotype=protein_coding;transcript_id=Rv1786 Chromosome ena exon 2024828 2025031 . + . Parent=transcript:Rv1786;Name=Rv1786-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1786-1;rank=1 Chromosome ena CDS 2024828 2025031 . + 0 ID=CDS:Rv1786;Parent=transcript:Rv1786;protein_id=Rv1786 ### -Chromosome ena gene 2025301 2026398 . + . ID=gene:Rv1787;Name=PPE25;biotype=protein_coding;description=PPE family protein PPE25;gene_id=Rv1787;logic_name=ena +Chromosome ena gene 2025301 2026398 . + . ID=gene:Rv1787;Name=PPE25;biotype=protein_coding;description=PPE family protein PPE25;gene_id=Rv1787;logic_name=ena Chromosome ena mRNA 2025301 2026398 . + . ID=transcript:Rv1787;Parent=gene:Rv1787;Name=PPE25-1;biotype=protein_coding;transcript_id=Rv1787 Chromosome ena exon 2025301 2026398 . + . Parent=transcript:Rv1787;Name=Rv1787-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1787-1;rank=1 Chromosome ena CDS 2025301 2026398 . + 0 ID=CDS:Rv1787;Parent=transcript:Rv1787;protein_id=Rv1787 ### -Chromosome ena gene 2026477 2026776 . + . ID=gene:Rv1788;Name=PE18;biotype=protein_coding;description=PE family protein PE18;gene_id=Rv1788;logic_name=ena +Chromosome ena gene 2026477 2026776 . + . ID=gene:Rv1788;Name=PE18;biotype=protein_coding;description=PE family protein PE18;gene_id=Rv1788;logic_name=ena Chromosome ena mRNA 2026477 2026776 . + . ID=transcript:Rv1788;Parent=gene:Rv1788;Name=PE18-1;biotype=protein_coding;transcript_id=Rv1788 Chromosome ena exon 2026477 2026776 . + . Parent=transcript:Rv1788;Name=Rv1788-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1788-1;rank=1 Chromosome ena CDS 2026477 2026776 . + 0 ID=CDS:Rv1788;Parent=transcript:Rv1788;protein_id=Rv1788 ### -Chromosome ena gene 2026790 2027971 . + . ID=gene:Rv1789;Name=PPE26;biotype=protein_coding;description=PPE family protein PPE26;gene_id=Rv1789;logic_name=ena +Chromosome ena gene 2026790 2027971 . + . ID=gene:Rv1789;Name=PPE26;biotype=protein_coding;description=PPE family protein PPE26;gene_id=Rv1789;logic_name=ena Chromosome ena mRNA 2026790 2027971 . + . ID=transcript:Rv1789;Parent=gene:Rv1789;Name=PPE26-1;biotype=protein_coding;transcript_id=Rv1789 Chromosome ena exon 2026790 2027971 . + . Parent=transcript:Rv1789;Name=Rv1789-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1789-1;rank=1 Chromosome ena CDS 2026790 2027971 . + 0 ID=CDS:Rv1789;Parent=transcript:Rv1789;protein_id=Rv1789 ### -Chromosome ena gene 2028425 2029477 . + . ID=gene:Rv1790;Name=PPE27;biotype=protein_coding;description=PPE family protein PPE27;gene_id=Rv1790;logic_name=ena +Chromosome ena gene 2028425 2029477 . + . ID=gene:Rv1790;Name=PPE27;biotype=protein_coding;description=PPE family protein PPE27;gene_id=Rv1790;logic_name=ena Chromosome ena mRNA 2028425 2029477 . + . ID=transcript:Rv1790;Parent=gene:Rv1790;Name=PPE27-1;biotype=protein_coding;transcript_id=Rv1790 Chromosome ena exon 2028425 2029477 . + . Parent=transcript:Rv1790;Name=Rv1790-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1790-1;rank=1 Chromosome ena CDS 2028425 2029477 . + 0 ID=CDS:Rv1790;Parent=transcript:Rv1790;protein_id=Rv1790 ### -Chromosome ena gene 2029904 2030203 . + . ID=gene:Rv1791;Name=PE19;biotype=protein_coding;description=PE family protein PE19;gene_id=Rv1791;logic_name=ena +Chromosome ena gene 2029904 2030203 . + . ID=gene:Rv1791;Name=PE19;biotype=protein_coding;description=PE family protein PE19;gene_id=Rv1791;logic_name=ena Chromosome ena mRNA 2029904 2030203 . + . ID=transcript:Rv1791;Parent=gene:Rv1791;Name=PE19-1;biotype=protein_coding;transcript_id=Rv1791 Chromosome ena exon 2029904 2030203 . + . Parent=transcript:Rv1791;Name=Rv1791-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1791-1;rank=1 Chromosome ena CDS 2029904 2030203 . + 0 ID=CDS:Rv1791;Parent=transcript:Rv1791;protein_id=Rv1791 ### -Chromosome ena pseudogene 2030347 2030643 . + . ID=gene:Rv1792;Name=esxM;biotype=pseudogene;description=ESAT-6 like protein EsxM;gene_id=Rv1792;logic_name=ena +Chromosome ena pseudogene 2030347 2030643 . + . ID=gene:Rv1792;Name=esxM;biotype=pseudogene;description=ESAT-6 like protein EsxM;gene_id=Rv1792;logic_name=ena Chromosome ena pseudogene 2030347 2030643 . + . ID=transcript:Rv1792;Parent=gene:Rv1792;Name=esxM-1;biotype=pseudogene;transcript_id=Rv1792 Chromosome ena exon 2030347 2030643 . + . Parent=transcript:Rv1792;Name=Rv1792-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1792-1;rank=1 ### -Chromosome ena gene 2030694 2030978 . + . ID=gene:Rv1793;Name=esxN;biotype=protein_coding;description=Putative ESAT-6 like protein EsxN (ESAT-6 like protein 5);gene_id=Rv1793;logic_name=ena +Chromosome ena gene 2030694 2030978 . + . ID=gene:Rv1793;Name=esxN;biotype=protein_coding;description=Putative ESAT-6 like protein EsxN (ESAT-6 like protein 5);gene_id=Rv1793;logic_name=ena Chromosome ena mRNA 2030694 2030978 . + . ID=transcript:Rv1793;Parent=gene:Rv1793;Name=esxN-1;biotype=protein_coding;transcript_id=Rv1793 Chromosome ena exon 2030694 2030978 . + . Parent=transcript:Rv1793;Name=Rv1793-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1793-1;rank=1 Chromosome ena CDS 2030694 2030978 . + 0 ID=CDS:Rv1793;Parent=transcript:Rv1793;protein_id=Rv1793 ### -Chromosome ena gene 2031066 2031968 . + . ID=gene:Rv1794;biotype=protein_coding;description=Conserved protein;gene_id=Rv1794;logic_name=ena +Chromosome ena gene 2031066 2031968 . + . ID=gene:Rv1794;biotype=protein_coding;description=Conserved protein;gene_id=Rv1794;logic_name=ena Chromosome ena mRNA 2031066 2031968 . + . ID=transcript:Rv1794;Parent=gene:Rv1794;biotype=protein_coding;transcript_id=Rv1794 Chromosome ena exon 2031066 2031968 . + . Parent=transcript:Rv1794;Name=Rv1794-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1794-1;rank=1 Chromosome ena CDS 2031066 2031968 . + 0 ID=CDS:Rv1794;Parent=transcript:Rv1794;protein_id=Rv1794 ### -Chromosome ena gene 2032240 2033751 . + . ID=gene:Rv1795;Name=eccD5;biotype=protein_coding;description=ESX conserved component EccD5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1795;logic_name=ena +Chromosome ena gene 2032240 2033751 . + . ID=gene:Rv1795;Name=eccD5;biotype=protein_coding;description=ESX conserved component EccD5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1795;logic_name=ena Chromosome ena mRNA 2032240 2033751 . + . ID=transcript:Rv1795;Parent=gene:Rv1795;Name=eccD5-1;biotype=protein_coding;transcript_id=Rv1795 Chromosome ena exon 2032240 2033751 . + . Parent=transcript:Rv1795;Name=Rv1795-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1795-1;rank=1 Chromosome ena CDS 2032240 2033751 . + 0 ID=CDS:Rv1795;Parent=transcript:Rv1795;protein_id=Rv1795 ### -Chromosome ena gene 2033729 2035486 . + . ID=gene:Rv1796;Name=mycP5;biotype=protein_coding;description=Probable proline rich membrane-anchored mycosin MycP5 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-5);gene_id=Rv1796;logic_name=ena +Chromosome ena gene 2033729 2035486 . + . ID=gene:Rv1796;Name=mycP5;biotype=protein_coding;description=Probable proline rich membrane-anchored mycosin MycP5 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-5);gene_id=Rv1796;logic_name=ena Chromosome ena mRNA 2033729 2035486 . + . ID=transcript:Rv1796;Parent=gene:Rv1796;Name=mycP5-1;biotype=protein_coding;transcript_id=Rv1796 Chromosome ena exon 2033729 2035486 . + . Parent=transcript:Rv1796;Name=Rv1796-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1796-1;rank=1 Chromosome ena CDS 2033729 2035486 . + 0 ID=CDS:Rv1796;Parent=transcript:Rv1796;protein_id=Rv1796 ### -Chromosome ena gene 2035483 2036703 . + . ID=gene:Rv1797;Name=eccE5;biotype=protein_coding;description=ESX conserved component EccE5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1797;logic_name=ena +Chromosome ena gene 2035483 2036703 . + . ID=gene:Rv1797;Name=eccE5;biotype=protein_coding;description=ESX conserved component EccE5. ESX-5 type VII secretion system protein. Probable membrane protein.;gene_id=Rv1797;logic_name=ena Chromosome ena mRNA 2035483 2036703 . + . ID=transcript:Rv1797;Parent=gene:Rv1797;Name=eccE5-1;biotype=protein_coding;transcript_id=Rv1797 Chromosome ena exon 2035483 2036703 . + . Parent=transcript:Rv1797;Name=Rv1797-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1797-1;rank=1 Chromosome ena CDS 2035483 2036703 . + 0 ID=CDS:Rv1797;Parent=transcript:Rv1797;protein_id=Rv1797 ### -Chromosome ena gene 2036700 2038532 . + . ID=gene:Rv1798;Name=eccA5;biotype=protein_coding;description=ESX conserved component EccA5. ESX-5 type VII secretion system protein.;gene_id=Rv1798;logic_name=ena +Chromosome ena gene 2036700 2038532 . + . ID=gene:Rv1798;Name=eccA5;biotype=protein_coding;description=ESX conserved component EccA5. ESX-5 type VII secretion system protein.;gene_id=Rv1798;logic_name=ena Chromosome ena mRNA 2036700 2038532 . + . ID=transcript:Rv1798;Parent=gene:Rv1798;Name=eccA5-1;biotype=protein_coding;transcript_id=Rv1798 Chromosome ena exon 2036700 2038532 . + . Parent=transcript:Rv1798;Name=Rv1798-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1798-1;rank=1 Chromosome ena CDS 2036700 2038532 . + 0 ID=CDS:Rv1798;Parent=transcript:Rv1798;protein_id=Rv1798 ### -Chromosome ena gene 2039159 2039350 . + . ID=gene:Rv1799;Name=lppT;biotype=protein_coding;description=Probable lipoprotein LppT;gene_id=Rv1799;logic_name=ena +Chromosome ena gene 2039159 2039350 . + . ID=gene:Rv1799;Name=lppT;biotype=protein_coding;description=Probable lipoprotein LppT;gene_id=Rv1799;logic_name=ena Chromosome ena mRNA 2039159 2039350 . + . ID=transcript:Rv1799;Parent=gene:Rv1799;Name=lppT-1;biotype=protein_coding;transcript_id=Rv1799 Chromosome ena exon 2039159 2039350 . + . Parent=transcript:Rv1799;Name=Rv1799-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1799-1;rank=1 Chromosome ena CDS 2039159 2039350 . + 0 ID=CDS:Rv1799;Parent=transcript:Rv1799;protein_id=Rv1799 ### -Chromosome ena gene 2039453 2041420 . + . ID=gene:Rv1800;Name=PPE28;biotype=protein_coding;description=PPE family protein PPE28;gene_id=Rv1800;logic_name=ena +Chromosome ena gene 2039453 2041420 . + . ID=gene:Rv1800;Name=PPE28;biotype=protein_coding;description=PPE family protein PPE28;gene_id=Rv1800;logic_name=ena Chromosome ena mRNA 2039453 2041420 . + . ID=transcript:Rv1800;Parent=gene:Rv1800;Name=PPE28-1;biotype=protein_coding;transcript_id=Rv1800 Chromosome ena exon 2039453 2041420 . + . Parent=transcript:Rv1800;Name=Rv1800-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1800-1;rank=1 Chromosome ena CDS 2039453 2041420 . + 0 ID=CDS:Rv1800;Parent=transcript:Rv1800;protein_id=Rv1800 ### -Chromosome ena gene 2042001 2043272 . + . ID=gene:Rv1801;Name=PPE29;biotype=protein_coding;description=PPE family protein PPE29;gene_id=Rv1801;logic_name=ena +Chromosome ena gene 2042001 2043272 . + . ID=gene:Rv1801;Name=PPE29;biotype=protein_coding;description=PPE family protein PPE29;gene_id=Rv1801;logic_name=ena Chromosome ena mRNA 2042001 2043272 . + . ID=transcript:Rv1801;Parent=gene:Rv1801;Name=PPE29-1;biotype=protein_coding;transcript_id=Rv1801 Chromosome ena exon 2042001 2043272 . + . Parent=transcript:Rv1801;Name=Rv1801-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1801-1;rank=1 Chromosome ena CDS 2042001 2043272 . + 0 ID=CDS:Rv1801;Parent=transcript:Rv1801;protein_id=Rv1801 ### -Chromosome ena gene 2043384 2044775 . + . ID=gene:Rv1802;Name=PPE30;biotype=protein_coding;description=PPE family protein PPE30;gene_id=Rv1802;logic_name=ena +Chromosome ena gene 2043384 2044775 . + . ID=gene:Rv1802;Name=PPE30;biotype=protein_coding;description=PPE family protein PPE30;gene_id=Rv1802;logic_name=ena Chromosome ena mRNA 2043384 2044775 . + . ID=transcript:Rv1802;Parent=gene:Rv1802;Name=PPE30-1;biotype=protein_coding;transcript_id=Rv1802 Chromosome ena exon 2043384 2044775 . + . Parent=transcript:Rv1802;Name=Rv1802-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1802-1;rank=1 Chromosome ena CDS 2043384 2044775 . + 0 ID=CDS:Rv1802;Parent=transcript:Rv1802;protein_id=Rv1802 ### -Chromosome ena gene 2044923 2046842 . - . ID=gene:Rv1803c;Name=PE_PGRS32;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS32;gene_id=Rv1803c;logic_name=ena +Chromosome ena gene 2044923 2046842 . - . ID=gene:Rv1803c;Name=PE_PGRS32;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS32;gene_id=Rv1803c;logic_name=ena Chromosome ena mRNA 2044923 2046842 . - . ID=transcript:Rv1803c;Parent=gene:Rv1803c;Name=PE_PGRS32-1;biotype=protein_coding;transcript_id=Rv1803c Chromosome ena exon 2044923 2046842 . - . Parent=transcript:Rv1803c;Name=Rv1803c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1803c-1;rank=1 Chromosome ena CDS 2044923 2046842 . - 0 ID=CDS:Rv1803c;Parent=transcript:Rv1803c;protein_id=Rv1803c ### -Chromosome ena gene 2047023 2047349 . - . ID=gene:Rv1804c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1804c;logic_name=ena +Chromosome ena gene 2047023 2047349 . - . ID=gene:Rv1804c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1804c;logic_name=ena Chromosome ena mRNA 2047023 2047349 . - . ID=transcript:Rv1804c;Parent=gene:Rv1804c;biotype=protein_coding;transcript_id=Rv1804c Chromosome ena exon 2047023 2047349 . - . Parent=transcript:Rv1804c;Name=Rv1804c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1804c-1;rank=1 Chromosome ena CDS 2047023 2047349 . - 0 ID=CDS:Rv1804c;Parent=transcript:Rv1804c;protein_id=Rv1804c ### -Chromosome ena gene 2047687 2048034 . - . ID=gene:Rv1805c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1805c;logic_name=ena +Chromosome ena gene 2047687 2048034 . - . ID=gene:Rv1805c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1805c;logic_name=ena Chromosome ena mRNA 2047687 2048034 . - . ID=transcript:Rv1805c;Parent=gene:Rv1805c;biotype=protein_coding;transcript_id=Rv1805c Chromosome ena exon 2047687 2048034 . - . Parent=transcript:Rv1805c;Name=Rv1805c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1805c-1;rank=1 Chromosome ena CDS 2047687 2048034 . - 0 ID=CDS:Rv1805c;Parent=transcript:Rv1805c;protein_id=Rv1805c ### -Chromosome ena gene 2048072 2048371 . + . ID=gene:Rv1806;Name=PE20;biotype=protein_coding;description=PE family protein PE20;gene_id=Rv1806;logic_name=ena +Chromosome ena gene 2048072 2048371 . + . ID=gene:Rv1806;Name=PE20;biotype=protein_coding;description=PE family protein PE20;gene_id=Rv1806;logic_name=ena Chromosome ena mRNA 2048072 2048371 . + . ID=transcript:Rv1806;Parent=gene:Rv1806;Name=PE20-1;biotype=protein_coding;transcript_id=Rv1806 Chromosome ena exon 2048072 2048371 . + . Parent=transcript:Rv1806;Name=Rv1806-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1806-1;rank=1 Chromosome ena CDS 2048072 2048371 . + 0 ID=CDS:Rv1806;Parent=transcript:Rv1806;protein_id=Rv1806 ### -Chromosome ena gene 2048398 2049597 . + . ID=gene:Rv1807;Name=PPE31;biotype=protein_coding;description=PPE family protein PPE31;gene_id=Rv1807;logic_name=ena +Chromosome ena gene 2048398 2049597 . + . ID=gene:Rv1807;Name=PPE31;biotype=protein_coding;description=PPE family protein PPE31;gene_id=Rv1807;logic_name=ena Chromosome ena mRNA 2048398 2049597 . + . ID=transcript:Rv1807;Parent=gene:Rv1807;Name=PPE31-1;biotype=protein_coding;transcript_id=Rv1807 Chromosome ena exon 2048398 2049597 . + . Parent=transcript:Rv1807;Name=Rv1807-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1807-1;rank=1 Chromosome ena CDS 2048398 2049597 . + 0 ID=CDS:Rv1807;Parent=transcript:Rv1807;protein_id=Rv1807 ### -Chromosome ena gene 2049921 2051150 . + . ID=gene:Rv1808;Name=PPE32;biotype=protein_coding;description=PPE family protein PPE32;gene_id=Rv1808;logic_name=ena +Chromosome ena gene 2049921 2051150 . + . ID=gene:Rv1808;Name=PPE32;biotype=protein_coding;description=PPE family protein PPE32;gene_id=Rv1808;logic_name=ena Chromosome ena mRNA 2049921 2051150 . + . ID=transcript:Rv1808;Parent=gene:Rv1808;Name=PPE32-1;biotype=protein_coding;transcript_id=Rv1808 Chromosome ena exon 2049921 2051150 . + . Parent=transcript:Rv1808;Name=Rv1808-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1808-1;rank=1 Chromosome ena CDS 2049921 2051150 . + 0 ID=CDS:Rv1808;Parent=transcript:Rv1808;protein_id=Rv1808 ### -Chromosome ena gene 2051282 2052688 . + . ID=gene:Rv1809;Name=PPE33;biotype=protein_coding;description=PPE family protein PPE33;gene_id=Rv1809;logic_name=ena +Chromosome ena gene 2051282 2052688 . + . ID=gene:Rv1809;Name=PPE33;biotype=protein_coding;description=PPE family protein PPE33;gene_id=Rv1809;logic_name=ena Chromosome ena mRNA 2051282 2052688 . + . ID=transcript:Rv1809;Parent=gene:Rv1809;Name=PPE33-1;biotype=protein_coding;transcript_id=Rv1809 Chromosome ena exon 2051282 2052688 . + . Parent=transcript:Rv1809;Name=Rv1809-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1809-1;rank=1 Chromosome ena CDS 2051282 2052688 . + 0 ID=CDS:Rv1809;Parent=transcript:Rv1809;protein_id=Rv1809 ### -Chromosome ena gene 2052933 2053289 . + . ID=gene:Rv1810;biotype=protein_coding;description=Conserved protein;gene_id=Rv1810;logic_name=ena +Chromosome ena gene 2052933 2053289 . + . ID=gene:Rv1810;biotype=protein_coding;description=Conserved protein;gene_id=Rv1810;logic_name=ena Chromosome ena mRNA 2052933 2053289 . + . ID=transcript:Rv1810;Parent=gene:Rv1810;biotype=protein_coding;transcript_id=Rv1810 Chromosome ena exon 2052933 2053289 . + . Parent=transcript:Rv1810;Name=Rv1810-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1810-1;rank=1 Chromosome ena CDS 2052933 2053289 . + 0 ID=CDS:Rv1810;Parent=transcript:Rv1810;protein_id=Rv1810 ### -Chromosome ena gene 2053443 2054147 . + . ID=gene:Rv1811;Name=mgtC;biotype=protein_coding;description=Possible Mg2+ transport P-type ATPase C MgtC;gene_id=Rv1811;logic_name=ena +Chromosome ena gene 2053443 2054147 . + . ID=gene:Rv1811;Name=mgtC;biotype=protein_coding;description=Possible Mg2+ transport P-type ATPase C MgtC;gene_id=Rv1811;logic_name=ena Chromosome ena mRNA 2053443 2054147 . + . ID=transcript:Rv1811;Parent=gene:Rv1811;Name=mgtC-1;biotype=protein_coding;transcript_id=Rv1811 Chromosome ena exon 2053443 2054147 . + . Parent=transcript:Rv1811;Name=Rv1811-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1811-1;rank=1 Chromosome ena CDS 2053443 2054147 . + 0 ID=CDS:Rv1811;Parent=transcript:Rv1811;protein_id=Rv1811 ### -Chromosome ena gene 2054157 2055359 . - . ID=gene:Rv1812c;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv1812c;logic_name=ena +Chromosome ena gene 2054157 2055359 . - . ID=gene:Rv1812c;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv1812c;logic_name=ena Chromosome ena mRNA 2054157 2055359 . - . ID=transcript:Rv1812c;Parent=gene:Rv1812c;biotype=protein_coding;transcript_id=Rv1812c Chromosome ena exon 2054157 2055359 . - . Parent=transcript:Rv1812c;Name=Rv1812c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1812c-1;rank=1 Chromosome ena CDS 2054157 2055359 . - 0 ID=CDS:Rv1812c;Parent=transcript:Rv1812c;protein_id=Rv1812c ### -Chromosome ena gene 2055681 2056112 . - . ID=gene:Rv1813c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1813c;logic_name=ena +Chromosome ena gene 2055681 2056112 . - . ID=gene:Rv1813c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1813c;logic_name=ena Chromosome ena mRNA 2055681 2056112 . - . ID=transcript:Rv1813c;Parent=gene:Rv1813c;biotype=protein_coding;transcript_id=Rv1813c Chromosome ena exon 2055681 2056112 . - . Parent=transcript:Rv1813c;Name=Rv1813c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1813c-1;rank=1 Chromosome ena CDS 2055681 2056112 . - 0 ID=CDS:Rv1813c;Parent=transcript:Rv1813c;protein_id=Rv1813c ### -Chromosome ena gene 2056521 2057423 . + . ID=gene:Rv1814;Name=erg3;biotype=protein_coding;description=Membrane-bound C-5 sterol desaturase Erg3 (sterol-C5-desaturase);gene_id=Rv1814;logic_name=ena +Chromosome ena gene 2056521 2057423 . + . ID=gene:Rv1814;Name=erg3;biotype=protein_coding;description=Membrane-bound C-5 sterol desaturase Erg3 (sterol-C5-desaturase);gene_id=Rv1814;logic_name=ena Chromosome ena mRNA 2056521 2057423 . + . ID=transcript:Rv1814;Parent=gene:Rv1814;Name=erg3-1;biotype=protein_coding;transcript_id=Rv1814 Chromosome ena exon 2056521 2057423 . + . Parent=transcript:Rv1814;Name=Rv1814-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1814-1;rank=1 Chromosome ena CDS 2056521 2057423 . + 0 ID=CDS:Rv1814;Parent=transcript:Rv1814;protein_id=Rv1814 ### -Chromosome ena gene 2057528 2058193 . + . ID=gene:Rv1815;biotype=protein_coding;description=Conserved protein;gene_id=Rv1815;logic_name=ena +Chromosome ena gene 2057528 2058193 . + . ID=gene:Rv1815;biotype=protein_coding;description=Conserved protein;gene_id=Rv1815;logic_name=ena Chromosome ena mRNA 2057528 2058193 . + . ID=transcript:Rv1815;Parent=gene:Rv1815;biotype=protein_coding;transcript_id=Rv1815 Chromosome ena exon 2057528 2058193 . + . Parent=transcript:Rv1815;Name=Rv1815-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1815-1;rank=1 Chromosome ena CDS 2057528 2058193 . + 0 ID=CDS:Rv1815;Parent=transcript:Rv1815;protein_id=Rv1815 ### -Chromosome ena gene 2058256 2058960 . + . ID=gene:Rv1816;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1816;logic_name=ena +Chromosome ena gene 2058256 2058960 . + . ID=gene:Rv1816;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv1816;logic_name=ena Chromosome ena mRNA 2058256 2058960 . + . ID=transcript:Rv1816;Parent=gene:Rv1816;biotype=protein_coding;transcript_id=Rv1816 Chromosome ena exon 2058256 2058960 . + . Parent=transcript:Rv1816;Name=Rv1816-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1816-1;rank=1 Chromosome ena CDS 2058256 2058960 . + 0 ID=CDS:Rv1816;Parent=transcript:Rv1816;protein_id=Rv1816 ### -Chromosome ena gene 2059595 2061058 . + . ID=gene:Rv1817;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv1817;logic_name=ena +Chromosome ena gene 2059595 2061058 . + . ID=gene:Rv1817;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv1817;logic_name=ena Chromosome ena mRNA 2059595 2061058 . + . ID=transcript:Rv1817;Parent=gene:Rv1817;biotype=protein_coding;transcript_id=Rv1817 Chromosome ena exon 2059595 2061058 . + . Parent=transcript:Rv1817;Name=Rv1817-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1817-1;rank=1 Chromosome ena CDS 2059595 2061058 . + 0 ID=CDS:Rv1817;Parent=transcript:Rv1817;protein_id=Rv1817 ### -Chromosome ena gene 2061178 2062674 . - . ID=gene:Rv1818c;Name=PE_PGRS33;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS33;gene_id=Rv1818c;logic_name=ena +Chromosome ena gene 2061178 2062674 . - . ID=gene:Rv1818c;Name=PE_PGRS33;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS33;gene_id=Rv1818c;logic_name=ena Chromosome ena mRNA 2061178 2062674 . - . ID=transcript:Rv1818c;Parent=gene:Rv1818c;Name=PE_PGRS33-1;biotype=protein_coding;transcript_id=Rv1818c Chromosome ena exon 2061178 2062674 . - . Parent=transcript:Rv1818c;Name=Rv1818c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1818c-1;rank=1 Chromosome ena CDS 2061178 2062674 . - 0 ID=CDS:Rv1818c;Parent=transcript:Rv1818c;protein_id=Rv1818c ### -Chromosome ena gene 2062809 2064728 . - . ID=gene:Rv1819c;Name=bacA;biotype=protein_coding;description=Probable drug-transport transmembrane ATP-binding protein ABC transporter BacA;gene_id=Rv1819c;logic_name=ena +Chromosome ena gene 2062809 2064728 . - . ID=gene:Rv1819c;Name=bacA;biotype=protein_coding;description=Probable drug-transport transmembrane ATP-binding protein ABC transporter BacA;gene_id=Rv1819c;logic_name=ena Chromosome ena mRNA 2062809 2064728 . - . ID=transcript:Rv1819c;Parent=gene:Rv1819c;Name=bacA-1;biotype=protein_coding;transcript_id=Rv1819c Chromosome ena exon 2062809 2064728 . - . Parent=transcript:Rv1819c;Name=Rv1819c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1819c-1;rank=1 Chromosome ena CDS 2062809 2064728 . - 0 ID=CDS:Rv1819c;Parent=transcript:Rv1819c;protein_id=Rv1819c ### -Chromosome ena gene 2064799 2066442 . + . ID=gene:Rv1820;Name=ilvG;biotype=protein_coding;description=Probable acetolactate synthase IlvG (acetohydroxy-acid synthase)(ALS);gene_id=Rv1820;logic_name=ena +Chromosome ena gene 2064799 2066442 . + . ID=gene:Rv1820;Name=ilvG;biotype=protein_coding;description=Probable acetolactate synthase IlvG (acetohydroxy-acid synthase)(ALS);gene_id=Rv1820;logic_name=ena Chromosome ena mRNA 2064799 2066442 . + . ID=transcript:Rv1820;Parent=gene:Rv1820;Name=ilvG-1;biotype=protein_coding;transcript_id=Rv1820 Chromosome ena exon 2064799 2066442 . + . Parent=transcript:Rv1820;Name=Rv1820-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1820-1;rank=1 Chromosome ena CDS 2064799 2066442 . + 0 ID=CDS:Rv1820;Parent=transcript:Rv1820;protein_id=Rv1820 ### -Chromosome ena gene 2066457 2068883 . + . ID=gene:Rv1821;Name=secA2;biotype=protein_coding;description=Possible preprotein translocase ATPase SecA2;gene_id=Rv1821;logic_name=ena +Chromosome ena gene 2066457 2068883 . + . ID=gene:Rv1821;Name=secA2;biotype=protein_coding;description=Possible preprotein translocase ATPase SecA2;gene_id=Rv1821;logic_name=ena Chromosome ena mRNA 2066457 2068883 . + . ID=transcript:Rv1821;Parent=gene:Rv1821;Name=secA2-1;biotype=protein_coding;transcript_id=Rv1821 Chromosome ena exon 2066457 2068883 . + . Parent=transcript:Rv1821;Name=Rv1821-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1821-1;rank=1 Chromosome ena CDS 2066457 2068883 . + 0 ID=CDS:Rv1821;Parent=transcript:Rv1821;protein_id=Rv1821 ### -Chromosome ena gene 2069080 2069709 . + . ID=gene:Rv1822;Name=pgsA2;biotype=protein_coding;description=Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA2 (PGP synthase) (phosphatidylglycerophosphate synthase) (3-phosphatidyl-1'-glycerol-3'phosphate synthase);gene_id=Rv1822;logic_name=ena +Chromosome ena gene 2069080 2069709 . + . ID=gene:Rv1822;Name=pgsA2;biotype=protein_coding;description=Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA2 (PGP synthase) (phosphatidylglycerophosphate synthase) (3-phosphatidyl-1'-glycerol-3'phosphate synthase);gene_id=Rv1822;logic_name=ena Chromosome ena mRNA 2069080 2069709 . + . ID=transcript:Rv1822;Parent=gene:Rv1822;Name=pgsA2-1;biotype=protein_coding;transcript_id=Rv1822 Chromosome ena exon 2069080 2069709 . + . Parent=transcript:Rv1822;Name=Rv1822-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1822-1;rank=1 Chromosome ena CDS 2069080 2069709 . + 0 ID=CDS:Rv1822;Parent=transcript:Rv1822;protein_id=Rv1822 ### -Chromosome ena gene 2069702 2070625 . + . ID=gene:Rv1823;biotype=protein_coding;description=Conserved protein;gene_id=Rv1823;logic_name=ena +Chromosome ena gene 2069702 2070625 . + . ID=gene:Rv1823;biotype=protein_coding;description=Conserved protein;gene_id=Rv1823;logic_name=ena Chromosome ena mRNA 2069702 2070625 . + . ID=transcript:Rv1823;Parent=gene:Rv1823;biotype=protein_coding;transcript_id=Rv1823 Chromosome ena exon 2069702 2070625 . + . Parent=transcript:Rv1823;Name=Rv1823-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1823-1;rank=1 Chromosome ena CDS 2069702 2070625 . + 0 ID=CDS:Rv1823;Parent=transcript:Rv1823;protein_id=Rv1823 ### -Chromosome ena gene 2070654 2071019 . + . ID=gene:Rv1824;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1824;logic_name=ena +Chromosome ena gene 2070654 2071019 . + . ID=gene:Rv1824;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1824;logic_name=ena Chromosome ena mRNA 2070654 2071019 . + . ID=transcript:Rv1824;Parent=gene:Rv1824;biotype=protein_coding;transcript_id=Rv1824 Chromosome ena exon 2070654 2071019 . + . Parent=transcript:Rv1824;Name=Rv1824-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1824-1;rank=1 Chromosome ena CDS 2070654 2071019 . + 0 ID=CDS:Rv1824;Parent=transcript:Rv1824;protein_id=Rv1824 ### -Chromosome ena gene 2071036 2071914 . + . ID=gene:Rv1825;biotype=protein_coding;description=Conserved protein;gene_id=Rv1825;logic_name=ena +Chromosome ena gene 2071036 2071914 . + . ID=gene:Rv1825;biotype=protein_coding;description=Conserved protein;gene_id=Rv1825;logic_name=ena Chromosome ena mRNA 2071036 2071914 . + . ID=transcript:Rv1825;Parent=gene:Rv1825;biotype=protein_coding;transcript_id=Rv1825 Chromosome ena exon 2071036 2071914 . + . Parent=transcript:Rv1825;Name=Rv1825-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1825-1;rank=1 Chromosome ena CDS 2071036 2071914 . + 0 ID=CDS:Rv1825;Parent=transcript:Rv1825;protein_id=Rv1825 ### -Chromosome ena gene 2071952 2072356 . + . ID=gene:Rv1826;Name=gcvH;biotype=protein_coding;description=Probable glycine cleavage system H protein GcvH;gene_id=Rv1826;logic_name=ena +Chromosome ena gene 2071952 2072356 . + . ID=gene:Rv1826;Name=gcvH;biotype=protein_coding;description=Probable glycine cleavage system H protein GcvH;gene_id=Rv1826;logic_name=ena Chromosome ena mRNA 2071952 2072356 . + . ID=transcript:Rv1826;Parent=gene:Rv1826;Name=gcvH-1;biotype=protein_coding;transcript_id=Rv1826 Chromosome ena exon 2071952 2072356 . + . Parent=transcript:Rv1826;Name=Rv1826-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1826-1;rank=1 Chromosome ena CDS 2071952 2072356 . + 0 ID=CDS:Rv1826;Parent=transcript:Rv1826;protein_id=Rv1826 ### -Chromosome ena gene 2072596 2073084 . + . ID=gene:Rv1827;Name=garA;biotype=protein_coding;description=Conserved protein with FHA domain%2C GarA;gene_id=Rv1827;logic_name=ena +Chromosome ena gene 2072596 2073084 . + . ID=gene:Rv1827;Name=garA;biotype=protein_coding;description=Conserved protein with FHA domain%2C GarA;gene_id=Rv1827;logic_name=ena Chromosome ena mRNA 2072596 2073084 . + . ID=transcript:Rv1827;Parent=gene:Rv1827;Name=garA-1;biotype=protein_coding;transcript_id=Rv1827 Chromosome ena exon 2072596 2073084 . + . Parent=transcript:Rv1827;Name=Rv1827-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1827-1;rank=1 Chromosome ena CDS 2072596 2073084 . + 0 ID=CDS:Rv1827;Parent=transcript:Rv1827;protein_id=Rv1827 ### -Chromosome ena gene 2073081 2073824 . + . ID=gene:Rv1828;biotype=protein_coding;description=Conserved protein;gene_id=Rv1828;logic_name=ena +Chromosome ena gene 2073081 2073824 . + . ID=gene:Rv1828;biotype=protein_coding;description=Conserved protein;gene_id=Rv1828;logic_name=ena Chromosome ena mRNA 2073081 2073824 . + . ID=transcript:Rv1828;Parent=gene:Rv1828;biotype=protein_coding;transcript_id=Rv1828 Chromosome ena exon 2073081 2073824 . + . Parent=transcript:Rv1828;Name=Rv1828-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1828-1;rank=1 Chromosome ena CDS 2073081 2073824 . + 0 ID=CDS:Rv1828;Parent=transcript:Rv1828;protein_id=Rv1828 ### -Chromosome ena gene 2073943 2074437 . + . ID=gene:Rv1829;biotype=protein_coding;description=Conserved protein;gene_id=Rv1829;logic_name=ena +Chromosome ena gene 2073943 2074437 . + . ID=gene:Rv1829;biotype=protein_coding;description=Conserved protein;gene_id=Rv1829;logic_name=ena Chromosome ena mRNA 2073943 2074437 . + . ID=transcript:Rv1829;Parent=gene:Rv1829;biotype=protein_coding;transcript_id=Rv1829 Chromosome ena exon 2073943 2074437 . + . Parent=transcript:Rv1829;Name=Rv1829-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1829-1;rank=1 Chromosome ena CDS 2073943 2074437 . + 0 ID=CDS:Rv1829;Parent=transcript:Rv1829;protein_id=Rv1829 ### -Chromosome ena gene 2074841 2075518 . + . ID=gene:Rv1830;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1830;logic_name=ena +Chromosome ena gene 2074841 2075518 . + . ID=gene:Rv1830;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1830;logic_name=ena Chromosome ena mRNA 2074841 2075518 . + . ID=transcript:Rv1830;Parent=gene:Rv1830;biotype=protein_coding;transcript_id=Rv1830 Chromosome ena exon 2074841 2075518 . + . Parent=transcript:Rv1830;Name=Rv1830-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1830-1;rank=1 Chromosome ena CDS 2074841 2075518 . + 0 ID=CDS:Rv1830;Parent=transcript:Rv1830;protein_id=Rv1830 ### -Chromosome ena gene 2075571 2075828 . + . ID=gene:Rv1831;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1831;logic_name=ena +Chromosome ena gene 2075571 2075828 . + . ID=gene:Rv1831;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1831;logic_name=ena Chromosome ena mRNA 2075571 2075828 . + . ID=transcript:Rv1831;Parent=gene:Rv1831;biotype=protein_coding;transcript_id=Rv1831 Chromosome ena exon 2075571 2075828 . + . Parent=transcript:Rv1831;Name=Rv1831-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1831-1;rank=1 Chromosome ena CDS 2075571 2075828 . + 0 ID=CDS:Rv1831;Parent=transcript:Rv1831;protein_id=Rv1831 ### -Chromosome ena gene 2075877 2078702 . + . ID=gene:Rv1832;Name=gcvB;biotype=protein_coding;description=Probable glycine dehydrogenase GcvB (glycine decarboxylase) (glycine cleavage system P-protein);gene_id=Rv1832;logic_name=ena +Chromosome ena gene 2075877 2078702 . + . ID=gene:Rv1832;Name=gcvB;biotype=protein_coding;description=Probable glycine dehydrogenase GcvB (glycine decarboxylase) (glycine cleavage system P-protein);gene_id=Rv1832;logic_name=ena Chromosome ena mRNA 2075877 2078702 . + . ID=transcript:Rv1832;Parent=gene:Rv1832;Name=gcvB-1;biotype=protein_coding;transcript_id=Rv1832 Chromosome ena exon 2075877 2078702 . + . Parent=transcript:Rv1832;Name=Rv1832-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1832-1;rank=1 Chromosome ena CDS 2075877 2078702 . + 0 ID=CDS:Rv1832;Parent=transcript:Rv1832;protein_id=Rv1832 ### -Chromosome ena gene 2078929 2079789 . - . ID=gene:Rv1833c;biotype=protein_coding;description=Possible haloalkane dehalogenase;gene_id=Rv1833c;logic_name=ena +Chromosome ena gene 2078929 2079789 . - . ID=gene:Rv1833c;biotype=protein_coding;description=Possible haloalkane dehalogenase;gene_id=Rv1833c;logic_name=ena Chromosome ena mRNA 2078929 2079789 . - . ID=transcript:Rv1833c;Parent=gene:Rv1833c;biotype=protein_coding;transcript_id=Rv1833c Chromosome ena exon 2078929 2079789 . - . Parent=transcript:Rv1833c;Name=Rv1833c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1833c-1;rank=1 Chromosome ena CDS 2078929 2079789 . - 0 ID=CDS:Rv1833c;Parent=transcript:Rv1833c;protein_id=Rv1833c ### -Chromosome ena gene 2079830 2080696 . + . ID=gene:Rv1834;Name=lipZ;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1834;logic_name=ena +Chromosome ena gene 2079830 2080696 . + . ID=gene:Rv1834;Name=lipZ;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv1834;logic_name=ena Chromosome ena mRNA 2079830 2080696 . + . ID=transcript:Rv1834;Parent=gene:Rv1834;Name=lipZ-1;biotype=protein_coding;transcript_id=Rv1834 Chromosome ena exon 2079830 2080696 . + . Parent=transcript:Rv1834;Name=Rv1834-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1834-1;rank=1 Chromosome ena CDS 2079830 2080696 . + 0 ID=CDS:Rv1834;Parent=transcript:Rv1834;protein_id=Rv1834 ### -Chromosome ena gene 2080701 2082587 . - . ID=gene:Rv1835c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1835c;logic_name=ena +Chromosome ena gene 2080701 2082587 . - . ID=gene:Rv1835c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1835c;logic_name=ena Chromosome ena mRNA 2080701 2082587 . - . ID=transcript:Rv1835c;Parent=gene:Rv1835c;biotype=protein_coding;transcript_id=Rv1835c Chromosome ena exon 2080701 2082587 . - . Parent=transcript:Rv1835c;Name=Rv1835c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1835c-1;rank=1 Chromosome ena CDS 2080701 2082587 . - 0 ID=CDS:Rv1835c;Parent=transcript:Rv1835c;protein_id=Rv1835c ### -Chromosome ena gene 2082603 2084636 . - . ID=gene:Rv1836c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1836c;logic_name=ena +Chromosome ena gene 2082603 2084636 . - . ID=gene:Rv1836c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1836c;logic_name=ena Chromosome ena mRNA 2082603 2084636 . - . ID=transcript:Rv1836c;Parent=gene:Rv1836c;biotype=protein_coding;transcript_id=Rv1836c Chromosome ena exon 2082603 2084636 . - . Parent=transcript:Rv1836c;Name=Rv1836c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1836c-1;rank=1 Chromosome ena CDS 2082603 2084636 . - 0 ID=CDS:Rv1836c;Parent=transcript:Rv1836c;protein_id=Rv1836c ### -Chromosome ena gene 2084756 2086981 . - . ID=gene:Rv1837c;Name=glcB;biotype=protein_coding;description=Malate synthase G GlcB;gene_id=Rv1837c;logic_name=ena +Chromosome ena gene 2084756 2086981 . - . ID=gene:Rv1837c;Name=glcB;biotype=protein_coding;description=Malate synthase G GlcB;gene_id=Rv1837c;logic_name=ena Chromosome ena mRNA 2084756 2086981 . - . ID=transcript:Rv1837c;Parent=gene:Rv1837c;Name=glcB-1;biotype=protein_coding;transcript_id=Rv1837c Chromosome ena exon 2084756 2086981 . - . Parent=transcript:Rv1837c;Name=Rv1837c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1837c-1;rank=1 Chromosome ena CDS 2084756 2086981 . - 0 ID=CDS:Rv1837c;Parent=transcript:Rv1837c;protein_id=Rv1837c ### -Chromosome ena gene 2087257 2087652 . - . ID=gene:Rv1838c;Name=vapC13;biotype=protein_coding;description=Possible toxin VapC13;gene_id=Rv1838c;logic_name=ena +Chromosome ena gene 2087257 2087652 . - . ID=gene:Rv1838c;Name=vapC13;biotype=protein_coding;description=Possible toxin VapC13;gene_id=Rv1838c;logic_name=ena Chromosome ena mRNA 2087257 2087652 . - . ID=transcript:Rv1838c;Parent=gene:Rv1838c;Name=vapC13-1;biotype=protein_coding;transcript_id=Rv1838c Chromosome ena exon 2087257 2087652 . - . Parent=transcript:Rv1838c;Name=Rv1838c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1838c-1;rank=1 Chromosome ena CDS 2087257 2087652 . - 0 ID=CDS:Rv1838c;Parent=transcript:Rv1838c;protein_id=Rv1838c ### -Chromosome ena gene 2087649 2087912 . - . ID=gene:Rv1839c;Name=vapB13;biotype=protein_coding;description=Possible antitoxin VapB13;gene_id=Rv1839c;logic_name=ena +Chromosome ena gene 2087649 2087912 . - . ID=gene:Rv1839c;Name=vapB13;biotype=protein_coding;description=Possible antitoxin VapB13;gene_id=Rv1839c;logic_name=ena Chromosome ena mRNA 2087649 2087912 . - . ID=transcript:Rv1839c;Parent=gene:Rv1839c;Name=vapB13-1;biotype=protein_coding;transcript_id=Rv1839c Chromosome ena exon 2087649 2087912 . - . Parent=transcript:Rv1839c;Name=Rv1839c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1839c-1;rank=1 Chromosome ena CDS 2087649 2087912 . - 0 ID=CDS:Rv1839c;Parent=transcript:Rv1839c;protein_id=Rv1839c ### -Chromosome ena gene 2087971 2089518 . - . ID=gene:Rv1840c;Name=PE_PGRS34;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS34;gene_id=Rv1840c;logic_name=ena +Chromosome ena gene 2087971 2089518 . - . ID=gene:Rv1840c;Name=PE_PGRS34;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS34;gene_id=Rv1840c;logic_name=ena Chromosome ena mRNA 2087971 2089518 . - . ID=transcript:Rv1840c;Parent=gene:Rv1840c;Name=PE_PGRS34-1;biotype=protein_coding;transcript_id=Rv1840c Chromosome ena exon 2087971 2089518 . - . Parent=transcript:Rv1840c;Name=Rv1840c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1840c-1;rank=1 Chromosome ena CDS 2087971 2089518 . - 0 ID=CDS:Rv1840c;Parent=transcript:Rv1840c;protein_id=Rv1840c ### -Chromosome ena gene 2089681 2090718 . - . ID=gene:Rv1841c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1841c;logic_name=ena +Chromosome ena gene 2089681 2090718 . - . ID=gene:Rv1841c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1841c;logic_name=ena Chromosome ena mRNA 2089681 2090718 . - . ID=transcript:Rv1841c;Parent=gene:Rv1841c;biotype=protein_coding;transcript_id=Rv1841c Chromosome ena exon 2089681 2090718 . - . Parent=transcript:Rv1841c;Name=Rv1841c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1841c-1;rank=1 Chromosome ena CDS 2089681 2090718 . - 0 ID=CDS:Rv1841c;Parent=transcript:Rv1841c;protein_id=Rv1841c ### -Chromosome ena gene 2090718 2092085 . - . ID=gene:Rv1842c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1842c;logic_name=ena +Chromosome ena gene 2090718 2092085 . - . ID=gene:Rv1842c;biotype=protein_coding;description=Conserved hypothetical membrane protein;gene_id=Rv1842c;logic_name=ena Chromosome ena mRNA 2090718 2092085 . - . ID=transcript:Rv1842c;Parent=gene:Rv1842c;biotype=protein_coding;transcript_id=Rv1842c Chromosome ena exon 2090718 2092085 . - . Parent=transcript:Rv1842c;Name=Rv1842c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1842c-1;rank=1 Chromosome ena CDS 2090718 2092085 . - 0 ID=CDS:Rv1842c;Parent=transcript:Rv1842c;protein_id=Rv1842c ### -Chromosome ena gene 2092259 2093698 . - . ID=gene:Rv1843c;Name=guaB1;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB1(imp dehydrogenase) (IMPDH) (IMPD);gene_id=Rv1843c;logic_name=ena +Chromosome ena gene 2092259 2093698 . - . ID=gene:Rv1843c;Name=guaB1;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB1(imp dehydrogenase) (IMPDH) (IMPD);gene_id=Rv1843c;logic_name=ena Chromosome ena mRNA 2092259 2093698 . - . ID=transcript:Rv1843c;Parent=gene:Rv1843c;Name=guaB1-1;biotype=protein_coding;transcript_id=Rv1843c Chromosome ena exon 2092259 2093698 . - . Parent=transcript:Rv1843c;Name=Rv1843c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1843c-1;rank=1 Chromosome ena CDS 2092259 2093698 . - 0 ID=CDS:Rv1843c;Parent=transcript:Rv1843c;protein_id=Rv1843c ### -Chromosome ena gene 2093731 2095188 . - . ID=gene:Rv1844c;Name=gnd1;biotype=protein_coding;description=Probable 6-phosphogluconate dehydrogenase Gnd1;gene_id=Rv1844c;logic_name=ena +Chromosome ena gene 2093731 2095188 . - . ID=gene:Rv1844c;Name=gnd1;biotype=protein_coding;description=Probable 6-phosphogluconate dehydrogenase Gnd1;gene_id=Rv1844c;logic_name=ena Chromosome ena mRNA 2093731 2095188 . - . ID=transcript:Rv1844c;Parent=gene:Rv1844c;Name=gnd1-1;biotype=protein_coding;transcript_id=Rv1844c Chromosome ena exon 2093731 2095188 . - . Parent=transcript:Rv1844c;Name=Rv1844c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1844c-1;rank=1 Chromosome ena CDS 2093731 2095188 . - 0 ID=CDS:Rv1844c;Parent=transcript:Rv1844c;protein_id=Rv1844c ### -Chromosome ena gene 2095218 2096168 . - . ID=gene:Rv1845c;Name=blaR;biotype=protein_coding;description=Possible sensor-transducer protein BlaR;gene_id=Rv1845c;logic_name=ena +Chromosome ena gene 2095218 2096168 . - . ID=gene:Rv1845c;Name=blaR;biotype=protein_coding;description=Possible sensor-transducer protein BlaR;gene_id=Rv1845c;logic_name=ena Chromosome ena mRNA 2095218 2096168 . - . ID=transcript:Rv1845c;Parent=gene:Rv1845c;Name=blaR-1;biotype=protein_coding;transcript_id=Rv1845c Chromosome ena exon 2095218 2096168 . - . Parent=transcript:Rv1845c;Name=Rv1845c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1845c-1;rank=1 Chromosome ena CDS 2095218 2096168 . - 0 ID=CDS:Rv1845c;Parent=transcript:Rv1845c;protein_id=Rv1845c ### -Chromosome ena gene 2096183 2096599 . - . ID=gene:Rv1846c;Name=blaI;biotype=protein_coding;description=Transcriptional repressor BlaI;gene_id=Rv1846c;logic_name=ena +Chromosome ena gene 2096183 2096599 . - . ID=gene:Rv1846c;Name=blaI;biotype=protein_coding;description=Transcriptional repressor BlaI;gene_id=Rv1846c;logic_name=ena Chromosome ena mRNA 2096183 2096599 . - . ID=transcript:Rv1846c;Parent=gene:Rv1846c;Name=blaI-1;biotype=protein_coding;transcript_id=Rv1846c Chromosome ena exon 2096183 2096599 . - . Parent=transcript:Rv1846c;Name=Rv1846c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1846c-1;rank=1 Chromosome ena CDS 2096183 2096599 . - 0 ID=CDS:Rv1846c;Parent=transcript:Rv1846c;protein_id=Rv1846c ### -Chromosome ena gene 2096877 2097299 . + . ID=gene:Rv1847;biotype=protein_coding;description=Conserved protein;gene_id=Rv1847;logic_name=ena +Chromosome ena gene 2096877 2097299 . + . ID=gene:Rv1847;biotype=protein_coding;description=Conserved protein;gene_id=Rv1847;logic_name=ena Chromosome ena mRNA 2096877 2097299 . + . ID=transcript:Rv1847;Parent=gene:Rv1847;biotype=protein_coding;transcript_id=Rv1847 Chromosome ena exon 2096877 2097299 . + . Parent=transcript:Rv1847;Name=Rv1847-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1847-1;rank=1 Chromosome ena CDS 2096877 2097299 . + 0 ID=CDS:Rv1847;Parent=transcript:Rv1847;protein_id=Rv1847 ### -Chromosome ena gene 2097348 2097650 . + . ID=gene:Rv1848;Name=ureA;biotype=protein_coding;description=Urease gamma subunit UreA (urea amidohydrolase);gene_id=Rv1848;logic_name=ena +Chromosome ena gene 2097348 2097650 . + . ID=gene:Rv1848;Name=ureA;biotype=protein_coding;description=Urease gamma subunit UreA (urea amidohydrolase);gene_id=Rv1848;logic_name=ena Chromosome ena mRNA 2097348 2097650 . + . ID=transcript:Rv1848;Parent=gene:Rv1848;Name=ureA-1;biotype=protein_coding;transcript_id=Rv1848 Chromosome ena exon 2097348 2097650 . + . Parent=transcript:Rv1848;Name=Rv1848-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1848-1;rank=1 Chromosome ena CDS 2097348 2097650 . + 0 ID=CDS:Rv1848;Parent=transcript:Rv1848;protein_id=Rv1848 ### -Chromosome ena gene 2097647 2097961 . + . ID=gene:Rv1849;Name=ureB;biotype=protein_coding;description=Urease beta subunit UreB (urea amidohydrolase);gene_id=Rv1849;logic_name=ena +Chromosome ena gene 2097647 2097961 . + . ID=gene:Rv1849;Name=ureB;biotype=protein_coding;description=Urease beta subunit UreB (urea amidohydrolase);gene_id=Rv1849;logic_name=ena Chromosome ena mRNA 2097647 2097961 . + . ID=transcript:Rv1849;Parent=gene:Rv1849;Name=ureB-1;biotype=protein_coding;transcript_id=Rv1849 Chromosome ena exon 2097647 2097961 . + . Parent=transcript:Rv1849;Name=Rv1849-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1849-1;rank=1 Chromosome ena CDS 2097647 2097961 . + 0 ID=CDS:Rv1849;Parent=transcript:Rv1849;protein_id=Rv1849 ### -Chromosome ena gene 2097961 2099694 . + . ID=gene:Rv1850;Name=ureC;biotype=protein_coding;description=Urease alpha subunit UreC (urea amidohydrolase);gene_id=Rv1850;logic_name=ena +Chromosome ena gene 2097961 2099694 . + . ID=gene:Rv1850;Name=ureC;biotype=protein_coding;description=Urease alpha subunit UreC (urea amidohydrolase);gene_id=Rv1850;logic_name=ena Chromosome ena mRNA 2097961 2099694 . + . ID=transcript:Rv1850;Parent=gene:Rv1850;Name=ureC-1;biotype=protein_coding;transcript_id=Rv1850 Chromosome ena exon 2097961 2099694 . + . Parent=transcript:Rv1850;Name=Rv1850-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1850-1;rank=1 Chromosome ena CDS 2097961 2099694 . + 0 ID=CDS:Rv1850;Parent=transcript:Rv1850;protein_id=Rv1850 ### -Chromosome ena gene 2099694 2100329 . + . ID=gene:Rv1851;Name=ureF;biotype=protein_coding;description=Urease accessory protein UreF;gene_id=Rv1851;logic_name=ena +Chromosome ena gene 2099694 2100329 . + . ID=gene:Rv1851;Name=ureF;biotype=protein_coding;description=Urease accessory protein UreF;gene_id=Rv1851;logic_name=ena Chromosome ena mRNA 2099694 2100329 . + . ID=transcript:Rv1851;Parent=gene:Rv1851;Name=ureF-1;biotype=protein_coding;transcript_id=Rv1851 Chromosome ena exon 2099694 2100329 . + . Parent=transcript:Rv1851;Name=Rv1851-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1851-1;rank=1 Chromosome ena CDS 2099694 2100329 . + 0 ID=CDS:Rv1851;Parent=transcript:Rv1851;protein_id=Rv1851 ### -Chromosome ena gene 2100340 2101014 . + . ID=gene:Rv1852;Name=ureG;biotype=protein_coding;description=Urease accessory protein UreG;gene_id=Rv1852;logic_name=ena +Chromosome ena gene 2100340 2101014 . + . ID=gene:Rv1852;Name=ureG;biotype=protein_coding;description=Urease accessory protein UreG;gene_id=Rv1852;logic_name=ena Chromosome ena mRNA 2100340 2101014 . + . ID=transcript:Rv1852;Parent=gene:Rv1852;Name=ureG-1;biotype=protein_coding;transcript_id=Rv1852 Chromosome ena exon 2100340 2101014 . + . Parent=transcript:Rv1852;Name=Rv1852-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1852-1;rank=1 Chromosome ena CDS 2100340 2101014 . + 0 ID=CDS:Rv1852;Parent=transcript:Rv1852;protein_id=Rv1852 ### -Chromosome ena gene 2101022 2101648 . + . ID=gene:Rv1853;Name=ureD;biotype=protein_coding;description=Probable urease accessory protein UreD;gene_id=Rv1853;logic_name=ena +Chromosome ena gene 2101022 2101648 . + . ID=gene:Rv1853;Name=ureD;biotype=protein_coding;description=Probable urease accessory protein UreD;gene_id=Rv1853;logic_name=ena Chromosome ena mRNA 2101022 2101648 . + . ID=transcript:Rv1853;Parent=gene:Rv1853;Name=ureD-1;biotype=protein_coding;transcript_id=Rv1853 Chromosome ena exon 2101022 2101648 . + . Parent=transcript:Rv1853;Name=Rv1853-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1853-1;rank=1 Chromosome ena CDS 2101022 2101648 . + 0 ID=CDS:Rv1853;Parent=transcript:Rv1853;protein_id=Rv1853 ### -Chromosome ena gene 2101651 2103042 . - . ID=gene:Rv1854c;Name=ndh;biotype=protein_coding;description=Probable NADH dehydrogenase Ndh;gene_id=Rv1854c;logic_name=ena +Chromosome ena gene 2101651 2103042 . - . ID=gene:Rv1854c;Name=ndh;biotype=protein_coding;description=Probable NADH dehydrogenase Ndh;gene_id=Rv1854c;logic_name=ena Chromosome ena mRNA 2101651 2103042 . - . ID=transcript:Rv1854c;Parent=gene:Rv1854c;Name=ndh-1;biotype=protein_coding;transcript_id=Rv1854c Chromosome ena exon 2101651 2103042 . - . Parent=transcript:Rv1854c;Name=Rv1854c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1854c-1;rank=1 Chromosome ena CDS 2101651 2103042 . - 0 ID=CDS:Rv1854c;Parent=transcript:Rv1854c;protein_id=Rv1854c ### -Chromosome ena gene 2103184 2104107 . - . ID=gene:Rv1855c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1855c;logic_name=ena +Chromosome ena gene 2103184 2104107 . - . ID=gene:Rv1855c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1855c;logic_name=ena Chromosome ena mRNA 2103184 2104107 . - . ID=transcript:Rv1855c;Parent=gene:Rv1855c;biotype=protein_coding;transcript_id=Rv1855c Chromosome ena exon 2103184 2104107 . - . Parent=transcript:Rv1855c;Name=Rv1855c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1855c-1;rank=1 Chromosome ena CDS 2103184 2104107 . - 0 ID=CDS:Rv1855c;Parent=transcript:Rv1855c;protein_id=Rv1855c ### -Chromosome ena gene 2104146 2104823 . - . ID=gene:Rv1856c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1856c;logic_name=ena +Chromosome ena gene 2104146 2104823 . - . ID=gene:Rv1856c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv1856c;logic_name=ena Chromosome ena mRNA 2104146 2104823 . - . ID=transcript:Rv1856c;Parent=gene:Rv1856c;biotype=protein_coding;transcript_id=Rv1856c Chromosome ena exon 2104146 2104823 . - . Parent=transcript:Rv1856c;Name=Rv1856c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1856c-1;rank=1 Chromosome ena CDS 2104146 2104823 . - 0 ID=CDS:Rv1856c;Parent=transcript:Rv1856c;protein_id=Rv1856c ### -Chromosome ena gene 2104985 2105770 . + . ID=gene:Rv1857;Name=modA;biotype=protein_coding;description=Probable molybdate-binding lipoprotein ModA;gene_id=Rv1857;logic_name=ena +Chromosome ena gene 2104985 2105770 . + . ID=gene:Rv1857;Name=modA;biotype=protein_coding;description=Probable molybdate-binding lipoprotein ModA;gene_id=Rv1857;logic_name=ena Chromosome ena mRNA 2104985 2105770 . + . ID=transcript:Rv1857;Parent=gene:Rv1857;Name=modA-1;biotype=protein_coding;transcript_id=Rv1857 Chromosome ena exon 2104985 2105770 . + . Parent=transcript:Rv1857;Name=Rv1857-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1857-1;rank=1 Chromosome ena CDS 2104985 2105770 . + 0 ID=CDS:Rv1857;Parent=transcript:Rv1857;protein_id=Rv1857 ### -Chromosome ena gene 2105773 2106567 . + . ID=gene:Rv1858;Name=modB;biotype=protein_coding;description=Probable molybdenum-transport integral membrane protein ABC transporter ModB;gene_id=Rv1858;logic_name=ena +Chromosome ena gene 2105773 2106567 . + . ID=gene:Rv1858;Name=modB;biotype=protein_coding;description=Probable molybdenum-transport integral membrane protein ABC transporter ModB;gene_id=Rv1858;logic_name=ena Chromosome ena mRNA 2105773 2106567 . + . ID=transcript:Rv1858;Parent=gene:Rv1858;Name=modB-1;biotype=protein_coding;transcript_id=Rv1858 Chromosome ena exon 2105773 2106567 . + . Parent=transcript:Rv1858;Name=Rv1858-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1858-1;rank=1 Chromosome ena CDS 2105773 2106567 . + 0 ID=CDS:Rv1858;Parent=transcript:Rv1858;protein_id=Rv1858 ### -Chromosome ena gene 2106574 2107683 . + . ID=gene:Rv1859;Name=modC;biotype=protein_coding;description=Probable molybdenum-transport ATP-binding protein ABC transporter ModC;gene_id=Rv1859;logic_name=ena +Chromosome ena gene 2106574 2107683 . + . ID=gene:Rv1859;Name=modC;biotype=protein_coding;description=Probable molybdenum-transport ATP-binding protein ABC transporter ModC;gene_id=Rv1859;logic_name=ena Chromosome ena mRNA 2106574 2107683 . + . ID=transcript:Rv1859;Parent=gene:Rv1859;Name=modC-1;biotype=protein_coding;transcript_id=Rv1859 Chromosome ena exon 2106574 2107683 . + . Parent=transcript:Rv1859;Name=Rv1859-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1859-1;rank=1 Chromosome ena CDS 2106574 2107683 . + 0 ID=CDS:Rv1859;Parent=transcript:Rv1859;protein_id=Rv1859 ### -Chromosome ena gene 2107736 2108713 . + . ID=gene:Rv1860;Name=apa;biotype=protein_coding;description=Alanine and proline rich secreted protein Apa (fibronectin attachment protein) (immunogenic protein MPT32) (antigen MPT-32) (45-kDa glycoprotein) (45/47 kDa antigen);gene_id=Rv1860;logic_name=ena +Chromosome ena gene 2107736 2108713 . + . ID=gene:Rv1860;Name=apa;biotype=protein_coding;description=Alanine and proline rich secreted protein Apa (fibronectin attachment protein) (immunogenic protein MPT32) (antigen MPT-32) (45-kDa glycoprotein) (45/47 kDa antigen);gene_id=Rv1860;logic_name=ena Chromosome ena mRNA 2107736 2108713 . + . ID=transcript:Rv1860;Parent=gene:Rv1860;Name=apa-1;biotype=protein_coding;transcript_id=Rv1860 Chromosome ena exon 2107736 2108713 . + . Parent=transcript:Rv1860;Name=Rv1860-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1860-1;rank=1 Chromosome ena CDS 2107736 2108713 . + 0 ID=CDS:Rv1860;Parent=transcript:Rv1860;protein_id=Rv1860 ### -Chromosome ena gene 2109165 2109470 . + . ID=gene:Rv1861;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1861;logic_name=ena +Chromosome ena gene 2109165 2109470 . + . ID=gene:Rv1861;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv1861;logic_name=ena Chromosome ena mRNA 2109165 2109470 . + . ID=transcript:Rv1861;Parent=gene:Rv1861;biotype=protein_coding;transcript_id=Rv1861 Chromosome ena exon 2109165 2109470 . + . Parent=transcript:Rv1861;Name=Rv1861-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1861-1;rank=1 Chromosome ena CDS 2109165 2109470 . + 0 ID=CDS:Rv1861;Parent=transcript:Rv1861;protein_id=Rv1861 ### -Chromosome ena gene 2109544 2110584 . + . ID=gene:Rv1862;Name=adhA;biotype=protein_coding;description=Probable alcohol dehydrogenase AdhA;gene_id=Rv1862;logic_name=ena +Chromosome ena gene 2109544 2110584 . + . ID=gene:Rv1862;Name=adhA;biotype=protein_coding;description=Probable alcohol dehydrogenase AdhA;gene_id=Rv1862;logic_name=ena Chromosome ena mRNA 2109544 2110584 . + . ID=transcript:Rv1862;Parent=gene:Rv1862;Name=adhA-1;biotype=protein_coding;transcript_id=Rv1862 Chromosome ena exon 2109544 2110584 . + . Parent=transcript:Rv1862;Name=Rv1862-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1862-1;rank=1 Chromosome ena CDS 2109544 2110584 . + 0 ID=CDS:Rv1862;Parent=transcript:Rv1862;protein_id=Rv1862 ### -Chromosome ena gene 2110591 2111361 . - . ID=gene:Rv1863c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1863c;logic_name=ena +Chromosome ena gene 2110591 2111361 . - . ID=gene:Rv1863c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1863c;logic_name=ena Chromosome ena mRNA 2110591 2111361 . - . ID=transcript:Rv1863c;Parent=gene:Rv1863c;biotype=protein_coding;transcript_id=Rv1863c Chromosome ena exon 2110591 2111361 . - . Parent=transcript:Rv1863c;Name=Rv1863c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1863c-1;rank=1 Chromosome ena CDS 2110591 2111361 . - 0 ID=CDS:Rv1863c;Parent=transcript:Rv1863c;protein_id=Rv1863c ### -Chromosome ena gene 2111354 2112109 . - . ID=gene:Rv1864c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1864c;logic_name=ena +Chromosome ena gene 2111354 2112109 . - . ID=gene:Rv1864c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1864c;logic_name=ena Chromosome ena mRNA 2111354 2112109 . - . ID=transcript:Rv1864c;Parent=gene:Rv1864c;biotype=protein_coding;transcript_id=Rv1864c Chromosome ena exon 2111354 2112109 . - . Parent=transcript:Rv1864c;Name=Rv1864c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1864c-1;rank=1 Chromosome ena CDS 2111354 2112109 . - 0 ID=CDS:Rv1864c;Parent=transcript:Rv1864c;protein_id=Rv1864c ### -Chromosome ena gene 2112106 2112966 . - . ID=gene:Rv1865c;biotype=protein_coding;description=Probable short-chain type dehydrogenase;gene_id=Rv1865c;logic_name=ena +Chromosome ena gene 2112106 2112966 . - . ID=gene:Rv1865c;biotype=protein_coding;description=Probable short-chain type dehydrogenase;gene_id=Rv1865c;logic_name=ena Chromosome ena mRNA 2112106 2112966 . - . ID=transcript:Rv1865c;Parent=gene:Rv1865c;biotype=protein_coding;transcript_id=Rv1865c Chromosome ena exon 2112106 2112966 . - . Parent=transcript:Rv1865c;Name=Rv1865c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1865c-1;rank=1 Chromosome ena CDS 2112106 2112966 . - 0 ID=CDS:Rv1865c;Parent=transcript:Rv1865c;protein_id=Rv1865c ### -Chromosome ena gene 2113140 2115476 . + . ID=gene:Rv1866;biotype=protein_coding;description=Conserved protein;gene_id=Rv1866;logic_name=ena +Chromosome ena gene 2113140 2115476 . + . ID=gene:Rv1866;biotype=protein_coding;description=Conserved protein;gene_id=Rv1866;logic_name=ena Chromosome ena mRNA 2113140 2115476 . + . ID=transcript:Rv1866;Parent=gene:Rv1866;biotype=protein_coding;transcript_id=Rv1866 Chromosome ena exon 2113140 2115476 . + . Parent=transcript:Rv1866;Name=Rv1866-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1866-1;rank=1 Chromosome ena CDS 2113140 2115476 . + 0 ID=CDS:Rv1866;Parent=transcript:Rv1866;protein_id=Rv1866 ### -Chromosome ena gene 2115764 2117248 . + . ID=gene:Rv1867;biotype=protein_coding;description=Conserved protein;gene_id=Rv1867;logic_name=ena +Chromosome ena gene 2115764 2117248 . + . ID=gene:Rv1867;biotype=protein_coding;description=Conserved protein;gene_id=Rv1867;logic_name=ena Chromosome ena mRNA 2115764 2117248 . + . ID=transcript:Rv1867;Parent=gene:Rv1867;biotype=protein_coding;transcript_id=Rv1867 Chromosome ena exon 2115764 2117248 . + . Parent=transcript:Rv1867;Name=Rv1867-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1867-1;rank=1 Chromosome ena CDS 2115764 2117248 . + 0 ID=CDS:Rv1867;Parent=transcript:Rv1867;protein_id=Rv1867 ### -Chromosome ena gene 2117347 2119446 . + . ID=gene:Rv1868;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1868;logic_name=ena +Chromosome ena gene 2117347 2119446 . + . ID=gene:Rv1868;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1868;logic_name=ena Chromosome ena mRNA 2117347 2119446 . + . ID=transcript:Rv1868;Parent=gene:Rv1868;biotype=protein_coding;transcript_id=Rv1868 Chromosome ena exon 2117347 2119446 . + . Parent=transcript:Rv1868;Name=Rv1868-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1868-1;rank=1 Chromosome ena CDS 2117347 2119446 . + 0 ID=CDS:Rv1868;Parent=transcript:Rv1868;protein_id=Rv1868 ### -Chromosome ena gene 2119460 2120695 . - . ID=gene:Rv1869c;biotype=protein_coding;description=Probable reductase;gene_id=Rv1869c;logic_name=ena +Chromosome ena gene 2119460 2120695 . - . ID=gene:Rv1869c;biotype=protein_coding;description=Probable reductase;gene_id=Rv1869c;logic_name=ena Chromosome ena mRNA 2119460 2120695 . - . ID=transcript:Rv1869c;Parent=gene:Rv1869c;biotype=protein_coding;transcript_id=Rv1869c Chromosome ena exon 2119460 2120695 . - . Parent=transcript:Rv1869c;Name=Rv1869c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1869c-1;rank=1 Chromosome ena CDS 2119460 2120695 . - 0 ID=CDS:Rv1869c;Parent=transcript:Rv1869c;protein_id=Rv1869c ### -Chromosome ena gene 2120795 2121430 . - . ID=gene:Rv1870c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1870c;logic_name=ena +Chromosome ena gene 2120795 2121430 . - . ID=gene:Rv1870c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1870c;logic_name=ena Chromosome ena mRNA 2120795 2121430 . - . ID=transcript:Rv1870c;Parent=gene:Rv1870c;biotype=protein_coding;transcript_id=Rv1870c Chromosome ena exon 2120795 2121430 . - . Parent=transcript:Rv1870c;Name=Rv1870c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1870c-1;rank=1 Chromosome ena CDS 2120795 2121430 . - 0 ID=CDS:Rv1870c;Parent=transcript:Rv1870c;protein_id=Rv1870c ### -Chromosome ena gene 2121495 2121884 . - . ID=gene:Rv1871c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1871c;logic_name=ena +Chromosome ena gene 2121495 2121884 . - . ID=gene:Rv1871c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1871c;logic_name=ena Chromosome ena mRNA 2121495 2121884 . - . ID=transcript:Rv1871c;Parent=gene:Rv1871c;biotype=protein_coding;transcript_id=Rv1871c Chromosome ena exon 2121495 2121884 . - . Parent=transcript:Rv1871c;Name=Rv1871c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1871c-1;rank=1 Chromosome ena CDS 2121495 2121884 . - 0 ID=CDS:Rv1871c;Parent=transcript:Rv1871c;protein_id=Rv1871c ### -Chromosome ena gene 2121907 2123151 . - . ID=gene:Rv1872c;Name=lldD2;biotype=protein_coding;description=Possible L-lactate dehydrogenase (cytochrome) LldD2;gene_id=Rv1872c;logic_name=ena +Chromosome ena gene 2121907 2123151 . - . ID=gene:Rv1872c;Name=lldD2;biotype=protein_coding;description=Possible L-lactate dehydrogenase (cytochrome) LldD2;gene_id=Rv1872c;logic_name=ena Chromosome ena mRNA 2121907 2123151 . - . ID=transcript:Rv1872c;Parent=gene:Rv1872c;Name=lldD2-1;biotype=protein_coding;transcript_id=Rv1872c Chromosome ena exon 2121907 2123151 . - . Parent=transcript:Rv1872c;Name=Rv1872c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1872c-1;rank=1 Chromosome ena CDS 2121907 2123151 . - 0 ID=CDS:Rv1872c;Parent=transcript:Rv1872c;protein_id=Rv1872c ### -Chromosome ena gene 2123174 2123611 . + . ID=gene:Rv1873;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1873;logic_name=ena +Chromosome ena gene 2123174 2123611 . + . ID=gene:Rv1873;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1873;logic_name=ena Chromosome ena mRNA 2123174 2123611 . + . ID=transcript:Rv1873;Parent=gene:Rv1873;biotype=protein_coding;transcript_id=Rv1873 Chromosome ena exon 2123174 2123611 . + . Parent=transcript:Rv1873;Name=Rv1873-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1873-1;rank=1 Chromosome ena CDS 2123174 2123611 . + 0 ID=CDS:Rv1873;Parent=transcript:Rv1873;protein_id=Rv1873 ### -Chromosome ena gene 2123684 2124370 . + . ID=gene:Rv1874;biotype=protein_coding;description=Unknown protein;gene_id=Rv1874;logic_name=ena +Chromosome ena gene 2123684 2124370 . + . ID=gene:Rv1874;biotype=protein_coding;description=Unknown protein;gene_id=Rv1874;logic_name=ena Chromosome ena mRNA 2123684 2124370 . + . ID=transcript:Rv1874;Parent=gene:Rv1874;biotype=protein_coding;transcript_id=Rv1874 Chromosome ena exon 2123684 2124370 . + . Parent=transcript:Rv1874;Name=Rv1874-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1874-1;rank=1 Chromosome ena CDS 2123684 2124370 . + 0 ID=CDS:Rv1874;Parent=transcript:Rv1874;protein_id=Rv1874 ### -Chromosome ena gene 2124381 2124824 . + . ID=gene:Rv1875;biotype=protein_coding;description=Conserved protein;gene_id=Rv1875;logic_name=ena +Chromosome ena gene 2124381 2124824 . + . ID=gene:Rv1875;biotype=protein_coding;description=Conserved protein;gene_id=Rv1875;logic_name=ena Chromosome ena mRNA 2124381 2124824 . + . ID=transcript:Rv1875;Parent=gene:Rv1875;biotype=protein_coding;transcript_id=Rv1875 Chromosome ena exon 2124381 2124824 . + . Parent=transcript:Rv1875;Name=Rv1875-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1875-1;rank=1 Chromosome ena CDS 2124381 2124824 . + 0 ID=CDS:Rv1875;Parent=transcript:Rv1875;protein_id=Rv1875 ### -Chromosome ena gene 2125340 2125819 . + . ID=gene:Rv1876;Name=bfrA;biotype=protein_coding;description=Probable bacterioferritin BfrA;gene_id=Rv1876;logic_name=ena +Chromosome ena gene 2125340 2125819 . + . ID=gene:Rv1876;Name=bfrA;biotype=protein_coding;description=Probable bacterioferritin BfrA;gene_id=Rv1876;logic_name=ena Chromosome ena mRNA 2125340 2125819 . + . ID=transcript:Rv1876;Parent=gene:Rv1876;Name=bfrA-1;biotype=protein_coding;transcript_id=Rv1876 Chromosome ena exon 2125340 2125819 . + . Parent=transcript:Rv1876;Name=Rv1876-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1876-1;rank=1 Chromosome ena CDS 2125340 2125819 . + 0 ID=CDS:Rv1876;Parent=transcript:Rv1876;protein_id=Rv1876 ### -Chromosome ena gene 2125904 2127967 . + . ID=gene:Rv1877;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1877;logic_name=ena +Chromosome ena gene 2125904 2127967 . + . ID=gene:Rv1877;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1877;logic_name=ena Chromosome ena mRNA 2125904 2127967 . + . ID=transcript:Rv1877;Parent=gene:Rv1877;biotype=protein_coding;transcript_id=Rv1877 Chromosome ena exon 2125904 2127967 . + . Parent=transcript:Rv1877;Name=Rv1877-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1877-1;rank=1 Chromosome ena CDS 2125904 2127967 . + 0 ID=CDS:Rv1877;Parent=transcript:Rv1877;protein_id=Rv1877 ### -Chromosome ena gene 2128022 2129374 . + . ID=gene:Rv1878;Name=glnA3;biotype=protein_coding;description=Probable glutamine synthetase GlnA3 (glutamine synthase) (GS-I);gene_id=Rv1878;logic_name=ena +Chromosome ena gene 2128022 2129374 . + . ID=gene:Rv1878;Name=glnA3;biotype=protein_coding;description=Probable glutamine synthetase GlnA3 (glutamine synthase) (GS-I);gene_id=Rv1878;logic_name=ena Chromosome ena mRNA 2128022 2129374 . + . ID=transcript:Rv1878;Parent=gene:Rv1878;Name=glnA3-1;biotype=protein_coding;transcript_id=Rv1878 Chromosome ena exon 2128022 2129374 . + . Parent=transcript:Rv1878;Name=Rv1878-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1878-1;rank=1 Chromosome ena CDS 2128022 2129374 . + 0 ID=CDS:Rv1878;Parent=transcript:Rv1878;protein_id=Rv1878 ### -Chromosome ena gene 2129377 2130513 . + . ID=gene:Rv1879;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1879;logic_name=ena +Chromosome ena gene 2129377 2130513 . + . ID=gene:Rv1879;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1879;logic_name=ena Chromosome ena mRNA 2129377 2130513 . + . ID=transcript:Rv1879;Parent=gene:Rv1879;biotype=protein_coding;transcript_id=Rv1879 Chromosome ena exon 2129377 2130513 . + . Parent=transcript:Rv1879;Name=Rv1879-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1879-1;rank=1 Chromosome ena CDS 2129377 2130513 . + 0 ID=CDS:Rv1879;Parent=transcript:Rv1879;protein_id=Rv1879 ### -Chromosome ena gene 2130541 2131857 . - . ID=gene:Rv1880c;Name=cyp140;biotype=protein_coding;description=Probable cytochrome P450 140 Cyp140;gene_id=Rv1880c;logic_name=ena +Chromosome ena gene 2130541 2131857 . - . ID=gene:Rv1880c;Name=cyp140;biotype=protein_coding;description=Probable cytochrome P450 140 Cyp140;gene_id=Rv1880c;logic_name=ena Chromosome ena mRNA 2130541 2131857 . - . ID=transcript:Rv1880c;Parent=gene:Rv1880c;Name=cyp140-1;biotype=protein_coding;transcript_id=Rv1880c Chromosome ena exon 2130541 2131857 . - . Parent=transcript:Rv1880c;Name=Rv1880c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1880c-1;rank=1 Chromosome ena CDS 2130541 2131857 . - 0 ID=CDS:Rv1880c;Parent=transcript:Rv1880c;protein_id=Rv1880c ### -Chromosome ena gene 2131907 2132329 . - . ID=gene:Rv1881c;Name=lppE;biotype=protein_coding;description=Possible conserved lipoprotein LppE;gene_id=Rv1881c;logic_name=ena +Chromosome ena gene 2131907 2132329 . - . ID=gene:Rv1881c;Name=lppE;biotype=protein_coding;description=Possible conserved lipoprotein LppE;gene_id=Rv1881c;logic_name=ena Chromosome ena mRNA 2131907 2132329 . - . ID=transcript:Rv1881c;Parent=gene:Rv1881c;Name=lppE-1;biotype=protein_coding;transcript_id=Rv1881c Chromosome ena exon 2131907 2132329 . - . Parent=transcript:Rv1881c;Name=Rv1881c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1881c-1;rank=1 Chromosome ena CDS 2131907 2132329 . - 0 ID=CDS:Rv1881c;Parent=transcript:Rv1881c;protein_id=Rv1881c ### -Chromosome ena gene 2132370 2133203 . - . ID=gene:Rv1882c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1882c;logic_name=ena +Chromosome ena gene 2132370 2133203 . - . ID=gene:Rv1882c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1882c;logic_name=ena Chromosome ena mRNA 2132370 2133203 . - . ID=transcript:Rv1882c;Parent=gene:Rv1882c;biotype=protein_coding;transcript_id=Rv1882c Chromosome ena exon 2132370 2133203 . - . Parent=transcript:Rv1882c;Name=Rv1882c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1882c-1;rank=1 Chromosome ena CDS 2132370 2133203 . - 0 ID=CDS:Rv1882c;Parent=transcript:Rv1882c;protein_id=Rv1882c ### -Chromosome ena gene 2133231 2133692 . - . ID=gene:Rv1883c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1883c;logic_name=ena +Chromosome ena gene 2133231 2133692 . - . ID=gene:Rv1883c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1883c;logic_name=ena Chromosome ena mRNA 2133231 2133692 . - . ID=transcript:Rv1883c;Parent=gene:Rv1883c;biotype=protein_coding;transcript_id=Rv1883c Chromosome ena exon 2133231 2133692 . - . Parent=transcript:Rv1883c;Name=Rv1883c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1883c-1;rank=1 Chromosome ena CDS 2133231 2133692 . - 0 ID=CDS:Rv1883c;Parent=transcript:Rv1883c;protein_id=Rv1883c ### -Chromosome ena gene 2133731 2134261 . - . ID=gene:Rv1884c;Name=rpfC;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfC;gene_id=Rv1884c;logic_name=ena +Chromosome ena gene 2133731 2134261 . - . ID=gene:Rv1884c;Name=rpfC;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfC;gene_id=Rv1884c;logic_name=ena Chromosome ena mRNA 2133731 2134261 . - . ID=transcript:Rv1884c;Parent=gene:Rv1884c;Name=rpfC-1;biotype=protein_coding;transcript_id=Rv1884c Chromosome ena exon 2133731 2134261 . - . Parent=transcript:Rv1884c;Name=Rv1884c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1884c-1;rank=1 Chromosome ena CDS 2133731 2134261 . - 0 ID=CDS:Rv1884c;Parent=transcript:Rv1884c;protein_id=Rv1884c ### -Chromosome ena gene 2134273 2134872 . - . ID=gene:Rv1885c;biotype=protein_coding;description=Chorismate mutase;gene_id=Rv1885c;logic_name=ena +Chromosome ena gene 2134273 2134872 . - . ID=gene:Rv1885c;biotype=protein_coding;description=Chorismate mutase;gene_id=Rv1885c;logic_name=ena Chromosome ena mRNA 2134273 2134872 . - . ID=transcript:Rv1885c;Parent=gene:Rv1885c;biotype=protein_coding;transcript_id=Rv1885c Chromosome ena exon 2134273 2134872 . - . Parent=transcript:Rv1885c;Name=Rv1885c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1885c-1;rank=1 Chromosome ena CDS 2134273 2134872 . - 0 ID=CDS:Rv1885c;Parent=transcript:Rv1885c;protein_id=Rv1885c ### -Chromosome ena gene 2134890 2135867 . - . ID=gene:Rv1886c;Name=fbpB;biotype=protein_coding;description=Secreted antigen 85-B FbpB (85B) (antigen 85 complex B) (mycolyl transferase 85B) (fibronectin-binding protein B) (extracellular alpha-antigen);gene_id=Rv1886c;logic_name=ena +Chromosome ena gene 2134890 2135867 . - . ID=gene:Rv1886c;Name=fbpB;biotype=protein_coding;description=Secreted antigen 85-B FbpB (85B) (antigen 85 complex B) (mycolyl transferase 85B) (fibronectin-binding protein B) (extracellular alpha-antigen);gene_id=Rv1886c;logic_name=ena Chromosome ena mRNA 2134890 2135867 . - . ID=transcript:Rv1886c;Parent=gene:Rv1886c;Name=fbpB-1;biotype=protein_coding;transcript_id=Rv1886c Chromosome ena exon 2134890 2135867 . - . Parent=transcript:Rv1886c;Name=Rv1886c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1886c-1;rank=1 Chromosome ena CDS 2134890 2135867 . - 0 ID=CDS:Rv1886c;Parent=transcript:Rv1886c;protein_id=Rv1886c ### -Chromosome ena gene 2136258 2137400 . + . ID=gene:Rv1887;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1887;logic_name=ena +Chromosome ena gene 2136258 2137400 . + . ID=gene:Rv1887;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1887;logic_name=ena Chromosome ena mRNA 2136258 2137400 . + . ID=transcript:Rv1887;Parent=gene:Rv1887;biotype=protein_coding;transcript_id=Rv1887 Chromosome ena exon 2136258 2137400 . + . Parent=transcript:Rv1887;Name=Rv1887-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1887-1;rank=1 Chromosome ena CDS 2136258 2137400 . + 0 ID=CDS:Rv1887;Parent=transcript:Rv1887;protein_id=Rv1887 ### -Chromosome ena gene 2137519 2138079 . - . ID=gene:Rv1888c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv1888c;logic_name=ena +Chromosome ena gene 2137519 2138079 . - . ID=gene:Rv1888c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv1888c;logic_name=ena Chromosome ena mRNA 2137519 2138079 . - . ID=transcript:Rv1888c;Parent=gene:Rv1888c;biotype=protein_coding;transcript_id=Rv1888c Chromosome ena exon 2137519 2138079 . - . Parent=transcript:Rv1888c;Name=Rv1888c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1888c-1;rank=1 Chromosome ena CDS 2137519 2138079 . - 0 ID=CDS:Rv1888c;Parent=transcript:Rv1888c;protein_id=Rv1888c ### -Chromosome ena gene 2138444 2138617 . - . ID=gene:Rv1888A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1888A;logic_name=ena +Chromosome ena gene 2138444 2138617 . - . ID=gene:Rv1888A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1888A;logic_name=ena Chromosome ena mRNA 2138444 2138617 . - . ID=transcript:Rv1888A;Parent=gene:Rv1888A;biotype=protein_coding;transcript_id=Rv1888A Chromosome ena exon 2138444 2138617 . - . Parent=transcript:Rv1888A;Name=Rv1888A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1888A-1;rank=1 Chromosome ena CDS 2138444 2138617 . - 0 ID=CDS:Rv1888A;Parent=transcript:Rv1888A;protein_id=Rv1888A ### -Chromosome ena gene 2138661 2139017 . - . ID=gene:Rv1889c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1889c;logic_name=ena +Chromosome ena gene 2138661 2139017 . - . ID=gene:Rv1889c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1889c;logic_name=ena Chromosome ena mRNA 2138661 2139017 . - . ID=transcript:Rv1889c;Parent=gene:Rv1889c;biotype=protein_coding;transcript_id=Rv1889c Chromosome ena exon 2138661 2139017 . - . Parent=transcript:Rv1889c;Name=Rv1889c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1889c-1;rank=1 Chromosome ena CDS 2138661 2139017 . - 0 ID=CDS:Rv1889c;Parent=transcript:Rv1889c;protein_id=Rv1889c ### -Chromosome ena gene 2139076 2139687 . - . ID=gene:Rv1890c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1890c;logic_name=ena +Chromosome ena gene 2139076 2139687 . - . ID=gene:Rv1890c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1890c;logic_name=ena Chromosome ena mRNA 2139076 2139687 . - . ID=transcript:Rv1890c;Parent=gene:Rv1890c;biotype=protein_coding;transcript_id=Rv1890c Chromosome ena exon 2139076 2139687 . - . Parent=transcript:Rv1890c;Name=Rv1890c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1890c-1;rank=1 Chromosome ena CDS 2139076 2139687 . - 0 ID=CDS:Rv1890c;Parent=transcript:Rv1890c;protein_id=Rv1890c @@ -9901,642 +9901,642 @@ Chromosome ena transcript 2139419 2139656 . + . ID=transcript:EBG00000313322;Par Chromosome ena exon 2139419 2139656 . + . Parent=transcript:EBG00000313322;Name=EBG00000313322;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313322;rank=1 ### Chromosome ena_gene biological_region 2139419 2139656 . + . external_name=AL123456.3:gene:2139419..2139656;logic_name=ena_gene -Chromosome ena gene 2139741 2140148 . + . ID=gene:Rv1891;biotype=protein_coding;description=Conserved protein;gene_id=Rv1891;logic_name=ena +Chromosome ena gene 2139741 2140148 . + . ID=gene:Rv1891;biotype=protein_coding;description=Conserved protein;gene_id=Rv1891;logic_name=ena Chromosome ena mRNA 2139741 2140148 . + . ID=transcript:Rv1891;Parent=gene:Rv1891;biotype=protein_coding;transcript_id=Rv1891 Chromosome ena exon 2139741 2140148 . + . Parent=transcript:Rv1891;Name=Rv1891-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1891-1;rank=1 Chromosome ena CDS 2139741 2140148 . + 0 ID=CDS:Rv1891;Parent=transcript:Rv1891;protein_id=Rv1891 ### -Chromosome ena gene 2140165 2140476 . + . ID=gene:Rv1892;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1892;logic_name=ena +Chromosome ena gene 2140165 2140476 . + . ID=gene:Rv1892;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1892;logic_name=ena Chromosome ena mRNA 2140165 2140476 . + . ID=transcript:Rv1892;Parent=gene:Rv1892;biotype=protein_coding;transcript_id=Rv1892 Chromosome ena exon 2140165 2140476 . + . Parent=transcript:Rv1892;Name=Rv1892-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1892-1;rank=1 Chromosome ena CDS 2140165 2140476 . + 0 ID=CDS:Rv1892;Parent=transcript:Rv1892;protein_id=Rv1892 ### -Chromosome ena gene 2140486 2140704 . + . ID=gene:Rv1893;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1893;logic_name=ena +Chromosome ena gene 2140486 2140704 . + . ID=gene:Rv1893;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1893;logic_name=ena Chromosome ena mRNA 2140486 2140704 . + . ID=transcript:Rv1893;Parent=gene:Rv1893;biotype=protein_coding;transcript_id=Rv1893 Chromosome ena exon 2140486 2140704 . + . Parent=transcript:Rv1893;Name=Rv1893-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1893-1;rank=1 Chromosome ena CDS 2140486 2140704 . + 0 ID=CDS:Rv1893;Parent=transcript:Rv1893;protein_id=Rv1893 ### -Chromosome ena gene 2140739 2141869 . - . ID=gene:Rv1894c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1894c;logic_name=ena +Chromosome ena gene 2140739 2141869 . - . ID=gene:Rv1894c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1894c;logic_name=ena Chromosome ena mRNA 2140739 2141869 . - . ID=transcript:Rv1894c;Parent=gene:Rv1894c;biotype=protein_coding;transcript_id=Rv1894c Chromosome ena exon 2140739 2141869 . - . Parent=transcript:Rv1894c;Name=Rv1894c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1894c-1;rank=1 Chromosome ena CDS 2140739 2141869 . - 0 ID=CDS:Rv1894c;Parent=transcript:Rv1894c;protein_id=Rv1894c ### -Chromosome ena gene 2142521 2143675 . + . ID=gene:Rv1895;biotype=protein_coding;description=Possible dehydrogenase;gene_id=Rv1895;logic_name=ena +Chromosome ena gene 2142521 2143675 . + . ID=gene:Rv1895;biotype=protein_coding;description=Possible dehydrogenase;gene_id=Rv1895;logic_name=ena Chromosome ena mRNA 2142521 2143675 . + . ID=transcript:Rv1895;Parent=gene:Rv1895;biotype=protein_coding;transcript_id=Rv1895 Chromosome ena exon 2142521 2143675 . + . Parent=transcript:Rv1895;Name=Rv1895-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1895-1;rank=1 Chromosome ena CDS 2142521 2143675 . + 0 ID=CDS:Rv1895;Parent=transcript:Rv1895;protein_id=Rv1895 ### -Chromosome ena gene 2143535 2144446 . - . ID=gene:Rv1896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1896c;logic_name=ena +Chromosome ena gene 2143535 2144446 . - . ID=gene:Rv1896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1896c;logic_name=ena Chromosome ena mRNA 2143535 2144446 . - . ID=transcript:Rv1896c;Parent=gene:Rv1896c;biotype=protein_coding;transcript_id=Rv1896c Chromosome ena exon 2143535 2144446 . - . Parent=transcript:Rv1896c;Name=Rv1896c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1896c-1;rank=1 Chromosome ena CDS 2143535 2144446 . - 0 ID=CDS:Rv1896c;Parent=transcript:Rv1896c;protein_id=Rv1896c ### -Chromosome ena gene 2144451 2144882 . - . ID=gene:Rv1897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1897c;logic_name=ena +Chromosome ena gene 2144451 2144882 . - . ID=gene:Rv1897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1897c;logic_name=ena Chromosome ena mRNA 2144451 2144882 . - . ID=transcript:Rv1897c;Parent=gene:Rv1897c;biotype=protein_coding;transcript_id=Rv1897c Chromosome ena exon 2144451 2144882 . - . Parent=transcript:Rv1897c;Name=Rv1897c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1897c-1;rank=1 Chromosome ena CDS 2144451 2144882 . - 0 ID=CDS:Rv1897c;Parent=transcript:Rv1897c;protein_id=Rv1897c ### -Chromosome ena gene 2144940 2145248 . + . ID=gene:Rv1898;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1898;logic_name=ena +Chromosome ena gene 2144940 2145248 . + . ID=gene:Rv1898;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1898;logic_name=ena Chromosome ena mRNA 2144940 2145248 . + . ID=transcript:Rv1898;Parent=gene:Rv1898;biotype=protein_coding;transcript_id=Rv1898 Chromosome ena exon 2144940 2145248 . + . Parent=transcript:Rv1898;Name=Rv1898-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1898-1;rank=1 Chromosome ena CDS 2144940 2145248 . + 0 ID=CDS:Rv1898;Parent=transcript:Rv1898;protein_id=Rv1898 ### -Chromosome ena gene 2145214 2146245 . - . ID=gene:Rv1899c;Name=lppD;biotype=protein_coding;description=Possible lipoprotein LppD;gene_id=Rv1899c;logic_name=ena +Chromosome ena gene 2145214 2146245 . - . ID=gene:Rv1899c;Name=lppD;biotype=protein_coding;description=Possible lipoprotein LppD;gene_id=Rv1899c;logic_name=ena Chromosome ena mRNA 2145214 2146245 . - . ID=transcript:Rv1899c;Parent=gene:Rv1899c;Name=lppD-1;biotype=protein_coding;transcript_id=Rv1899c Chromosome ena exon 2145214 2146245 . - . Parent=transcript:Rv1899c;Name=Rv1899c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1899c-1;rank=1 Chromosome ena CDS 2145214 2146245 . - 0 ID=CDS:Rv1899c;Parent=transcript:Rv1899c;protein_id=Rv1899c ### -Chromosome ena gene 2146245 2147633 . - . ID=gene:Rv1900c;Name=lipJ;biotype=protein_coding;description=Probable lignin peroxidase LipJ;gene_id=Rv1900c;logic_name=ena +Chromosome ena gene 2146245 2147633 . - . ID=gene:Rv1900c;Name=lipJ;biotype=protein_coding;description=Probable lignin peroxidase LipJ;gene_id=Rv1900c;logic_name=ena Chromosome ena mRNA 2146245 2147633 . - . ID=transcript:Rv1900c;Parent=gene:Rv1900c;Name=lipJ-1;biotype=protein_coding;transcript_id=Rv1900c Chromosome ena exon 2146245 2147633 . - . Parent=transcript:Rv1900c;Name=Rv1900c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1900c-1;rank=1 Chromosome ena CDS 2146245 2147633 . - 0 ID=CDS:Rv1900c;Parent=transcript:Rv1900c;protein_id=Rv1900c ### -Chromosome ena gene 2147662 2148954 . + . ID=gene:Rv1901;Name=cinA;biotype=protein_coding;description=Probable CinA-like protein CinA;gene_id=Rv1901;logic_name=ena +Chromosome ena gene 2147662 2148954 . + . ID=gene:Rv1901;Name=cinA;biotype=protein_coding;description=Probable CinA-like protein CinA;gene_id=Rv1901;logic_name=ena Chromosome ena mRNA 2147662 2148954 . + . ID=transcript:Rv1901;Parent=gene:Rv1901;Name=cinA-1;biotype=protein_coding;transcript_id=Rv1901 Chromosome ena exon 2147662 2148954 . + . Parent=transcript:Rv1901;Name=Rv1901-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1901-1;rank=1 Chromosome ena CDS 2147662 2148954 . + 0 ID=CDS:Rv1901;Parent=transcript:Rv1901;protein_id=Rv1901 ### -Chromosome ena gene 2149006 2150274 . - . ID=gene:Rv1902c;Name=nanT;biotype=protein_coding;description=Probable sialic acid-transport integral membrane protein NanT;gene_id=Rv1902c;logic_name=ena +Chromosome ena gene 2149006 2150274 . - . ID=gene:Rv1902c;Name=nanT;biotype=protein_coding;description=Probable sialic acid-transport integral membrane protein NanT;gene_id=Rv1902c;logic_name=ena Chromosome ena mRNA 2149006 2150274 . - . ID=transcript:Rv1902c;Parent=gene:Rv1902c;Name=nanT-1;biotype=protein_coding;transcript_id=Rv1902c Chromosome ena exon 2149006 2150274 . - . Parent=transcript:Rv1902c;Name=Rv1902c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1902c-1;rank=1 Chromosome ena CDS 2149006 2150274 . - 0 ID=CDS:Rv1902c;Parent=transcript:Rv1902c;protein_id=Rv1902c ### -Chromosome ena gene 2150364 2150768 . + . ID=gene:Rv1903;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1903;logic_name=ena +Chromosome ena gene 2150364 2150768 . + . ID=gene:Rv1903;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1903;logic_name=ena Chromosome ena mRNA 2150364 2150768 . + . ID=transcript:Rv1903;Parent=gene:Rv1903;biotype=protein_coding;transcript_id=Rv1903 Chromosome ena exon 2150364 2150768 . + . Parent=transcript:Rv1903;Name=Rv1903-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1903-1;rank=1 Chromosome ena CDS 2150364 2150768 . + 0 ID=CDS:Rv1903;Parent=transcript:Rv1903;protein_id=Rv1903 ### -Chromosome ena gene 2150954 2151385 . + . ID=gene:Rv1904;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1904;logic_name=ena +Chromosome ena gene 2150954 2151385 . + . ID=gene:Rv1904;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1904;logic_name=ena Chromosome ena mRNA 2150954 2151385 . + . ID=transcript:Rv1904;Parent=gene:Rv1904;biotype=protein_coding;transcript_id=Rv1904 Chromosome ena exon 2150954 2151385 . + . Parent=transcript:Rv1904;Name=Rv1904-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1904-1;rank=1 Chromosome ena CDS 2150954 2151385 . + 0 ID=CDS:Rv1904;Parent=transcript:Rv1904;protein_id=Rv1904 ### -Chromosome ena gene 2151433 2152395 . - . ID=gene:Rv1905c;Name=aao;biotype=protein_coding;description=Probable D-amino acid oxidase Aao;gene_id=Rv1905c;logic_name=ena +Chromosome ena gene 2151433 2152395 . - . ID=gene:Rv1905c;Name=aao;biotype=protein_coding;description=Probable D-amino acid oxidase Aao;gene_id=Rv1905c;logic_name=ena Chromosome ena mRNA 2151433 2152395 . - . ID=transcript:Rv1905c;Parent=gene:Rv1905c;Name=aao-1;biotype=protein_coding;transcript_id=Rv1905c Chromosome ena exon 2151433 2152395 . - . Parent=transcript:Rv1905c;Name=Rv1905c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1905c-1;rank=1 Chromosome ena CDS 2151433 2152395 . - 0 ID=CDS:Rv1905c;Parent=transcript:Rv1905c;protein_id=Rv1905c ### -Chromosome ena gene 2152425 2152895 . - . ID=gene:Rv1906c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1906c;logic_name=ena +Chromosome ena gene 2152425 2152895 . - . ID=gene:Rv1906c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1906c;logic_name=ena Chromosome ena mRNA 2152425 2152895 . - . ID=transcript:Rv1906c;Parent=gene:Rv1906c;biotype=protein_coding;transcript_id=Rv1906c Chromosome ena exon 2152425 2152895 . - . Parent=transcript:Rv1906c;Name=Rv1906c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1906c-1;rank=1 Chromosome ena CDS 2152425 2152895 . - 0 ID=CDS:Rv1906c;Parent=transcript:Rv1906c;protein_id=Rv1906c ### -Chromosome ena gene 2153235 2153882 . - . ID=gene:Rv1907c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1907c;logic_name=ena +Chromosome ena gene 2153235 2153882 . - . ID=gene:Rv1907c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1907c;logic_name=ena Chromosome ena mRNA 2153235 2153882 . - . ID=transcript:Rv1907c;Parent=gene:Rv1907c;biotype=protein_coding;transcript_id=Rv1907c Chromosome ena exon 2153235 2153882 . - . Parent=transcript:Rv1907c;Name=Rv1907c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1907c-1;rank=1 Chromosome ena CDS 2153235 2153882 . - 0 ID=CDS:Rv1907c;Parent=transcript:Rv1907c;protein_id=Rv1907c ### -Chromosome ena gene 2153889 2156111 . - . ID=gene:Rv1908c;Name=katG;biotype=protein_coding;description=Catalase-peroxidase-peroxynitritase T KatG;gene_id=Rv1908c;logic_name=ena +Chromosome ena gene 2153889 2156111 . - . ID=gene:Rv1908c;Name=katG;biotype=protein_coding;description=Catalase-peroxidase-peroxynitritase T KatG;gene_id=Rv1908c;logic_name=ena Chromosome ena mRNA 2153889 2156111 . - . ID=transcript:Rv1908c;Parent=gene:Rv1908c;Name=katG-1;biotype=protein_coding;transcript_id=Rv1908c Chromosome ena exon 2153889 2156111 . - . Parent=transcript:Rv1908c;Name=Rv1908c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1908c-1;rank=1 Chromosome ena CDS 2153889 2156111 . - 0 ID=CDS:Rv1908c;Parent=transcript:Rv1908c;protein_id=Rv1908c ### -Chromosome ena gene 2156149 2156592 . - . ID=gene:Rv1909c;Name=furA;biotype=protein_coding;description=Ferric uptake regulation protein FurA (fur);gene_id=Rv1909c;logic_name=ena +Chromosome ena gene 2156149 2156592 . - . ID=gene:Rv1909c;Name=furA;biotype=protein_coding;description=Ferric uptake regulation protein FurA (fur);gene_id=Rv1909c;logic_name=ena Chromosome ena mRNA 2156149 2156592 . - . ID=transcript:Rv1909c;Parent=gene:Rv1909c;Name=furA-1;biotype=protein_coding;transcript_id=Rv1909c Chromosome ena exon 2156149 2156592 . - . Parent=transcript:Rv1909c;Name=Rv1909c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1909c-1;rank=1 Chromosome ena CDS 2156149 2156592 . - 0 ID=CDS:Rv1909c;Parent=transcript:Rv1909c;protein_id=Rv1909c ### -Chromosome ena gene 2156706 2157299 . - . ID=gene:Rv1910c;biotype=protein_coding;description=Probable exported protein;gene_id=Rv1910c;logic_name=ena +Chromosome ena gene 2156706 2157299 . - . ID=gene:Rv1910c;biotype=protein_coding;description=Probable exported protein;gene_id=Rv1910c;logic_name=ena Chromosome ena mRNA 2156706 2157299 . - . ID=transcript:Rv1910c;Parent=gene:Rv1910c;biotype=protein_coding;transcript_id=Rv1910c Chromosome ena exon 2156706 2157299 . - . Parent=transcript:Rv1910c;Name=Rv1910c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1910c-1;rank=1 Chromosome ena CDS 2156706 2157299 . - 0 ID=CDS:Rv1910c;Parent=transcript:Rv1910c;protein_id=Rv1910c ### -Chromosome ena gene 2157382 2157987 . - . ID=gene:Rv1911c;Name=lppC;biotype=protein_coding;description=Probable lipoprotein LppC;gene_id=Rv1911c;logic_name=ena +Chromosome ena gene 2157382 2157987 . - . ID=gene:Rv1911c;Name=lppC;biotype=protein_coding;description=Probable lipoprotein LppC;gene_id=Rv1911c;logic_name=ena Chromosome ena mRNA 2157382 2157987 . - . ID=transcript:Rv1911c;Parent=gene:Rv1911c;Name=lppC-1;biotype=protein_coding;transcript_id=Rv1911c Chromosome ena exon 2157382 2157987 . - . Parent=transcript:Rv1911c;Name=Rv1911c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1911c-1;rank=1 Chromosome ena CDS 2157382 2157987 . - 0 ID=CDS:Rv1911c;Parent=transcript:Rv1911c;protein_id=Rv1911c ### -Chromosome ena gene 2158087 2159091 . - . ID=gene:Rv1912c;Name=fadB5;biotype=protein_coding;description=Possible oxidoreductase FadB5;gene_id=Rv1912c;logic_name=ena +Chromosome ena gene 2158087 2159091 . - . ID=gene:Rv1912c;Name=fadB5;biotype=protein_coding;description=Possible oxidoreductase FadB5;gene_id=Rv1912c;logic_name=ena Chromosome ena mRNA 2158087 2159091 . - . ID=transcript:Rv1912c;Parent=gene:Rv1912c;Name=fadB5-1;biotype=protein_coding;transcript_id=Rv1912c Chromosome ena exon 2158087 2159091 . - . Parent=transcript:Rv1912c;Name=Rv1912c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1912c-1;rank=1 Chromosome ena CDS 2158087 2159091 . - 0 ID=CDS:Rv1912c;Parent=transcript:Rv1912c;protein_id=Rv1912c ### -Chromosome ena gene 2159191 2159943 . + . ID=gene:Rv1913;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1913;logic_name=ena +Chromosome ena gene 2159191 2159943 . + . ID=gene:Rv1913;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1913;logic_name=ena Chromosome ena mRNA 2159191 2159943 . + . ID=transcript:Rv1913;Parent=gene:Rv1913;biotype=protein_coding;transcript_id=Rv1913 Chromosome ena exon 2159191 2159943 . + . Parent=transcript:Rv1913;Name=Rv1913-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1913-1;rank=1 Chromosome ena CDS 2159191 2159943 . + 0 ID=CDS:Rv1913;Parent=transcript:Rv1913;protein_id=Rv1913 ### -Chromosome ena gene 2159921 2160328 . - . ID=gene:Rv1914c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1914c;logic_name=ena +Chromosome ena gene 2159921 2160328 . - . ID=gene:Rv1914c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1914c;logic_name=ena Chromosome ena mRNA 2159921 2160328 . - . ID=transcript:Rv1914c;Parent=gene:Rv1914c;biotype=protein_coding;transcript_id=Rv1914c Chromosome ena exon 2159921 2160328 . - . Parent=transcript:Rv1914c;Name=Rv1914c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1914c-1;rank=1 Chromosome ena CDS 2159921 2160328 . - 0 ID=CDS:Rv1914c;Parent=transcript:Rv1914c;protein_id=Rv1914c ### -Chromosome ena gene 2160463 2161566 . + . ID=gene:Rv1915;Name=aceAa;biotype=protein_coding;description=Probable isocitrate lyase AceAa [first part] (isocitrase) (isocitratase) (Icl);gene_id=Rv1915;logic_name=ena +Chromosome ena gene 2160463 2161566 . + . ID=gene:Rv1915;Name=aceAa;biotype=protein_coding;description=Probable isocitrate lyase AceAa [first part] (isocitrase) (isocitratase) (Icl);gene_id=Rv1915;logic_name=ena Chromosome ena mRNA 2160463 2161566 . + . ID=transcript:Rv1915;Parent=gene:Rv1915;Name=aceAa-1;biotype=protein_coding;transcript_id=Rv1915 Chromosome ena exon 2160463 2161566 . + . Parent=transcript:Rv1915;Name=Rv1915-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1915-1;rank=1 Chromosome ena CDS 2160463 2161566 . + 0 ID=CDS:Rv1915;Parent=transcript:Rv1915;protein_id=Rv1915 ### -Chromosome ena gene 2161566 2162762 . + . ID=gene:Rv1916;Name=aceAb;biotype=protein_coding;description=Probable isocitrate lyase AceAb [second part] (isocitrase) (isocitratase) (Icl);gene_id=Rv1916;logic_name=ena +Chromosome ena gene 2161566 2162762 . + . ID=gene:Rv1916;Name=aceAb;biotype=protein_coding;description=Probable isocitrate lyase AceAb [second part] (isocitrase) (isocitratase) (Icl);gene_id=Rv1916;logic_name=ena Chromosome ena mRNA 2161566 2162762 . + . ID=transcript:Rv1916;Parent=gene:Rv1916;Name=aceAb-1;biotype=protein_coding;transcript_id=Rv1916 Chromosome ena exon 2161566 2162762 . + . Parent=transcript:Rv1916;Name=Rv1916-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1916-1;rank=1 Chromosome ena CDS 2161566 2162762 . + 0 ID=CDS:Rv1916;Parent=transcript:Rv1916;protein_id=Rv1916 ### -Chromosome ena gene 2162932 2167311 . - . ID=gene:Rv1917c;Name=PPE34;biotype=protein_coding;description=PPE family protein PPE34;gene_id=Rv1917c;logic_name=ena +Chromosome ena gene 2162932 2167311 . - . ID=gene:Rv1917c;Name=PPE34;biotype=protein_coding;description=PPE family protein PPE34;gene_id=Rv1917c;logic_name=ena Chromosome ena mRNA 2162932 2167311 . - . ID=transcript:Rv1917c;Parent=gene:Rv1917c;Name=PPE34-1;biotype=protein_coding;transcript_id=Rv1917c Chromosome ena exon 2162932 2167311 . - . Parent=transcript:Rv1917c;Name=Rv1917c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1917c-1;rank=1 Chromosome ena CDS 2162932 2167311 . - 0 ID=CDS:Rv1917c;Parent=transcript:Rv1917c;protein_id=Rv1917c ### -Chromosome ena gene 2167649 2170612 . - . ID=gene:Rv1918c;Name=PPE35;biotype=protein_coding;description=PPE family protein PPE35;gene_id=Rv1918c;logic_name=ena +Chromosome ena gene 2167649 2170612 . - . ID=gene:Rv1918c;Name=PPE35;biotype=protein_coding;description=PPE family protein PPE35;gene_id=Rv1918c;logic_name=ena Chromosome ena mRNA 2167649 2170612 . - . ID=transcript:Rv1918c;Parent=gene:Rv1918c;Name=PPE35-1;biotype=protein_coding;transcript_id=Rv1918c Chromosome ena exon 2167649 2170612 . - . Parent=transcript:Rv1918c;Name=Rv1918c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1918c-1;rank=1 Chromosome ena CDS 2167649 2170612 . - 0 ID=CDS:Rv1918c;Parent=transcript:Rv1918c;protein_id=Rv1918c ### -Chromosome ena gene 2171061 2171525 . - . ID=gene:Rv1919c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1919c;logic_name=ena +Chromosome ena gene 2171061 2171525 . - . ID=gene:Rv1919c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1919c;logic_name=ena Chromosome ena mRNA 2171061 2171525 . - . ID=transcript:Rv1919c;Parent=gene:Rv1919c;biotype=protein_coding;transcript_id=Rv1919c Chromosome ena exon 2171061 2171525 . - . Parent=transcript:Rv1919c;Name=Rv1919c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1919c-1;rank=1 Chromosome ena CDS 2171061 2171525 . - 0 ID=CDS:Rv1919c;Parent=transcript:Rv1919c;protein_id=Rv1919c ### -Chromosome ena gene 2171623 2172486 . + . ID=gene:Rv1920;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1920;logic_name=ena +Chromosome ena gene 2171623 2172486 . + . ID=gene:Rv1920;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv1920;logic_name=ena Chromosome ena mRNA 2171623 2172486 . + . ID=transcript:Rv1920;Parent=gene:Rv1920;biotype=protein_coding;transcript_id=Rv1920 Chromosome ena exon 2171623 2172486 . + . Parent=transcript:Rv1920;Name=Rv1920-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1920-1;rank=1 Chromosome ena CDS 2171623 2172486 . + 0 ID=CDS:Rv1920;Parent=transcript:Rv1920;protein_id=Rv1920 ### -Chromosome ena gene 2172524 2173795 . - . ID=gene:Rv1921c;Name=lppF;biotype=protein_coding;description=Probable conserved lipoprotein LppF;gene_id=Rv1921c;logic_name=ena +Chromosome ena gene 2172524 2173795 . - . ID=gene:Rv1921c;Name=lppF;biotype=protein_coding;description=Probable conserved lipoprotein LppF;gene_id=Rv1921c;logic_name=ena Chromosome ena mRNA 2172524 2173795 . - . ID=transcript:Rv1921c;Parent=gene:Rv1921c;Name=lppF-1;biotype=protein_coding;transcript_id=Rv1921c Chromosome ena exon 2172524 2173795 . - . Parent=transcript:Rv1921c;Name=Rv1921c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1921c-1;rank=1 Chromosome ena CDS 2172524 2173795 . - 0 ID=CDS:Rv1921c;Parent=transcript:Rv1921c;protein_id=Rv1921c ### -Chromosome ena gene 2174067 2175182 . + . ID=gene:Rv1922;biotype=protein_coding;description=Probable conserved lipoprotein;gene_id=Rv1922;logic_name=ena +Chromosome ena gene 2174067 2175182 . + . ID=gene:Rv1922;biotype=protein_coding;description=Probable conserved lipoprotein;gene_id=Rv1922;logic_name=ena Chromosome ena mRNA 2174067 2175182 . + . ID=transcript:Rv1922;Parent=gene:Rv1922;biotype=protein_coding;transcript_id=Rv1922 Chromosome ena exon 2174067 2175182 . + . Parent=transcript:Rv1922;Name=Rv1922-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1922-1;rank=1 Chromosome ena CDS 2174067 2175182 . + 0 ID=CDS:Rv1922;Parent=transcript:Rv1922;protein_id=Rv1922 ### -Chromosome ena gene 2175173 2176513 . + . ID=gene:Rv1923;Name=lipD;biotype=protein_coding;description=Probable lipase LipD;gene_id=Rv1923;logic_name=ena +Chromosome ena gene 2175173 2176513 . + . ID=gene:Rv1923;Name=lipD;biotype=protein_coding;description=Probable lipase LipD;gene_id=Rv1923;logic_name=ena Chromosome ena mRNA 2175173 2176513 . + . ID=transcript:Rv1923;Parent=gene:Rv1923;Name=lipD-1;biotype=protein_coding;transcript_id=Rv1923 Chromosome ena exon 2175173 2176513 . + . Parent=transcript:Rv1923;Name=Rv1923-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1923-1;rank=1 Chromosome ena CDS 2175173 2176513 . + 0 ID=CDS:Rv1923;Parent=transcript:Rv1923;protein_id=Rv1923 ### -Chromosome ena gene 2176550 2176930 . - . ID=gene:Rv1924c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1924c;logic_name=ena +Chromosome ena gene 2176550 2176930 . - . ID=gene:Rv1924c;biotype=protein_coding;description=Unknown protein;gene_id=Rv1924c;logic_name=ena Chromosome ena mRNA 2176550 2176930 . - . ID=transcript:Rv1924c;Parent=gene:Rv1924c;biotype=protein_coding;transcript_id=Rv1924c Chromosome ena exon 2176550 2176930 . - . Parent=transcript:Rv1924c;Name=Rv1924c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1924c-1;rank=1 Chromosome ena CDS 2176550 2176930 . - 0 ID=CDS:Rv1924c;Parent=transcript:Rv1924c;protein_id=Rv1924c ### -Chromosome ena gene 2177087 2178949 . + . ID=gene:Rv1925;Name=fadD31;biotype=protein_coding;description=Probable acyl-CoA ligase FadD31 (acyl-CoA synthetase) (acyl-CoA synthase);gene_id=Rv1925;logic_name=ena +Chromosome ena gene 2177087 2178949 . + . ID=gene:Rv1925;Name=fadD31;biotype=protein_coding;description=Probable acyl-CoA ligase FadD31 (acyl-CoA synthetase) (acyl-CoA synthase);gene_id=Rv1925;logic_name=ena Chromosome ena mRNA 2177087 2178949 . + . ID=transcript:Rv1925;Parent=gene:Rv1925;Name=fadD31-1;biotype=protein_coding;transcript_id=Rv1925 Chromosome ena exon 2177087 2178949 . + . Parent=transcript:Rv1925;Name=Rv1925-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1925-1;rank=1 Chromosome ena CDS 2177087 2178949 . + 0 ID=CDS:Rv1925;Parent=transcript:Rv1925;protein_id=Rv1925 ### -Chromosome ena gene 2178957 2179436 . - . ID=gene:Rv1926c;Name=mpt63;biotype=protein_coding;description=Immunogenic protein Mpt63 (antigen Mpt63/MPB63) (16 kDa immunoprotective extracellular protein);gene_id=Rv1926c;logic_name=ena +Chromosome ena gene 2178957 2179436 . - . ID=gene:Rv1926c;Name=mpt63;biotype=protein_coding;description=Immunogenic protein Mpt63 (antigen Mpt63/MPB63) (16 kDa immunoprotective extracellular protein);gene_id=Rv1926c;logic_name=ena Chromosome ena mRNA 2178957 2179436 . - . ID=transcript:Rv1926c;Parent=gene:Rv1926c;Name=mpt63-1;biotype=protein_coding;transcript_id=Rv1926c Chromosome ena exon 2178957 2179436 . - . Parent=transcript:Rv1926c;Name=Rv1926c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1926c-1;rank=1 Chromosome ena CDS 2178957 2179436 . - 0 ID=CDS:Rv1926c;Parent=transcript:Rv1926c;protein_id=Rv1926c ### -Chromosome ena gene 2179673 2180446 . + . ID=gene:Rv1927;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1927;logic_name=ena +Chromosome ena gene 2179673 2180446 . + . ID=gene:Rv1927;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1927;logic_name=ena Chromosome ena mRNA 2179673 2180446 . + . ID=transcript:Rv1927;Parent=gene:Rv1927;biotype=protein_coding;transcript_id=Rv1927 Chromosome ena exon 2179673 2180446 . + . Parent=transcript:Rv1927;Name=Rv1927-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1927-1;rank=1 Chromosome ena CDS 2179673 2180446 . + 0 ID=CDS:Rv1927;Parent=transcript:Rv1927;protein_id=Rv1927 ### -Chromosome ena gene 2180450 2181217 . - . ID=gene:Rv1928c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1928c;logic_name=ena +Chromosome ena gene 2180450 2181217 . - . ID=gene:Rv1928c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1928c;logic_name=ena Chromosome ena mRNA 2180450 2181217 . - . ID=transcript:Rv1928c;Parent=gene:Rv1928c;biotype=protein_coding;transcript_id=Rv1928c Chromosome ena exon 2180450 2181217 . - . Parent=transcript:Rv1928c;Name=Rv1928c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1928c-1;rank=1 Chromosome ena CDS 2180450 2181217 . - 0 ID=CDS:Rv1928c;Parent=transcript:Rv1928c;protein_id=Rv1928c ### -Chromosome ena gene 2181262 2181906 . - . ID=gene:Rv1929c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1929c;logic_name=ena +Chromosome ena gene 2181262 2181906 . - . ID=gene:Rv1929c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1929c;logic_name=ena Chromosome ena mRNA 2181262 2181906 . - . ID=transcript:Rv1929c;Parent=gene:Rv1929c;biotype=protein_coding;transcript_id=Rv1929c Chromosome ena exon 2181262 2181906 . - . Parent=transcript:Rv1929c;Name=Rv1929c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1929c-1;rank=1 Chromosome ena CDS 2181262 2181906 . - 0 ID=CDS:Rv1929c;Parent=transcript:Rv1929c;protein_id=Rv1929c ### -Chromosome ena gene 2181918 2182442 . - . ID=gene:Rv1930c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1930c;logic_name=ena +Chromosome ena gene 2181918 2182442 . - . ID=gene:Rv1930c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1930c;logic_name=ena Chromosome ena mRNA 2181918 2182442 . - . ID=transcript:Rv1930c;Parent=gene:Rv1930c;biotype=protein_coding;transcript_id=Rv1930c Chromosome ena exon 2181918 2182442 . - . Parent=transcript:Rv1930c;Name=Rv1930c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1930c-1;rank=1 Chromosome ena CDS 2181918 2182442 . - 0 ID=CDS:Rv1930c;Parent=transcript:Rv1930c;protein_id=Rv1930c ### -Chromosome ena gene 2182460 2183239 . - . ID=gene:Rv1931c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1931c;logic_name=ena +Chromosome ena gene 2182460 2183239 . - . ID=gene:Rv1931c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1931c;logic_name=ena Chromosome ena mRNA 2182460 2183239 . - . ID=transcript:Rv1931c;Parent=gene:Rv1931c;biotype=protein_coding;transcript_id=Rv1931c Chromosome ena exon 2182460 2183239 . - . Parent=transcript:Rv1931c;Name=Rv1931c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1931c-1;rank=1 Chromosome ena CDS 2182460 2183239 . - 0 ID=CDS:Rv1931c;Parent=transcript:Rv1931c;protein_id=Rv1931c ### -Chromosome ena gene 2183372 2183869 . + . ID=gene:Rv1932;Name=tpx;biotype=protein_coding;description=Probable thiol peroxidase Tpx;gene_id=Rv1932;logic_name=ena +Chromosome ena gene 2183372 2183869 . + . ID=gene:Rv1932;Name=tpx;biotype=protein_coding;description=Probable thiol peroxidase Tpx;gene_id=Rv1932;logic_name=ena Chromosome ena mRNA 2183372 2183869 . + . ID=transcript:Rv1932;Parent=gene:Rv1932;Name=tpx-1;biotype=protein_coding;transcript_id=Rv1932 Chromosome ena exon 2183372 2183869 . + . Parent=transcript:Rv1932;Name=Rv1932-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1932-1;rank=1 Chromosome ena CDS 2183372 2183869 . + 0 ID=CDS:Rv1932;Parent=transcript:Rv1932;protein_id=Rv1932 ### -Chromosome ena gene 2183866 2184957 . - . ID=gene:Rv1933c;Name=fadE18;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE18;gene_id=Rv1933c;logic_name=ena +Chromosome ena gene 2183866 2184957 . - . ID=gene:Rv1933c;Name=fadE18;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE18;gene_id=Rv1933c;logic_name=ena Chromosome ena mRNA 2183866 2184957 . - . ID=transcript:Rv1933c;Parent=gene:Rv1933c;Name=fadE18-1;biotype=protein_coding;transcript_id=Rv1933c Chromosome ena exon 2183866 2184957 . - . Parent=transcript:Rv1933c;Name=Rv1933c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1933c-1;rank=1 Chromosome ena CDS 2183866 2184957 . - 0 ID=CDS:Rv1933c;Parent=transcript:Rv1933c;protein_id=Rv1933c ### -Chromosome ena gene 2184959 2186188 . - . ID=gene:Rv1934c;Name=fadE17;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE17;gene_id=Rv1934c;logic_name=ena +Chromosome ena gene 2184959 2186188 . - . ID=gene:Rv1934c;Name=fadE17;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE17;gene_id=Rv1934c;logic_name=ena Chromosome ena mRNA 2184959 2186188 . - . ID=transcript:Rv1934c;Parent=gene:Rv1934c;Name=fadE17-1;biotype=protein_coding;transcript_id=Rv1934c Chromosome ena exon 2184959 2186188 . - . Parent=transcript:Rv1934c;Name=Rv1934c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1934c-1;rank=1 Chromosome ena CDS 2184959 2186188 . - 0 ID=CDS:Rv1934c;Parent=transcript:Rv1934c;protein_id=Rv1934c ### -Chromosome ena gene 2186203 2187159 . - . ID=gene:Rv1935c;Name=echA13;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA13 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1935c;logic_name=ena +Chromosome ena gene 2186203 2187159 . - . ID=gene:Rv1935c;Name=echA13;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA13 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv1935c;logic_name=ena Chromosome ena mRNA 2186203 2187159 . - . ID=transcript:Rv1935c;Parent=gene:Rv1935c;Name=echA13-1;biotype=protein_coding;transcript_id=Rv1935c Chromosome ena exon 2186203 2187159 . - . Parent=transcript:Rv1935c;Name=Rv1935c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1935c-1;rank=1 Chromosome ena CDS 2186203 2187159 . - 0 ID=CDS:Rv1935c;Parent=transcript:Rv1935c;protein_id=Rv1935c ### -Chromosome ena gene 2187384 2188493 . + . ID=gene:Rv1936;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv1936;logic_name=ena +Chromosome ena gene 2187384 2188493 . + . ID=gene:Rv1936;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv1936;logic_name=ena Chromosome ena mRNA 2187384 2188493 . + . ID=transcript:Rv1936;Parent=gene:Rv1936;biotype=protein_coding;transcript_id=Rv1936 Chromosome ena exon 2187384 2188493 . + . Parent=transcript:Rv1936;Name=Rv1936-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1936-1;rank=1 Chromosome ena CDS 2187384 2188493 . + 0 ID=CDS:Rv1936;Parent=transcript:Rv1936;protein_id=Rv1936 ### -Chromosome ena gene 2188496 2191015 . + . ID=gene:Rv1937;biotype=protein_coding;description=Possible oxygenase;gene_id=Rv1937;logic_name=ena +Chromosome ena gene 2188496 2191015 . + . ID=gene:Rv1937;biotype=protein_coding;description=Possible oxygenase;gene_id=Rv1937;logic_name=ena Chromosome ena mRNA 2188496 2191015 . + . ID=transcript:Rv1937;Parent=gene:Rv1937;biotype=protein_coding;transcript_id=Rv1937 Chromosome ena exon 2188496 2191015 . + . Parent=transcript:Rv1937;Name=Rv1937-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1937-1;rank=1 Chromosome ena CDS 2188496 2191015 . + 0 ID=CDS:Rv1937;Parent=transcript:Rv1937;protein_id=Rv1937 ### -Chromosome ena gene 2191027 2192097 . + . ID=gene:Rv1938;Name=ephB;biotype=protein_coding;description=Probable epoxide hydrolase EphB (epoxide hydratase);gene_id=Rv1938;logic_name=ena +Chromosome ena gene 2191027 2192097 . + . ID=gene:Rv1938;Name=ephB;biotype=protein_coding;description=Probable epoxide hydrolase EphB (epoxide hydratase);gene_id=Rv1938;logic_name=ena Chromosome ena mRNA 2191027 2192097 . + . ID=transcript:Rv1938;Parent=gene:Rv1938;Name=ephB-1;biotype=protein_coding;transcript_id=Rv1938 Chromosome ena exon 2191027 2192097 . + . Parent=transcript:Rv1938;Name=Rv1938-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1938-1;rank=1 Chromosome ena CDS 2191027 2192097 . + 0 ID=CDS:Rv1938;Parent=transcript:Rv1938;protein_id=Rv1938 ### -Chromosome ena gene 2192094 2192609 . + . ID=gene:Rv1939;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1939;logic_name=ena +Chromosome ena gene 2192094 2192609 . + . ID=gene:Rv1939;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv1939;logic_name=ena Chromosome ena mRNA 2192094 2192609 . + . ID=transcript:Rv1939;Parent=gene:Rv1939;biotype=protein_coding;transcript_id=Rv1939 Chromosome ena exon 2192094 2192609 . + . Parent=transcript:Rv1939;Name=Rv1939-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1939-1;rank=1 Chromosome ena CDS 2192094 2192609 . + 0 ID=CDS:Rv1939;Parent=transcript:Rv1939;protein_id=Rv1939 ### -Chromosome ena gene 2192606 2193667 . + . ID=gene:Rv1940;Name=ribA1;biotype=protein_coding;description=Probable riboflavin biosynthesis protein RibA1 (GTP cyclohydrolase II);gene_id=Rv1940;logic_name=ena +Chromosome ena gene 2192606 2193667 . + . ID=gene:Rv1940;Name=ribA1;biotype=protein_coding;description=Probable riboflavin biosynthesis protein RibA1 (GTP cyclohydrolase II);gene_id=Rv1940;logic_name=ena Chromosome ena mRNA 2192606 2193667 . + . ID=transcript:Rv1940;Parent=gene:Rv1940;Name=ribA1-1;biotype=protein_coding;transcript_id=Rv1940 Chromosome ena exon 2192606 2193667 . + . Parent=transcript:Rv1940;Name=Rv1940-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1940-1;rank=1 Chromosome ena CDS 2192606 2193667 . + 0 ID=CDS:Rv1940;Parent=transcript:Rv1940;protein_id=Rv1940 ### -Chromosome ena gene 2193664 2194434 . + . ID=gene:Rv1941;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1941;logic_name=ena +Chromosome ena gene 2193664 2194434 . + . ID=gene:Rv1941;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv1941;logic_name=ena Chromosome ena mRNA 2193664 2194434 . + . ID=transcript:Rv1941;Parent=gene:Rv1941;biotype=protein_coding;transcript_id=Rv1941 Chromosome ena exon 2193664 2194434 . + . Parent=transcript:Rv1941;Name=Rv1941-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1941-1;rank=1 Chromosome ena CDS 2193664 2194434 . + 0 ID=CDS:Rv1941;Parent=transcript:Rv1941;protein_id=Rv1941 ### -Chromosome ena gene 2194644 2194973 . - . ID=gene:Rv1942c;Name=mazF5;biotype=protein_coding;description=Possible toxin MazF5;gene_id=Rv1942c;logic_name=ena +Chromosome ena gene 2194644 2194973 . - . ID=gene:Rv1942c;Name=mazF5;biotype=protein_coding;description=Possible toxin MazF5;gene_id=Rv1942c;logic_name=ena Chromosome ena mRNA 2194644 2194973 . - . ID=transcript:Rv1942c;Parent=gene:Rv1942c;Name=mazF5-1;biotype=protein_coding;transcript_id=Rv1942c Chromosome ena exon 2194644 2194973 . - . Parent=transcript:Rv1942c;Name=Rv1942c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1942c-1;rank=1 Chromosome ena CDS 2194644 2194973 . - 0 ID=CDS:Rv1942c;Parent=transcript:Rv1942c;protein_id=Rv1942c ### -Chromosome ena gene 2194970 2195347 . - . ID=gene:Rv1943c;Name=mazE5;biotype=protein_coding;description=Possible antitoxin MazE5;gene_id=Rv1943c;logic_name=ena +Chromosome ena gene 2194970 2195347 . - . ID=gene:Rv1943c;Name=mazE5;biotype=protein_coding;description=Possible antitoxin MazE5;gene_id=Rv1943c;logic_name=ena Chromosome ena mRNA 2194970 2195347 . - . ID=transcript:Rv1943c;Parent=gene:Rv1943c;Name=mazE5-1;biotype=protein_coding;transcript_id=Rv1943c Chromosome ena exon 2194970 2195347 . - . Parent=transcript:Rv1943c;Name=Rv1943c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1943c-1;rank=1 Chromosome ena CDS 2194970 2195347 . - 0 ID=CDS:Rv1943c;Parent=transcript:Rv1943c;protein_id=Rv1943c ### -Chromosome ena gene 2195344 2195934 . - . ID=gene:Rv1944c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1944c;logic_name=ena +Chromosome ena gene 2195344 2195934 . - . ID=gene:Rv1944c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1944c;logic_name=ena Chromosome ena mRNA 2195344 2195934 . - . ID=transcript:Rv1944c;Parent=gene:Rv1944c;biotype=protein_coding;transcript_id=Rv1944c Chromosome ena exon 2195344 2195934 . - . Parent=transcript:Rv1944c;Name=Rv1944c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1944c-1;rank=1 Chromosome ena CDS 2195344 2195934 . - 0 ID=CDS:Rv1944c;Parent=transcript:Rv1944c;protein_id=Rv1944c ### -Chromosome ena gene 2195989 2197353 . + . ID=gene:Rv1945;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1945;logic_name=ena +Chromosome ena gene 2195989 2197353 . + . ID=gene:Rv1945;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1945;logic_name=ena Chromosome ena mRNA 2195989 2197353 . + . ID=transcript:Rv1945;Parent=gene:Rv1945;biotype=protein_coding;transcript_id=Rv1945 Chromosome ena exon 2195989 2197353 . + . Parent=transcript:Rv1945;Name=Rv1945-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1945-1;rank=1 Chromosome ena CDS 2195989 2197353 . + 0 ID=CDS:Rv1945;Parent=transcript:Rv1945;protein_id=Rv1945 ### -Chromosome ena gene 2197508 2197960 . - . ID=gene:Rv1946c;Name=lppG;biotype=protein_coding;description=Possible lipoprotein;gene_id=Rv1946c;logic_name=ena +Chromosome ena gene 2197508 2197960 . - . ID=gene:Rv1946c;Name=lppG;biotype=protein_coding;description=Possible lipoprotein;gene_id=Rv1946c;logic_name=ena Chromosome ena mRNA 2197508 2197960 . - . ID=transcript:Rv1946c;Parent=gene:Rv1946c;Name=lppG-1;biotype=protein_coding;transcript_id=Rv1946c Chromosome ena exon 2197508 2197960 . - . Parent=transcript:Rv1946c;Name=Rv1946c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1946c-1;rank=1 Chromosome ena CDS 2197508 2197960 . - 0 ID=CDS:Rv1946c;Parent=transcript:Rv1946c;protein_id=Rv1946c ### -Chromosome ena gene 2198024 2198425 . + . ID=gene:Rv1947;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1947;logic_name=ena +Chromosome ena gene 2198024 2198425 . + . ID=gene:Rv1947;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1947;logic_name=ena Chromosome ena mRNA 2198024 2198425 . + . ID=transcript:Rv1947;Parent=gene:Rv1947;biotype=protein_coding;transcript_id=Rv1947 Chromosome ena exon 2198024 2198425 . + . Parent=transcript:Rv1947;Name=Rv1947-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1947-1;rank=1 Chromosome ena CDS 2198024 2198425 . + 0 ID=CDS:Rv1947;Parent=transcript:Rv1947;protein_id=Rv1947 ### -Chromosome ena gene 2198714 2199064 . - . ID=gene:Rv1948c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1948c;logic_name=ena +Chromosome ena gene 2198714 2199064 . - . ID=gene:Rv1948c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1948c;logic_name=ena Chromosome ena mRNA 2198714 2199064 . - . ID=transcript:Rv1948c;Parent=gene:Rv1948c;biotype=protein_coding;transcript_id=Rv1948c Chromosome ena exon 2198714 2199064 . - . Parent=transcript:Rv1948c;Name=Rv1948c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1948c-1;rank=1 Chromosome ena CDS 2198714 2199064 . - 0 ID=CDS:Rv1948c;Parent=transcript:Rv1948c;protein_id=Rv1948c ### -Chromosome ena gene 2199075 2200034 . - . ID=gene:Rv1949c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1949c;logic_name=ena +Chromosome ena gene 2199075 2200034 . - . ID=gene:Rv1949c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1949c;logic_name=ena Chromosome ena mRNA 2199075 2200034 . - . ID=transcript:Rv1949c;Parent=gene:Rv1949c;biotype=protein_coding;transcript_id=Rv1949c Chromosome ena exon 2199075 2200034 . - . Parent=transcript:Rv1949c;Name=Rv1949c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1949c-1;rank=1 Chromosome ena CDS 2199075 2200034 . - 0 ID=CDS:Rv1949c;Parent=transcript:Rv1949c;protein_id=Rv1949c ### -Chromosome ena gene 2199998 2200189 . - . ID=gene:Rv1950c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1950c;logic_name=ena +Chromosome ena gene 2199998 2200189 . - . ID=gene:Rv1950c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1950c;logic_name=ena Chromosome ena mRNA 2199998 2200189 . - . ID=transcript:Rv1950c;Parent=gene:Rv1950c;biotype=protein_coding;transcript_id=Rv1950c Chromosome ena exon 2199998 2200189 . - . Parent=transcript:Rv1950c;Name=Rv1950c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1950c-1;rank=1 Chromosome ena CDS 2199998 2200189 . - 0 ID=CDS:Rv1950c;Parent=transcript:Rv1950c;protein_id=Rv1950c ### -Chromosome ena gene 2200190 2200486 . - . ID=gene:Rv1951c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1951c;logic_name=ena +Chromosome ena gene 2200190 2200486 . - . ID=gene:Rv1951c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1951c;logic_name=ena Chromosome ena mRNA 2200190 2200486 . - . ID=transcript:Rv1951c;Parent=gene:Rv1951c;biotype=protein_coding;transcript_id=Rv1951c Chromosome ena exon 2200190 2200486 . - . Parent=transcript:Rv1951c;Name=Rv1951c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1951c-1;rank=1 Chromosome ena CDS 2200190 2200486 . - 0 ID=CDS:Rv1951c;Parent=transcript:Rv1951c;protein_id=Rv1951c ### -Chromosome ena gene 2200726 2200941 . + . ID=gene:Rv1952;Name=vapB14;biotype=protein_coding;description=Possible antitoxin VapB14;gene_id=Rv1952;logic_name=ena +Chromosome ena gene 2200726 2200941 . + . ID=gene:Rv1952;Name=vapB14;biotype=protein_coding;description=Possible antitoxin VapB14;gene_id=Rv1952;logic_name=ena Chromosome ena mRNA 2200726 2200941 . + . ID=transcript:Rv1952;Parent=gene:Rv1952;Name=vapB14-1;biotype=protein_coding;transcript_id=Rv1952 Chromosome ena exon 2200726 2200941 . + . Parent=transcript:Rv1952;Name=Rv1952-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1952-1;rank=1 Chromosome ena CDS 2200726 2200941 . + 0 ID=CDS:Rv1952;Parent=transcript:Rv1952;protein_id=Rv1952 ### -Chromosome ena gene 2200938 2201249 . + . ID=gene:Rv1953;Name=vapC14;biotype=protein_coding;description=Possible toxin VapC14;gene_id=Rv1953;logic_name=ena +Chromosome ena gene 2200938 2201249 . + . ID=gene:Rv1953;Name=vapC14;biotype=protein_coding;description=Possible toxin VapC14;gene_id=Rv1953;logic_name=ena Chromosome ena mRNA 2200938 2201249 . + . ID=transcript:Rv1953;Parent=gene:Rv1953;Name=vapC14-1;biotype=protein_coding;transcript_id=Rv1953 Chromosome ena exon 2200938 2201249 . + . Parent=transcript:Rv1953;Name=Rv1953-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1953-1;rank=1 Chromosome ena CDS 2200938 2201249 . + 0 ID=CDS:Rv1953;Parent=transcript:Rv1953;protein_id=Rv1953 ### -Chromosome ena gene 2201223 2201744 . - . ID=gene:Rv1954c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1954c;logic_name=ena +Chromosome ena gene 2201223 2201744 . - . ID=gene:Rv1954c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1954c;logic_name=ena Chromosome ena mRNA 2201223 2201744 . - . ID=transcript:Rv1954c;Parent=gene:Rv1954c;biotype=protein_coding;transcript_id=Rv1954c Chromosome ena exon 2201223 2201744 . - . Parent=transcript:Rv1954c;Name=Rv1954c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1954c-1;rank=1 Chromosome ena CDS 2201223 2201744 . - 0 ID=CDS:Rv1954c;Parent=transcript:Rv1954c;protein_id=Rv1954c ### -Chromosome ena gene 2201277 2201579 . + . ID=gene:Rv1954A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1954A;logic_name=ena +Chromosome ena gene 2201277 2201579 . + . ID=gene:Rv1954A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1954A;logic_name=ena Chromosome ena mRNA 2201277 2201579 . + . ID=transcript:Rv1954A;Parent=gene:Rv1954A;biotype=protein_coding;transcript_id=Rv1954A Chromosome ena exon 2201277 2201579 . + . Parent=transcript:Rv1954A;Name=Rv1954A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1954A-1;rank=1 Chromosome ena CDS 2201277 2201579 . + 0 ID=CDS:Rv1954A;Parent=transcript:Rv1954A;protein_id=Rv1954A ### -Chromosome ena gene 2201719 2202096 . + . ID=gene:Rv1955;Name=higB;biotype=protein_coding;description=Possible toxin HigB;gene_id=Rv1955;logic_name=ena +Chromosome ena gene 2201719 2202096 . + . ID=gene:Rv1955;Name=higB;biotype=protein_coding;description=Possible toxin HigB;gene_id=Rv1955;logic_name=ena Chromosome ena mRNA 2201719 2202096 . + . ID=transcript:Rv1955;Parent=gene:Rv1955;Name=higB-1;biotype=protein_coding;transcript_id=Rv1955 Chromosome ena exon 2201719 2202096 . + . Parent=transcript:Rv1955;Name=Rv1955-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1955-1;rank=1 Chromosome ena CDS 2201719 2202096 . + 0 ID=CDS:Rv1955;Parent=transcript:Rv1955;protein_id=Rv1955 ### -Chromosome ena gene 2202138 2202587 . + . ID=gene:Rv1956;Name=higA;biotype=protein_coding;description=Possible antitoxin HigA;gene_id=Rv1956;logic_name=ena +Chromosome ena gene 2202138 2202587 . + . ID=gene:Rv1956;Name=higA;biotype=protein_coding;description=Possible antitoxin HigA;gene_id=Rv1956;logic_name=ena Chromosome ena mRNA 2202138 2202587 . + . ID=transcript:Rv1956;Parent=gene:Rv1956;Name=higA-1;biotype=protein_coding;transcript_id=Rv1956 Chromosome ena exon 2202138 2202587 . + . Parent=transcript:Rv1956;Name=Rv1956-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1956-1;rank=1 Chromosome ena CDS 2202138 2202587 . + 0 ID=CDS:Rv1956;Parent=transcript:Rv1956;protein_id=Rv1956 ### -Chromosome ena gene 2202584 2203129 . + . ID=gene:Rv1957;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1957;logic_name=ena +Chromosome ena gene 2202584 2203129 . + . ID=gene:Rv1957;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1957;logic_name=ena Chromosome ena mRNA 2202584 2203129 . + . ID=transcript:Rv1957;Parent=gene:Rv1957;biotype=protein_coding;transcript_id=Rv1957 Chromosome ena exon 2202584 2203129 . + . Parent=transcript:Rv1957;Name=Rv1957-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1957-1;rank=1 Chromosome ena CDS 2202584 2203129 . + 0 ID=CDS:Rv1957;Parent=transcript:Rv1957;protein_id=Rv1957 ### -Chromosome ena gene 2203018 2203632 . - . ID=gene:Rv1958c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1958c;logic_name=ena +Chromosome ena gene 2203018 2203632 . - . ID=gene:Rv1958c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1958c;logic_name=ena Chromosome ena mRNA 2203018 2203632 . - . ID=transcript:Rv1958c;Parent=gene:Rv1958c;biotype=protein_coding;transcript_id=Rv1958c Chromosome ena exon 2203018 2203632 . - . Parent=transcript:Rv1958c;Name=Rv1958c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1958c-1;rank=1 Chromosome ena CDS 2203018 2203632 . - 0 ID=CDS:Rv1958c;Parent=transcript:Rv1958c;protein_id=Rv1958c ### -Chromosome ena gene 2203681 2203977 . - . ID=gene:Rv1959c;Name=parE1;biotype=protein_coding;description=Possible toxin ParE1;gene_id=Rv1959c;logic_name=ena +Chromosome ena gene 2203681 2203977 . - . ID=gene:Rv1959c;Name=parE1;biotype=protein_coding;description=Possible toxin ParE1;gene_id=Rv1959c;logic_name=ena Chromosome ena mRNA 2203681 2203977 . - . ID=transcript:Rv1959c;Parent=gene:Rv1959c;Name=parE1-1;biotype=protein_coding;transcript_id=Rv1959c Chromosome ena exon 2203681 2203977 . - . Parent=transcript:Rv1959c;Name=Rv1959c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1959c-1;rank=1 Chromosome ena CDS 2203681 2203977 . - 0 ID=CDS:Rv1959c;Parent=transcript:Rv1959c;protein_id=Rv1959c ### -Chromosome ena gene 2203974 2204225 . - . ID=gene:Rv1960c;Name=parD1;biotype=protein_coding;description=Possible antitoxin ParD1;gene_id=Rv1960c;logic_name=ena +Chromosome ena gene 2203974 2204225 . - . ID=gene:Rv1960c;Name=parD1;biotype=protein_coding;description=Possible antitoxin ParD1;gene_id=Rv1960c;logic_name=ena Chromosome ena mRNA 2203974 2204225 . - . ID=transcript:Rv1960c;Parent=gene:Rv1960c;Name=parD1-1;biotype=protein_coding;transcript_id=Rv1960c Chromosome ena exon 2203974 2204225 . - . Parent=transcript:Rv1960c;Name=Rv1960c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1960c-1;rank=1 Chromosome ena CDS 2203974 2204225 . - 0 ID=CDS:Rv1960c;Parent=transcript:Rv1960c;protein_id=Rv1960c ### -Chromosome ena gene 2204212 2204706 . + . ID=gene:Rv1961;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1961;logic_name=ena +Chromosome ena gene 2204212 2204706 . + . ID=gene:Rv1961;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1961;logic_name=ena Chromosome ena mRNA 2204212 2204706 . + . ID=transcript:Rv1961;Parent=gene:Rv1961;biotype=protein_coding;transcript_id=Rv1961 Chromosome ena exon 2204212 2204706 . + . Parent=transcript:Rv1961;Name=Rv1961-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1961-1;rank=1 Chromosome ena CDS 2204212 2204706 . + 0 ID=CDS:Rv1961;Parent=transcript:Rv1961;protein_id=Rv1961 ### -Chromosome ena gene 2204866 2205273 . - . ID=gene:Rv1962c;Name=vapC35;biotype=protein_coding;description=Possible toxin VapC35. Contains PIN domain.;gene_id=Rv1962c;logic_name=ena +Chromosome ena gene 2204866 2205273 . - . ID=gene:Rv1962c;Name=vapC35;biotype=protein_coding;description=Possible toxin VapC35. Contains PIN domain.;gene_id=Rv1962c;logic_name=ena Chromosome ena mRNA 2204866 2205273 . - . ID=transcript:Rv1962c;Parent=gene:Rv1962c;Name=vapC35-1;biotype=protein_coding;transcript_id=Rv1962c Chromosome ena exon 2204866 2205273 . - . Parent=transcript:Rv1962c;Name=Rv1962c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1962c-1;rank=1 Chromosome ena CDS 2204866 2205273 . - 0 ID=CDS:Rv1962c;Parent=transcript:Rv1962c;protein_id=Rv1962c ### -Chromosome ena gene 2205277 2205549 . - . ID=gene:Rv1962A;Name=vapB35;biotype=protein_coding;description=Possible antitoxin VapB35;gene_id=Rv1962A;logic_name=ena +Chromosome ena gene 2205277 2205549 . - . ID=gene:Rv1962A;Name=vapB35;biotype=protein_coding;description=Possible antitoxin VapB35;gene_id=Rv1962A;logic_name=ena Chromosome ena mRNA 2205277 2205549 . - . ID=transcript:Rv1962A;Parent=gene:Rv1962A;Name=vapB35-1;biotype=protein_coding;transcript_id=Rv1962A Chromosome ena exon 2205277 2205549 . - . Parent=transcript:Rv1962A;Name=Rv1962A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1962A-1;rank=1 Chromosome ena CDS 2205277 2205549 . - 0 ID=CDS:Rv1962A;Parent=transcript:Rv1962A;protein_id=Rv1962A ### -Chromosome ena gene 2205582 2206802 . - . ID=gene:Rv1963c;Name=mce3R;biotype=protein_coding;description=Probable transcriptional repressor (probably TetR-family) Mce3R;gene_id=Rv1963c;logic_name=ena +Chromosome ena gene 2205582 2206802 . - . ID=gene:Rv1963c;Name=mce3R;biotype=protein_coding;description=Probable transcriptional repressor (probably TetR-family) Mce3R;gene_id=Rv1963c;logic_name=ena Chromosome ena mRNA 2205582 2206802 . - . ID=transcript:Rv1963c;Parent=gene:Rv1963c;Name=mce3R-1;biotype=protein_coding;transcript_id=Rv1963c Chromosome ena exon 2205582 2206802 . - . Parent=transcript:Rv1963c;Name=Rv1963c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1963c-1;rank=1 Chromosome ena CDS 2205582 2206802 . - 0 ID=CDS:Rv1963c;Parent=transcript:Rv1963c;protein_id=Rv1963c ### -Chromosome ena gene 2207700 2208497 . + . ID=gene:Rv1964;Name=yrbE3A;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE3A;gene_id=Rv1964;logic_name=ena +Chromosome ena gene 2207700 2208497 . + . ID=gene:Rv1964;Name=yrbE3A;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE3A;gene_id=Rv1964;logic_name=ena Chromosome ena mRNA 2207700 2208497 . + . ID=transcript:Rv1964;Parent=gene:Rv1964;Name=yrbE3A-1;biotype=protein_coding;transcript_id=Rv1964 Chromosome ena exon 2207700 2208497 . + . Parent=transcript:Rv1964;Name=Rv1964-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1964-1;rank=1 Chromosome ena CDS 2207700 2208497 . + 0 ID=CDS:Rv1964;Parent=transcript:Rv1964;protein_id=Rv1964 ### -Chromosome ena gene 2208507 2209322 . + . ID=gene:Rv1965;Name=yrbE3B;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE3B;gene_id=Rv1965;logic_name=ena +Chromosome ena gene 2208507 2209322 . + . ID=gene:Rv1965;Name=yrbE3B;biotype=protein_coding;description=Conserved hypothetical integral membrane protein YrbE3B;gene_id=Rv1965;logic_name=ena Chromosome ena mRNA 2208507 2209322 . + . ID=transcript:Rv1965;Parent=gene:Rv1965;Name=yrbE3B-1;biotype=protein_coding;transcript_id=Rv1965 Chromosome ena exon 2208507 2209322 . + . Parent=transcript:Rv1965;Name=Rv1965-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1965-1;rank=1 Chromosome ena CDS 2208507 2209322 . + 0 ID=CDS:Rv1965;Parent=transcript:Rv1965;protein_id=Rv1965 ### -Chromosome ena gene 2209327 2210604 . + . ID=gene:Rv1966;Name=mce3A;biotype=protein_coding;description=Mce-family protein Mce3A;gene_id=Rv1966;logic_name=ena +Chromosome ena gene 2209327 2210604 . + . ID=gene:Rv1966;Name=mce3A;biotype=protein_coding;description=Mce-family protein Mce3A;gene_id=Rv1966;logic_name=ena Chromosome ena mRNA 2209327 2210604 . + . ID=transcript:Rv1966;Parent=gene:Rv1966;Name=mce3A-1;biotype=protein_coding;transcript_id=Rv1966 Chromosome ena exon 2209327 2210604 . + . Parent=transcript:Rv1966;Name=Rv1966-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1966-1;rank=1 Chromosome ena CDS 2209327 2210604 . + 0 ID=CDS:Rv1966;Parent=transcript:Rv1966;protein_id=Rv1966 ### -Chromosome ena gene 2210601 2211629 . + . ID=gene:Rv1967;Name=mce3B;biotype=protein_coding;description=Mce-family protein Mce3B;gene_id=Rv1967;logic_name=ena +Chromosome ena gene 2210601 2211629 . + . ID=gene:Rv1967;Name=mce3B;biotype=protein_coding;description=Mce-family protein Mce3B;gene_id=Rv1967;logic_name=ena Chromosome ena mRNA 2210601 2211629 . + . ID=transcript:Rv1967;Parent=gene:Rv1967;Name=mce3B-1;biotype=protein_coding;transcript_id=Rv1967 Chromosome ena exon 2210601 2211629 . + . Parent=transcript:Rv1967;Name=Rv1967-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1967-1;rank=1 Chromosome ena CDS 2210601 2211629 . + 0 ID=CDS:Rv1967;Parent=transcript:Rv1967;protein_id=Rv1967 ### -Chromosome ena gene 2211626 2212858 . + . ID=gene:Rv1968;Name=mce3C;biotype=protein_coding;description=Mce-family protein Mce3C;gene_id=Rv1968;logic_name=ena +Chromosome ena gene 2211626 2212858 . + . ID=gene:Rv1968;Name=mce3C;biotype=protein_coding;description=Mce-family protein Mce3C;gene_id=Rv1968;logic_name=ena Chromosome ena mRNA 2211626 2212858 . + . ID=transcript:Rv1968;Parent=gene:Rv1968;Name=mce3C-1;biotype=protein_coding;transcript_id=Rv1968 Chromosome ena exon 2211626 2212858 . + . Parent=transcript:Rv1968;Name=Rv1968-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1968-1;rank=1 Chromosome ena CDS 2211626 2212858 . + 0 ID=CDS:Rv1968;Parent=transcript:Rv1968;protein_id=Rv1968 ### -Chromosome ena gene 2212855 2214126 . + . ID=gene:Rv1969;Name=mce3D;biotype=protein_coding;description=Mce-family protein Mce3D;gene_id=Rv1969;logic_name=ena +Chromosome ena gene 2212855 2214126 . + . ID=gene:Rv1969;Name=mce3D;biotype=protein_coding;description=Mce-family protein Mce3D;gene_id=Rv1969;logic_name=ena Chromosome ena mRNA 2212855 2214126 . + . ID=transcript:Rv1969;Parent=gene:Rv1969;Name=mce3D-1;biotype=protein_coding;transcript_id=Rv1969 Chromosome ena exon 2212855 2214126 . + . Parent=transcript:Rv1969;Name=Rv1969-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1969-1;rank=1 Chromosome ena CDS 2212855 2214126 . + 0 ID=CDS:Rv1969;Parent=transcript:Rv1969;protein_id=Rv1969 ### -Chromosome ena gene 2214123 2215256 . + . ID=gene:Rv1970;Name=lprM;biotype=protein_coding;description=Possible Mce-family lipoprotein LprM (Mce-family lipoprotein Mce3E);gene_id=Rv1970;logic_name=ena +Chromosome ena gene 2214123 2215256 . + . ID=gene:Rv1970;Name=lprM;biotype=protein_coding;description=Possible Mce-family lipoprotein LprM (Mce-family lipoprotein Mce3E);gene_id=Rv1970;logic_name=ena Chromosome ena mRNA 2214123 2215256 . + . ID=transcript:Rv1970;Parent=gene:Rv1970;Name=lprM-1;biotype=protein_coding;transcript_id=Rv1970 Chromosome ena exon 2214123 2215256 . + . Parent=transcript:Rv1970;Name=Rv1970-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1970-1;rank=1 Chromosome ena CDS 2214123 2215256 . + 0 ID=CDS:Rv1970;Parent=transcript:Rv1970;protein_id=Rv1970 ### -Chromosome ena gene 2215257 2216570 . + . ID=gene:Rv1971;Name=mce3F;biotype=protein_coding;description=Mce-family protein Mce3F;gene_id=Rv1971;logic_name=ena +Chromosome ena gene 2215257 2216570 . + . ID=gene:Rv1971;Name=mce3F;biotype=protein_coding;description=Mce-family protein Mce3F;gene_id=Rv1971;logic_name=ena Chromosome ena mRNA 2215257 2216570 . + . ID=transcript:Rv1971;Parent=gene:Rv1971;Name=mce3F-1;biotype=protein_coding;transcript_id=Rv1971 Chromosome ena exon 2215257 2216570 . + . Parent=transcript:Rv1971;Name=Rv1971-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1971-1;rank=1 Chromosome ena CDS 2215257 2216570 . + 0 ID=CDS:Rv1971;Parent=transcript:Rv1971;protein_id=Rv1971 ### -Chromosome ena gene 2216592 2217167 . + . ID=gene:Rv1972;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv1972;logic_name=ena +Chromosome ena gene 2216592 2217167 . + . ID=gene:Rv1972;biotype=protein_coding;description=Probable conserved Mce associated membrane protein;gene_id=Rv1972;logic_name=ena Chromosome ena mRNA 2216592 2217167 . + . ID=transcript:Rv1972;Parent=gene:Rv1972;biotype=protein_coding;transcript_id=Rv1972 Chromosome ena exon 2216592 2217167 . + . Parent=transcript:Rv1972;Name=Rv1972-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1972-1;rank=1 Chromosome ena CDS 2216592 2217167 . + 0 ID=CDS:Rv1972;Parent=transcript:Rv1972;protein_id=Rv1972 ### -Chromosome ena gene 2217164 2217646 . + . ID=gene:Rv1973;biotype=protein_coding;description=Possible conserved Mce associated membrane protein;gene_id=Rv1973;logic_name=ena +Chromosome ena gene 2217164 2217646 . + . ID=gene:Rv1973;biotype=protein_coding;description=Possible conserved Mce associated membrane protein;gene_id=Rv1973;logic_name=ena Chromosome ena mRNA 2217164 2217646 . + . ID=transcript:Rv1973;Parent=gene:Rv1973;biotype=protein_coding;transcript_id=Rv1973 Chromosome ena exon 2217164 2217646 . + . Parent=transcript:Rv1973;Name=Rv1973-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1973-1;rank=1 Chromosome ena CDS 2217164 2217646 . + 0 ID=CDS:Rv1973;Parent=transcript:Rv1973;protein_id=Rv1973 ### -Chromosome ena gene 2217659 2218036 . + . ID=gene:Rv1974;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1974;logic_name=ena +Chromosome ena gene 2217659 2218036 . + . ID=gene:Rv1974;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv1974;logic_name=ena Chromosome ena mRNA 2217659 2218036 . + . ID=transcript:Rv1974;Parent=gene:Rv1974;biotype=protein_coding;transcript_id=Rv1974 Chromosome ena exon 2217659 2218036 . + . Parent=transcript:Rv1974;Name=Rv1974-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1974-1;rank=1 Chromosome ena CDS 2217659 2218036 . + 0 ID=CDS:Rv1974;Parent=transcript:Rv1974;protein_id=Rv1974 ### -Chromosome ena gene 2218052 2218717 . + . ID=gene:Rv1975;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1975;logic_name=ena +Chromosome ena gene 2218052 2218717 . + . ID=gene:Rv1975;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1975;logic_name=ena Chromosome ena mRNA 2218052 2218717 . + . ID=transcript:Rv1975;Parent=gene:Rv1975;biotype=protein_coding;transcript_id=Rv1975 Chromosome ena exon 2218052 2218717 . + . Parent=transcript:Rv1975;Name=Rv1975-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1975-1;rank=1 Chromosome ena CDS 2218052 2218717 . + 0 ID=CDS:Rv1975;Parent=transcript:Rv1975;protein_id=Rv1975 ### -Chromosome ena gene 2218844 2219251 . - . ID=gene:Rv1976c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1976c;logic_name=ena +Chromosome ena gene 2218844 2219251 . - . ID=gene:Rv1976c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv1976c;logic_name=ena Chromosome ena mRNA 2218844 2219251 . - . ID=transcript:Rv1976c;Parent=gene:Rv1976c;biotype=protein_coding;transcript_id=Rv1976c Chromosome ena exon 2218844 2219251 . - . Parent=transcript:Rv1976c;Name=Rv1976c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1976c-1;rank=1 Chromosome ena CDS 2218844 2219251 . - 0 ID=CDS:Rv1976c;Parent=transcript:Rv1976c;protein_id=Rv1976c ### -Chromosome ena gene 2219754 2220800 . + . ID=gene:Rv1977;biotype=protein_coding;description=Conserved protein;gene_id=Rv1977;logic_name=ena +Chromosome ena gene 2219754 2220800 . + . ID=gene:Rv1977;biotype=protein_coding;description=Conserved protein;gene_id=Rv1977;logic_name=ena Chromosome ena mRNA 2219754 2220800 . + . ID=transcript:Rv1977;Parent=gene:Rv1977;biotype=protein_coding;transcript_id=Rv1977 Chromosome ena exon 2219754 2220800 . + . Parent=transcript:Rv1977;Name=Rv1977-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1977-1;rank=1 Chromosome ena CDS 2219754 2220800 . + 0 ID=CDS:Rv1977;Parent=transcript:Rv1977;protein_id=Rv1977 ### -Chromosome ena gene 2220908 2221756 . + . ID=gene:Rv1978;biotype=protein_coding;description=Conserved protein;gene_id=Rv1978;logic_name=ena +Chromosome ena gene 2220908 2221756 . + . ID=gene:Rv1978;biotype=protein_coding;description=Conserved protein;gene_id=Rv1978;logic_name=ena Chromosome ena mRNA 2220908 2221756 . + . ID=transcript:Rv1978;Parent=gene:Rv1978;biotype=protein_coding;transcript_id=Rv1978 Chromosome ena exon 2220908 2221756 . + . Parent=transcript:Rv1978;Name=Rv1978-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1978-1;rank=1 Chromosome ena CDS 2220908 2221756 . + 0 ID=CDS:Rv1978;Parent=transcript:Rv1978;protein_id=Rv1978 ### -Chromosome ena gene 2221719 2223164 . - . ID=gene:Rv1979c;biotype=protein_coding;description=Possible conserved permease;gene_id=Rv1979c;logic_name=ena +Chromosome ena gene 2221719 2223164 . - . ID=gene:Rv1979c;biotype=protein_coding;description=Possible conserved permease;gene_id=Rv1979c;logic_name=ena Chromosome ena mRNA 2221719 2223164 . - . ID=transcript:Rv1979c;Parent=gene:Rv1979c;biotype=protein_coding;transcript_id=Rv1979c Chromosome ena exon 2221719 2223164 . - . Parent=transcript:Rv1979c;Name=Rv1979c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1979c-1;rank=1 Chromosome ena CDS 2221719 2223164 . - 0 ID=CDS:Rv1979c;Parent=transcript:Rv1979c;protein_id=Rv1979c ### -Chromosome ena gene 2223343 2224029 . - . ID=gene:Rv1980c;Name=mpt64;biotype=protein_coding;description=Immunogenic protein Mpt64 (antigen Mpt64/MPB64);gene_id=Rv1980c;logic_name=ena +Chromosome ena gene 2223343 2224029 . - . ID=gene:Rv1980c;Name=mpt64;biotype=protein_coding;description=Immunogenic protein Mpt64 (antigen Mpt64/MPB64);gene_id=Rv1980c;logic_name=ena Chromosome ena mRNA 2223343 2224029 . - . ID=transcript:Rv1980c;Parent=gene:Rv1980c;Name=mpt64-1;biotype=protein_coding;transcript_id=Rv1980c Chromosome ena exon 2223343 2224029 . - . Parent=transcript:Rv1980c;Name=Rv1980c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1980c-1;rank=1 Chromosome ena CDS 2223343 2224029 . - 0 ID=CDS:Rv1980c;Parent=transcript:Rv1980c;protein_id=Rv1980c ### -Chromosome ena gene 2224220 2225188 . - . ID=gene:Rv1981c;Name=nrdF1;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdF1 (ribonucleotide reductase small subunit) (R2F protein);gene_id=Rv1981c;logic_name=ena +Chromosome ena gene 2224220 2225188 . - . ID=gene:Rv1981c;Name=nrdF1;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdF1 (ribonucleotide reductase small subunit) (R2F protein);gene_id=Rv1981c;logic_name=ena Chromosome ena mRNA 2224220 2225188 . - . ID=transcript:Rv1981c;Parent=gene:Rv1981c;Name=nrdF1-1;biotype=protein_coding;transcript_id=Rv1981c Chromosome ena exon 2224220 2225188 . - . Parent=transcript:Rv1981c;Name=Rv1981c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1981c-1;rank=1 Chromosome ena CDS 2224220 2225188 . - 0 ID=CDS:Rv1981c;Parent=transcript:Rv1981c;protein_id=Rv1981c ### -Chromosome ena gene 2225413 2225832 . - . ID=gene:Rv1982c;Name=vapC36;biotype=protein_coding;description=Possible toxin VapC36. Contains PIN domain.;gene_id=Rv1982c;logic_name=ena +Chromosome ena gene 2225413 2225832 . - . ID=gene:Rv1982c;Name=vapC36;biotype=protein_coding;description=Possible toxin VapC36. Contains PIN domain.;gene_id=Rv1982c;logic_name=ena Chromosome ena mRNA 2225413 2225832 . - . ID=transcript:Rv1982c;Parent=gene:Rv1982c;Name=vapC36-1;biotype=protein_coding;transcript_id=Rv1982c Chromosome ena exon 2225413 2225832 . - . Parent=transcript:Rv1982c;Name=Rv1982c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1982c-1;rank=1 Chromosome ena CDS 2225413 2225832 . - 0 ID=CDS:Rv1982c;Parent=transcript:Rv1982c;protein_id=Rv1982c ### -Chromosome ena gene 2225841 2226101 . - . ID=gene:Rv1982A;Name=vapB36;biotype=protein_coding;description=Possible antitoxin VapB36;gene_id=Rv1982A;logic_name=ena +Chromosome ena gene 2225841 2226101 . - . ID=gene:Rv1982A;Name=vapB36;biotype=protein_coding;description=Possible antitoxin VapB36;gene_id=Rv1982A;logic_name=ena Chromosome ena mRNA 2225841 2226101 . - . ID=transcript:Rv1982A;Parent=gene:Rv1982A;Name=vapB36-1;biotype=protein_coding;transcript_id=Rv1982A Chromosome ena exon 2225841 2226101 . - . Parent=transcript:Rv1982A;Name=Rv1982A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1982A-1;rank=1 Chromosome ena CDS 2225841 2226101 . - 0 ID=CDS:Rv1982A;Parent=transcript:Rv1982A;protein_id=Rv1982A ### -Chromosome ena gene 2226244 2227920 . + . ID=gene:Rv1983;Name=PE_PGRS35;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS35;gene_id=Rv1983;logic_name=ena +Chromosome ena gene 2226244 2227920 . + . ID=gene:Rv1983;Name=PE_PGRS35;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS35;gene_id=Rv1983;logic_name=ena Chromosome ena mRNA 2226244 2227920 . + . ID=transcript:Rv1983;Parent=gene:Rv1983;Name=PE_PGRS35-1;biotype=protein_coding;transcript_id=Rv1983 Chromosome ena exon 2226244 2227920 . + . Parent=transcript:Rv1983;Name=Rv1983-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1983-1;rank=1 Chromosome ena CDS 2226244 2227920 . + 0 ID=CDS:Rv1983;Parent=transcript:Rv1983;protein_id=Rv1983 ### -Chromosome ena gene 2227908 2228561 . - . ID=gene:Rv1984c;Name=cfp21;biotype=protein_coding;description=Probable cutinase precursor CFP21;gene_id=Rv1984c;logic_name=ena +Chromosome ena gene 2227908 2228561 . - . ID=gene:Rv1984c;Name=cfp21;biotype=protein_coding;description=Probable cutinase precursor CFP21;gene_id=Rv1984c;logic_name=ena Chromosome ena mRNA 2227908 2228561 . - . ID=transcript:Rv1984c;Parent=gene:Rv1984c;Name=cfp21-1;biotype=protein_coding;transcript_id=Rv1984c Chromosome ena exon 2227908 2228561 . - . Parent=transcript:Rv1984c;Name=Rv1984c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1984c-1;rank=1 Chromosome ena CDS 2227908 2228561 . - 0 ID=CDS:Rv1984c;Parent=transcript:Rv1984c;protein_id=Rv1984c ### -Chromosome ena gene 2228991 2229902 . - . ID=gene:Rv1985c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LysR-family);gene_id=Rv1985c;logic_name=ena +Chromosome ena gene 2228991 2229902 . - . ID=gene:Rv1985c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably LysR-family);gene_id=Rv1985c;logic_name=ena Chromosome ena mRNA 2228991 2229902 . - . ID=transcript:Rv1985c;Parent=gene:Rv1985c;biotype=protein_coding;transcript_id=Rv1985c Chromosome ena exon 2228991 2229902 . - . Parent=transcript:Rv1985c;Name=Rv1985c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1985c-1;rank=1 Chromosome ena CDS 2228991 2229902 . - 0 ID=CDS:Rv1985c;Parent=transcript:Rv1985c;protein_id=Rv1985c ### -Chromosome ena gene 2230011 2230610 . + . ID=gene:Rv1986;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1986;logic_name=ena +Chromosome ena gene 2230011 2230610 . + . ID=gene:Rv1986;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1986;logic_name=ena Chromosome ena mRNA 2230011 2230610 . + . ID=transcript:Rv1986;Parent=gene:Rv1986;biotype=protein_coding;transcript_id=Rv1986 Chromosome ena exon 2230011 2230610 . + . Parent=transcript:Rv1986;Name=Rv1986-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1986-1;rank=1 Chromosome ena CDS 2230011 2230610 . + 0 ID=CDS:Rv1986;Parent=transcript:Rv1986;protein_id=Rv1986 ### -Chromosome ena gene 2231026 2231454 . + . ID=gene:Rv1987;biotype=protein_coding;description=Possible chitinase;gene_id=Rv1987;logic_name=ena +Chromosome ena gene 2231026 2231454 . + . ID=gene:Rv1987;biotype=protein_coding;description=Possible chitinase;gene_id=Rv1987;logic_name=ena Chromosome ena mRNA 2231026 2231454 . + . ID=transcript:Rv1987;Parent=gene:Rv1987;biotype=protein_coding;transcript_id=Rv1987 Chromosome ena exon 2231026 2231454 . + . Parent=transcript:Rv1987;Name=Rv1987-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1987-1;rank=1 Chromosome ena CDS 2231026 2231454 . + 0 ID=CDS:Rv1987;Parent=transcript:Rv1987;protein_id=Rv1987 ### -Chromosome ena gene 2231680 2232219 . + . ID=gene:Rv1988;Name=erm(37);biotype=protein_coding;description=Probable 23S rRNA methyltransferase Erm(37);gene_id=Rv1988;logic_name=ena +Chromosome ena gene 2231680 2232219 . + . ID=gene:Rv1988;Name=erm(37);biotype=protein_coding;description=Probable 23S rRNA methyltransferase Erm(37);gene_id=Rv1988;logic_name=ena Chromosome ena mRNA 2231680 2232219 . + . ID=transcript:Rv1988;Parent=gene:Rv1988;Name=erm(37)-1;biotype=protein_coding;transcript_id=Rv1988 Chromosome ena exon 2231680 2232219 . + . Parent=transcript:Rv1988;Name=Rv1988-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1988-1;rank=1 Chromosome ena CDS 2231680 2232219 . + 0 ID=CDS:Rv1988;Parent=transcript:Rv1988;protein_id=Rv1988 ### -Chromosome ena gene 2232739 2233299 . - . ID=gene:Rv1989c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1989c;logic_name=ena +Chromosome ena gene 2232739 2233299 . - . ID=gene:Rv1989c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv1989c;logic_name=ena Chromosome ena mRNA 2232739 2233299 . - . ID=transcript:Rv1989c;Parent=gene:Rv1989c;biotype=protein_coding;transcript_id=Rv1989c Chromosome ena exon 2232739 2233299 . - . Parent=transcript:Rv1989c;Name=Rv1989c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1989c-1;rank=1 Chromosome ena CDS 2232739 2233299 . - 0 ID=CDS:Rv1989c;Parent=transcript:Rv1989c;protein_id=Rv1989c ### -Chromosome ena gene 2233296 2233637 . - . ID=gene:Rv1990c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1990c;logic_name=ena +Chromosome ena gene 2233296 2233637 . - . ID=gene:Rv1990c;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv1990c;logic_name=ena Chromosome ena mRNA 2233296 2233637 . - . ID=transcript:Rv1990c;Parent=gene:Rv1990c;biotype=protein_coding;transcript_id=Rv1990c Chromosome ena exon 2233296 2233637 . - . Parent=transcript:Rv1990c;Name=Rv1990c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1990c-1;rank=1 Chromosome ena CDS 2233296 2233637 . - 0 ID=CDS:Rv1990c;Parent=transcript:Rv1990c;protein_id=Rv1990c ### -Chromosome ena gene 2233881 2234216 . - . ID=gene:Rv1990A;biotype=protein_coding;description=Possible dehydrogenase (fragment);gene_id=Rv1990A;logic_name=ena +Chromosome ena gene 2233881 2234216 . - . ID=gene:Rv1990A;biotype=protein_coding;description=Possible dehydrogenase (fragment);gene_id=Rv1990A;logic_name=ena Chromosome ena mRNA 2233881 2234216 . - . ID=transcript:Rv1990A;Parent=gene:Rv1990A;biotype=protein_coding;transcript_id=Rv1990A Chromosome ena exon 2233881 2234216 . - . Parent=transcript:Rv1990A;Name=Rv1990A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1990A-1;rank=1 Chromosome ena CDS 2233881 2234216 . - 0 ID=CDS:Rv1990A;Parent=transcript:Rv1990A;protein_id=Rv1990A ### -Chromosome ena gene 2234305 2234649 . - . ID=gene:Rv1991c;Name=mazF6;biotype=protein_coding;description=Toxin MazF6;gene_id=Rv1991c;logic_name=ena +Chromosome ena gene 2234305 2234649 . - . ID=gene:Rv1991c;Name=mazF6;biotype=protein_coding;description=Toxin MazF6;gene_id=Rv1991c;logic_name=ena Chromosome ena mRNA 2234305 2234649 . - . ID=transcript:Rv1991c;Parent=gene:Rv1991c;Name=mazF6-1;biotype=protein_coding;transcript_id=Rv1991c Chromosome ena exon 2234305 2234649 . - . Parent=transcript:Rv1991c;Name=Rv1991c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1991c-1;rank=1 Chromosome ena CDS 2234305 2234649 . - 0 ID=CDS:Rv1991c;Parent=transcript:Rv1991c;protein_id=Rv1991c ### -Chromosome ena gene 2234643 2234891 . - . ID=gene:Rv1991A;Name=mazE6;biotype=protein_coding;description=Antitoxin MazE6;gene_id=Rv1991A;logic_name=ena +Chromosome ena gene 2234643 2234891 . - . ID=gene:Rv1991A;Name=mazE6;biotype=protein_coding;description=Antitoxin MazE6;gene_id=Rv1991A;logic_name=ena Chromosome ena mRNA 2234643 2234891 . - . ID=transcript:Rv1991A;Parent=gene:Rv1991A;Name=mazE6-1;biotype=protein_coding;transcript_id=Rv1991A Chromosome ena exon 2234643 2234891 . - . Parent=transcript:Rv1991A;Name=Rv1991A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1991A-1;rank=1 Chromosome ena CDS 2234643 2234891 . - 0 ID=CDS:Rv1991A;Parent=transcript:Rv1991A;protein_id=Rv1991A ### -Chromosome ena gene 2234991 2237306 . - . ID=gene:Rv1992c;Name=ctpG;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase G CtpG;gene_id=Rv1992c;logic_name=ena +Chromosome ena gene 2234991 2237306 . - . ID=gene:Rv1992c;Name=ctpG;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase G CtpG;gene_id=Rv1992c;logic_name=ena Chromosome ena mRNA 2234991 2237306 . - . ID=transcript:Rv1992c;Parent=gene:Rv1992c;Name=ctpG-1;biotype=protein_coding;transcript_id=Rv1992c Chromosome ena exon 2234991 2237306 . - . Parent=transcript:Rv1992c;Name=Rv1992c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1992c-1;rank=1 Chromosome ena CDS 2234991 2237306 . - 0 ID=CDS:Rv1992c;Parent=transcript:Rv1992c;protein_id=Rv1992c ### -Chromosome ena gene 2237303 2237575 . - . ID=gene:Rv1993c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1993c;logic_name=ena +Chromosome ena gene 2237303 2237575 . - . ID=gene:Rv1993c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1993c;logic_name=ena Chromosome ena mRNA 2237303 2237575 . - . ID=transcript:Rv1993c;Parent=gene:Rv1993c;biotype=protein_coding;transcript_id=Rv1993c Chromosome ena exon 2237303 2237575 . - . Parent=transcript:Rv1993c;Name=Rv1993c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1993c-1;rank=1 Chromosome ena CDS 2237303 2237575 . - 0 ID=CDS:Rv1993c;Parent=transcript:Rv1993c;protein_id=Rv1993c ### -Chromosome ena gene 2237628 2237984 . - . ID=gene:Rv1994c;Name=cmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator CmtR (ArsR-SmtB family);gene_id=Rv1994c;logic_name=ena +Chromosome ena gene 2237628 2237984 . - . ID=gene:Rv1994c;Name=cmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator CmtR (ArsR-SmtB family);gene_id=Rv1994c;logic_name=ena Chromosome ena mRNA 2237628 2237984 . - . ID=transcript:Rv1994c;Parent=gene:Rv1994c;Name=cmtR-1;biotype=protein_coding;transcript_id=Rv1994c Chromosome ena exon 2237628 2237984 . - . Parent=transcript:Rv1994c;Name=Rv1994c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1994c-1;rank=1 Chromosome ena CDS 2237628 2237984 . - 0 ID=CDS:Rv1994c;Parent=transcript:Rv1994c;protein_id=Rv1994c ### -Chromosome ena gene 2238141 2238908 . + . ID=gene:Rv1995;biotype=protein_coding;description=Unknown protein;gene_id=Rv1995;logic_name=ena +Chromosome ena gene 2238141 2238908 . + . ID=gene:Rv1995;biotype=protein_coding;description=Unknown protein;gene_id=Rv1995;logic_name=ena Chromosome ena mRNA 2238141 2238908 . + . ID=transcript:Rv1995;Parent=gene:Rv1995;biotype=protein_coding;transcript_id=Rv1995 Chromosome ena exon 2238141 2238908 . + . Parent=transcript:Rv1995;Name=Rv1995-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1995-1;rank=1 Chromosome ena CDS 2238141 2238908 . + 0 ID=CDS:Rv1995;Parent=transcript:Rv1995;protein_id=Rv1995 ### -Chromosome ena gene 2239004 2239957 . + . ID=gene:Rv1996;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv1996;logic_name=ena +Chromosome ena gene 2239004 2239957 . + . ID=gene:Rv1996;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv1996;logic_name=ena Chromosome ena mRNA 2239004 2239957 . + . ID=transcript:Rv1996;Parent=gene:Rv1996;biotype=protein_coding;transcript_id=Rv1996 Chromosome ena exon 2239004 2239957 . + . Parent=transcript:Rv1996;Name=Rv1996-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1996-1;rank=1 Chromosome ena CDS 2239004 2239957 . + 0 ID=CDS:Rv1996;Parent=transcript:Rv1996;protein_id=Rv1996 ### -Chromosome ena gene 2240159 2242876 . + . ID=gene:Rv1997;Name=ctpF;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase A CtpF;gene_id=Rv1997;logic_name=ena +Chromosome ena gene 2240159 2242876 . + . ID=gene:Rv1997;Name=ctpF;biotype=protein_coding;description=Probable metal cation transporter P-type ATPase A CtpF;gene_id=Rv1997;logic_name=ena Chromosome ena mRNA 2240159 2242876 . + . ID=transcript:Rv1997;Parent=gene:Rv1997;Name=ctpF-1;biotype=protein_coding;transcript_id=Rv1997 Chromosome ena exon 2240159 2242876 . + . Parent=transcript:Rv1997;Name=Rv1997-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1997-1;rank=1 Chromosome ena CDS 2240159 2242876 . + 0 ID=CDS:Rv1997;Parent=transcript:Rv1997;protein_id=Rv1997 ### -Chromosome ena gene 2242945 2243721 . - . ID=gene:Rv1998c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1998c;logic_name=ena +Chromosome ena gene 2242945 2243721 . - . ID=gene:Rv1998c;biotype=protein_coding;description=Conserved protein;gene_id=Rv1998c;logic_name=ena Chromosome ena mRNA 2242945 2243721 . - . ID=transcript:Rv1998c;Parent=gene:Rv1998c;biotype=protein_coding;transcript_id=Rv1998c Chromosome ena exon 2242945 2243721 . - . Parent=transcript:Rv1998c;Name=Rv1998c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1998c-1;rank=1 Chromosome ena CDS 2242945 2243721 . - 0 ID=CDS:Rv1998c;Parent=transcript:Rv1998c;protein_id=Rv1998c ### -Chromosome ena gene 2243816 2245138 . - . ID=gene:Rv1999c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1999c;logic_name=ena +Chromosome ena gene 2243816 2245138 . - . ID=gene:Rv1999c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv1999c;logic_name=ena Chromosome ena mRNA 2243816 2245138 . - . ID=transcript:Rv1999c;Parent=gene:Rv1999c;biotype=protein_coding;transcript_id=Rv1999c Chromosome ena exon 2243816 2245138 . - . Parent=transcript:Rv1999c;Name=Rv1999c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv1999c-1;rank=1 Chromosome ena CDS 2243816 2245138 . - 0 ID=CDS:Rv1999c;Parent=transcript:Rv1999c;protein_id=Rv1999c ### -Chromosome ena gene 2245209 2246822 . + . ID=gene:Rv2000;biotype=protein_coding;description=Unknown protein;gene_id=Rv2000;logic_name=ena +Chromosome ena gene 2245209 2246822 . + . ID=gene:Rv2000;biotype=protein_coding;description=Unknown protein;gene_id=Rv2000;logic_name=ena Chromosome ena mRNA 2245209 2246822 . + . ID=transcript:Rv2000;Parent=gene:Rv2000;biotype=protein_coding;transcript_id=Rv2000 Chromosome ena exon 2245209 2246822 . + . Parent=transcript:Rv2000;Name=Rv2000-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2000-1;rank=1 Chromosome ena CDS 2245209 2246822 . + 0 ID=CDS:Rv2000;Parent=transcript:Rv2000;protein_id=Rv2000 ### -Chromosome ena gene 2246832 2247584 . + . ID=gene:Rv2001;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2001;logic_name=ena +Chromosome ena gene 2246832 2247584 . + . ID=gene:Rv2001;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2001;logic_name=ena Chromosome ena mRNA 2246832 2247584 . + . ID=transcript:Rv2001;Parent=gene:Rv2001;biotype=protein_coding;transcript_id=Rv2001 Chromosome ena exon 2246832 2247584 . + . Parent=transcript:Rv2001;Name=Rv2001-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2001-1;rank=1 Chromosome ena CDS 2246832 2247584 . + 0 ID=CDS:Rv2001;Parent=transcript:Rv2001;protein_id=Rv2001 ### -Chromosome ena gene 2247660 2248442 . + . ID=gene:Rv2002;Name=fabG3;biotype=protein_coding;description=Possible 20-beta-hydroxysteroid dehydrogenase FabG3 (cortisone reductase) ((R)-20-hydroxysteroid dehydrogenase);gene_id=Rv2002;logic_name=ena +Chromosome ena gene 2247660 2248442 . + . ID=gene:Rv2002;Name=fabG3;biotype=protein_coding;description=Possible 20-beta-hydroxysteroid dehydrogenase FabG3 (cortisone reductase) ((R)-20-hydroxysteroid dehydrogenase);gene_id=Rv2002;logic_name=ena Chromosome ena mRNA 2247660 2248442 . + . ID=transcript:Rv2002;Parent=gene:Rv2002;Name=fabG3-1;biotype=protein_coding;transcript_id=Rv2002 Chromosome ena exon 2247660 2248442 . + . Parent=transcript:Rv2002;Name=Rv2002-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2002-1;rank=1 Chromosome ena CDS 2247660 2248442 . + 0 ID=CDS:Rv2002;Parent=transcript:Rv2002;protein_id=Rv2002 ### -Chromosome ena gene 2248563 2249420 . - . ID=gene:Rv2003c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2003c;logic_name=ena +Chromosome ena gene 2248563 2249420 . - . ID=gene:Rv2003c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2003c;logic_name=ena Chromosome ena mRNA 2248563 2249420 . - . ID=transcript:Rv2003c;Parent=gene:Rv2003c;biotype=protein_coding;transcript_id=Rv2003c Chromosome ena exon 2248563 2249420 . - . Parent=transcript:Rv2003c;Name=Rv2003c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2003c-1;rank=1 Chromosome ena CDS 2248563 2249420 . - 0 ID=CDS:Rv2003c;Parent=transcript:Rv2003c;protein_id=Rv2003c ### -Chromosome ena gene 2249478 2250974 . - . ID=gene:Rv2004c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2004c;logic_name=ena +Chromosome ena gene 2249478 2250974 . - . ID=gene:Rv2004c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2004c;logic_name=ena Chromosome ena mRNA 2249478 2250974 . - . ID=transcript:Rv2004c;Parent=gene:Rv2004c;biotype=protein_coding;transcript_id=Rv2004c Chromosome ena exon 2249478 2250974 . - . Parent=transcript:Rv2004c;Name=Rv2004c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2004c-1;rank=1 Chromosome ena CDS 2249478 2250974 . - 0 ID=CDS:Rv2004c;Parent=transcript:Rv2004c;protein_id=Rv2004c ### -Chromosome ena gene 2250996 2251883 . - . ID=gene:Rv2005c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2005c;logic_name=ena +Chromosome ena gene 2250996 2251883 . - . ID=gene:Rv2005c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2005c;logic_name=ena Chromosome ena mRNA 2250996 2251883 . - . ID=transcript:Rv2005c;Parent=gene:Rv2005c;biotype=protein_coding;transcript_id=Rv2005c Chromosome ena exon 2250996 2251883 . - . Parent=transcript:Rv2005c;Name=Rv2005c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2005c-1;rank=1 Chromosome ena CDS 2250996 2251883 . - 0 ID=CDS:Rv2005c;Parent=transcript:Rv2005c;protein_id=Rv2005c ### -Chromosome ena gene 2252002 2255985 . + . ID=gene:Rv2006;Name=otsB1;biotype=protein_coding;description=Probable trehalose-6-phosphate phosphatase OtsB1 (trehalose-phosphatase) (TPP);gene_id=Rv2006;logic_name=ena +Chromosome ena gene 2252002 2255985 . + . ID=gene:Rv2006;Name=otsB1;biotype=protein_coding;description=Probable trehalose-6-phosphate phosphatase OtsB1 (trehalose-phosphatase) (TPP);gene_id=Rv2006;logic_name=ena Chromosome ena mRNA 2252002 2255985 . + . ID=transcript:Rv2006;Parent=gene:Rv2006;Name=otsB1-1;biotype=protein_coding;transcript_id=Rv2006 Chromosome ena exon 2252002 2255985 . + . Parent=transcript:Rv2006;Name=Rv2006-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2006-1;rank=1 Chromosome ena CDS 2252002 2255985 . + 0 ID=CDS:Rv2006;Parent=transcript:Rv2006;protein_id=Rv2006 ### -Chromosome ena gene 2256084 2256428 . - . ID=gene:Rv2007c;Name=fdxA;biotype=protein_coding;description=Ferredoxin FdxA;gene_id=Rv2007c;logic_name=ena +Chromosome ena gene 2256084 2256428 . - . ID=gene:Rv2007c;Name=fdxA;biotype=protein_coding;description=Ferredoxin FdxA;gene_id=Rv2007c;logic_name=ena Chromosome ena mRNA 2256084 2256428 . - . ID=transcript:Rv2007c;Parent=gene:Rv2007c;Name=fdxA-1;biotype=protein_coding;transcript_id=Rv2007c Chromosome ena exon 2256084 2256428 . - . Parent=transcript:Rv2007c;Name=Rv2007c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2007c-1;rank=1 Chromosome ena CDS 2256084 2256428 . - 0 ID=CDS:Rv2007c;Parent=transcript:Rv2007c;protein_id=Rv2007c ### -Chromosome ena gene 2256617 2257942 . - . ID=gene:Rv2008c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2008c;logic_name=ena +Chromosome ena gene 2256617 2257942 . - . ID=gene:Rv2008c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2008c;logic_name=ena Chromosome ena mRNA 2256617 2257942 . - . ID=transcript:Rv2008c;Parent=gene:Rv2008c;biotype=protein_coding;transcript_id=Rv2008c Chromosome ena exon 2256617 2257942 . - . Parent=transcript:Rv2008c;Name=Rv2008c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2008c-1;rank=1 Chromosome ena CDS 2256617 2257942 . - 0 ID=CDS:Rv2008c;Parent=transcript:Rv2008c;protein_id=Rv2008c ### -Chromosome ena gene 2258030 2258272 . + . ID=gene:Rv2009;Name=vapB15;biotype=protein_coding;description=Antitoxin VapB15;gene_id=Rv2009;logic_name=ena +Chromosome ena gene 2258030 2258272 . + . ID=gene:Rv2009;Name=vapB15;biotype=protein_coding;description=Antitoxin VapB15;gene_id=Rv2009;logic_name=ena Chromosome ena mRNA 2258030 2258272 . + . ID=transcript:Rv2009;Parent=gene:Rv2009;Name=vapB15-1;biotype=protein_coding;transcript_id=Rv2009 Chromosome ena exon 2258030 2258272 . + . Parent=transcript:Rv2009;Name=Rv2009-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2009-1;rank=1 Chromosome ena CDS 2258030 2258272 . + 0 ID=CDS:Rv2009;Parent=transcript:Rv2009;protein_id=Rv2009 ### -Chromosome ena gene 2258273 2258671 . + . ID=gene:Rv2010;Name=vapC15;biotype=protein_coding;description=Toxin VapC15;gene_id=Rv2010;logic_name=ena +Chromosome ena gene 2258273 2258671 . + . ID=gene:Rv2010;Name=vapC15;biotype=protein_coding;description=Toxin VapC15;gene_id=Rv2010;logic_name=ena Chromosome ena mRNA 2258273 2258671 . + . ID=transcript:Rv2010;Parent=gene:Rv2010;Name=vapC15-1;biotype=protein_coding;transcript_id=Rv2010 Chromosome ena exon 2258273 2258671 . + . Parent=transcript:Rv2010;Name=Rv2010-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2010-1;rank=1 Chromosome ena CDS 2258273 2258671 . + 0 ID=CDS:Rv2010;Parent=transcript:Rv2010;protein_id=Rv2010 ### -Chromosome ena gene 2258854 2259285 . - . ID=gene:Rv2011c;biotype=protein_coding;description=Conserved hypothetical protein%2C probable transcription repressor.;gene_id=Rv2011c;logic_name=ena +Chromosome ena gene 2258854 2259285 . - . ID=gene:Rv2011c;biotype=protein_coding;description=Conserved hypothetical protein%2C probable transcription repressor.;gene_id=Rv2011c;logic_name=ena Chromosome ena mRNA 2258854 2259285 . - . ID=transcript:Rv2011c;Parent=gene:Rv2011c;biotype=protein_coding;transcript_id=Rv2011c Chromosome ena exon 2258854 2259285 . - . Parent=transcript:Rv2011c;Name=Rv2011c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2011c-1;rank=1 Chromosome ena CDS 2258854 2259285 . - 0 ID=CDS:Rv2011c;Parent=transcript:Rv2011c;protein_id=Rv2011c ### -Chromosome ena gene 2259326 2259820 . + . ID=gene:Rv2012;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2012;logic_name=ena +Chromosome ena gene 2259326 2259820 . + . ID=gene:Rv2012;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2012;logic_name=ena Chromosome ena mRNA 2259326 2259820 . + . ID=transcript:Rv2012;Parent=gene:Rv2012;biotype=protein_coding;transcript_id=Rv2012 Chromosome ena exon 2259326 2259820 . + . Parent=transcript:Rv2012;Name=Rv2012-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2012-1;rank=1 Chromosome ena CDS 2259326 2259820 . + 0 ID=CDS:Rv2012;Parent=transcript:Rv2012;protein_id=Rv2012 ### -Chromosome ena_mobile_element biological_region 2260443 2261670 . + . external_name=IS1607%2C len: 1228 nt. Vestigial Insertion sequence element%2C IS1607.;logic_name=ena_mobile_element +Chromosome ena_mobile_element biological_region 2260443 2261670 . + . external_name=IS1607%2C len: 1228 nt. Vestigial Insertion sequence element%2C IS1607.;logic_name=ena_mobile_element Chromosome ena gene 2260665 2261144 . + . ID=gene:Rv2013;biotype=protein_coding;description=Transposase;gene_id=Rv2013;logic_name=ena Chromosome ena mRNA 2260665 2261144 . + . ID=transcript:Rv2013;Parent=gene:Rv2013;biotype=protein_coding;transcript_id=Rv2013 Chromosome ena exon 2260665 2261144 . + . Parent=transcript:Rv2013;Name=Rv2013-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2013-1;rank=1 @@ -10547,176 +10547,176 @@ Chromosome ena mRNA 2261098 2261688 . + . ID=transcript:Rv2014;Parent=gene:Rv201 Chromosome ena exon 2261098 2261688 . + . Parent=transcript:Rv2014;Name=Rv2014-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2014-1;rank=1 Chromosome ena CDS 2261098 2261688 . + 0 ID=CDS:Rv2014;Parent=transcript:Rv2014;protein_id=Rv2014 ### -Chromosome ena gene 2261816 2263072 . - . ID=gene:Rv2015c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2015c;logic_name=ena +Chromosome ena gene 2261816 2263072 . - . ID=gene:Rv2015c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2015c;logic_name=ena Chromosome ena mRNA 2261816 2263072 . - . ID=transcript:Rv2015c;Parent=gene:Rv2015c;biotype=protein_coding;transcript_id=Rv2015c Chromosome ena exon 2261816 2263072 . - . Parent=transcript:Rv2015c;Name=Rv2015c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2015c-1;rank=1 Chromosome ena CDS 2261816 2263072 . - 0 ID=CDS:Rv2015c;Parent=transcript:Rv2015c;protein_id=Rv2015c ### -Chromosome ena gene 2263426 2264001 . + . ID=gene:Rv2016;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2016;logic_name=ena +Chromosome ena gene 2263426 2264001 . + . ID=gene:Rv2016;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2016;logic_name=ena Chromosome ena mRNA 2263426 2264001 . + . ID=transcript:Rv2016;Parent=gene:Rv2016;biotype=protein_coding;transcript_id=Rv2016 Chromosome ena exon 2263426 2264001 . + . Parent=transcript:Rv2016;Name=Rv2016-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2016-1;rank=1 Chromosome ena CDS 2263426 2264001 . + 0 ID=CDS:Rv2016;Parent=transcript:Rv2016;protein_id=Rv2016 ### -Chromosome ena gene 2263998 2265038 . + . ID=gene:Rv2017;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv2017;logic_name=ena +Chromosome ena gene 2263998 2265038 . + . ID=gene:Rv2017;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv2017;logic_name=ena Chromosome ena mRNA 2263998 2265038 . + . ID=transcript:Rv2017;Parent=gene:Rv2017;biotype=protein_coding;transcript_id=Rv2017 Chromosome ena exon 2263998 2265038 . + . Parent=transcript:Rv2017;Name=Rv2017-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2017-1;rank=1 Chromosome ena CDS 2263998 2265038 . + 0 ID=CDS:Rv2017;Parent=transcript:Rv2017;protein_id=Rv2017 ### -Chromosome ena gene 2265280 2265999 . + . ID=gene:Rv2018;biotype=protein_coding;description=Conserved protein;gene_id=Rv2018;logic_name=ena +Chromosome ena gene 2265280 2265999 . + . ID=gene:Rv2018;biotype=protein_coding;description=Conserved protein;gene_id=Rv2018;logic_name=ena Chromosome ena mRNA 2265280 2265999 . + . ID=transcript:Rv2018;Parent=gene:Rv2018;biotype=protein_coding;transcript_id=Rv2018 Chromosome ena exon 2265280 2265999 . + . Parent=transcript:Rv2018;Name=Rv2018-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2018-1;rank=1 Chromosome ena CDS 2265280 2265999 . + 0 ID=CDS:Rv2018;Parent=transcript:Rv2018;protein_id=Rv2018 ### -Chromosome ena gene 2265989 2266405 . + . ID=gene:Rv2019;biotype=protein_coding;description=Conserved protein;gene_id=Rv2019;logic_name=ena +Chromosome ena gene 2265989 2266405 . + . ID=gene:Rv2019;biotype=protein_coding;description=Conserved protein;gene_id=Rv2019;logic_name=ena Chromosome ena mRNA 2265989 2266405 . + . ID=transcript:Rv2019;Parent=gene:Rv2019;biotype=protein_coding;transcript_id=Rv2019 Chromosome ena exon 2265989 2266405 . + . Parent=transcript:Rv2019;Name=Rv2019-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2019-1;rank=1 Chromosome ena CDS 2265989 2266405 . + 0 ID=CDS:Rv2019;Parent=transcript:Rv2019;protein_id=Rv2019 ### -Chromosome ena gene 2266421 2266720 . - . ID=gene:Rv2020c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2020c;logic_name=ena +Chromosome ena gene 2266421 2266720 . - . ID=gene:Rv2020c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2020c;logic_name=ena Chromosome ena mRNA 2266421 2266720 . - . ID=transcript:Rv2020c;Parent=gene:Rv2020c;biotype=protein_coding;transcript_id=Rv2020c Chromosome ena exon 2266421 2266720 . - . Parent=transcript:Rv2020c;Name=Rv2020c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2020c-1;rank=1 Chromosome ena CDS 2266421 2266720 . - 0 ID=CDS:Rv2020c;Parent=transcript:Rv2020c;protein_id=Rv2020c ### -Chromosome ena gene 2266805 2267110 . - . ID=gene:Rv2021c;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv2021c;logic_name=ena +Chromosome ena gene 2266805 2267110 . - . ID=gene:Rv2021c;biotype=protein_coding;description=Transcriptional regulatory protein;gene_id=Rv2021c;logic_name=ena Chromosome ena mRNA 2266805 2267110 . - . ID=transcript:Rv2021c;Parent=gene:Rv2021c;biotype=protein_coding;transcript_id=Rv2021c Chromosome ena exon 2266805 2267110 . - . Parent=transcript:Rv2021c;Name=Rv2021c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2021c-1;rank=1 Chromosome ena CDS 2266805 2267110 . - 0 ID=CDS:Rv2021c;Parent=transcript:Rv2021c;protein_id=Rv2021c ### -Chromosome ena gene 2267119 2267724 . - . ID=gene:Rv2022c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2022c;logic_name=ena +Chromosome ena gene 2267119 2267724 . - . ID=gene:Rv2022c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2022c;logic_name=ena Chromosome ena mRNA 2267119 2267724 . - . ID=transcript:Rv2022c;Parent=gene:Rv2022c;biotype=protein_coding;transcript_id=Rv2022c Chromosome ena exon 2267119 2267724 . - . Parent=transcript:Rv2022c;Name=Rv2022c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2022c-1;rank=1 Chromosome ena CDS 2267119 2267724 . - 0 ID=CDS:Rv2022c;Parent=transcript:Rv2022c;protein_id=Rv2022c ### -Chromosome ena gene 2267749 2268108 . - . ID=gene:Rv2023c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2023c;logic_name=ena +Chromosome ena gene 2267749 2268108 . - . ID=gene:Rv2023c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2023c;logic_name=ena Chromosome ena mRNA 2267749 2268108 . - . ID=transcript:Rv2023c;Parent=gene:Rv2023c;biotype=protein_coding;transcript_id=Rv2023c Chromosome ena exon 2267749 2268108 . - . Parent=transcript:Rv2023c;Name=Rv2023c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2023c-1;rank=1 Chromosome ena CDS 2267749 2268108 . - 0 ID=CDS:Rv2023c;Parent=transcript:Rv2023c;protein_id=Rv2023c ### -Chromosome ena pseudogene 2268268 2268726 . - . ID=gene:Rv2023A;biotype=pseudogene;description=Hypothetical protein%2C pseudogene;gene_id=Rv2023A;logic_name=ena +Chromosome ena pseudogene 2268268 2268726 . - . ID=gene:Rv2023A;biotype=pseudogene;description=Hypothetical protein%2C pseudogene;gene_id=Rv2023A;logic_name=ena Chromosome ena pseudogene 2268268 2268726 . - . ID=transcript:Rv2023A;Parent=gene:Rv2023A;biotype=pseudogene;transcript_id=Rv2023A Chromosome ena exon 2268268 2268726 . - . Parent=transcript:Rv2023A;Name=Rv2023A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2023A-1;rank=1 ### -Chromosome ena gene 2268693 2270240 . - . ID=gene:Rv2024c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2024c;logic_name=ena +Chromosome ena gene 2268693 2270240 . - . ID=gene:Rv2024c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2024c;logic_name=ena Chromosome ena mRNA 2268693 2270240 . - . ID=transcript:Rv2024c;Parent=gene:Rv2024c;biotype=protein_coding;transcript_id=Rv2024c Chromosome ena exon 2268693 2270240 . - . Parent=transcript:Rv2024c;Name=Rv2024c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2024c-1;rank=1 Chromosome ena CDS 2268693 2270240 . - 0 ID=CDS:Rv2024c;Parent=transcript:Rv2024c;protein_id=Rv2024c ### -Chromosome ena gene 2270750 2271748 . - . ID=gene:Rv2025c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv2025c;logic_name=ena +Chromosome ena gene 2270750 2271748 . - . ID=gene:Rv2025c;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv2025c;logic_name=ena Chromosome ena mRNA 2270750 2271748 . - . ID=transcript:Rv2025c;Parent=gene:Rv2025c;biotype=protein_coding;transcript_id=Rv2025c Chromosome ena exon 2270750 2271748 . - . Parent=transcript:Rv2025c;Name=Rv2025c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2025c-1;rank=1 Chromosome ena CDS 2270750 2271748 . - 0 ID=CDS:Rv2025c;Parent=transcript:Rv2025c;protein_id=Rv2025c ### -Chromosome ena gene 2271863 2272747 . - . ID=gene:Rv2026c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2026c;logic_name=ena +Chromosome ena gene 2271863 2272747 . - . ID=gene:Rv2026c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2026c;logic_name=ena Chromosome ena mRNA 2271863 2272747 . - . ID=transcript:Rv2026c;Parent=gene:Rv2026c;biotype=protein_coding;transcript_id=Rv2026c Chromosome ena exon 2271863 2272747 . - . Parent=transcript:Rv2026c;Name=Rv2026c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2026c-1;rank=1 Chromosome ena CDS 2271863 2272747 . - 0 ID=CDS:Rv2026c;Parent=transcript:Rv2026c;protein_id=Rv2026c ### -Chromosome ena gene 2272787 2274508 . - . ID=gene:Rv2027c;Name=dosT;biotype=protein_coding;description=Two component sensor histidine kinase DosT;gene_id=Rv2027c;logic_name=ena +Chromosome ena gene 2272787 2274508 . - . ID=gene:Rv2027c;Name=dosT;biotype=protein_coding;description=Two component sensor histidine kinase DosT;gene_id=Rv2027c;logic_name=ena Chromosome ena mRNA 2272787 2274508 . - . ID=transcript:Rv2027c;Parent=gene:Rv2027c;Name=dosT-1;biotype=protein_coding;transcript_id=Rv2027c Chromosome ena exon 2272787 2274508 . - . Parent=transcript:Rv2027c;Name=Rv2027c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2027c-1;rank=1 Chromosome ena CDS 2272787 2274508 . - 0 ID=CDS:Rv2027c;Parent=transcript:Rv2027c;protein_id=Rv2027c ### -Chromosome ena gene 2274569 2275408 . - . ID=gene:Rv2028c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2028c;logic_name=ena +Chromosome ena gene 2274569 2275408 . - . ID=gene:Rv2028c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2028c;logic_name=ena Chromosome ena mRNA 2274569 2275408 . - . ID=transcript:Rv2028c;Parent=gene:Rv2028c;biotype=protein_coding;transcript_id=Rv2028c Chromosome ena exon 2274569 2275408 . - . Parent=transcript:Rv2028c;Name=Rv2028c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2028c-1;rank=1 Chromosome ena CDS 2274569 2275408 . - 0 ID=CDS:Rv2028c;Parent=transcript:Rv2028c;protein_id=Rv2028c ### -Chromosome ena gene 2275405 2276424 . - . ID=gene:Rv2029c;Name=pfkB;biotype=protein_coding;description=6-phosphofructokinase PfkB (phosphohexokinase) (phosphofructokinase);gene_id=Rv2029c;logic_name=ena +Chromosome ena gene 2275405 2276424 . - . ID=gene:Rv2029c;Name=pfkB;biotype=protein_coding;description=6-phosphofructokinase PfkB (phosphohexokinase) (phosphofructokinase);gene_id=Rv2029c;logic_name=ena Chromosome ena mRNA 2275405 2276424 . - . ID=transcript:Rv2029c;Parent=gene:Rv2029c;Name=pfkB-1;biotype=protein_coding;transcript_id=Rv2029c Chromosome ena exon 2275405 2276424 . - . Parent=transcript:Rv2029c;Name=Rv2029c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2029c-1;rank=1 Chromosome ena CDS 2275405 2276424 . - 0 ID=CDS:Rv2029c;Parent=transcript:Rv2029c;protein_id=Rv2029c ### -Chromosome ena gene 2276441 2278486 . - . ID=gene:Rv2030c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2030c;logic_name=ena +Chromosome ena gene 2276441 2278486 . - . ID=gene:Rv2030c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2030c;logic_name=ena Chromosome ena mRNA 2276441 2278486 . - . ID=transcript:Rv2030c;Parent=gene:Rv2030c;biotype=protein_coding;transcript_id=Rv2030c Chromosome ena exon 2276441 2278486 . - . Parent=transcript:Rv2030c;Name=Rv2030c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2030c-1;rank=1 Chromosome ena CDS 2276441 2278486 . - 0 ID=CDS:Rv2030c;Parent=transcript:Rv2030c;protein_id=Rv2030c ### -Chromosome ena gene 2278498 2278932 . - . ID=gene:Rv2031c;Name=hspX;biotype=protein_coding;description=Heat shock protein HspX (alpha-crystallin homolog) (14 kDa antigen) (HSP16.3);gene_id=Rv2031c;logic_name=ena +Chromosome ena gene 2278498 2278932 . - . ID=gene:Rv2031c;Name=hspX;biotype=protein_coding;description=Heat shock protein HspX (alpha-crystallin homolog) (14 kDa antigen) (HSP16.3);gene_id=Rv2031c;logic_name=ena Chromosome ena mRNA 2278498 2278932 . - . ID=transcript:Rv2031c;Parent=gene:Rv2031c;Name=hspX-1;biotype=protein_coding;transcript_id=Rv2031c Chromosome ena exon 2278498 2278932 . - . Parent=transcript:Rv2031c;Name=Rv2031c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2031c-1;rank=1 Chromosome ena CDS 2278498 2278932 . - 0 ID=CDS:Rv2031c;Parent=transcript:Rv2031c;protein_id=Rv2031c ### -Chromosome ena gene 2279129 2280124 . + . ID=gene:Rv2032;Name=acg;biotype=protein_coding;description=Conserved protein Acg;gene_id=Rv2032;logic_name=ena +Chromosome ena gene 2279129 2280124 . + . ID=gene:Rv2032;Name=acg;biotype=protein_coding;description=Conserved protein Acg;gene_id=Rv2032;logic_name=ena Chromosome ena mRNA 2279129 2280124 . + . ID=transcript:Rv2032;Parent=gene:Rv2032;Name=acg-1;biotype=protein_coding;transcript_id=Rv2032 Chromosome ena exon 2279129 2280124 . + . Parent=transcript:Rv2032;Name=Rv2032-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2032-1;rank=1 Chromosome ena CDS 2279129 2280124 . + 0 ID=CDS:Rv2032;Parent=transcript:Rv2032;protein_id=Rv2032 ### -Chromosome ena gene 2280240 2281082 . - . ID=gene:Rv2033c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2033c;logic_name=ena +Chromosome ena gene 2280240 2281082 . - . ID=gene:Rv2033c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2033c;logic_name=ena Chromosome ena mRNA 2280240 2281082 . - . ID=transcript:Rv2033c;Parent=gene:Rv2033c;biotype=protein_coding;transcript_id=Rv2033c Chromosome ena exon 2280240 2281082 . - . Parent=transcript:Rv2033c;Name=Rv2033c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2033c-1;rank=1 Chromosome ena CDS 2280240 2281082 . - 0 ID=CDS:Rv2033c;Parent=transcript:Rv2033c;protein_id=Rv2033c ### -Chromosome ena gene 2281294 2281617 . + . ID=gene:Rv2034;biotype=protein_coding;description=ArsR repressor protein;gene_id=Rv2034;logic_name=ena +Chromosome ena gene 2281294 2281617 . + . ID=gene:Rv2034;biotype=protein_coding;description=ArsR repressor protein;gene_id=Rv2034;logic_name=ena Chromosome ena mRNA 2281294 2281617 . + . ID=transcript:Rv2034;Parent=gene:Rv2034;biotype=protein_coding;transcript_id=Rv2034 Chromosome ena exon 2281294 2281617 . + . Parent=transcript:Rv2034;Name=Rv2034-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2034-1;rank=1 Chromosome ena CDS 2281294 2281617 . + 0 ID=CDS:Rv2034;Parent=transcript:Rv2034;protein_id=Rv2034 ### -Chromosome ena gene 2281614 2282102 . + . ID=gene:Rv2035;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2035;logic_name=ena +Chromosome ena gene 2281614 2282102 . + . ID=gene:Rv2035;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2035;logic_name=ena Chromosome ena mRNA 2281614 2282102 . + . ID=transcript:Rv2035;Parent=gene:Rv2035;biotype=protein_coding;transcript_id=Rv2035 Chromosome ena exon 2281614 2282102 . + . Parent=transcript:Rv2035;Name=Rv2035-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2035-1;rank=1 Chromosome ena CDS 2281614 2282102 . + 0 ID=CDS:Rv2035;Parent=transcript:Rv2035;protein_id=Rv2035 ### -Chromosome ena gene 2282099 2282740 . + . ID=gene:Rv2036;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2036;logic_name=ena +Chromosome ena gene 2282099 2282740 . + . ID=gene:Rv2036;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2036;logic_name=ena Chromosome ena mRNA 2282099 2282740 . + . ID=transcript:Rv2036;Parent=gene:Rv2036;biotype=protein_coding;transcript_id=Rv2036 Chromosome ena exon 2282099 2282740 . + . Parent=transcript:Rv2036;Name=Rv2036-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2036-1;rank=1 Chromosome ena CDS 2282099 2282740 . + 0 ID=CDS:Rv2036;Parent=transcript:Rv2036;protein_id=Rv2036 ### -Chromosome ena gene 2282747 2283721 . - . ID=gene:Rv2037c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2037c;logic_name=ena +Chromosome ena gene 2282747 2283721 . - . ID=gene:Rv2037c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2037c;logic_name=ena Chromosome ena mRNA 2282747 2283721 . - . ID=transcript:Rv2037c;Parent=gene:Rv2037c;biotype=protein_coding;transcript_id=Rv2037c Chromosome ena exon 2282747 2283721 . - . Parent=transcript:Rv2037c;Name=Rv2037c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2037c-1;rank=1 Chromosome ena CDS 2282747 2283721 . - 0 ID=CDS:Rv2037c;Parent=transcript:Rv2037c;protein_id=Rv2037c ### -Chromosome ena gene 2283723 2284796 . - . ID=gene:Rv2038c;biotype=protein_coding;description=Probable sugar-transport ATP-binding protein ABC transporter;gene_id=Rv2038c;logic_name=ena +Chromosome ena gene 2283723 2284796 . - . ID=gene:Rv2038c;biotype=protein_coding;description=Probable sugar-transport ATP-binding protein ABC transporter;gene_id=Rv2038c;logic_name=ena Chromosome ena mRNA 2283723 2284796 . - . ID=transcript:Rv2038c;Parent=gene:Rv2038c;biotype=protein_coding;transcript_id=Rv2038c Chromosome ena exon 2283723 2284796 . - . Parent=transcript:Rv2038c;Name=Rv2038c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2038c-1;rank=1 Chromosome ena CDS 2283723 2284796 . - 0 ID=CDS:Rv2038c;Parent=transcript:Rv2038c;protein_id=Rv2038c ### -Chromosome ena gene 2284799 2285641 . - . ID=gene:Rv2039c;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter;gene_id=Rv2039c;logic_name=ena +Chromosome ena gene 2284799 2285641 . - . ID=gene:Rv2039c;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter;gene_id=Rv2039c;logic_name=ena Chromosome ena mRNA 2284799 2285641 . - . ID=transcript:Rv2039c;Parent=gene:Rv2039c;biotype=protein_coding;transcript_id=Rv2039c Chromosome ena exon 2284799 2285641 . - . Parent=transcript:Rv2039c;Name=Rv2039c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2039c-1;rank=1 Chromosome ena CDS 2284799 2285641 . - 0 ID=CDS:Rv2039c;Parent=transcript:Rv2039c;protein_id=Rv2039c ### -Chromosome ena gene 2285628 2286530 . - . ID=gene:Rv2040c;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter;gene_id=Rv2040c;logic_name=ena +Chromosome ena gene 2285628 2286530 . - . ID=gene:Rv2040c;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter;gene_id=Rv2040c;logic_name=ena Chromosome ena mRNA 2285628 2286530 . - . ID=transcript:Rv2040c;Parent=gene:Rv2040c;biotype=protein_coding;transcript_id=Rv2040c Chromosome ena exon 2285628 2286530 . - . Parent=transcript:Rv2040c;Name=Rv2040c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2040c-1;rank=1 Chromosome ena CDS 2285628 2286530 . - 0 ID=CDS:Rv2040c;Parent=transcript:Rv2040c;protein_id=Rv2040c ### -Chromosome ena gene 2286527 2287846 . - . ID=gene:Rv2041c;biotype=protein_coding;description=Probable sugar-binding lipoprotein;gene_id=Rv2041c;logic_name=ena +Chromosome ena gene 2286527 2287846 . - . ID=gene:Rv2041c;biotype=protein_coding;description=Probable sugar-binding lipoprotein;gene_id=Rv2041c;logic_name=ena Chromosome ena mRNA 2286527 2287846 . - . ID=transcript:Rv2041c;Parent=gene:Rv2041c;biotype=protein_coding;transcript_id=Rv2041c Chromosome ena exon 2286527 2287846 . - . Parent=transcript:Rv2041c;Name=Rv2041c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2041c-1;rank=1 Chromosome ena CDS 2286527 2287846 . - 0 ID=CDS:Rv2041c;Parent=transcript:Rv2041c;protein_id=Rv2041c ### -Chromosome ena gene 2287884 2288681 . - . ID=gene:Rv2042c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2042c;logic_name=ena +Chromosome ena gene 2287884 2288681 . - . ID=gene:Rv2042c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2042c;logic_name=ena Chromosome ena mRNA 2287884 2288681 . - . ID=transcript:Rv2042c;Parent=gene:Rv2042c;biotype=protein_coding;transcript_id=Rv2042c Chromosome ena exon 2287884 2288681 . - . Parent=transcript:Rv2042c;Name=Rv2042c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2042c-1;rank=1 Chromosome ena CDS 2287884 2288681 . - 0 ID=CDS:Rv2042c;Parent=transcript:Rv2042c;protein_id=Rv2042c ### -Chromosome ena gene 2288681 2289241 . - . ID=gene:Rv2043c;Name=pncA;biotype=protein_coding;description=Pyrazinamidase/nicotinamidase PncA (PZase);gene_id=Rv2043c;logic_name=ena +Chromosome ena gene 2288681 2289241 . - . ID=gene:Rv2043c;Name=pncA;biotype=protein_coding;description=Pyrazinamidase/nicotinamidase PncA (PZase);gene_id=Rv2043c;logic_name=ena Chromosome ena mRNA 2288681 2289241 . - . ID=transcript:Rv2043c;Parent=gene:Rv2043c;Name=pncA-1;biotype=protein_coding;transcript_id=Rv2043c Chromosome ena exon 2288681 2289241 . - . Parent=transcript:Rv2043c;Name=Rv2043c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2043c-1;rank=1 Chromosome ena CDS 2288681 2289241 . - 0 ID=CDS:Rv2043c;Parent=transcript:Rv2043c;protein_id=Rv2043c ### -Chromosome ena gene 2289282 2289599 . - . ID=gene:Rv2044c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2044c;logic_name=ena +Chromosome ena gene 2289282 2289599 . - . ID=gene:Rv2044c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2044c;logic_name=ena Chromosome ena mRNA 2289282 2289599 . - . ID=transcript:Rv2044c;Parent=gene:Rv2044c;biotype=protein_coding;transcript_id=Rv2044c Chromosome ena exon 2289282 2289599 . - . Parent=transcript:Rv2044c;Name=Rv2044c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2044c-1;rank=1 Chromosome ena CDS 2289282 2289599 . - 0 ID=CDS:Rv2044c;Parent=transcript:Rv2044c;protein_id=Rv2044c ### -Chromosome ena gene 2289685 2291220 . - . ID=gene:Rv2045c;Name=lipT;biotype=protein_coding;description=Carboxylesterase LipT;gene_id=Rv2045c;logic_name=ena +Chromosome ena gene 2289685 2291220 . - . ID=gene:Rv2045c;Name=lipT;biotype=protein_coding;description=Carboxylesterase LipT;gene_id=Rv2045c;logic_name=ena Chromosome ena mRNA 2289685 2291220 . - . ID=transcript:Rv2045c;Parent=gene:Rv2045c;Name=lipT-1;biotype=protein_coding;transcript_id=Rv2045c Chromosome ena exon 2289685 2291220 . - . Parent=transcript:Rv2045c;Name=Rv2045c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2045c-1;rank=1 Chromosome ena CDS 2289685 2291220 . - 0 ID=CDS:Rv2045c;Parent=transcript:Rv2045c;protein_id=Rv2045c ### -Chromosome ena gene 2291269 2291925 . + . ID=gene:Rv2046;Name=lppI;biotype=protein_coding;description=Probable lipoprotein LppI;gene_id=Rv2046;logic_name=ena +Chromosome ena gene 2291269 2291925 . + . ID=gene:Rv2046;Name=lppI;biotype=protein_coding;description=Probable lipoprotein LppI;gene_id=Rv2046;logic_name=ena Chromosome ena mRNA 2291269 2291925 . + . ID=transcript:Rv2046;Parent=gene:Rv2046;Name=lppI-1;biotype=protein_coding;transcript_id=Rv2046 Chromosome ena exon 2291269 2291925 . + . Parent=transcript:Rv2046;Name=Rv2046-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2046-1;rank=1 Chromosome ena CDS 2291269 2291925 . + 0 ID=CDS:Rv2046;Parent=transcript:Rv2046;protein_id=Rv2046 ### -Chromosome ena gene 2291962 2294526 . - . ID=gene:Rv2047c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2047c;logic_name=ena +Chromosome ena gene 2291962 2294526 . - . ID=gene:Rv2047c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2047c;logic_name=ena Chromosome ena mRNA 2291962 2294526 . - . ID=transcript:Rv2047c;Parent=gene:Rv2047c;biotype=protein_coding;transcript_id=Rv2047c Chromosome ena exon 2291962 2294526 . - . Parent=transcript:Rv2047c;Name=Rv2047c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2047c-1;rank=1 Chromosome ena CDS 2291962 2294526 . - 0 ID=CDS:Rv2047c;Parent=transcript:Rv2047c;protein_id=Rv2047c ### -Chromosome ena gene 2294531 2306986 . - . ID=gene:Rv2048c;Name=pks12;biotype=protein_coding;description=Polyketide synthase Pks12;gene_id=Rv2048c;logic_name=ena +Chromosome ena gene 2294531 2306986 . - . ID=gene:Rv2048c;Name=pks12;biotype=protein_coding;description=Polyketide synthase Pks12;gene_id=Rv2048c;logic_name=ena Chromosome ena mRNA 2294531 2306986 . - . ID=transcript:Rv2048c;Parent=gene:Rv2048c;Name=pks12-1;biotype=protein_coding;transcript_id=Rv2048c Chromosome ena exon 2294531 2306986 . - . Parent=transcript:Rv2048c;Name=Rv2048c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2048c-1;rank=1 Chromosome ena CDS 2294531 2306986 . - 0 ID=CDS:Rv2048c;Parent=transcript:Rv2048c;protein_id=Rv2048c @@ -10726,477 +10726,477 @@ Chromosome ena transcript 2299745 2299886 . + . ID=transcript:EBG00000313323;Par Chromosome ena exon 2299745 2299886 . + . Parent=transcript:EBG00000313323;Name=EBG00000313323;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313323;rank=1 ### Chromosome ena_gene biological_region 2299745 2299886 . + . external_name=AL123456.3:gene:2299745..2299886;logic_name=ena_gene -Chromosome ena gene 2307293 2307517 . - . ID=gene:Rv2049c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2049c;logic_name=ena +Chromosome ena gene 2307293 2307517 . - . ID=gene:Rv2049c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2049c;logic_name=ena Chromosome ena mRNA 2307293 2307517 . - . ID=transcript:Rv2049c;Parent=gene:Rv2049c;biotype=protein_coding;transcript_id=Rv2049c Chromosome ena exon 2307293 2307517 . - . Parent=transcript:Rv2049c;Name=Rv2049c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2049c-1;rank=1 Chromosome ena CDS 2307293 2307517 . - 0 ID=CDS:Rv2049c;Parent=transcript:Rv2049c;protein_id=Rv2049c ### -Chromosome ena gene 2307821 2308156 . + . ID=gene:Rv2050;biotype=protein_coding;description=Conserved protein;gene_id=Rv2050;logic_name=ena +Chromosome ena gene 2307821 2308156 . + . ID=gene:Rv2050;biotype=protein_coding;description=Conserved protein;gene_id=Rv2050;logic_name=ena Chromosome ena mRNA 2307821 2308156 . + . ID=transcript:Rv2050;Parent=gene:Rv2050;biotype=protein_coding;transcript_id=Rv2050 Chromosome ena exon 2307821 2308156 . + . Parent=transcript:Rv2050;Name=Rv2050-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2050-1;rank=1 Chromosome ena CDS 2307821 2308156 . + 0 ID=CDS:Rv2050;Parent=transcript:Rv2050;protein_id=Rv2050 ### -Chromosome ena gene 2308131 2310755 . - . ID=gene:Rv2051c;Name=ppm1;biotype=protein_coding;description=Polyprenol-monophosphomannose synthase Ppm1;gene_id=Rv2051c;logic_name=ena +Chromosome ena gene 2308131 2310755 . - . ID=gene:Rv2051c;Name=ppm1;biotype=protein_coding;description=Polyprenol-monophosphomannose synthase Ppm1;gene_id=Rv2051c;logic_name=ena Chromosome ena mRNA 2308131 2310755 . - . ID=transcript:Rv2051c;Parent=gene:Rv2051c;Name=ppm1-1;biotype=protein_coding;transcript_id=Rv2051c Chromosome ena exon 2308131 2310755 . - . Parent=transcript:Rv2051c;Name=Rv2051c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2051c-1;rank=1 Chromosome ena CDS 2308131 2310755 . - 0 ID=CDS:Rv2051c;Parent=transcript:Rv2051c;protein_id=Rv2051c ### -Chromosome ena gene 2310913 2312517 . - . ID=gene:Rv2052c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2052c;logic_name=ena +Chromosome ena gene 2310913 2312517 . - . ID=gene:Rv2052c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2052c;logic_name=ena Chromosome ena mRNA 2310913 2312517 . - . ID=transcript:Rv2052c;Parent=gene:Rv2052c;biotype=protein_coding;transcript_id=Rv2052c Chromosome ena exon 2310913 2312517 . - . Parent=transcript:Rv2052c;Name=Rv2052c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2052c-1;rank=1 Chromosome ena CDS 2310913 2312517 . - 0 ID=CDS:Rv2052c;Parent=transcript:Rv2052c;protein_id=Rv2052c ### -Chromosome ena gene 2312522 2313049 . - . ID=gene:Rv2053c;Name=fxsA;biotype=protein_coding;description=Probable transmembrane protein FxsA;gene_id=Rv2053c;logic_name=ena +Chromosome ena gene 2312522 2313049 . - . ID=gene:Rv2053c;Name=fxsA;biotype=protein_coding;description=Probable transmembrane protein FxsA;gene_id=Rv2053c;logic_name=ena Chromosome ena mRNA 2312522 2313049 . - . ID=transcript:Rv2053c;Parent=gene:Rv2053c;Name=fxsA-1;biotype=protein_coding;transcript_id=Rv2053c Chromosome ena exon 2312522 2313049 . - . Parent=transcript:Rv2053c;Name=Rv2053c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2053c-1;rank=1 Chromosome ena CDS 2312522 2313049 . - 0 ID=CDS:Rv2053c;Parent=transcript:Rv2053c;protein_id=Rv2053c ### -Chromosome ena gene 2313125 2313838 . + . ID=gene:Rv2054;biotype=protein_coding;description=Conserved protein;gene_id=Rv2054;logic_name=ena +Chromosome ena gene 2313125 2313838 . + . ID=gene:Rv2054;biotype=protein_coding;description=Conserved protein;gene_id=Rv2054;logic_name=ena Chromosome ena mRNA 2313125 2313838 . + . ID=transcript:Rv2054;Parent=gene:Rv2054;biotype=protein_coding;transcript_id=Rv2054 Chromosome ena exon 2313125 2313838 . + . Parent=transcript:Rv2054;Name=Rv2054-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2054-1;rank=1 Chromosome ena CDS 2313125 2313838 . + 0 ID=CDS:Rv2054;Parent=transcript:Rv2054;protein_id=Rv2054 ### -Chromosome ena gene 2314087 2314353 . - . ID=gene:Rv2055c;Name=rpsR2;biotype=protein_coding;description=30S ribosomal protein S18 RpsR2;gene_id=Rv2055c;logic_name=ena +Chromosome ena gene 2314087 2314353 . - . ID=gene:Rv2055c;Name=rpsR2;biotype=protein_coding;description=30S ribosomal protein S18 RpsR2;gene_id=Rv2055c;logic_name=ena Chromosome ena mRNA 2314087 2314353 . - . ID=transcript:Rv2055c;Parent=gene:Rv2055c;Name=rpsR2-1;biotype=protein_coding;transcript_id=Rv2055c Chromosome ena exon 2314087 2314353 . - . Parent=transcript:Rv2055c;Name=Rv2055c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2055c-1;rank=1 Chromosome ena CDS 2314087 2314353 . - 0 ID=CDS:Rv2055c;Parent=transcript:Rv2055c;protein_id=Rv2055c ### -Chromosome ena gene 2314354 2314659 . - . ID=gene:Rv2056c;Name=rpsN2;biotype=protein_coding;description=30S ribosomal protein S14 RpsN2;gene_id=Rv2056c;logic_name=ena +Chromosome ena gene 2314354 2314659 . - . ID=gene:Rv2056c;Name=rpsN2;biotype=protein_coding;description=30S ribosomal protein S14 RpsN2;gene_id=Rv2056c;logic_name=ena Chromosome ena mRNA 2314354 2314659 . - . ID=transcript:Rv2056c;Parent=gene:Rv2056c;Name=rpsN2-1;biotype=protein_coding;transcript_id=Rv2056c Chromosome ena exon 2314354 2314659 . - . Parent=transcript:Rv2056c;Name=Rv2056c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2056c-1;rank=1 Chromosome ena CDS 2314354 2314659 . - 0 ID=CDS:Rv2056c;Parent=transcript:Rv2056c;protein_id=Rv2056c ### -Chromosome ena gene 2314661 2314825 . - . ID=gene:Rv2057c;Name=rpmG1;biotype=protein_coding;description=50S ribosomal protein L33 RpmG1;gene_id=Rv2057c;logic_name=ena +Chromosome ena gene 2314661 2314825 . - . ID=gene:Rv2057c;Name=rpmG1;biotype=protein_coding;description=50S ribosomal protein L33 RpmG1;gene_id=Rv2057c;logic_name=ena Chromosome ena mRNA 2314661 2314825 . - . ID=transcript:Rv2057c;Parent=gene:Rv2057c;Name=rpmG1-1;biotype=protein_coding;transcript_id=Rv2057c Chromosome ena exon 2314661 2314825 . - . Parent=transcript:Rv2057c;Name=Rv2057c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2057c-1;rank=1 Chromosome ena CDS 2314661 2314825 . - 0 ID=CDS:Rv2057c;Parent=transcript:Rv2057c;protein_id=Rv2057c ### -Chromosome ena gene 2314825 2315061 . - . ID=gene:Rv2058c;Name=rpmB2;biotype=protein_coding;description=50S ribosomal protein L28 RpmB2;gene_id=Rv2058c;logic_name=ena +Chromosome ena gene 2314825 2315061 . - . ID=gene:Rv2058c;Name=rpmB2;biotype=protein_coding;description=50S ribosomal protein L28 RpmB2;gene_id=Rv2058c;logic_name=ena Chromosome ena mRNA 2314825 2315061 . - . ID=transcript:Rv2058c;Parent=gene:Rv2058c;Name=rpmB2-1;biotype=protein_coding;transcript_id=Rv2058c Chromosome ena exon 2314825 2315061 . - . Parent=transcript:Rv2058c;Name=Rv2058c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2058c-1;rank=1 Chromosome ena CDS 2314825 2315061 . - 0 ID=CDS:Rv2058c;Parent=transcript:Rv2058c;protein_id=Rv2058c ### -Chromosome ena gene 2315174 2316709 . + . ID=gene:Rv2059;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2059;logic_name=ena +Chromosome ena gene 2315174 2316709 . + . ID=gene:Rv2059;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2059;logic_name=ena Chromosome ena mRNA 2315174 2316709 . + . ID=transcript:Rv2059;Parent=gene:Rv2059;biotype=protein_coding;transcript_id=Rv2059 Chromosome ena exon 2315174 2316709 . + . Parent=transcript:Rv2059;Name=Rv2059-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2059-1;rank=1 Chromosome ena CDS 2315174 2316709 . + 0 ID=CDS:Rv2059;Parent=transcript:Rv2059;protein_id=Rv2059 ### -Chromosome ena gene 2316279 2316680 . + . ID=gene:Rv2060;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2060;logic_name=ena +Chromosome ena gene 2316279 2316680 . + . ID=gene:Rv2060;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2060;logic_name=ena Chromosome ena mRNA 2316279 2316680 . + . ID=transcript:Rv2060;Parent=gene:Rv2060;biotype=protein_coding;transcript_id=Rv2060 Chromosome ena exon 2316279 2316680 . + . Parent=transcript:Rv2060;Name=Rv2060-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2060-1;rank=1 Chromosome ena CDS 2316279 2316680 . + 0 ID=CDS:Rv2060;Parent=transcript:Rv2060;protein_id=Rv2060 ### -Chromosome ena gene 2316681 2317085 . - . ID=gene:Rv2061c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2061c;logic_name=ena +Chromosome ena gene 2316681 2317085 . - . ID=gene:Rv2061c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2061c;logic_name=ena Chromosome ena mRNA 2316681 2317085 . - . ID=transcript:Rv2061c;Parent=gene:Rv2061c;biotype=protein_coding;transcript_id=Rv2061c Chromosome ena exon 2316681 2317085 . - . Parent=transcript:Rv2061c;Name=Rv2061c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2061c-1;rank=1 Chromosome ena CDS 2316681 2317085 . - 0 ID=CDS:Rv2061c;Parent=transcript:Rv2061c;protein_id=Rv2061c ### -Chromosome ena gene 2317169 2320753 . - . ID=gene:Rv2062c;Name=cobN;biotype=protein_coding;description=Cobalamin biosynthesis protein CobN;gene_id=Rv2062c;logic_name=ena +Chromosome ena gene 2317169 2320753 . - . ID=gene:Rv2062c;Name=cobN;biotype=protein_coding;description=Cobalamin biosynthesis protein CobN;gene_id=Rv2062c;logic_name=ena Chromosome ena mRNA 2317169 2320753 . - . ID=transcript:Rv2062c;Parent=gene:Rv2062c;Name=cobN-1;biotype=protein_coding;transcript_id=Rv2062c Chromosome ena exon 2317169 2320753 . - . Parent=transcript:Rv2062c;Name=Rv2062c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2062c-1;rank=1 Chromosome ena CDS 2317169 2320753 . - 0 ID=CDS:Rv2062c;Parent=transcript:Rv2062c;protein_id=Rv2062c ### -Chromosome ena gene 2320831 2321064 . + . ID=gene:Rv2063;Name=mazE7;biotype=protein_coding;description=Antitoxin MazE7;gene_id=Rv2063;logic_name=ena +Chromosome ena gene 2320831 2321064 . + . ID=gene:Rv2063;Name=mazE7;biotype=protein_coding;description=Antitoxin MazE7;gene_id=Rv2063;logic_name=ena Chromosome ena mRNA 2320831 2321064 . + . ID=transcript:Rv2063;Parent=gene:Rv2063;Name=mazE7-1;biotype=protein_coding;transcript_id=Rv2063 Chromosome ena exon 2320831 2321064 . + . Parent=transcript:Rv2063;Name=Rv2063-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2063-1;rank=1 Chromosome ena CDS 2320831 2321064 . + 0 ID=CDS:Rv2063;Parent=transcript:Rv2063;protein_id=Rv2063 ### -Chromosome ena gene 2321057 2321467 . + . ID=gene:Rv2063A;Name=mazF7;biotype=protein_coding;description=Possible toxin MazF7;gene_id=Rv2063A;logic_name=ena +Chromosome ena gene 2321057 2321467 . + . ID=gene:Rv2063A;Name=mazF7;biotype=protein_coding;description=Possible toxin MazF7;gene_id=Rv2063A;logic_name=ena Chromosome ena mRNA 2321057 2321467 . + . ID=transcript:Rv2063A;Parent=gene:Rv2063A;Name=mazF7-1;biotype=protein_coding;transcript_id=Rv2063A Chromosome ena exon 2321057 2321467 . + . Parent=transcript:Rv2063A;Name=Rv2063A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2063A-1;rank=1 Chromosome ena CDS 2321057 2321467 . + 0 ID=CDS:Rv2063A;Parent=transcript:Rv2063A;protein_id=Rv2063A ### -Chromosome ena gene 2321451 2322542 . + . ID=gene:Rv2064;Name=cobG;biotype=protein_coding;description=Precorrin-3B synthase CobG;gene_id=Rv2064;logic_name=ena +Chromosome ena gene 2321451 2322542 . + . ID=gene:Rv2064;Name=cobG;biotype=protein_coding;description=Precorrin-3B synthase CobG;gene_id=Rv2064;logic_name=ena Chromosome ena mRNA 2321451 2322542 . + . ID=transcript:Rv2064;Parent=gene:Rv2064;Name=cobG-1;biotype=protein_coding;transcript_id=Rv2064 Chromosome ena exon 2321451 2322542 . + . Parent=transcript:Rv2064;Name=Rv2064-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2064-1;rank=1 Chromosome ena CDS 2321451 2322542 . + 0 ID=CDS:Rv2064;Parent=transcript:Rv2064;protein_id=Rv2064 ### -Chromosome ena gene 2322552 2323178 . + . ID=gene:Rv2065;Name=cobH;biotype=protein_coding;description=Precorrin-8X methylmutase CobH (aka precorrin isomerase);gene_id=Rv2065;logic_name=ena +Chromosome ena gene 2322552 2323178 . + . ID=gene:Rv2065;Name=cobH;biotype=protein_coding;description=Precorrin-8X methylmutase CobH (aka precorrin isomerase);gene_id=Rv2065;logic_name=ena Chromosome ena mRNA 2322552 2323178 . + . ID=transcript:Rv2065;Parent=gene:Rv2065;Name=cobH-1;biotype=protein_coding;transcript_id=Rv2065 Chromosome ena exon 2322552 2323178 . + . Parent=transcript:Rv2065;Name=Rv2065-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2065-1;rank=1 Chromosome ena CDS 2322552 2323178 . + 0 ID=CDS:Rv2065;Parent=transcript:Rv2065;protein_id=Rv2065 ### -Chromosome ena gene 2323175 2324701 . + . ID=gene:Rv2066;Name=cobI;biotype=protein_coding;description=Probable bifunctional protein%2C CobI-COBJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase;gene_id=Rv2066;logic_name=ena +Chromosome ena gene 2323175 2324701 . + . ID=gene:Rv2066;Name=cobI;biotype=protein_coding;description=Probable bifunctional protein%2C CobI-COBJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase;gene_id=Rv2066;logic_name=ena Chromosome ena mRNA 2323175 2324701 . + . ID=transcript:Rv2066;Parent=gene:Rv2066;Name=cobI-1;biotype=protein_coding;transcript_id=Rv2066 Chromosome ena exon 2323175 2324701 . + . Parent=transcript:Rv2066;Name=Rv2066-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2066-1;rank=1 Chromosome ena CDS 2323175 2324701 . + 0 ID=CDS:Rv2066;Parent=transcript:Rv2066;protein_id=Rv2066 ### -Chromosome ena gene 2324647 2325870 . - . ID=gene:Rv2067c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2067c;logic_name=ena +Chromosome ena gene 2324647 2325870 . - . ID=gene:Rv2067c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2067c;logic_name=ena Chromosome ena mRNA 2324647 2325870 . - . ID=transcript:Rv2067c;Parent=gene:Rv2067c;biotype=protein_coding;transcript_id=Rv2067c Chromosome ena exon 2324647 2325870 . - . Parent=transcript:Rv2067c;Name=Rv2067c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2067c-1;rank=1 Chromosome ena CDS 2324647 2325870 . - 0 ID=CDS:Rv2067c;Parent=transcript:Rv2067c;protein_id=Rv2067c ### -Chromosome ena gene 2325886 2326809 . - . ID=gene:Rv2068c;Name=blaC;biotype=protein_coding;description=Class a beta-lactamase BlaC;gene_id=Rv2068c;logic_name=ena +Chromosome ena gene 2325886 2326809 . - . ID=gene:Rv2068c;Name=blaC;biotype=protein_coding;description=Class a beta-lactamase BlaC;gene_id=Rv2068c;logic_name=ena Chromosome ena mRNA 2325886 2326809 . - . ID=transcript:Rv2068c;Parent=gene:Rv2068c;Name=blaC-1;biotype=protein_coding;transcript_id=Rv2068c Chromosome ena exon 2325886 2326809 . - . Parent=transcript:Rv2068c;Name=Rv2068c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2068c-1;rank=1 Chromosome ena CDS 2325886 2326809 . - 0 ID=CDS:Rv2068c;Parent=transcript:Rv2068c;protein_id=Rv2068c ### -Chromosome ena gene 2326944 2327501 . + . ID=gene:Rv2069;Name=sigC;biotype=protein_coding;description=RNA polymerase sigma factor%2C ECF subfamily%2C SigC;gene_id=Rv2069;logic_name=ena +Chromosome ena gene 2326944 2327501 . + . ID=gene:Rv2069;Name=sigC;biotype=protein_coding;description=RNA polymerase sigma factor%2C ECF subfamily%2C SigC;gene_id=Rv2069;logic_name=ena Chromosome ena mRNA 2326944 2327501 . + . ID=transcript:Rv2069;Parent=gene:Rv2069;Name=sigC-1;biotype=protein_coding;transcript_id=Rv2069 Chromosome ena exon 2326944 2327501 . + . Parent=transcript:Rv2069;Name=Rv2069-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2069-1;rank=1 Chromosome ena CDS 2326944 2327501 . + 0 ID=CDS:Rv2069;Parent=transcript:Rv2069;protein_id=Rv2069 ### -Chromosome ena gene 2327491 2328225 . - . ID=gene:Rv2070c;Name=cobK;biotype=protein_coding;description=Precorrin-6X reductase CobK;gene_id=Rv2070c;logic_name=ena +Chromosome ena gene 2327491 2328225 . - . ID=gene:Rv2070c;Name=cobK;biotype=protein_coding;description=Precorrin-6X reductase CobK;gene_id=Rv2070c;logic_name=ena Chromosome ena mRNA 2327491 2328225 . - . ID=transcript:Rv2070c;Parent=gene:Rv2070c;Name=cobK-1;biotype=protein_coding;transcript_id=Rv2070c Chromosome ena exon 2327491 2328225 . - . Parent=transcript:Rv2070c;Name=Rv2070c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2070c-1;rank=1 Chromosome ena CDS 2327491 2328225 . - 0 ID=CDS:Rv2070c;Parent=transcript:Rv2070c;protein_id=Rv2070c ### -Chromosome ena gene 2328222 2328977 . - . ID=gene:Rv2071c;Name=cobM;biotype=protein_coding;description=Precorrin-3 methylase CobM (precorrin-4 C11-methyltransferase);gene_id=Rv2071c;logic_name=ena +Chromosome ena gene 2328222 2328977 . - . ID=gene:Rv2071c;Name=cobM;biotype=protein_coding;description=Precorrin-3 methylase CobM (precorrin-4 C11-methyltransferase);gene_id=Rv2071c;logic_name=ena Chromosome ena mRNA 2328222 2328977 . - . ID=transcript:Rv2071c;Parent=gene:Rv2071c;Name=cobM-1;biotype=protein_coding;transcript_id=Rv2071c Chromosome ena exon 2328222 2328977 . - . Parent=transcript:Rv2071c;Name=Rv2071c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2071c-1;rank=1 Chromosome ena CDS 2328222 2328977 . - 0 ID=CDS:Rv2071c;Parent=transcript:Rv2071c;protein_id=Rv2071c ### -Chromosome ena gene 2328974 2330146 . - . ID=gene:Rv2072c;Name=cobL;biotype=protein_coding;description=Precorrin-6Y C(5%2C15)-methyltransferase (decarboxylating) CobL;gene_id=Rv2072c;logic_name=ena +Chromosome ena gene 2328974 2330146 . - . ID=gene:Rv2072c;Name=cobL;biotype=protein_coding;description=Precorrin-6Y C(5%2C15)-methyltransferase (decarboxylating) CobL;gene_id=Rv2072c;logic_name=ena Chromosome ena mRNA 2328974 2330146 . - . ID=transcript:Rv2072c;Parent=gene:Rv2072c;Name=cobL-1;biotype=protein_coding;transcript_id=Rv2072c Chromosome ena exon 2328974 2330146 . - . Parent=transcript:Rv2072c;Name=Rv2072c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2072c-1;rank=1 Chromosome ena CDS 2328974 2330146 . - 0 ID=CDS:Rv2072c;Parent=transcript:Rv2072c;protein_id=Rv2072c ### -Chromosome ena gene 2330214 2330963 . - . ID=gene:Rv2073c;biotype=protein_coding;description=Probable shortchain dehydrogenase;gene_id=Rv2073c;logic_name=ena +Chromosome ena gene 2330214 2330963 . - . ID=gene:Rv2073c;biotype=protein_coding;description=Probable shortchain dehydrogenase;gene_id=Rv2073c;logic_name=ena Chromosome ena mRNA 2330214 2330963 . - . ID=transcript:Rv2073c;Parent=gene:Rv2073c;biotype=protein_coding;transcript_id=Rv2073c Chromosome ena exon 2330214 2330963 . - . Parent=transcript:Rv2073c;Name=Rv2073c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2073c-1;rank=1 Chromosome ena CDS 2330214 2330963 . - 0 ID=CDS:Rv2073c;Parent=transcript:Rv2073c;protein_id=Rv2073c ### -Chromosome ena gene 2330993 2331406 . + . ID=gene:Rv2074;biotype=protein_coding;description=Possible pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv2074;logic_name=ena +Chromosome ena gene 2330993 2331406 . + . ID=gene:Rv2074;biotype=protein_coding;description=Possible pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv2074;logic_name=ena Chromosome ena mRNA 2330993 2331406 . + . ID=transcript:Rv2074;Parent=gene:Rv2074;biotype=protein_coding;transcript_id=Rv2074 Chromosome ena exon 2330993 2331406 . + . Parent=transcript:Rv2074;Name=Rv2074-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2074-1;rank=1 Chromosome ena CDS 2330993 2331406 . + 0 ID=CDS:Rv2074;Parent=transcript:Rv2074;protein_id=Rv2074 ### -Chromosome ena gene 2331416 2332879 . - . ID=gene:Rv2075c;biotype=protein_coding;description=Possible hypothetical exported or envelope protein;gene_id=Rv2075c;logic_name=ena +Chromosome ena gene 2331416 2332879 . - . ID=gene:Rv2075c;biotype=protein_coding;description=Possible hypothetical exported or envelope protein;gene_id=Rv2075c;logic_name=ena Chromosome ena mRNA 2331416 2332879 . - . ID=transcript:Rv2075c;Parent=gene:Rv2075c;biotype=protein_coding;transcript_id=Rv2075c Chromosome ena exon 2331416 2332879 . - . Parent=transcript:Rv2075c;Name=Rv2075c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2075c-1;rank=1 Chromosome ena CDS 2331416 2332879 . - 0 ID=CDS:Rv2075c;Parent=transcript:Rv2075c;protein_id=Rv2075c ### -Chromosome ena gene 2333037 2333288 . - . ID=gene:Rv2076c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2076c;logic_name=ena +Chromosome ena gene 2333037 2333288 . - . ID=gene:Rv2076c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2076c;logic_name=ena Chromosome ena mRNA 2333037 2333288 . - . ID=transcript:Rv2076c;Parent=gene:Rv2076c;biotype=protein_coding;transcript_id=Rv2076c Chromosome ena exon 2333037 2333288 . - . Parent=transcript:Rv2076c;Name=Rv2076c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2076c-1;rank=1 Chromosome ena CDS 2333037 2333288 . - 0 ID=CDS:Rv2076c;Parent=transcript:Rv2076c;protein_id=Rv2076c ### -Chromosome ena gene 2333323 2334294 . - . ID=gene:Rv2077c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2077c;logic_name=ena +Chromosome ena gene 2333323 2334294 . - . ID=gene:Rv2077c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2077c;logic_name=ena Chromosome ena mRNA 2333323 2334294 . - . ID=transcript:Rv2077c;Parent=gene:Rv2077c;biotype=protein_coding;transcript_id=Rv2077c Chromosome ena exon 2333323 2334294 . - . Parent=transcript:Rv2077c;Name=Rv2077c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2077c-1;rank=1 Chromosome ena CDS 2333323 2334294 . - 0 ID=CDS:Rv2077c;Parent=transcript:Rv2077c;protein_id=Rv2077c ### -Chromosome ena gene 2334295 2334594 . - . ID=gene:Rv2077A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2077A;logic_name=ena +Chromosome ena gene 2334295 2334594 . - . ID=gene:Rv2077A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2077A;logic_name=ena Chromosome ena mRNA 2334295 2334594 . - . ID=transcript:Rv2077A;Parent=gene:Rv2077A;biotype=protein_coding;transcript_id=Rv2077A Chromosome ena exon 2334295 2334594 . - . Parent=transcript:Rv2077A;Name=Rv2077A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2077A-1;rank=1 Chromosome ena CDS 2334295 2334594 . - 0 ID=CDS:Rv2077A;Parent=transcript:Rv2077A;protein_id=Rv2077A ### -Chromosome ena gene 2335059 2335373 . + . ID=gene:Rv2078;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2078;logic_name=ena +Chromosome ena gene 2335059 2335373 . + . ID=gene:Rv2078;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2078;logic_name=ena Chromosome ena mRNA 2335059 2335373 . + . ID=transcript:Rv2078;Parent=gene:Rv2078;biotype=protein_coding;transcript_id=Rv2078 Chromosome ena exon 2335059 2335373 . + . Parent=transcript:Rv2078;Name=Rv2078-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2078-1;rank=1 Chromosome ena CDS 2335059 2335373 . + 0 ID=CDS:Rv2078;Parent=transcript:Rv2078;protein_id=Rv2078 ### -Chromosome ena gene 2335355 2337325 . + . ID=gene:Rv2079;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2079;logic_name=ena +Chromosome ena gene 2335355 2337325 . + . ID=gene:Rv2079;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2079;logic_name=ena Chromosome ena mRNA 2335355 2337325 . + . ID=transcript:Rv2079;Parent=gene:Rv2079;biotype=protein_coding;transcript_id=Rv2079 Chromosome ena exon 2335355 2337325 . + . Parent=transcript:Rv2079;Name=Rv2079-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2079-1;rank=1 Chromosome ena CDS 2335355 2337325 . + 0 ID=CDS:Rv2079;Parent=transcript:Rv2079;protein_id=Rv2079 ### -Chromosome ena gene 2337306 2337869 . + . ID=gene:Rv2080;Name=lppJ;biotype=protein_coding;description=Lipoprotein LppJ;gene_id=Rv2080;logic_name=ena +Chromosome ena gene 2337306 2337869 . + . ID=gene:Rv2080;Name=lppJ;biotype=protein_coding;description=Lipoprotein LppJ;gene_id=Rv2080;logic_name=ena Chromosome ena mRNA 2337306 2337869 . + . ID=transcript:Rv2080;Parent=gene:Rv2080;Name=lppJ-1;biotype=protein_coding;transcript_id=Rv2080 Chromosome ena exon 2337306 2337869 . + . Parent=transcript:Rv2080;Name=Rv2080-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2080-1;rank=1 Chromosome ena CDS 2337306 2337869 . + 0 ID=CDS:Rv2080;Parent=transcript:Rv2080;protein_id=Rv2080 ### -Chromosome ena gene 2338065 2338505 . - . ID=gene:Rv2081c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2081c;logic_name=ena +Chromosome ena gene 2338065 2338505 . - . ID=gene:Rv2081c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2081c;logic_name=ena Chromosome ena mRNA 2338065 2338505 . - . ID=transcript:Rv2081c;Parent=gene:Rv2081c;biotype=protein_coding;transcript_id=Rv2081c Chromosome ena exon 2338065 2338505 . - . Parent=transcript:Rv2081c;Name=Rv2081c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2081c-1;rank=1 Chromosome ena CDS 2338065 2338505 . - 0 ID=CDS:Rv2081c;Parent=transcript:Rv2081c;protein_id=Rv2081c ### -Chromosome ena gene 2338709 2340874 . + . ID=gene:Rv2082;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2082;logic_name=ena +Chromosome ena gene 2338709 2340874 . + . ID=gene:Rv2082;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2082;logic_name=ena Chromosome ena mRNA 2338709 2340874 . + . ID=transcript:Rv2082;Parent=gene:Rv2082;biotype=protein_coding;transcript_id=Rv2082 Chromosome ena exon 2338709 2340874 . + . Parent=transcript:Rv2082;Name=Rv2082-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2082-1;rank=1 Chromosome ena CDS 2338709 2340874 . + 0 ID=CDS:Rv2082;Parent=transcript:Rv2082;protein_id=Rv2082 ### -Chromosome ena gene 2340871 2341815 . + . ID=gene:Rv2083;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2083;logic_name=ena +Chromosome ena gene 2340871 2341815 . + . ID=gene:Rv2083;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2083;logic_name=ena Chromosome ena mRNA 2340871 2341815 . + . ID=transcript:Rv2083;Parent=gene:Rv2083;biotype=protein_coding;transcript_id=Rv2083 Chromosome ena exon 2340871 2341815 . + . Parent=transcript:Rv2083;Name=Rv2083-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2083-1;rank=1 Chromosome ena CDS 2340871 2341815 . + 0 ID=CDS:Rv2083;Parent=transcript:Rv2083;protein_id=Rv2083 ### -Chromosome ena gene 2341808 2342944 . + . ID=gene:Rv2084;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2084;logic_name=ena +Chromosome ena gene 2341808 2342944 . + . ID=gene:Rv2084;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2084;logic_name=ena Chromosome ena mRNA 2341808 2342944 . + . ID=transcript:Rv2084;Parent=gene:Rv2084;biotype=protein_coding;transcript_id=Rv2084 Chromosome ena exon 2341808 2342944 . + . Parent=transcript:Rv2084;Name=Rv2084-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2084-1;rank=1 Chromosome ena CDS 2341808 2342944 . + 0 ID=CDS:Rv2084;Parent=transcript:Rv2084;protein_id=Rv2084 ### -Chromosome ena_mobile_element biological_region 2342942 2344410 . + . external_name=IS1556%2C len: 1469 nt. Possible Insertion sequence-like region. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element -Chromosome ena gene 2343027 2343332 . + . ID=gene:Rv2085;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2085;logic_name=ena +Chromosome ena_mobile_element biological_region 2342942 2344410 . + . external_name=IS1556%2C len: 1469 nt. Possible Insertion sequence-like region. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element +Chromosome ena gene 2343027 2343332 . + . ID=gene:Rv2085;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2085;logic_name=ena Chromosome ena mRNA 2343027 2343332 . + . ID=transcript:Rv2085;Parent=gene:Rv2085;biotype=protein_coding;transcript_id=Rv2085 Chromosome ena exon 2343027 2343332 . + . Parent=transcript:Rv2085;Name=Rv2085-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2085-1;rank=1 Chromosome ena CDS 2343027 2343332 . + 0 ID=CDS:Rv2085;Parent=transcript:Rv2085;protein_id=Rv2085 ### -Chromosome ena gene 2343311 2343916 . + . ID=gene:Rv2086;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2086;logic_name=ena +Chromosome ena gene 2343311 2343916 . + . ID=gene:Rv2086;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2086;logic_name=ena Chromosome ena mRNA 2343311 2343916 . + . ID=transcript:Rv2086;Parent=gene:Rv2086;biotype=protein_coding;transcript_id=Rv2086 Chromosome ena exon 2343311 2343916 . + . Parent=transcript:Rv2086;Name=Rv2086-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2086-1;rank=1 Chromosome ena CDS 2343311 2343916 . + 0 ID=CDS:Rv2086;Parent=transcript:Rv2086;protein_id=Rv2086 ### -Chromosome ena gene 2343994 2344224 . + . ID=gene:Rv2087;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2087;logic_name=ena +Chromosome ena gene 2343994 2344224 . + . ID=gene:Rv2087;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2087;logic_name=ena Chromosome ena mRNA 2343994 2344224 . + . ID=transcript:Rv2087;Parent=gene:Rv2087;biotype=protein_coding;transcript_id=Rv2087 Chromosome ena exon 2343994 2344224 . + . Parent=transcript:Rv2087;Name=Rv2087-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2087-1;rank=1 Chromosome ena CDS 2343994 2344224 . + 0 ID=CDS:Rv2087;Parent=transcript:Rv2087;protein_id=Rv2087 ### -Chromosome ena gene 2344411 2346180 . + . ID=gene:Rv2088;Name=pknJ;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase J PknJ (protein kinase J) (STPK J);gene_id=Rv2088;logic_name=ena +Chromosome ena gene 2344411 2346180 . + . ID=gene:Rv2088;Name=pknJ;biotype=protein_coding;description=Transmembrane serine/threonine-protein kinase J PknJ (protein kinase J) (STPK J);gene_id=Rv2088;logic_name=ena Chromosome ena mRNA 2344411 2346180 . + . ID=transcript:Rv2088;Parent=gene:Rv2088;Name=pknJ-1;biotype=protein_coding;transcript_id=Rv2088 Chromosome ena exon 2344411 2346180 . + . Parent=transcript:Rv2088;Name=Rv2088-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2088-1;rank=1 Chromosome ena CDS 2344411 2346180 . + 0 ID=CDS:Rv2088;Parent=transcript:Rv2088;protein_id=Rv2088 ### -Chromosome ena gene 2346197 2347324 . - . ID=gene:Rv2089c;Name=pepE;biotype=protein_coding;description=Dipeptidase PepE;gene_id=Rv2089c;logic_name=ena +Chromosome ena gene 2346197 2347324 . - . ID=gene:Rv2089c;Name=pepE;biotype=protein_coding;description=Dipeptidase PepE;gene_id=Rv2089c;logic_name=ena Chromosome ena mRNA 2346197 2347324 . - . ID=transcript:Rv2089c;Parent=gene:Rv2089c;Name=pepE-1;biotype=protein_coding;transcript_id=Rv2089c Chromosome ena exon 2346197 2347324 . - . Parent=transcript:Rv2089c;Name=Rv2089c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2089c-1;rank=1 Chromosome ena CDS 2346197 2347324 . - 0 ID=CDS:Rv2089c;Parent=transcript:Rv2089c;protein_id=Rv2089c ### -Chromosome ena gene 2347373 2348554 . + . ID=gene:Rv2090;biotype=protein_coding;description=Probable 5'-3' exonuclease;gene_id=Rv2090;logic_name=ena +Chromosome ena gene 2347373 2348554 . + . ID=gene:Rv2090;biotype=protein_coding;description=Probable 5'-3' exonuclease;gene_id=Rv2090;logic_name=ena Chromosome ena mRNA 2347373 2348554 . + . ID=transcript:Rv2090;Parent=gene:Rv2090;biotype=protein_coding;transcript_id=Rv2090 Chromosome ena exon 2347373 2348554 . + . Parent=transcript:Rv2090;Name=Rv2090-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2090-1;rank=1 Chromosome ena CDS 2347373 2348554 . + 0 ID=CDS:Rv2090;Parent=transcript:Rv2090;protein_id=Rv2090 ### -Chromosome ena gene 2348558 2349292 . - . ID=gene:Rv2091c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2091c;logic_name=ena +Chromosome ena gene 2348558 2349292 . - . ID=gene:Rv2091c;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2091c;logic_name=ena Chromosome ena mRNA 2348558 2349292 . - . ID=transcript:Rv2091c;Parent=gene:Rv2091c;biotype=protein_coding;transcript_id=Rv2091c Chromosome ena exon 2348558 2349292 . - . Parent=transcript:Rv2091c;Name=Rv2091c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2091c-1;rank=1 Chromosome ena CDS 2348558 2349292 . - 0 ID=CDS:Rv2091c;Parent=transcript:Rv2091c;protein_id=Rv2091c ### -Chromosome ena gene 2349334 2352054 . - . ID=gene:Rv2092c;Name=helY;biotype=protein_coding;description=ATP-dependent DNA helicase HelY;gene_id=Rv2092c;logic_name=ena +Chromosome ena gene 2349334 2352054 . - . ID=gene:Rv2092c;Name=helY;biotype=protein_coding;description=ATP-dependent DNA helicase HelY;gene_id=Rv2092c;logic_name=ena Chromosome ena mRNA 2349334 2352054 . - . ID=transcript:Rv2092c;Parent=gene:Rv2092c;Name=helY-1;biotype=protein_coding;transcript_id=Rv2092c Chromosome ena exon 2349334 2352054 . - . Parent=transcript:Rv2092c;Name=Rv2092c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2092c-1;rank=1 Chromosome ena CDS 2349334 2352054 . - 0 ID=CDS:Rv2092c;Parent=transcript:Rv2092c;protein_id=Rv2092c ### -Chromosome ena gene 2352103 2353029 . - . ID=gene:Rv2093c;Name=tatC;biotype=protein_coding;description=Sec-independent protein translocase transmembrane protein TatC;gene_id=Rv2093c;logic_name=ena +Chromosome ena gene 2352103 2353029 . - . ID=gene:Rv2093c;Name=tatC;biotype=protein_coding;description=Sec-independent protein translocase transmembrane protein TatC;gene_id=Rv2093c;logic_name=ena Chromosome ena mRNA 2352103 2353029 . - . ID=transcript:Rv2093c;Parent=gene:Rv2093c;Name=tatC-1;biotype=protein_coding;transcript_id=Rv2093c Chromosome ena exon 2352103 2353029 . - . Parent=transcript:Rv2093c;Name=Rv2093c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2093c-1;rank=1 Chromosome ena CDS 2352103 2353029 . - 0 ID=CDS:Rv2093c;Parent=transcript:Rv2093c;protein_id=Rv2093c ### -Chromosome ena gene 2353046 2353297 . - . ID=gene:Rv2094c;Name=tatA;biotype=protein_coding;description=Sec-independent protein translocase membrane-bound protein TatA;gene_id=Rv2094c;logic_name=ena +Chromosome ena gene 2353046 2353297 . - . ID=gene:Rv2094c;Name=tatA;biotype=protein_coding;description=Sec-independent protein translocase membrane-bound protein TatA;gene_id=Rv2094c;logic_name=ena Chromosome ena mRNA 2353046 2353297 . - . ID=transcript:Rv2094c;Parent=gene:Rv2094c;Name=tatA-1;biotype=protein_coding;transcript_id=Rv2094c Chromosome ena exon 2353046 2353297 . - . Parent=transcript:Rv2094c;Name=Rv2094c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2094c-1;rank=1 Chromosome ena CDS 2353046 2353297 . - 0 ID=CDS:Rv2094c;Parent=transcript:Rv2094c;protein_id=Rv2094c ### -Chromosome ena gene 2353365 2354315 . - . ID=gene:Rv2095c;Name=pafC;biotype=protein_coding;description=Proteasome accessory factor C PafC;gene_id=Rv2095c;logic_name=ena +Chromosome ena gene 2353365 2354315 . - . ID=gene:Rv2095c;Name=pafC;biotype=protein_coding;description=Proteasome accessory factor C PafC;gene_id=Rv2095c;logic_name=ena Chromosome ena mRNA 2353365 2354315 . - . ID=transcript:Rv2095c;Parent=gene:Rv2095c;Name=pafC-1;biotype=protein_coding;transcript_id=Rv2095c Chromosome ena exon 2353365 2354315 . - . Parent=transcript:Rv2095c;Name=Rv2095c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2095c-1;rank=1 Chromosome ena CDS 2353365 2354315 . - 0 ID=CDS:Rv2095c;Parent=transcript:Rv2095c;protein_id=Rv2095c ### -Chromosome ena gene 2354312 2355310 . - . ID=gene:Rv2096c;Name=pafB;biotype=protein_coding;description=Proteasome accessory factor B PafB;gene_id=Rv2096c;logic_name=ena +Chromosome ena gene 2354312 2355310 . - . ID=gene:Rv2096c;Name=pafB;biotype=protein_coding;description=Proteasome accessory factor B PafB;gene_id=Rv2096c;logic_name=ena Chromosome ena mRNA 2354312 2355310 . - . ID=transcript:Rv2096c;Parent=gene:Rv2096c;Name=pafB-1;biotype=protein_coding;transcript_id=Rv2096c Chromosome ena exon 2354312 2355310 . - . Parent=transcript:Rv2096c;Name=Rv2096c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2096c-1;rank=1 Chromosome ena CDS 2354312 2355310 . - 0 ID=CDS:Rv2096c;Parent=transcript:Rv2096c;protein_id=Rv2096c ### -Chromosome ena gene 2355319 2356677 . - . ID=gene:Rv2097c;Name=pafA;biotype=protein_coding;description=Proteasome accessory factor a PafA;gene_id=Rv2097c;logic_name=ena +Chromosome ena gene 2355319 2356677 . - . ID=gene:Rv2097c;Name=pafA;biotype=protein_coding;description=Proteasome accessory factor a PafA;gene_id=Rv2097c;logic_name=ena Chromosome ena mRNA 2355319 2356677 . - . ID=transcript:Rv2097c;Parent=gene:Rv2097c;Name=pafA-1;biotype=protein_coding;transcript_id=Rv2097c Chromosome ena exon 2355319 2356677 . - . Parent=transcript:Rv2097c;Name=Rv2097c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2097c-1;rank=1 Chromosome ena CDS 2355319 2356677 . - 0 ID=CDS:Rv2097c;Parent=transcript:Rv2097c;protein_id=Rv2097c ### -Chromosome ena pseudogene 2356729 2358033 . - . ID=gene:Rv2098c;Name=PE_PGRS36;biotype=pseudogene;description=PE-PGRS family protein PE_PGRS36;gene_id=Rv2098c;logic_name=ena +Chromosome ena pseudogene 2356729 2358033 . - . ID=gene:Rv2098c;Name=PE_PGRS36;biotype=pseudogene;description=PE-PGRS family protein PE_PGRS36;gene_id=Rv2098c;logic_name=ena Chromosome ena pseudogene 2356729 2358033 . - . ID=transcript:Rv2098c;Parent=gene:Rv2098c;Name=PE_PGRS36-1;biotype=pseudogene;transcript_id=Rv2098c Chromosome ena exon 2356729 2358033 . - . Parent=transcript:Rv2098c;Name=Rv2098c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2098c-1;rank=1 ### -Chromosome ena pseudogene 2358033 2358206 . - . ID=gene:Rv2099c;Name=PE21;biotype=pseudogene;description=PE family protein PE21;gene_id=Rv2099c;logic_name=ena +Chromosome ena pseudogene 2358033 2358206 . - . ID=gene:Rv2099c;Name=PE21;biotype=pseudogene;description=PE family protein PE21;gene_id=Rv2099c;logic_name=ena Chromosome ena pseudogene 2358033 2358206 . - . ID=transcript:Rv2099c;Parent=gene:Rv2099c;Name=PE21-1;biotype=pseudogene;transcript_id=Rv2099c Chromosome ena exon 2358033 2358206 . - . Parent=transcript:Rv2099c;Name=Rv2099c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2099c-1;rank=1 ### -Chromosome ena gene 2358389 2360041 . + . ID=gene:Rv2100;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2100;logic_name=ena +Chromosome ena gene 2358389 2360041 . + . ID=gene:Rv2100;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2100;logic_name=ena Chromosome ena mRNA 2358389 2360041 . + . ID=transcript:Rv2100;Parent=gene:Rv2100;biotype=protein_coding;transcript_id=Rv2100 Chromosome ena exon 2358389 2360041 . + . Parent=transcript:Rv2100;Name=Rv2100-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2100-1;rank=1 Chromosome ena CDS 2358389 2360041 . + 0 ID=CDS:Rv2100;Parent=transcript:Rv2100;protein_id=Rv2100 ### -Chromosome ena gene 2360240 2363281 . + . ID=gene:Rv2101;Name=helZ;biotype=protein_coding;description=Probable helicase HelZ;gene_id=Rv2101;logic_name=ena +Chromosome ena gene 2360240 2363281 . + . ID=gene:Rv2101;Name=helZ;biotype=protein_coding;description=Probable helicase HelZ;gene_id=Rv2101;logic_name=ena Chromosome ena mRNA 2360240 2363281 . + . ID=transcript:Rv2101;Parent=gene:Rv2101;Name=helZ-1;biotype=protein_coding;transcript_id=Rv2101 Chromosome ena exon 2360240 2363281 . + . Parent=transcript:Rv2101;Name=Rv2101-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2101-1;rank=1 Chromosome ena CDS 2360240 2363281 . + 0 ID=CDS:Rv2101;Parent=transcript:Rv2101;protein_id=Rv2101 ### -Chromosome ena gene 2363391 2364107 . + . ID=gene:Rv2102;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2102;logic_name=ena +Chromosome ena gene 2363391 2364107 . + . ID=gene:Rv2102;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2102;logic_name=ena Chromosome ena mRNA 2363391 2364107 . + . ID=transcript:Rv2102;Parent=gene:Rv2102;biotype=protein_coding;transcript_id=Rv2102 Chromosome ena exon 2363391 2364107 . + . Parent=transcript:Rv2102;Name=Rv2102-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2102-1;rank=1 Chromosome ena CDS 2363391 2364107 . + 0 ID=CDS:Rv2102;Parent=transcript:Rv2102;protein_id=Rv2102 ### -Chromosome ena gene 2364086 2364520 . - . ID=gene:Rv2103c;Name=vapC37;biotype=protein_coding;description=Possible toxin VapC37. Contains PIN domain.;gene_id=Rv2103c;logic_name=ena +Chromosome ena gene 2364086 2364520 . - . ID=gene:Rv2103c;Name=vapC37;biotype=protein_coding;description=Possible toxin VapC37. Contains PIN domain.;gene_id=Rv2103c;logic_name=ena Chromosome ena mRNA 2364086 2364520 . - . ID=transcript:Rv2103c;Parent=gene:Rv2103c;Name=vapC37-1;biotype=protein_coding;transcript_id=Rv2103c Chromosome ena exon 2364086 2364520 . - . Parent=transcript:Rv2103c;Name=Rv2103c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2103c-1;rank=1 Chromosome ena CDS 2364086 2364520 . - 0 ID=CDS:Rv2103c;Parent=transcript:Rv2103c;protein_id=Rv2103c ### -Chromosome ena gene 2364527 2364781 . - . ID=gene:Rv2104c;Name=vapB37;biotype=protein_coding;description=Possible antitoxin VapB37;gene_id=Rv2104c;logic_name=ena +Chromosome ena gene 2364527 2364781 . - . ID=gene:Rv2104c;Name=vapB37;biotype=protein_coding;description=Possible antitoxin VapB37;gene_id=Rv2104c;logic_name=ena Chromosome ena mRNA 2364527 2364781 . - . ID=transcript:Rv2104c;Parent=gene:Rv2104c;Name=vapB37-1;biotype=protein_coding;transcript_id=Rv2104c Chromosome ena exon 2364527 2364781 . - . Parent=transcript:Rv2104c;Name=Rv2104c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2104c-1;rank=1 Chromosome ena CDS 2364527 2364781 . - 0 ID=CDS:Rv2104c;Parent=transcript:Rv2104c;protein_id=Rv2104c ### -Chromosome ena_mobile_element biological_region 2365414 2366768 . + . external_name=IS6110-5%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 2365465 2365791 . + . ID=gene:Rv2105;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2105;logic_name=ena +Chromosome ena_mobile_element biological_region 2365414 2366768 . + . external_name=IS6110-5%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 2365465 2365791 . + . ID=gene:Rv2105;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2105;logic_name=ena Chromosome ena mRNA 2365465 2365791 . + . ID=transcript:Rv2105;Parent=gene:Rv2105;biotype=protein_coding;transcript_id=Rv2105 Chromosome ena exon 2365465 2365791 . + . Parent=transcript:Rv2105;Name=Rv2105-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2105-1;rank=1 Chromosome ena CDS 2365465 2365791 . + 0 ID=CDS:Rv2105;Parent=transcript:Rv2105;protein_id=Rv2105 ### -Chromosome ena gene 2365740 2366726 . + . ID=gene:Rv2106;biotype=protein_coding;description=Probable transposase;gene_id=Rv2106;logic_name=ena +Chromosome ena gene 2365740 2366726 . + . ID=gene:Rv2106;biotype=protein_coding;description=Probable transposase;gene_id=Rv2106;logic_name=ena Chromosome ena mRNA 2365740 2366726 . + . ID=transcript:Rv2106;Parent=gene:Rv2106;biotype=protein_coding;transcript_id=Rv2106 Chromosome ena exon 2365740 2366726 . + . Parent=transcript:Rv2106;Name=Rv2106-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2106-1;rank=1 Chromosome ena CDS 2365740 2366726 . + 0 ID=CDS:Rv2106;Parent=transcript:Rv2106;protein_id=Rv2106 ### -Chromosome ena gene 2367359 2367655 . + . ID=gene:Rv2107;Name=PE22;biotype=protein_coding;description=PE family protein PE22;gene_id=Rv2107;logic_name=ena +Chromosome ena gene 2367359 2367655 . + . ID=gene:Rv2107;Name=PE22;biotype=protein_coding;description=PE family protein PE22;gene_id=Rv2107;logic_name=ena Chromosome ena mRNA 2367359 2367655 . + . ID=transcript:Rv2107;Parent=gene:Rv2107;Name=PE22-1;biotype=protein_coding;transcript_id=Rv2107 Chromosome ena exon 2367359 2367655 . + . Parent=transcript:Rv2107;Name=Rv2107-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2107-1;rank=1 Chromosome ena CDS 2367359 2367655 . + 0 ID=CDS:Rv2107;Parent=transcript:Rv2107;protein_id=Rv2107 ### -Chromosome ena gene 2367711 2368442 . + . ID=gene:Rv2108;Name=PPE36;biotype=protein_coding;description=PPE family protein PPE36;gene_id=Rv2108;logic_name=ena +Chromosome ena gene 2367711 2368442 . + . ID=gene:Rv2108;Name=PPE36;biotype=protein_coding;description=PPE family protein PPE36;gene_id=Rv2108;logic_name=ena Chromosome ena mRNA 2367711 2368442 . + . ID=transcript:Rv2108;Parent=gene:Rv2108;Name=PPE36-1;biotype=protein_coding;transcript_id=Rv2108 Chromosome ena exon 2367711 2368442 . + . Parent=transcript:Rv2108;Name=Rv2108-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2108-1;rank=1 Chromosome ena CDS 2367711 2368442 . + 0 ID=CDS:Rv2108;Parent=transcript:Rv2108;protein_id=Rv2108 ### -Chromosome ena gene 2368983 2369729 . - . ID=gene:Rv2109c;Name=prcA;biotype=protein_coding;description=Proteasome alpha subunit PrcA%3B assembles with beta subunit PrcB.;gene_id=Rv2109c;logic_name=ena +Chromosome ena gene 2368983 2369729 . - . ID=gene:Rv2109c;Name=prcA;biotype=protein_coding;description=Proteasome alpha subunit PrcA%3B assembles with beta subunit PrcB.;gene_id=Rv2109c;logic_name=ena Chromosome ena mRNA 2368983 2369729 . - . ID=transcript:Rv2109c;Parent=gene:Rv2109c;Name=prcA-1;biotype=protein_coding;transcript_id=Rv2109c Chromosome ena exon 2368983 2369729 . - . Parent=transcript:Rv2109c;Name=Rv2109c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2109c-1;rank=1 Chromosome ena CDS 2368983 2369729 . - 0 ID=CDS:Rv2109c;Parent=transcript:Rv2109c;protein_id=Rv2109c ### -Chromosome ena gene 2369726 2370601 . - . ID=gene:Rv2110c;Name=prcB;biotype=protein_coding;description=Proteasome beta subunit PrcB%3B assembles with alpha subunit PrcA.;gene_id=Rv2110c;logic_name=ena +Chromosome ena gene 2369726 2370601 . - . ID=gene:Rv2110c;Name=prcB;biotype=protein_coding;description=Proteasome beta subunit PrcB%3B assembles with alpha subunit PrcA.;gene_id=Rv2110c;logic_name=ena Chromosome ena mRNA 2369726 2370601 . - . ID=transcript:Rv2110c;Parent=gene:Rv2110c;Name=prcB-1;biotype=protein_coding;transcript_id=Rv2110c Chromosome ena exon 2369726 2370601 . - . Parent=transcript:Rv2110c;Name=Rv2110c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2110c-1;rank=1 Chromosome ena CDS 2369726 2370601 . - 0 ID=CDS:Rv2110c;Parent=transcript:Rv2110c;protein_id=Rv2110c ### -Chromosome ena gene 2370598 2370792 . - . ID=gene:Rv2111c;Name=pup;biotype=protein_coding;description=Prokaryotic ubiquitin-like protein Pup;gene_id=Rv2111c;logic_name=ena +Chromosome ena gene 2370598 2370792 . - . ID=gene:Rv2111c;Name=pup;biotype=protein_coding;description=Prokaryotic ubiquitin-like protein Pup;gene_id=Rv2111c;logic_name=ena Chromosome ena mRNA 2370598 2370792 . - . ID=transcript:Rv2111c;Parent=gene:Rv2111c;Name=pup-1;biotype=protein_coding;transcript_id=Rv2111c Chromosome ena exon 2370598 2370792 . - . Parent=transcript:Rv2111c;Name=Rv2111c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2111c-1;rank=1 Chromosome ena CDS 2370598 2370792 . - 0 ID=CDS:Rv2111c;Parent=transcript:Rv2111c;protein_id=Rv2111c ### -Chromosome ena gene 2370905 2372569 . - . ID=gene:Rv2112c;Name=dop;biotype=protein_coding;description=Deamidase of pup Dop;gene_id=Rv2112c;logic_name=ena +Chromosome ena gene 2370905 2372569 . - . ID=gene:Rv2112c;Name=dop;biotype=protein_coding;description=Deamidase of pup Dop;gene_id=Rv2112c;logic_name=ena Chromosome ena mRNA 2370905 2372569 . - . ID=transcript:Rv2112c;Parent=gene:Rv2112c;Name=dop-1;biotype=protein_coding;transcript_id=Rv2112c Chromosome ena exon 2370905 2372569 . - . Parent=transcript:Rv2112c;Name=Rv2112c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2112c-1;rank=1 Chromosome ena CDS 2370905 2372569 . - 0 ID=CDS:Rv2112c;Parent=transcript:Rv2112c;protein_id=Rv2112c ### -Chromosome ena gene 2372630 2373823 . + . ID=gene:Rv2113;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2113;logic_name=ena +Chromosome ena gene 2372630 2373823 . + . ID=gene:Rv2113;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2113;logic_name=ena Chromosome ena mRNA 2372630 2373823 . + . ID=transcript:Rv2113;Parent=gene:Rv2113;biotype=protein_coding;transcript_id=Rv2113 Chromosome ena exon 2372630 2373823 . + . Parent=transcript:Rv2113;Name=Rv2113-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2113-1;rank=1 Chromosome ena CDS 2372630 2373823 . + 0 ID=CDS:Rv2113;Parent=transcript:Rv2113;protein_id=Rv2113 ### -Chromosome ena gene 2373834 2374457 . + . ID=gene:Rv2114;biotype=protein_coding;description=Conserved protein;gene_id=Rv2114;logic_name=ena +Chromosome ena gene 2373834 2374457 . + . ID=gene:Rv2114;biotype=protein_coding;description=Conserved protein;gene_id=Rv2114;logic_name=ena Chromosome ena mRNA 2373834 2374457 . + . ID=transcript:Rv2114;Parent=gene:Rv2114;biotype=protein_coding;transcript_id=Rv2114 Chromosome ena exon 2373834 2374457 . + . Parent=transcript:Rv2114;Name=Rv2114-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2114-1;rank=1 Chromosome ena CDS 2373834 2374457 . + 0 ID=CDS:Rv2114;Parent=transcript:Rv2114;protein_id=Rv2114 ### -Chromosome ena gene 2374461 2376290 . - . ID=gene:Rv2115c;Name=mpa;biotype=protein_coding;description=Mycobacterial proteasome ATPase Mpa;gene_id=Rv2115c;logic_name=ena +Chromosome ena gene 2374461 2376290 . - . ID=gene:Rv2115c;Name=mpa;biotype=protein_coding;description=Mycobacterial proteasome ATPase Mpa;gene_id=Rv2115c;logic_name=ena Chromosome ena mRNA 2374461 2376290 . - . ID=transcript:Rv2115c;Parent=gene:Rv2115c;Name=mpa-1;biotype=protein_coding;transcript_id=Rv2115c Chromosome ena exon 2374461 2376290 . - . Parent=transcript:Rv2115c;Name=Rv2115c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2115c-1;rank=1 Chromosome ena CDS 2374461 2376290 . - 0 ID=CDS:Rv2115c;Parent=transcript:Rv2115c;protein_id=Rv2115c ### -Chromosome ena gene 2376571 2377140 . + . ID=gene:Rv2116;Name=lppK;biotype=protein_coding;description=Conserved lipoprotein LppK;gene_id=Rv2116;logic_name=ena +Chromosome ena gene 2376571 2377140 . + . ID=gene:Rv2116;Name=lppK;biotype=protein_coding;description=Conserved lipoprotein LppK;gene_id=Rv2116;logic_name=ena Chromosome ena mRNA 2376571 2377140 . + . ID=transcript:Rv2116;Parent=gene:Rv2116;Name=lppK-1;biotype=protein_coding;transcript_id=Rv2116 Chromosome ena exon 2376571 2377140 . + . Parent=transcript:Rv2116;Name=Rv2116-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2116-1;rank=1 Chromosome ena CDS 2376571 2377140 . + 0 ID=CDS:Rv2116;Parent=transcript:Rv2116;protein_id=Rv2116 ### -Chromosome ena gene 2377148 2377441 . + . ID=gene:Rv2117;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2117;logic_name=ena +Chromosome ena gene 2377148 2377441 . + . ID=gene:Rv2117;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2117;logic_name=ena Chromosome ena mRNA 2377148 2377441 . + . ID=transcript:Rv2117;Parent=gene:Rv2117;biotype=protein_coding;transcript_id=Rv2117 Chromosome ena exon 2377148 2377441 . + . Parent=transcript:Rv2117;Name=Rv2117-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2117-1;rank=1 Chromosome ena CDS 2377148 2377441 . + 0 ID=CDS:Rv2117;Parent=transcript:Rv2117;protein_id=Rv2117 ### -Chromosome ena gene 2377470 2378312 . - . ID=gene:Rv2118c;biotype=protein_coding;description=RNA methyltransferase;gene_id=Rv2118c;logic_name=ena +Chromosome ena gene 2377470 2378312 . - . ID=gene:Rv2118c;biotype=protein_coding;description=RNA methyltransferase;gene_id=Rv2118c;logic_name=ena Chromosome ena mRNA 2377470 2378312 . - . ID=transcript:Rv2118c;Parent=gene:Rv2118c;biotype=protein_coding;transcript_id=Rv2118c Chromosome ena exon 2377470 2378312 . - . Parent=transcript:Rv2118c;Name=Rv2118c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2118c-1;rank=1 Chromosome ena CDS 2377470 2378312 . - 0 ID=CDS:Rv2118c;Parent=transcript:Rv2118c;protein_id=Rv2118c ### -Chromosome ena gene 2378386 2379222 . + . ID=gene:Rv2119;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2119;logic_name=ena +Chromosome ena gene 2378386 2379222 . + . ID=gene:Rv2119;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2119;logic_name=ena Chromosome ena mRNA 2378386 2379222 . + . ID=transcript:Rv2119;Parent=gene:Rv2119;biotype=protein_coding;transcript_id=Rv2119 Chromosome ena exon 2378386 2379222 . + . Parent=transcript:Rv2119;Name=Rv2119-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2119-1;rank=1 Chromosome ena CDS 2378386 2379222 . + 0 ID=CDS:Rv2119;Parent=transcript:Rv2119;protein_id=Rv2119 ### -Chromosome ena gene 2379245 2379727 . - . ID=gene:Rv2120c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2120c;logic_name=ena +Chromosome ena gene 2379245 2379727 . - . ID=gene:Rv2120c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2120c;logic_name=ena Chromosome ena mRNA 2379245 2379727 . - . ID=transcript:Rv2120c;Parent=gene:Rv2120c;biotype=protein_coding;transcript_id=Rv2120c Chromosome ena exon 2379245 2379727 . - . Parent=transcript:Rv2120c;Name=Rv2120c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2120c-1;rank=1 Chromosome ena CDS 2379245 2379727 . - 0 ID=CDS:Rv2120c;Parent=transcript:Rv2120c;protein_id=Rv2120c ### -Chromosome ena gene 2379806 2380660 . - . ID=gene:Rv2121c;Name=hisG;biotype=protein_coding;description=ATP phosphoribosyltransferase HisG;gene_id=Rv2121c;logic_name=ena +Chromosome ena gene 2379806 2380660 . - . ID=gene:Rv2121c;Name=hisG;biotype=protein_coding;description=ATP phosphoribosyltransferase HisG;gene_id=Rv2121c;logic_name=ena Chromosome ena mRNA 2379806 2380660 . - . ID=transcript:Rv2121c;Parent=gene:Rv2121c;Name=hisG-1;biotype=protein_coding;transcript_id=Rv2121c Chromosome ena exon 2379806 2380660 . - . Parent=transcript:Rv2121c;Name=Rv2121c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2121c-1;rank=1 Chromosome ena CDS 2379806 2380660 . - 0 ID=CDS:Rv2121c;Parent=transcript:Rv2121c;protein_id=Rv2121c ### -Chromosome ena gene 2380663 2380944 . - . ID=gene:Rv2122c;Name=hisE;biotype=protein_coding;description=Phosphoribosyl-AMP pyrophosphatase HisE;gene_id=Rv2122c;logic_name=ena +Chromosome ena gene 2380663 2380944 . - . ID=gene:Rv2122c;Name=hisE;biotype=protein_coding;description=Phosphoribosyl-AMP pyrophosphatase HisE;gene_id=Rv2122c;logic_name=ena Chromosome ena mRNA 2380663 2380944 . - . ID=transcript:Rv2122c;Parent=gene:Rv2122c;Name=hisE-1;biotype=protein_coding;transcript_id=Rv2122c Chromosome ena exon 2380663 2380944 . - . Parent=transcript:Rv2122c;Name=Rv2122c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2122c-1;rank=1 Chromosome ena CDS 2380663 2380944 . - 0 ID=CDS:Rv2122c;Parent=transcript:Rv2122c;protein_id=Rv2122c ### -Chromosome ena gene 2381071 2382492 . + . ID=gene:Rv2123;Name=PPE37;biotype=protein_coding;description=PPE family protein PPE37;gene_id=Rv2123;logic_name=ena +Chromosome ena gene 2381071 2382492 . + . ID=gene:Rv2123;Name=PPE37;biotype=protein_coding;description=PPE family protein PPE37;gene_id=Rv2123;logic_name=ena Chromosome ena mRNA 2381071 2382492 . + . ID=transcript:Rv2123;Parent=gene:Rv2123;Name=PPE37-1;biotype=protein_coding;transcript_id=Rv2123 Chromosome ena exon 2381071 2382492 . + . Parent=transcript:Rv2123;Name=Rv2123-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2123-1;rank=1 Chromosome ena CDS 2381071 2382492 . + 0 ID=CDS:Rv2123;Parent=transcript:Rv2123;protein_id=Rv2123 ### -Chromosome ena gene 2382489 2386067 . - . ID=gene:Rv2124c;Name=metH;biotype=protein_coding;description=5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase%2C vitamin-B12 dependent isozyme) (ms);gene_id=Rv2124c;logic_name=ena +Chromosome ena gene 2382489 2386067 . - . ID=gene:Rv2124c;Name=metH;biotype=protein_coding;description=5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase%2C vitamin-B12 dependent isozyme) (ms);gene_id=Rv2124c;logic_name=ena Chromosome ena mRNA 2382489 2386067 . - . ID=transcript:Rv2124c;Parent=gene:Rv2124c;Name=metH-1;biotype=protein_coding;transcript_id=Rv2124c Chromosome ena exon 2382489 2386067 . - . Parent=transcript:Rv2124c;Name=Rv2124c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2124c-1;rank=1 Chromosome ena CDS 2382489 2386067 . - 0 ID=CDS:Rv2124c;Parent=transcript:Rv2124c;protein_id=Rv2124c ### -Chromosome ena gene 2386293 2387171 . + . ID=gene:Rv2125;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2125;logic_name=ena +Chromosome ena gene 2386293 2387171 . + . ID=gene:Rv2125;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2125;logic_name=ena Chromosome ena mRNA 2386293 2387171 . + . ID=transcript:Rv2125;Parent=gene:Rv2125;biotype=protein_coding;transcript_id=Rv2125 Chromosome ena exon 2386293 2387171 . + . Parent=transcript:Rv2125;Name=Rv2125-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2125-1;rank=1 Chromosome ena CDS 2386293 2387171 . + 0 ID=CDS:Rv2125;Parent=transcript:Rv2125;protein_id=Rv2125 ### -Chromosome ena gene 2387202 2387972 . - . ID=gene:Rv2126c;Name=PE_PGRS37;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS37;gene_id=Rv2126c;logic_name=ena +Chromosome ena gene 2387202 2387972 . - . ID=gene:Rv2126c;Name=PE_PGRS37;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS37;gene_id=Rv2126c;logic_name=ena Chromosome ena mRNA 2387202 2387972 . - . ID=transcript:Rv2126c;Parent=gene:Rv2126c;Name=PE_PGRS37-1;biotype=protein_coding;transcript_id=Rv2126c Chromosome ena exon 2387202 2387972 . - . Parent=transcript:Rv2126c;Name=Rv2126c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2126c-1;rank=1 Chromosome ena CDS 2387202 2387972 . - 0 ID=CDS:Rv2126c;Parent=transcript:Rv2126c;protein_id=Rv2126c ### -Chromosome ena gene 2388616 2390085 . + . ID=gene:Rv2127;Name=ansP1;biotype=protein_coding;description=L-asparagine permease AnsP1;gene_id=Rv2127;logic_name=ena +Chromosome ena gene 2388616 2390085 . + . ID=gene:Rv2127;Name=ansP1;biotype=protein_coding;description=L-asparagine permease AnsP1;gene_id=Rv2127;logic_name=ena Chromosome ena mRNA 2388616 2390085 . + . ID=transcript:Rv2127;Parent=gene:Rv2127;Name=ansP1-1;biotype=protein_coding;transcript_id=Rv2127 Chromosome ena exon 2388616 2390085 . + . Parent=transcript:Rv2127;Name=Rv2127-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2127-1;rank=1 Chromosome ena CDS 2388616 2390085 . + 0 ID=CDS:Rv2127;Parent=transcript:Rv2127;protein_id=Rv2127 ### -Chromosome ena gene 2390085 2390288 . + . ID=gene:Rv2128;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2128;logic_name=ena +Chromosome ena gene 2390085 2390288 . + . ID=gene:Rv2128;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2128;logic_name=ena Chromosome ena mRNA 2390085 2390288 . + . ID=transcript:Rv2128;Parent=gene:Rv2128;biotype=protein_coding;transcript_id=Rv2128 Chromosome ena exon 2390085 2390288 . + . Parent=transcript:Rv2128;Name=Rv2128-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2128-1;rank=1 Chromosome ena CDS 2390085 2390288 . + 0 ID=CDS:Rv2128;Parent=transcript:Rv2128;protein_id=Rv2128 ### -Chromosome ena gene 2390308 2391189 . - . ID=gene:Rv2129c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2129c;logic_name=ena +Chromosome ena gene 2390308 2391189 . - . ID=gene:Rv2129c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2129c;logic_name=ena Chromosome ena mRNA 2390308 2391189 . - . ID=transcript:Rv2129c;Parent=gene:Rv2129c;biotype=protein_coding;transcript_id=Rv2129c Chromosome ena exon 2390308 2391189 . - . Parent=transcript:Rv2129c;Name=Rv2129c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2129c-1;rank=1 Chromosome ena CDS 2390308 2391189 . - 0 ID=CDS:Rv2129c;Parent=transcript:Rv2129c;protein_id=Rv2129c ### -Chromosome ena gene 2391215 2392459 . - . ID=gene:Rv2130c;Name=mshC;biotype=protein_coding;description=Cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase MshC;gene_id=Rv2130c;logic_name=ena +Chromosome ena gene 2391215 2392459 . - . ID=gene:Rv2130c;Name=mshC;biotype=protein_coding;description=Cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase MshC;gene_id=Rv2130c;logic_name=ena Chromosome ena mRNA 2391215 2392459 . - . ID=transcript:Rv2130c;Parent=gene:Rv2130c;Name=mshC-1;biotype=protein_coding;transcript_id=Rv2130c Chromosome ena exon 2391215 2392459 . - . Parent=transcript:Rv2130c;Name=Rv2130c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2130c-1;rank=1 Chromosome ena CDS 2391215 2392459 . - 0 ID=CDS:Rv2130c;Parent=transcript:Rv2130c;protein_id=Rv2130c ### -Chromosome ena gene 2392517 2393320 . - . ID=gene:Rv2131c;Name=cysQ;biotype=protein_coding;description=Monophosphatase CysQ;gene_id=Rv2131c;logic_name=ena +Chromosome ena gene 2392517 2393320 . - . ID=gene:Rv2131c;Name=cysQ;biotype=protein_coding;description=Monophosphatase CysQ;gene_id=Rv2131c;logic_name=ena Chromosome ena mRNA 2392517 2393320 . - . ID=transcript:Rv2131c;Parent=gene:Rv2131c;Name=cysQ-1;biotype=protein_coding;transcript_id=Rv2131c Chromosome ena exon 2392517 2393320 . - . Parent=transcript:Rv2131c;Name=Rv2131c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2131c-1;rank=1 Chromosome ena CDS 2392517 2393320 . - 0 ID=CDS:Rv2131c;Parent=transcript:Rv2131c;protein_id=Rv2131c ### -Chromosome ena gene 2393411 2393641 . + . ID=gene:Rv2132;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2132;logic_name=ena +Chromosome ena gene 2393411 2393641 . + . ID=gene:Rv2132;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2132;logic_name=ena Chromosome ena mRNA 2393411 2393641 . + . ID=transcript:Rv2132;Parent=gene:Rv2132;biotype=protein_coding;transcript_id=Rv2132 Chromosome ena exon 2393411 2393641 . + . Parent=transcript:Rv2132;Name=Rv2132-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2132-1;rank=1 Chromosome ena CDS 2393411 2393641 . + 0 ID=CDS:Rv2132;Parent=transcript:Rv2132;protein_id=Rv2132 ### -Chromosome ena gene 2393851 2394639 . - . ID=gene:Rv2133c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2133c;logic_name=ena +Chromosome ena gene 2393851 2394639 . - . ID=gene:Rv2133c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2133c;logic_name=ena Chromosome ena mRNA 2393851 2394639 . - . ID=transcript:Rv2133c;Parent=gene:Rv2133c;biotype=protein_coding;transcript_id=Rv2133c Chromosome ena exon 2393851 2394639 . - . Parent=transcript:Rv2133c;Name=Rv2133c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2133c-1;rank=1 Chromosome ena CDS 2393851 2394639 . - 0 ID=CDS:Rv2133c;Parent=transcript:Rv2133c;protein_id=Rv2133c ### -Chromosome ena gene 2394650 2395237 . - . ID=gene:Rv2134c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2134c;logic_name=ena +Chromosome ena gene 2394650 2395237 . - . ID=gene:Rv2134c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2134c;logic_name=ena Chromosome ena mRNA 2394650 2395237 . - . ID=transcript:Rv2134c;Parent=gene:Rv2134c;biotype=protein_coding;transcript_id=Rv2134c Chromosome ena exon 2394650 2395237 . - . Parent=transcript:Rv2134c;Name=Rv2134c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2134c-1;rank=1 Chromosome ena CDS 2394650 2395237 . - 0 ID=CDS:Rv2134c;Parent=transcript:Rv2134c;protein_id=Rv2134c ### -Chromosome ena gene 2395301 2396011 . - . ID=gene:Rv2135c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2135c;logic_name=ena +Chromosome ena gene 2395301 2396011 . - . ID=gene:Rv2135c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2135c;logic_name=ena Chromosome ena mRNA 2395301 2396011 . - . ID=transcript:Rv2135c;Parent=gene:Rv2135c;biotype=protein_coding;transcript_id=Rv2135c Chromosome ena exon 2395301 2396011 . - . Parent=transcript:Rv2135c;Name=Rv2135c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2135c-1;rank=1 Chromosome ena CDS 2395301 2396011 . - 0 ID=CDS:Rv2135c;Parent=transcript:Rv2135c;protein_id=Rv2135c ### -Chromosome ena gene 2396008 2396838 . - . ID=gene:Rv2136c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2136c;logic_name=ena +Chromosome ena gene 2396008 2396838 . - . ID=gene:Rv2136c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2136c;logic_name=ena Chromosome ena mRNA 2396008 2396838 . - . ID=transcript:Rv2136c;Parent=gene:Rv2136c;biotype=protein_coding;transcript_id=Rv2136c Chromosome ena exon 2396008 2396838 . - . Parent=transcript:Rv2136c;Name=Rv2136c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2136c-1;rank=1 Chromosome ena CDS 2396008 2396838 . - 0 ID=CDS:Rv2136c;Parent=transcript:Rv2136c;protein_id=Rv2136c ### -Chromosome ena gene 2396902 2397315 . - . ID=gene:Rv2137c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2137c;logic_name=ena +Chromosome ena gene 2396902 2397315 . - . ID=gene:Rv2137c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2137c;logic_name=ena Chromosome ena mRNA 2396902 2397315 . - . ID=transcript:Rv2137c;Parent=gene:Rv2137c;biotype=protein_coding;transcript_id=Rv2137c Chromosome ena exon 2396902 2397315 . - . Parent=transcript:Rv2137c;Name=Rv2137c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2137c-1;rank=1 Chromosome ena CDS 2396902 2397315 . - 0 ID=CDS:Rv2137c;Parent=transcript:Rv2137c;protein_id=Rv2137c ### -Chromosome ena gene 2397330 2398406 . + . ID=gene:Rv2138;Name=lppL;biotype=protein_coding;description=Probable conserved lipoprotein LppL;gene_id=Rv2138;logic_name=ena +Chromosome ena gene 2397330 2398406 . + . ID=gene:Rv2138;Name=lppL;biotype=protein_coding;description=Probable conserved lipoprotein LppL;gene_id=Rv2138;logic_name=ena Chromosome ena mRNA 2397330 2398406 . + . ID=transcript:Rv2138;Parent=gene:Rv2138;Name=lppL-1;biotype=protein_coding;transcript_id=Rv2138 Chromosome ena exon 2397330 2398406 . + . Parent=transcript:Rv2138;Name=Rv2138-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2138-1;rank=1 Chromosome ena CDS 2397330 2398406 . + 0 ID=CDS:Rv2138;Parent=transcript:Rv2138;protein_id=Rv2138 ### -Chromosome ena gene 2398720 2399793 . + . ID=gene:Rv2139;Name=pyrD;biotype=protein_coding;description=Probable dihydroorotate dehydrogenase PyrD;gene_id=Rv2139;logic_name=ena +Chromosome ena gene 2398720 2399793 . + . ID=gene:Rv2139;Name=pyrD;biotype=protein_coding;description=Probable dihydroorotate dehydrogenase PyrD;gene_id=Rv2139;logic_name=ena Chromosome ena mRNA 2398720 2399793 . + . ID=transcript:Rv2139;Parent=gene:Rv2139;Name=pyrD-1;biotype=protein_coding;transcript_id=Rv2139 Chromosome ena exon 2398720 2399793 . + . Parent=transcript:Rv2139;Name=Rv2139-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2139-1;rank=1 Chromosome ena CDS 2398720 2399793 . + 0 ID=CDS:Rv2139;Parent=transcript:Rv2139;protein_id=Rv2139 ### -Chromosome ena gene 2399798 2400328 . - . ID=gene:Rv2140c;Name=TB18.6;biotype=protein_coding;description=Conserved protein TB18.6;gene_id=Rv2140c;logic_name=ena +Chromosome ena gene 2399798 2400328 . - . ID=gene:Rv2140c;Name=TB18.6;biotype=protein_coding;description=Conserved protein TB18.6;gene_id=Rv2140c;logic_name=ena Chromosome ena mRNA 2399798 2400328 . - . ID=transcript:Rv2140c;Parent=gene:Rv2140c;Name=TB18.6-1;biotype=protein_coding;transcript_id=Rv2140c Chromosome ena exon 2399798 2400328 . - . Parent=transcript:Rv2140c;Name=Rv2140c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2140c-1;rank=1 Chromosome ena CDS 2399798 2400328 . - 0 ID=CDS:Rv2140c;Parent=transcript:Rv2140c;protein_id=Rv2140c ### -Chromosome ena gene 2400376 2401722 . - . ID=gene:Rv2141c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2141c;logic_name=ena +Chromosome ena gene 2400376 2401722 . - . ID=gene:Rv2141c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2141c;logic_name=ena Chromosome ena mRNA 2400376 2401722 . - . ID=transcript:Rv2141c;Parent=gene:Rv2141c;biotype=protein_coding;transcript_id=Rv2141c Chromosome ena exon 2400376 2401722 . - . Parent=transcript:Rv2141c;Name=Rv2141c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2141c-1;rank=1 Chromosome ena CDS 2400376 2401722 . - 0 ID=CDS:Rv2141c;Parent=transcript:Rv2141c;protein_id=Rv2141c @@ -11206,183 +11206,183 @@ Chromosome ena transcript 2401987 2402072 . + . ID=transcript:EBG00000313328;Par Chromosome ena exon 2401987 2402072 . + . Parent=transcript:EBG00000313328;Name=EBG00000313328;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313328;rank=1 ### Chromosome ena_gene biological_region 2401987 2402072 . + . external_name=AL123456.3:gene:2401987..2402072;logic_name=ena_gene -Chromosome ena gene 2402193 2402510 . - . ID=gene:Rv2142c;Name=parE2;biotype=protein_coding;description=Possible toxin ParE2;gene_id=Rv2142c;logic_name=ena +Chromosome ena gene 2402193 2402510 . - . ID=gene:Rv2142c;Name=parE2;biotype=protein_coding;description=Possible toxin ParE2;gene_id=Rv2142c;logic_name=ena Chromosome ena mRNA 2402193 2402510 . - . ID=transcript:Rv2142c;Parent=gene:Rv2142c;Name=parE2-1;biotype=protein_coding;transcript_id=Rv2142c Chromosome ena exon 2402193 2402510 . - . Parent=transcript:Rv2142c;Name=Rv2142c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2142c-1;rank=1 Chromosome ena CDS 2402193 2402510 . - 0 ID=CDS:Rv2142c;Parent=transcript:Rv2142c;protein_id=Rv2142c ### -Chromosome ena gene 2402507 2402722 . - . ID=gene:Rv2142A;Name=parD2;biotype=protein_coding;description=Possible antitoxin ParD2;gene_id=Rv2142A;logic_name=ena +Chromosome ena gene 2402507 2402722 . - . ID=gene:Rv2142A;Name=parD2;biotype=protein_coding;description=Possible antitoxin ParD2;gene_id=Rv2142A;logic_name=ena Chromosome ena mRNA 2402507 2402722 . - . ID=transcript:Rv2142A;Parent=gene:Rv2142A;Name=parD2-1;biotype=protein_coding;transcript_id=Rv2142A Chromosome ena exon 2402507 2402722 . - . Parent=transcript:Rv2142A;Name=Rv2142A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2142A-1;rank=1 Chromosome ena CDS 2402507 2402722 . - 0 ID=CDS:Rv2142A;Parent=transcript:Rv2142A;protein_id=Rv2142A ### -Chromosome ena gene 2402977 2404035 . + . ID=gene:Rv2143;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2143;logic_name=ena +Chromosome ena gene 2402977 2404035 . + . ID=gene:Rv2143;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2143;logic_name=ena Chromosome ena mRNA 2402977 2404035 . + . ID=transcript:Rv2143;Parent=gene:Rv2143;biotype=protein_coding;transcript_id=Rv2143 Chromosome ena exon 2402977 2404035 . + . Parent=transcript:Rv2143;Name=Rv2143-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2143-1;rank=1 Chromosome ena CDS 2402977 2404035 . + 0 ID=CDS:Rv2143;Parent=transcript:Rv2143;protein_id=Rv2143 ### -Chromosome ena gene 2404165 2404521 . - . ID=gene:Rv2144c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv2144c;logic_name=ena +Chromosome ena gene 2404165 2404521 . - . ID=gene:Rv2144c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv2144c;logic_name=ena Chromosome ena mRNA 2404165 2404521 . - . ID=transcript:Rv2144c;Parent=gene:Rv2144c;biotype=protein_coding;transcript_id=Rv2144c Chromosome ena exon 2404165 2404521 . - . Parent=transcript:Rv2144c;Name=Rv2144c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2144c-1;rank=1 Chromosome ena CDS 2404165 2404521 . - 0 ID=CDS:Rv2144c;Parent=transcript:Rv2144c;protein_id=Rv2144c ### -Chromosome ena gene 2404616 2405398 . - . ID=gene:Rv2145c;Name=wag31;biotype=protein_coding;description=Diviva family protein Wag31;gene_id=Rv2145c;logic_name=ena +Chromosome ena gene 2404616 2405398 . - . ID=gene:Rv2145c;Name=wag31;biotype=protein_coding;description=Diviva family protein Wag31;gene_id=Rv2145c;logic_name=ena Chromosome ena mRNA 2404616 2405398 . - . ID=transcript:Rv2145c;Parent=gene:Rv2145c;Name=wag31-1;biotype=protein_coding;transcript_id=Rv2145c Chromosome ena exon 2404616 2405398 . - . Parent=transcript:Rv2145c;Name=Rv2145c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2145c-1;rank=1 Chromosome ena CDS 2404616 2405398 . - 0 ID=CDS:Rv2145c;Parent=transcript:Rv2145c;protein_id=Rv2145c ### -Chromosome ena gene 2405666 2405956 . - . ID=gene:Rv2146c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2146c;logic_name=ena +Chromosome ena gene 2405666 2405956 . - . ID=gene:Rv2146c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2146c;logic_name=ena Chromosome ena mRNA 2405666 2405956 . - . ID=transcript:Rv2146c;Parent=gene:Rv2146c;biotype=protein_coding;transcript_id=Rv2146c Chromosome ena exon 2405666 2405956 . - . Parent=transcript:Rv2146c;Name=Rv2146c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2146c-1;rank=1 Chromosome ena CDS 2405666 2405956 . - 0 ID=CDS:Rv2146c;Parent=transcript:Rv2146c;protein_id=Rv2146c ### -Chromosome ena gene 2406118 2406843 . - . ID=gene:Rv2147c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2147c;logic_name=ena +Chromosome ena gene 2406118 2406843 . - . ID=gene:Rv2147c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2147c;logic_name=ena Chromosome ena mRNA 2406118 2406843 . - . ID=transcript:Rv2147c;Parent=gene:Rv2147c;biotype=protein_coding;transcript_id=Rv2147c Chromosome ena exon 2406118 2406843 . - . Parent=transcript:Rv2147c;Name=Rv2147c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2147c-1;rank=1 Chromosome ena CDS 2406118 2406843 . - 0 ID=CDS:Rv2147c;Parent=transcript:Rv2147c;protein_id=Rv2147c ### -Chromosome ena gene 2406840 2407616 . - . ID=gene:Rv2148c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2148c;logic_name=ena +Chromosome ena gene 2406840 2407616 . - . ID=gene:Rv2148c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2148c;logic_name=ena Chromosome ena mRNA 2406840 2407616 . - . ID=transcript:Rv2148c;Parent=gene:Rv2148c;biotype=protein_coding;transcript_id=Rv2148c Chromosome ena exon 2406840 2407616 . - . Parent=transcript:Rv2148c;Name=Rv2148c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2148c-1;rank=1 Chromosome ena CDS 2406840 2407616 . - 0 ID=CDS:Rv2148c;Parent=transcript:Rv2148c;protein_id=Rv2148c ### -Chromosome ena gene 2407622 2408374 . - . ID=gene:Rv2149c;Name=yfiH;biotype=protein_coding;description=Conserved protein YfiH;gene_id=Rv2149c;logic_name=ena +Chromosome ena gene 2407622 2408374 . - . ID=gene:Rv2149c;Name=yfiH;biotype=protein_coding;description=Conserved protein YfiH;gene_id=Rv2149c;logic_name=ena Chromosome ena mRNA 2407622 2408374 . - . ID=transcript:Rv2149c;Parent=gene:Rv2149c;Name=yfiH-1;biotype=protein_coding;transcript_id=Rv2149c Chromosome ena exon 2407622 2408374 . - . Parent=transcript:Rv2149c;Name=Rv2149c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2149c-1;rank=1 Chromosome ena CDS 2407622 2408374 . - 0 ID=CDS:Rv2149c;Parent=transcript:Rv2149c;protein_id=Rv2149c ### -Chromosome ena gene 2408385 2409524 . - . ID=gene:Rv2150c;Name=ftsZ;biotype=protein_coding;description=Cell division protein FtsZ;gene_id=Rv2150c;logic_name=ena +Chromosome ena gene 2408385 2409524 . - . ID=gene:Rv2150c;Name=ftsZ;biotype=protein_coding;description=Cell division protein FtsZ;gene_id=Rv2150c;logic_name=ena Chromosome ena mRNA 2408385 2409524 . - . ID=transcript:Rv2150c;Parent=gene:Rv2150c;Name=ftsZ-1;biotype=protein_coding;transcript_id=Rv2150c Chromosome ena exon 2408385 2409524 . - . Parent=transcript:Rv2150c;Name=Rv2150c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2150c-1;rank=1 Chromosome ena CDS 2408385 2409524 . - 0 ID=CDS:Rv2150c;Parent=transcript:Rv2150c;protein_id=Rv2150c ### -Chromosome ena gene 2409697 2410641 . - . ID=gene:Rv2151c;Name=ftsQ;biotype=protein_coding;description=Possible cell division protein FtsQ;gene_id=Rv2151c;logic_name=ena +Chromosome ena gene 2409697 2410641 . - . ID=gene:Rv2151c;Name=ftsQ;biotype=protein_coding;description=Possible cell division protein FtsQ;gene_id=Rv2151c;logic_name=ena Chromosome ena mRNA 2409697 2410641 . - . ID=transcript:Rv2151c;Parent=gene:Rv2151c;Name=ftsQ-1;biotype=protein_coding;transcript_id=Rv2151c Chromosome ena exon 2409697 2410641 . - . Parent=transcript:Rv2151c;Name=Rv2151c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2151c-1;rank=1 Chromosome ena CDS 2409697 2410641 . - 0 ID=CDS:Rv2151c;Parent=transcript:Rv2151c;protein_id=Rv2151c ### -Chromosome ena gene 2410638 2412122 . - . ID=gene:Rv2152c;Name=murC;biotype=protein_coding;description=Probable UDP-N-acetylmuramate-alanine ligase MurC;gene_id=Rv2152c;logic_name=ena +Chromosome ena gene 2410638 2412122 . - . ID=gene:Rv2152c;Name=murC;biotype=protein_coding;description=Probable UDP-N-acetylmuramate-alanine ligase MurC;gene_id=Rv2152c;logic_name=ena Chromosome ena mRNA 2410638 2412122 . - . ID=transcript:Rv2152c;Parent=gene:Rv2152c;Name=murC-1;biotype=protein_coding;transcript_id=Rv2152c Chromosome ena exon 2410638 2412122 . - . Parent=transcript:Rv2152c;Name=Rv2152c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2152c-1;rank=1 Chromosome ena CDS 2410638 2412122 . - 0 ID=CDS:Rv2152c;Parent=transcript:Rv2152c;protein_id=Rv2152c ### -Chromosome ena gene 2412119 2413351 . - . ID=gene:Rv2153c;Name=murG;biotype=protein_coding;description=Probable UPD-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG;gene_id=Rv2153c;logic_name=ena +Chromosome ena gene 2412119 2413351 . - . ID=gene:Rv2153c;Name=murG;biotype=protein_coding;description=Probable UPD-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG;gene_id=Rv2153c;logic_name=ena Chromosome ena mRNA 2412119 2413351 . - . ID=transcript:Rv2153c;Parent=gene:Rv2153c;Name=murG-1;biotype=protein_coding;transcript_id=Rv2153c Chromosome ena exon 2412119 2413351 . - . Parent=transcript:Rv2153c;Name=Rv2153c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2153c-1;rank=1 Chromosome ena CDS 2412119 2413351 . - 0 ID=CDS:Rv2153c;Parent=transcript:Rv2153c;protein_id=Rv2153c ### -Chromosome ena gene 2413348 2414922 . - . ID=gene:Rv2154c;Name=ftsW;biotype=protein_coding;description=FtsW-like protein FtsW;gene_id=Rv2154c;logic_name=ena +Chromosome ena gene 2413348 2414922 . - . ID=gene:Rv2154c;Name=ftsW;biotype=protein_coding;description=FtsW-like protein FtsW;gene_id=Rv2154c;logic_name=ena Chromosome ena mRNA 2413348 2414922 . - . ID=transcript:Rv2154c;Parent=gene:Rv2154c;Name=ftsW-1;biotype=protein_coding;transcript_id=Rv2154c Chromosome ena exon 2413348 2414922 . - . Parent=transcript:Rv2154c;Name=Rv2154c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2154c-1;rank=1 Chromosome ena CDS 2413348 2414922 . - 0 ID=CDS:Rv2154c;Parent=transcript:Rv2154c;protein_id=Rv2154c ### -Chromosome ena gene 2414934 2416394 . - . ID=gene:Rv2155c;Name=murD;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD;gene_id=Rv2155c;logic_name=ena +Chromosome ena gene 2414934 2416394 . - . ID=gene:Rv2155c;Name=murD;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD;gene_id=Rv2155c;logic_name=ena Chromosome ena mRNA 2414934 2416394 . - . ID=transcript:Rv2155c;Parent=gene:Rv2155c;Name=murD-1;biotype=protein_coding;transcript_id=Rv2155c Chromosome ena exon 2414934 2416394 . - . Parent=transcript:Rv2155c;Name=Rv2155c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2155c-1;rank=1 Chromosome ena CDS 2414934 2416394 . - 0 ID=CDS:Rv2155c;Parent=transcript:Rv2155c;protein_id=Rv2155c ### -Chromosome ena gene 2416396 2417475 . - . ID=gene:Rv2156c;Name=murX;biotype=protein_coding;description=Probable phospho-N-acetylmuramoyl-pentappeptidetransferase MurX;gene_id=Rv2156c;logic_name=ena +Chromosome ena gene 2416396 2417475 . - . ID=gene:Rv2156c;Name=murX;biotype=protein_coding;description=Probable phospho-N-acetylmuramoyl-pentappeptidetransferase MurX;gene_id=Rv2156c;logic_name=ena Chromosome ena mRNA 2416396 2417475 . - . ID=transcript:Rv2156c;Parent=gene:Rv2156c;Name=murX-1;biotype=protein_coding;transcript_id=Rv2156c Chromosome ena exon 2416396 2417475 . - . Parent=transcript:Rv2156c;Name=Rv2156c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2156c-1;rank=1 Chromosome ena CDS 2416396 2417475 . - 0 ID=CDS:Rv2156c;Parent=transcript:Rv2156c;protein_id=Rv2156c ### -Chromosome ena gene 2417472 2419004 . - . ID=gene:Rv2157c;Name=murF;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C 6-diaminopimelate-D-alanyl-D-alanyl ligase MurF;gene_id=Rv2157c;logic_name=ena +Chromosome ena gene 2417472 2419004 . - . ID=gene:Rv2157c;Name=murF;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C 6-diaminopimelate-D-alanyl-D-alanyl ligase MurF;gene_id=Rv2157c;logic_name=ena Chromosome ena mRNA 2417472 2419004 . - . ID=transcript:Rv2157c;Parent=gene:Rv2157c;Name=murF-1;biotype=protein_coding;transcript_id=Rv2157c Chromosome ena exon 2417472 2419004 . - . Parent=transcript:Rv2157c;Name=Rv2157c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2157c-1;rank=1 Chromosome ena CDS 2417472 2419004 . - 0 ID=CDS:Rv2157c;Parent=transcript:Rv2157c;protein_id=Rv2157c ### -Chromosome ena gene 2419001 2420608 . - . ID=gene:Rv2158c;Name=murE;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6-diaminopimelate ligase MurE;gene_id=Rv2158c;logic_name=ena +Chromosome ena gene 2419001 2420608 . - . ID=gene:Rv2158c;Name=murE;biotype=protein_coding;description=Probable UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6-diaminopimelate ligase MurE;gene_id=Rv2158c;logic_name=ena Chromosome ena mRNA 2419001 2420608 . - . ID=transcript:Rv2158c;Parent=gene:Rv2158c;Name=murE-1;biotype=protein_coding;transcript_id=Rv2158c Chromosome ena exon 2419001 2420608 . - . Parent=transcript:Rv2158c;Name=Rv2158c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2158c-1;rank=1 Chromosome ena CDS 2419001 2420608 . - 0 ID=CDS:Rv2158c;Parent=transcript:Rv2158c;protein_id=Rv2158c ### -Chromosome ena gene 2420631 2421665 . - . ID=gene:Rv2159c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2159c;logic_name=ena +Chromosome ena gene 2420631 2421665 . - . ID=gene:Rv2159c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2159c;logic_name=ena Chromosome ena mRNA 2420631 2421665 . - . ID=transcript:Rv2159c;Parent=gene:Rv2159c;biotype=protein_coding;transcript_id=Rv2159c Chromosome ena exon 2420631 2421665 . - . Parent=transcript:Rv2159c;Name=Rv2159c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2159c-1;rank=1 Chromosome ena CDS 2420631 2421665 . - 0 ID=CDS:Rv2159c;Parent=transcript:Rv2159c;protein_id=Rv2159c ### -Chromosome ena gene 2421643 2422278 . - . ID=gene:Rv2160A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2160A;logic_name=ena +Chromosome ena gene 2421643 2422278 . - . ID=gene:Rv2160A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2160A;logic_name=ena Chromosome ena mRNA 2421643 2422278 . - . ID=transcript:Rv2160A;Parent=gene:Rv2160A;biotype=protein_coding;transcript_id=Rv2160A Chromosome ena exon 2421643 2422278 . - . Parent=transcript:Rv2160A;Name=Rv2160A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2160A-1;rank=1 Chromosome ena CDS 2421643 2422278 . - 0 ID=CDS:Rv2160A;Parent=transcript:Rv2160A;protein_id=Rv2160A ### -Chromosome ena gene 2421662 2422003 . - . ID=gene:Rv2160c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2160c;logic_name=ena +Chromosome ena gene 2421662 2422003 . - . ID=gene:Rv2160c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2160c;logic_name=ena Chromosome ena mRNA 2421662 2422003 . - . ID=transcript:Rv2160c;Parent=gene:Rv2160c;biotype=protein_coding;transcript_id=Rv2160c Chromosome ena exon 2421662 2422003 . - . Parent=transcript:Rv2160c;Name=Rv2160c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2160c-1;rank=1 Chromosome ena CDS 2421662 2422003 . - 0 ID=CDS:Rv2160c;Parent=transcript:Rv2160c;protein_id=Rv2160c ### -Chromosome ena gene 2422271 2423137 . - . ID=gene:Rv2161c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2161c;logic_name=ena +Chromosome ena gene 2422271 2423137 . - . ID=gene:Rv2161c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2161c;logic_name=ena Chromosome ena mRNA 2422271 2423137 . - . ID=transcript:Rv2161c;Parent=gene:Rv2161c;biotype=protein_coding;transcript_id=Rv2161c Chromosome ena exon 2422271 2423137 . - . Parent=transcript:Rv2161c;Name=Rv2161c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2161c-1;rank=1 Chromosome ena CDS 2422271 2423137 . - 0 ID=CDS:Rv2161c;Parent=transcript:Rv2161c;protein_id=Rv2161c ### -Chromosome ena gene 2423240 2424838 . - . ID=gene:Rv2162c;Name=PE_PGRS38;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS38;gene_id=Rv2162c;logic_name=ena +Chromosome ena gene 2423240 2424838 . - . ID=gene:Rv2162c;Name=PE_PGRS38;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS38;gene_id=Rv2162c;logic_name=ena Chromosome ena mRNA 2423240 2424838 . - . ID=transcript:Rv2162c;Parent=gene:Rv2162c;Name=PE_PGRS38-1;biotype=protein_coding;transcript_id=Rv2162c Chromosome ena exon 2423240 2424838 . - . Parent=transcript:Rv2162c;Name=Rv2162c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2162c-1;rank=1 Chromosome ena CDS 2423240 2424838 . - 0 ID=CDS:Rv2162c;Parent=transcript:Rv2162c;protein_id=Rv2162c ### -Chromosome ena gene 2425048 2427087 . - . ID=gene:Rv2163c;Name=pbpB;biotype=protein_coding;description=Probable penicillin-binding membrane protein PbpB;gene_id=Rv2163c;logic_name=ena +Chromosome ena gene 2425048 2427087 . - . ID=gene:Rv2163c;Name=pbpB;biotype=protein_coding;description=Probable penicillin-binding membrane protein PbpB;gene_id=Rv2163c;logic_name=ena Chromosome ena mRNA 2425048 2427087 . - . ID=transcript:Rv2163c;Parent=gene:Rv2163c;Name=pbpB-1;biotype=protein_coding;transcript_id=Rv2163c Chromosome ena exon 2425048 2427087 . - . Parent=transcript:Rv2163c;Name=Rv2163c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2163c-1;rank=1 Chromosome ena CDS 2425048 2427087 . - 0 ID=CDS:Rv2163c;Parent=transcript:Rv2163c;protein_id=Rv2163c ### -Chromosome ena gene 2427084 2428238 . - . ID=gene:Rv2164c;biotype=protein_coding;description=Probable conserved proline rich membrane protein;gene_id=Rv2164c;logic_name=ena +Chromosome ena gene 2427084 2428238 . - . ID=gene:Rv2164c;biotype=protein_coding;description=Probable conserved proline rich membrane protein;gene_id=Rv2164c;logic_name=ena Chromosome ena mRNA 2427084 2428238 . - . ID=transcript:Rv2164c;Parent=gene:Rv2164c;biotype=protein_coding;transcript_id=Rv2164c Chromosome ena exon 2427084 2428238 . - . Parent=transcript:Rv2164c;Name=Rv2164c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2164c-1;rank=1 Chromosome ena CDS 2427084 2428238 . - 0 ID=CDS:Rv2164c;Parent=transcript:Rv2164c;protein_id=Rv2164c ### -Chromosome ena gene 2428235 2429425 . - . ID=gene:Rv2165c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2165c;logic_name=ena +Chromosome ena gene 2428235 2429425 . - . ID=gene:Rv2165c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2165c;logic_name=ena Chromosome ena mRNA 2428235 2429425 . - . ID=transcript:Rv2165c;Parent=gene:Rv2165c;biotype=protein_coding;transcript_id=Rv2165c Chromosome ena exon 2428235 2429425 . - . Parent=transcript:Rv2165c;Name=Rv2165c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2165c-1;rank=1 Chromosome ena CDS 2428235 2429425 . - 0 ID=CDS:Rv2165c;Parent=transcript:Rv2165c;protein_id=Rv2165c ### -Chromosome ena gene 2429427 2429858 . - . ID=gene:Rv2166c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2166c;logic_name=ena +Chromosome ena gene 2429427 2429858 . - . ID=gene:Rv2166c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2166c;logic_name=ena Chromosome ena mRNA 2429427 2429858 . - . ID=transcript:Rv2166c;Parent=gene:Rv2166c;biotype=protein_coding;transcript_id=Rv2166c Chromosome ena exon 2429427 2429858 . - . Parent=transcript:Rv2166c;Name=Rv2166c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2166c-1;rank=1 Chromosome ena CDS 2429427 2429858 . - 0 ID=CDS:Rv2166c;Parent=transcript:Rv2166c;protein_id=Rv2166c ### -Chromosome ena_mobile_element biological_region 2430117 2431471 . - . external_name=IS6110-6%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 2430159 2431145 . - . ID=gene:Rv2167c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2167c;logic_name=ena +Chromosome ena_mobile_element biological_region 2430117 2431471 . - . external_name=IS6110-6%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 2430159 2431145 . - . ID=gene:Rv2167c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2167c;logic_name=ena Chromosome ena mRNA 2430159 2431145 . - . ID=transcript:Rv2167c;Parent=gene:Rv2167c;biotype=protein_coding;transcript_id=Rv2167c Chromosome ena exon 2430159 2431145 . - . Parent=transcript:Rv2167c;Name=Rv2167c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2167c-1;rank=1 Chromosome ena CDS 2430159 2431145 . - 0 ID=CDS:Rv2167c;Parent=transcript:Rv2167c;protein_id=Rv2167c ### -Chromosome ena gene 2431094 2431420 . - . ID=gene:Rv2168c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2168c;logic_name=ena +Chromosome ena gene 2431094 2431420 . - . ID=gene:Rv2168c;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2168c;logic_name=ena Chromosome ena mRNA 2431094 2431420 . - . ID=transcript:Rv2168c;Parent=gene:Rv2168c;biotype=protein_coding;transcript_id=Rv2168c Chromosome ena exon 2431094 2431420 . - . Parent=transcript:Rv2168c;Name=Rv2168c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2168c-1;rank=1 Chromosome ena CDS 2431094 2431420 . - 0 ID=CDS:Rv2168c;Parent=transcript:Rv2168c;protein_id=Rv2168c ### -Chromosome ena gene 2431565 2431969 . - . ID=gene:Rv2169c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2169c;logic_name=ena +Chromosome ena gene 2431565 2431969 . - . ID=gene:Rv2169c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2169c;logic_name=ena Chromosome ena mRNA 2431565 2431969 . - . ID=transcript:Rv2169c;Parent=gene:Rv2169c;biotype=protein_coding;transcript_id=Rv2169c Chromosome ena exon 2431565 2431969 . - . Parent=transcript:Rv2169c;Name=Rv2169c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2169c-1;rank=1 Chromosome ena CDS 2431565 2431969 . - 0 ID=CDS:Rv2169c;Parent=transcript:Rv2169c;protein_id=Rv2169c ### -Chromosome ena gene 2432235 2432855 . + . ID=gene:Rv2170;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2170;logic_name=ena +Chromosome ena gene 2432235 2432855 . + . ID=gene:Rv2170;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2170;logic_name=ena Chromosome ena mRNA 2432235 2432855 . + . ID=transcript:Rv2170;Parent=gene:Rv2170;biotype=protein_coding;transcript_id=Rv2170 Chromosome ena exon 2432235 2432855 . + . Parent=transcript:Rv2170;Name=Rv2170-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2170-1;rank=1 Chromosome ena CDS 2432235 2432855 . + 0 ID=CDS:Rv2170;Parent=transcript:Rv2170;protein_id=Rv2170 ### -Chromosome ena gene 2432951 2433634 . + . ID=gene:Rv2171;Name=lppM;biotype=protein_coding;description=Probable conserved lipoprotein LppM;gene_id=Rv2171;logic_name=ena +Chromosome ena gene 2432951 2433634 . + . ID=gene:Rv2171;Name=lppM;biotype=protein_coding;description=Probable conserved lipoprotein LppM;gene_id=Rv2171;logic_name=ena Chromosome ena mRNA 2432951 2433634 . + . ID=transcript:Rv2171;Parent=gene:Rv2171;Name=lppM-1;biotype=protein_coding;transcript_id=Rv2171 Chromosome ena exon 2432951 2433634 . + . Parent=transcript:Rv2171;Name=Rv2171-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2171-1;rank=1 Chromosome ena CDS 2432951 2433634 . + 0 ID=CDS:Rv2171;Parent=transcript:Rv2171;protein_id=Rv2171 ### -Chromosome ena gene 2433631 2434536 . - . ID=gene:Rv2172c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2172c;logic_name=ena +Chromosome ena gene 2433631 2434536 . - . ID=gene:Rv2172c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2172c;logic_name=ena Chromosome ena mRNA 2433631 2434536 . - . ID=transcript:Rv2172c;Parent=gene:Rv2172c;biotype=protein_coding;transcript_id=Rv2172c Chromosome ena exon 2433631 2434536 . - . Parent=transcript:Rv2172c;Name=Rv2172c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2172c-1;rank=1 Chromosome ena CDS 2433631 2434536 . - 0 ID=CDS:Rv2172c;Parent=transcript:Rv2172c;protein_id=Rv2172c ### -Chromosome ena gene 2434847 2435905 . + . ID=gene:Rv2173;Name=idsA2;biotype=protein_coding;description=Probable geranylgeranyl pyrophosphate synthetase IdsA2 (ggppsase) (GGPP synthetase) (geranylgeranyl diphosphate synthase);gene_id=Rv2173;logic_name=ena +Chromosome ena gene 2434847 2435905 . + . ID=gene:Rv2173;Name=idsA2;biotype=protein_coding;description=Probable geranylgeranyl pyrophosphate synthetase IdsA2 (ggppsase) (GGPP synthetase) (geranylgeranyl diphosphate synthase);gene_id=Rv2173;logic_name=ena Chromosome ena mRNA 2434847 2435905 . + . ID=transcript:Rv2173;Parent=gene:Rv2173;Name=idsA2-1;biotype=protein_coding;transcript_id=Rv2173 Chromosome ena exon 2434847 2435905 . + . Parent=transcript:Rv2173;Name=Rv2173-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2173-1;rank=1 Chromosome ena CDS 2434847 2435905 . + 0 ID=CDS:Rv2173;Parent=transcript:Rv2173;protein_id=Rv2173 ### -Chromosome ena gene 2435909 2437459 . + . ID=gene:Rv2174;Name=mptA;biotype=protein_coding;description=Alpha(1->6)mannosyltransferase. Possible conserved integral membrane protein.;gene_id=Rv2174;logic_name=ena +Chromosome ena gene 2435909 2437459 . + . ID=gene:Rv2174;Name=mptA;biotype=protein_coding;description=Alpha(1->6)mannosyltransferase. Possible conserved integral membrane protein.;gene_id=Rv2174;logic_name=ena Chromosome ena mRNA 2435909 2437459 . + . ID=transcript:Rv2174;Parent=gene:Rv2174;Name=mptA-1;biotype=protein_coding;transcript_id=Rv2174 Chromosome ena exon 2435909 2437459 . + . Parent=transcript:Rv2174;Name=Rv2174-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2174-1;rank=1 Chromosome ena CDS 2435909 2437459 . + 0 ID=CDS:Rv2174;Parent=transcript:Rv2174;protein_id=Rv2174 ### -Chromosome ena gene 2437446 2437886 . - . ID=gene:Rv2175c;biotype=protein_coding;description=Conserved regulatory protein;gene_id=Rv2175c;logic_name=ena +Chromosome ena gene 2437446 2437886 . - . ID=gene:Rv2175c;biotype=protein_coding;description=Conserved regulatory protein;gene_id=Rv2175c;logic_name=ena Chromosome ena mRNA 2437446 2437886 . - . ID=transcript:Rv2175c;Parent=gene:Rv2175c;biotype=protein_coding;transcript_id=Rv2175c Chromosome ena exon 2437446 2437886 . - . Parent=transcript:Rv2175c;Name=Rv2175c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2175c-1;rank=1 Chromosome ena CDS 2437446 2437886 . - 0 ID=CDS:Rv2175c;Parent=transcript:Rv2175c;protein_id=Rv2175c @@ -11392,28 +11392,28 @@ Chromosome ena transcript 2437823 2437866 . - . ID=transcript:EBG00000313321;Par Chromosome ena exon 2437823 2437866 . - . Parent=transcript:EBG00000313321;Name=EBG00000313321;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313321;rank=1 ### Chromosome ena_gene biological_region 2437823 2437866 . - . external_name=AL123456.3:gene:complement(2437823..2437866);logic_name=ena_gene -Chromosome ena gene 2437941 2439140 . + . ID=gene:Rv2176;Name=pknL;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase L PknL (protein kinase L) (STPK L);gene_id=Rv2176;logic_name=ena +Chromosome ena gene 2437941 2439140 . + . ID=gene:Rv2176;Name=pknL;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase L PknL (protein kinase L) (STPK L);gene_id=Rv2176;logic_name=ena Chromosome ena mRNA 2437941 2439140 . + . ID=transcript:Rv2176;Parent=gene:Rv2176;Name=pknL-1;biotype=protein_coding;transcript_id=Rv2176 Chromosome ena exon 2437941 2439140 . + . Parent=transcript:Rv2176;Name=Rv2176-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2176-1;rank=1 Chromosome ena CDS 2437941 2439140 . + 0 ID=CDS:Rv2176;Parent=transcript:Rv2176;protein_id=Rv2176 ### -Chromosome ena_mobile_element biological_region 2439145 2439948 . - . external_name=IS1558-1%2C len: 804 nt. Insertion sequence IS1558%2Cnearly identical to complement of region 24105 24908 in EM_BA:MTCY428 Z81451 Mycobacterium tuberculosis cosmid Y428.;logic_name=ena_mobile_element -Chromosome ena gene 2439282 2439947 . - . ID=gene:Rv2177c;biotype=protein_coding;description=Possible transposase;gene_id=Rv2177c;logic_name=ena +Chromosome ena_mobile_element biological_region 2439145 2439948 . - . external_name=IS1558-1%2C len: 804 nt. Insertion sequence IS1558%2Cnearly identical to complement of region 24105 24908 in EM_BA:MTCY428 Z81451 Mycobacterium tuberculosis cosmid Y428.;logic_name=ena_mobile_element +Chromosome ena gene 2439282 2439947 . - . ID=gene:Rv2177c;biotype=protein_coding;description=Possible transposase;gene_id=Rv2177c;logic_name=ena Chromosome ena mRNA 2439282 2439947 . - . ID=transcript:Rv2177c;Parent=gene:Rv2177c;biotype=protein_coding;transcript_id=Rv2177c Chromosome ena exon 2439282 2439947 . - . Parent=transcript:Rv2177c;Name=Rv2177c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2177c-1;rank=1 Chromosome ena CDS 2439282 2439947 . - 0 ID=CDS:Rv2177c;Parent=transcript:Rv2177c;protein_id=Rv2177c ### -Chromosome ena gene 2440332 2441720 . - . ID=gene:Rv2178c;Name=aroG;biotype=protein_coding;description=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroG (DAHP synthetase%2C phenylalanine-repressible);gene_id=Rv2178c;logic_name=ena +Chromosome ena gene 2440332 2441720 . - . ID=gene:Rv2178c;Name=aroG;biotype=protein_coding;description=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroG (DAHP synthetase%2C phenylalanine-repressible);gene_id=Rv2178c;logic_name=ena Chromosome ena mRNA 2440332 2441720 . - . ID=transcript:Rv2178c;Parent=gene:Rv2178c;Name=aroG-1;biotype=protein_coding;transcript_id=Rv2178c Chromosome ena exon 2440332 2441720 . - . Parent=transcript:Rv2178c;Name=Rv2178c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2178c-1;rank=1 Chromosome ena CDS 2440332 2441720 . - 0 ID=CDS:Rv2178c;Parent=transcript:Rv2178c;protein_id=Rv2178c ### -Chromosome ena gene 2441811 2442317 . - . ID=gene:Rv2179c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2179c;logic_name=ena +Chromosome ena gene 2441811 2442317 . - . ID=gene:Rv2179c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2179c;logic_name=ena Chromosome ena mRNA 2441811 2442317 . - . ID=transcript:Rv2179c;Parent=gene:Rv2179c;biotype=protein_coding;transcript_id=Rv2179c Chromosome ena exon 2441811 2442317 . - . Parent=transcript:Rv2179c;Name=Rv2179c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2179c-1;rank=1 Chromosome ena CDS 2441811 2442317 . - 0 ID=CDS:Rv2179c;Parent=transcript:Rv2179c;protein_id=Rv2179c ### -Chromosome ena gene 2442327 2443214 . - . ID=gene:Rv2180c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2180c;logic_name=ena +Chromosome ena gene 2442327 2443214 . - . ID=gene:Rv2180c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2180c;logic_name=ena Chromosome ena mRNA 2442327 2443214 . - . ID=transcript:Rv2180c;Parent=gene:Rv2180c;biotype=protein_coding;transcript_id=Rv2180c Chromosome ena exon 2442327 2443214 . - . Parent=transcript:Rv2180c;Name=Rv2180c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2180c-1;rank=1 Chromosome ena CDS 2442327 2443214 . - 0 ID=CDS:Rv2180c;Parent=transcript:Rv2180c;protein_id=Rv2180c @@ -11423,299 +11423,299 @@ Chromosome ena mRNA 2443302 2444585 . + . ID=transcript:Rv2181;Parent=gene:Rv218 Chromosome ena exon 2443302 2444585 . + . Parent=transcript:Rv2181;Name=Rv2181-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2181-1;rank=1 Chromosome ena CDS 2443302 2444585 . + 0 ID=CDS:Rv2181;Parent=transcript:Rv2181;protein_id=Rv2181 ### -Chromosome ena gene 2444586 2445329 . - . ID=gene:Rv2182c;biotype=protein_coding;description=1-acylglycerol-3-phosphate O-acyltransferase;gene_id=Rv2182c;logic_name=ena +Chromosome ena gene 2444586 2445329 . - . ID=gene:Rv2182c;biotype=protein_coding;description=1-acylglycerol-3-phosphate O-acyltransferase;gene_id=Rv2182c;logic_name=ena Chromosome ena mRNA 2444586 2445329 . - . ID=transcript:Rv2182c;Parent=gene:Rv2182c;biotype=protein_coding;transcript_id=Rv2182c Chromosome ena exon 2444586 2445329 . - . Parent=transcript:Rv2182c;Name=Rv2182c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2182c-1;rank=1 Chromosome ena CDS 2444586 2445329 . - 0 ID=CDS:Rv2182c;Parent=transcript:Rv2182c;protein_id=Rv2182c ### -Chromosome ena gene 2445415 2445810 . - . ID=gene:Rv2183c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2183c;logic_name=ena +Chromosome ena gene 2445415 2445810 . - . ID=gene:Rv2183c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2183c;logic_name=ena Chromosome ena mRNA 2445415 2445810 . - . ID=transcript:Rv2183c;Parent=gene:Rv2183c;biotype=protein_coding;transcript_id=Rv2183c Chromosome ena exon 2445415 2445810 . - . Parent=transcript:Rv2183c;Name=Rv2183c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2183c-1;rank=1 Chromosome ena CDS 2445415 2445810 . - 0 ID=CDS:Rv2183c;Parent=transcript:Rv2183c;protein_id=Rv2183c ### -Chromosome ena gene 2445807 2446946 . - . ID=gene:Rv2184c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2184c;logic_name=ena +Chromosome ena gene 2445807 2446946 . - . ID=gene:Rv2184c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2184c;logic_name=ena Chromosome ena mRNA 2445807 2446946 . - . ID=transcript:Rv2184c;Parent=gene:Rv2184c;biotype=protein_coding;transcript_id=Rv2184c Chromosome ena exon 2445807 2446946 . - . Parent=transcript:Rv2184c;Name=Rv2184c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2184c-1;rank=1 Chromosome ena CDS 2445807 2446946 . - 0 ID=CDS:Rv2184c;Parent=transcript:Rv2184c;protein_id=Rv2184c ### -Chromosome ena gene 2447066 2447500 . - . ID=gene:Rv2185c;Name=TB16.3;biotype=protein_coding;description=Conserved protein TB16.3;gene_id=Rv2185c;logic_name=ena +Chromosome ena gene 2447066 2447500 . - . ID=gene:Rv2185c;Name=TB16.3;biotype=protein_coding;description=Conserved protein TB16.3;gene_id=Rv2185c;logic_name=ena Chromosome ena mRNA 2447066 2447500 . - . ID=transcript:Rv2185c;Parent=gene:Rv2185c;Name=TB16.3-1;biotype=protein_coding;transcript_id=Rv2185c Chromosome ena exon 2447066 2447500 . - . Parent=transcript:Rv2185c;Name=Rv2185c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2185c-1;rank=1 Chromosome ena CDS 2447066 2447500 . - 0 ID=CDS:Rv2185c;Parent=transcript:Rv2185c;protein_id=Rv2185c ### -Chromosome ena gene 2447605 2447994 . - . ID=gene:Rv2186c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2186c;logic_name=ena +Chromosome ena gene 2447605 2447994 . - . ID=gene:Rv2186c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2186c;logic_name=ena Chromosome ena mRNA 2447605 2447994 . - . ID=transcript:Rv2186c;Parent=gene:Rv2186c;biotype=protein_coding;transcript_id=Rv2186c Chromosome ena exon 2447605 2447994 . - . Parent=transcript:Rv2186c;Name=Rv2186c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2186c-1;rank=1 Chromosome ena CDS 2447605 2447994 . - 0 ID=CDS:Rv2186c;Parent=transcript:Rv2186c;protein_id=Rv2186c ### -Chromosome ena gene 2448160 2449962 . + . ID=gene:Rv2187;Name=fadD15;biotype=protein_coding;description=Long-chain-fatty-acid-CoA ligase FadD15 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2187;logic_name=ena +Chromosome ena gene 2448160 2449962 . + . ID=gene:Rv2187;Name=fadD15;biotype=protein_coding;description=Long-chain-fatty-acid-CoA ligase FadD15 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2187;logic_name=ena Chromosome ena mRNA 2448160 2449962 . + . ID=transcript:Rv2187;Parent=gene:Rv2187;Name=fadD15-1;biotype=protein_coding;transcript_id=Rv2187 Chromosome ena exon 2448160 2449962 . + . Parent=transcript:Rv2187;Name=Rv2187-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2187-1;rank=1 Chromosome ena CDS 2448160 2449962 . + 0 ID=CDS:Rv2187;Parent=transcript:Rv2187;protein_id=Rv2187 ### -Chromosome ena gene 2449993 2451150 . - . ID=gene:Rv2188c;Name=pimB;biotype=protein_coding;description=Mannosyltransferase PimB;gene_id=Rv2188c;logic_name=ena +Chromosome ena gene 2449993 2451150 . - . ID=gene:Rv2188c;Name=pimB;biotype=protein_coding;description=Mannosyltransferase PimB;gene_id=Rv2188c;logic_name=ena Chromosome ena mRNA 2449993 2451150 . - . ID=transcript:Rv2188c;Parent=gene:Rv2188c;Name=pimB-1;biotype=protein_coding;transcript_id=Rv2188c Chromosome ena exon 2449993 2451150 . - . Parent=transcript:Rv2188c;Name=Rv2188c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2188c-1;rank=1 Chromosome ena CDS 2449993 2451150 . - 0 ID=CDS:Rv2188c;Parent=transcript:Rv2188c;protein_id=Rv2188c ### -Chromosome ena gene 2451247 2452020 . - . ID=gene:Rv2189c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2189c;logic_name=ena +Chromosome ena gene 2451247 2452020 . - . ID=gene:Rv2189c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2189c;logic_name=ena Chromosome ena mRNA 2451247 2452020 . - . ID=transcript:Rv2189c;Parent=gene:Rv2189c;biotype=protein_coding;transcript_id=Rv2189c Chromosome ena exon 2451247 2452020 . - . Parent=transcript:Rv2189c;Name=Rv2189c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2189c-1;rank=1 Chromosome ena CDS 2451247 2452020 . - 0 ID=CDS:Rv2189c;Parent=transcript:Rv2189c;protein_id=Rv2189c ### -Chromosome ena gene 2452115 2453272 . - . ID=gene:Rv2190c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2190c;logic_name=ena +Chromosome ena gene 2452115 2453272 . - . ID=gene:Rv2190c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2190c;logic_name=ena Chromosome ena mRNA 2452115 2453272 . - . ID=transcript:Rv2190c;Parent=gene:Rv2190c;biotype=protein_coding;transcript_id=Rv2190c Chromosome ena exon 2452115 2453272 . - . Parent=transcript:Rv2190c;Name=Rv2190c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2190c-1;rank=1 Chromosome ena CDS 2452115 2453272 . - 0 ID=CDS:Rv2190c;Parent=transcript:Rv2190c;protein_id=Rv2190c ### -Chromosome ena gene 2453819 2455756 . + . ID=gene:Rv2191;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2191;logic_name=ena +Chromosome ena gene 2453819 2455756 . + . ID=gene:Rv2191;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2191;logic_name=ena Chromosome ena mRNA 2453819 2455756 . + . ID=transcript:Rv2191;Parent=gene:Rv2191;biotype=protein_coding;transcript_id=Rv2191 Chromosome ena exon 2453819 2455756 . + . Parent=transcript:Rv2191;Name=Rv2191-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2191-1;rank=1 Chromosome ena CDS 2453819 2455756 . + 0 ID=CDS:Rv2191;Parent=transcript:Rv2191;protein_id=Rv2191 ### -Chromosome ena gene 2455631 2456743 . - . ID=gene:Rv2192c;Name=trpD;biotype=protein_coding;description=Probable anthranilate phosphoribosyltransferase TrpD;gene_id=Rv2192c;logic_name=ena +Chromosome ena gene 2455631 2456743 . - . ID=gene:Rv2192c;Name=trpD;biotype=protein_coding;description=Probable anthranilate phosphoribosyltransferase TrpD;gene_id=Rv2192c;logic_name=ena Chromosome ena mRNA 2455631 2456743 . - . ID=transcript:Rv2192c;Parent=gene:Rv2192c;Name=trpD-1;biotype=protein_coding;transcript_id=Rv2192c Chromosome ena exon 2455631 2456743 . - . Parent=transcript:Rv2192c;Name=Rv2192c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2192c-1;rank=1 Chromosome ena CDS 2455631 2456743 . - 0 ID=CDS:Rv2192c;Parent=transcript:Rv2192c;protein_id=Rv2192c ### -Chromosome ena gene 2456901 2457512 . + . ID=gene:Rv2193;Name=ctaE;biotype=protein_coding;description=Probable cytochrome C oxidase (subunit III) CtaE;gene_id=Rv2193;logic_name=ena +Chromosome ena gene 2456901 2457512 . + . ID=gene:Rv2193;Name=ctaE;biotype=protein_coding;description=Probable cytochrome C oxidase (subunit III) CtaE;gene_id=Rv2193;logic_name=ena Chromosome ena mRNA 2456901 2457512 . + . ID=transcript:Rv2193;Parent=gene:Rv2193;Name=ctaE-1;biotype=protein_coding;transcript_id=Rv2193 Chromosome ena exon 2456901 2457512 . + . Parent=transcript:Rv2193;Name=Rv2193-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2193-1;rank=1 Chromosome ena CDS 2456901 2457512 . + 0 ID=CDS:Rv2193;Parent=transcript:Rv2193;protein_id=Rv2193 ### -Chromosome ena gene 2457553 2458395 . + . ID=gene:Rv2194;Name=qcrC;biotype=protein_coding;description=Probable ubiquinol-cytochrome C reductase QcrC (cytochrome C subunit);gene_id=Rv2194;logic_name=ena +Chromosome ena gene 2457553 2458395 . + . ID=gene:Rv2194;Name=qcrC;biotype=protein_coding;description=Probable ubiquinol-cytochrome C reductase QcrC (cytochrome C subunit);gene_id=Rv2194;logic_name=ena Chromosome ena mRNA 2457553 2458395 . + . ID=transcript:Rv2194;Parent=gene:Rv2194;Name=qcrC-1;biotype=protein_coding;transcript_id=Rv2194 Chromosome ena exon 2457553 2458395 . + . Parent=transcript:Rv2194;Name=Rv2194-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2194-1;rank=1 Chromosome ena CDS 2457553 2458395 . + 0 ID=CDS:Rv2194;Parent=transcript:Rv2194;protein_id=Rv2194 ### -Chromosome ena gene 2458392 2459681 . + . ID=gene:Rv2195;Name=qcrA;biotype=protein_coding;description=Probable rieske iron-sulfur protein QcrA;gene_id=Rv2195;logic_name=ena +Chromosome ena gene 2458392 2459681 . + . ID=gene:Rv2195;Name=qcrA;biotype=protein_coding;description=Probable rieske iron-sulfur protein QcrA;gene_id=Rv2195;logic_name=ena Chromosome ena mRNA 2458392 2459681 . + . ID=transcript:Rv2195;Parent=gene:Rv2195;Name=qcrA-1;biotype=protein_coding;transcript_id=Rv2195 Chromosome ena exon 2458392 2459681 . + . Parent=transcript:Rv2195;Name=Rv2195-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2195-1;rank=1 Chromosome ena CDS 2458392 2459681 . + 0 ID=CDS:Rv2195;Parent=transcript:Rv2195;protein_id=Rv2195 ### -Chromosome ena gene 2459678 2461327 . + . ID=gene:Rv2196;Name=qcrB;biotype=protein_coding;description=Probable ubiquinol-cytochrome C reductase QcrB (cytochrome B subunit);gene_id=Rv2196;logic_name=ena +Chromosome ena gene 2459678 2461327 . + . ID=gene:Rv2196;Name=qcrB;biotype=protein_coding;description=Probable ubiquinol-cytochrome C reductase QcrB (cytochrome B subunit);gene_id=Rv2196;logic_name=ena Chromosome ena mRNA 2459678 2461327 . + . ID=transcript:Rv2196;Parent=gene:Rv2196;Name=qcrB-1;biotype=protein_coding;transcript_id=Rv2196 Chromosome ena exon 2459678 2461327 . + . Parent=transcript:Rv2196;Name=Rv2196-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2196-1;rank=1 Chromosome ena CDS 2459678 2461327 . + 0 ID=CDS:Rv2196;Parent=transcript:Rv2196;protein_id=Rv2196 ### -Chromosome ena gene 2461504 2462148 . - . ID=gene:Rv2197c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2197c;logic_name=ena +Chromosome ena gene 2461504 2462148 . - . ID=gene:Rv2197c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2197c;logic_name=ena Chromosome ena mRNA 2461504 2462148 . - . ID=transcript:Rv2197c;Parent=gene:Rv2197c;biotype=protein_coding;transcript_id=Rv2197c Chromosome ena exon 2461504 2462148 . - . Parent=transcript:Rv2197c;Name=Rv2197c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2197c-1;rank=1 Chromosome ena CDS 2461504 2462148 . - 0 ID=CDS:Rv2197c;Parent=transcript:Rv2197c;protein_id=Rv2197c ### -Chromosome ena gene 2462148 2463047 . - . ID=gene:Rv2198c;Name=mmpS3;biotype=protein_coding;description=Probable conserved membrane protein MmpS3;gene_id=Rv2198c;logic_name=ena +Chromosome ena gene 2462148 2463047 . - . ID=gene:Rv2198c;Name=mmpS3;biotype=protein_coding;description=Probable conserved membrane protein MmpS3;gene_id=Rv2198c;logic_name=ena Chromosome ena mRNA 2462148 2463047 . - . ID=transcript:Rv2198c;Parent=gene:Rv2198c;Name=mmpS3-1;biotype=protein_coding;transcript_id=Rv2198c Chromosome ena exon 2462148 2463047 . - . Parent=transcript:Rv2198c;Name=Rv2198c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2198c-1;rank=1 Chromosome ena CDS 2462148 2463047 . - 0 ID=CDS:Rv2198c;Parent=transcript:Rv2198c;protein_id=Rv2198c ### -Chromosome ena gene 2463233 2463652 . - . ID=gene:Rv2199c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2199c;logic_name=ena +Chromosome ena gene 2463233 2463652 . - . ID=gene:Rv2199c;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2199c;logic_name=ena Chromosome ena mRNA 2463233 2463652 . - . ID=transcript:Rv2199c;Parent=gene:Rv2199c;biotype=protein_coding;transcript_id=Rv2199c Chromosome ena exon 2463233 2463652 . - . Parent=transcript:Rv2199c;Name=Rv2199c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2199c-1;rank=1 Chromosome ena CDS 2463233 2463652 . - 0 ID=CDS:Rv2199c;Parent=transcript:Rv2199c;protein_id=Rv2199c ### -Chromosome ena gene 2463660 2464751 . - . ID=gene:Rv2200c;Name=ctaC;biotype=protein_coding;description=Probable transmembrane cytochrome C oxidase (subunit II) CtaC;gene_id=Rv2200c;logic_name=ena +Chromosome ena gene 2463660 2464751 . - . ID=gene:Rv2200c;Name=ctaC;biotype=protein_coding;description=Probable transmembrane cytochrome C oxidase (subunit II) CtaC;gene_id=Rv2200c;logic_name=ena Chromosome ena mRNA 2463660 2464751 . - . ID=transcript:Rv2200c;Parent=gene:Rv2200c;Name=ctaC-1;biotype=protein_coding;transcript_id=Rv2200c Chromosome ena exon 2463660 2464751 . - . Parent=transcript:Rv2200c;Name=Rv2200c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2200c-1;rank=1 Chromosome ena CDS 2463660 2464751 . - 0 ID=CDS:Rv2200c;Parent=transcript:Rv2200c;protein_id=Rv2200c ### -Chromosome ena gene 2464997 2466955 . + . ID=gene:Rv2201;Name=asnB;biotype=protein_coding;description=Probable asparagine synthetase AsnB;gene_id=Rv2201;logic_name=ena +Chromosome ena gene 2464997 2466955 . + . ID=gene:Rv2201;Name=asnB;biotype=protein_coding;description=Probable asparagine synthetase AsnB;gene_id=Rv2201;logic_name=ena Chromosome ena mRNA 2464997 2466955 . + . ID=transcript:Rv2201;Parent=gene:Rv2201;Name=asnB-1;biotype=protein_coding;transcript_id=Rv2201 Chromosome ena exon 2464997 2466955 . + . Parent=transcript:Rv2201;Name=Rv2201-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2201-1;rank=1 Chromosome ena CDS 2464997 2466955 . + 0 ID=CDS:Rv2201;Parent=transcript:Rv2201;protein_id=Rv2201 ### -Chromosome ena gene 2467053 2468027 . - . ID=gene:Rv2202c;Name=adoK;biotype=protein_coding;description=Adenosine kinase;gene_id=Rv2202c;logic_name=ena +Chromosome ena gene 2467053 2468027 . - . ID=gene:Rv2202c;Name=adoK;biotype=protein_coding;description=Adenosine kinase;gene_id=Rv2202c;logic_name=ena Chromosome ena mRNA 2467053 2468027 . - . ID=transcript:Rv2202c;Parent=gene:Rv2202c;Name=adoK-1;biotype=protein_coding;transcript_id=Rv2202c Chromosome ena exon 2467053 2468027 . - . Parent=transcript:Rv2202c;Name=Rv2202c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2202c-1;rank=1 Chromosome ena CDS 2467053 2468027 . - 0 ID=CDS:Rv2202c;Parent=transcript:Rv2202c;protein_id=Rv2202c ### -Chromosome ena gene 2468231 2468923 . + . ID=gene:Rv2203;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2203;logic_name=ena +Chromosome ena gene 2468231 2468923 . + . ID=gene:Rv2203;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2203;logic_name=ena Chromosome ena mRNA 2468231 2468923 . + . ID=transcript:Rv2203;Parent=gene:Rv2203;biotype=protein_coding;transcript_id=Rv2203 Chromosome ena exon 2468231 2468923 . + . Parent=transcript:Rv2203;Name=Rv2203-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2203-1;rank=1 Chromosome ena CDS 2468231 2468923 . + 0 ID=CDS:Rv2203;Parent=transcript:Rv2203;protein_id=Rv2203 ### -Chromosome ena gene 2468931 2469287 . - . ID=gene:Rv2204c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2204c;logic_name=ena +Chromosome ena gene 2468931 2469287 . - . ID=gene:Rv2204c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2204c;logic_name=ena Chromosome ena mRNA 2468931 2469287 . - . ID=transcript:Rv2204c;Parent=gene:Rv2204c;biotype=protein_coding;transcript_id=Rv2204c Chromosome ena exon 2468931 2469287 . - . Parent=transcript:Rv2204c;Name=Rv2204c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2204c-1;rank=1 Chromosome ena CDS 2468931 2469287 . - 0 ID=CDS:Rv2204c;Parent=transcript:Rv2204c;protein_id=Rv2204c ### -Chromosome ena gene 2469387 2470463 . - . ID=gene:Rv2205c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2205c;logic_name=ena +Chromosome ena gene 2469387 2470463 . - . ID=gene:Rv2205c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2205c;logic_name=ena Chromosome ena mRNA 2469387 2470463 . - . ID=transcript:Rv2205c;Parent=gene:Rv2205c;biotype=protein_coding;transcript_id=Rv2205c Chromosome ena exon 2469387 2470463 . - . Parent=transcript:Rv2205c;Name=Rv2205c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2205c-1;rank=1 Chromosome ena CDS 2469387 2470463 . - 0 ID=CDS:Rv2205c;Parent=transcript:Rv2205c;protein_id=Rv2205c ### -Chromosome ena gene 2470622 2471332 . + . ID=gene:Rv2206;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2206;logic_name=ena +Chromosome ena gene 2470622 2471332 . + . ID=gene:Rv2206;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2206;logic_name=ena Chromosome ena mRNA 2470622 2471332 . + . ID=transcript:Rv2206;Parent=gene:Rv2206;biotype=protein_coding;transcript_id=Rv2206 Chromosome ena exon 2470622 2471332 . + . Parent=transcript:Rv2206;Name=Rv2206-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2206-1;rank=1 Chromosome ena CDS 2470622 2471332 . + 0 ID=CDS:Rv2206;Parent=transcript:Rv2206;protein_id=Rv2206 ### -Chromosome ena gene 2471411 2472496 . + . ID=gene:Rv2207;Name=cobT;biotype=protein_coding;description=Probable nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT;gene_id=Rv2207;logic_name=ena +Chromosome ena gene 2471411 2472496 . + . ID=gene:Rv2207;Name=cobT;biotype=protein_coding;description=Probable nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT;gene_id=Rv2207;logic_name=ena Chromosome ena mRNA 2471411 2472496 . + . ID=transcript:Rv2207;Parent=gene:Rv2207;Name=cobT-1;biotype=protein_coding;transcript_id=Rv2207 Chromosome ena exon 2471411 2472496 . + . Parent=transcript:Rv2207;Name=Rv2207-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2207-1;rank=1 Chromosome ena CDS 2471411 2472496 . + 0 ID=CDS:Rv2207;Parent=transcript:Rv2207;protein_id=Rv2207 ### -Chromosome ena gene 2472493 2473242 . + . ID=gene:Rv2208;Name=cobS;biotype=protein_coding;description=Probable cobalamin 5'-phosphate synthase CobS;gene_id=Rv2208;logic_name=ena +Chromosome ena gene 2472493 2473242 . + . ID=gene:Rv2208;Name=cobS;biotype=protein_coding;description=Probable cobalamin 5'-phosphate synthase CobS;gene_id=Rv2208;logic_name=ena Chromosome ena mRNA 2472493 2473242 . + . ID=transcript:Rv2208;Parent=gene:Rv2208;Name=cobS-1;biotype=protein_coding;transcript_id=Rv2208 Chromosome ena exon 2472493 2473242 . + . Parent=transcript:Rv2208;Name=Rv2208-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2208-1;rank=1 Chromosome ena CDS 2472493 2473242 . + 0 ID=CDS:Rv2208;Parent=transcript:Rv2208;protein_id=Rv2208 ### -Chromosome ena gene 2473400 2474938 . + . ID=gene:Rv2209;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2209;logic_name=ena +Chromosome ena gene 2473400 2474938 . + . ID=gene:Rv2209;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2209;logic_name=ena Chromosome ena mRNA 2473400 2474938 . + . ID=transcript:Rv2209;Parent=gene:Rv2209;biotype=protein_coding;transcript_id=Rv2209 Chromosome ena exon 2473400 2474938 . + . Parent=transcript:Rv2209;Name=Rv2209-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2209-1;rank=1 Chromosome ena CDS 2473400 2474938 . + 0 ID=CDS:Rv2209;Parent=transcript:Rv2209;protein_id=Rv2209 ### -Chromosome ena gene 2474864 2475970 . - . ID=gene:Rv2210c;Name=ilvE;biotype=protein_coding;description=Branched-chain amino acid transaminase IlvE;gene_id=Rv2210c;logic_name=ena +Chromosome ena gene 2474864 2475970 . - . ID=gene:Rv2210c;Name=ilvE;biotype=protein_coding;description=Branched-chain amino acid transaminase IlvE;gene_id=Rv2210c;logic_name=ena Chromosome ena mRNA 2474864 2475970 . - . ID=transcript:Rv2210c;Parent=gene:Rv2210c;Name=ilvE-1;biotype=protein_coding;transcript_id=Rv2210c Chromosome ena exon 2474864 2475970 . - . Parent=transcript:Rv2210c;Name=Rv2210c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2210c-1;rank=1 Chromosome ena CDS 2474864 2475970 . - 0 ID=CDS:Rv2210c;Parent=transcript:Rv2210c;protein_id=Rv2210c ### -Chromosome ena gene 2476042 2477181 . - . ID=gene:Rv2211c;Name=gcvT;biotype=protein_coding;description=Probable aminomethyltransferase GcvT (glycine cleavage system T protein);gene_id=Rv2211c;logic_name=ena +Chromosome ena gene 2476042 2477181 . - . ID=gene:Rv2211c;Name=gcvT;biotype=protein_coding;description=Probable aminomethyltransferase GcvT (glycine cleavage system T protein);gene_id=Rv2211c;logic_name=ena Chromosome ena mRNA 2476042 2477181 . - . ID=transcript:Rv2211c;Parent=gene:Rv2211c;Name=gcvT-1;biotype=protein_coding;transcript_id=Rv2211c Chromosome ena exon 2476042 2477181 . - . Parent=transcript:Rv2211c;Name=Rv2211c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2211c-1;rank=1 Chromosome ena CDS 2476042 2477181 . - 0 ID=CDS:Rv2211c;Parent=transcript:Rv2211c;protein_id=Rv2211c ### -Chromosome ena gene 2477190 2478326 . + . ID=gene:Rv2212;biotype=protein_coding;description=Adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv2212;logic_name=ena +Chromosome ena gene 2477190 2478326 . + . ID=gene:Rv2212;biotype=protein_coding;description=Adenylyl cyclase (ATP pyrophosphate-lyase) (adenylate cyclase);gene_id=Rv2212;logic_name=ena Chromosome ena mRNA 2477190 2478326 . + . ID=transcript:Rv2212;Parent=gene:Rv2212;biotype=protein_coding;transcript_id=Rv2212 Chromosome ena exon 2477190 2478326 . + . Parent=transcript:Rv2212;Name=Rv2212-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2212-1;rank=1 Chromosome ena CDS 2477190 2478326 . + 0 ID=CDS:Rv2212;Parent=transcript:Rv2212;protein_id=Rv2212 ### -Chromosome ena gene 2478338 2479885 . + . ID=gene:Rv2213;Name=pepB;biotype=protein_coding;description=Probable aminopeptidase PepB;gene_id=Rv2213;logic_name=ena +Chromosome ena gene 2478338 2479885 . + . ID=gene:Rv2213;Name=pepB;biotype=protein_coding;description=Probable aminopeptidase PepB;gene_id=Rv2213;logic_name=ena Chromosome ena mRNA 2478338 2479885 . + . ID=transcript:Rv2213;Parent=gene:Rv2213;Name=pepB-1;biotype=protein_coding;transcript_id=Rv2213 Chromosome ena exon 2478338 2479885 . + . Parent=transcript:Rv2213;Name=Rv2213-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2213-1;rank=1 Chromosome ena CDS 2478338 2479885 . + 0 ID=CDS:Rv2213;Parent=transcript:Rv2213;protein_id=Rv2213 ### -Chromosome ena gene 2479923 2481701 . - . ID=gene:Rv2214c;Name=ephD;biotype=protein_coding;description=Possible short-chain dehydrogenase EphD;gene_id=Rv2214c;logic_name=ena +Chromosome ena gene 2479923 2481701 . - . ID=gene:Rv2214c;Name=ephD;biotype=protein_coding;description=Possible short-chain dehydrogenase EphD;gene_id=Rv2214c;logic_name=ena Chromosome ena mRNA 2479923 2481701 . - . ID=transcript:Rv2214c;Parent=gene:Rv2214c;Name=ephD-1;biotype=protein_coding;transcript_id=Rv2214c Chromosome ena exon 2479923 2481701 . - . Parent=transcript:Rv2214c;Name=Rv2214c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2214c-1;rank=1 Chromosome ena CDS 2479923 2481701 . - 0 ID=CDS:Rv2214c;Parent=transcript:Rv2214c;protein_id=Rv2214c ### -Chromosome ena gene 2481965 2483626 . + . ID=gene:Rv2215;Name=dlaT;biotype=protein_coding;description=DlaT%2C dihydrolipoamide acyltransferase%2C E2 component of pyruvate dehydrogenase;gene_id=Rv2215;logic_name=ena +Chromosome ena gene 2481965 2483626 . + . ID=gene:Rv2215;Name=dlaT;biotype=protein_coding;description=DlaT%2C dihydrolipoamide acyltransferase%2C E2 component of pyruvate dehydrogenase;gene_id=Rv2215;logic_name=ena Chromosome ena mRNA 2481965 2483626 . + . ID=transcript:Rv2215;Parent=gene:Rv2215;Name=dlaT-1;biotype=protein_coding;transcript_id=Rv2215 Chromosome ena exon 2481965 2483626 . + . Parent=transcript:Rv2215;Name=Rv2215-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2215-1;rank=1 Chromosome ena CDS 2481965 2483626 . + 0 ID=CDS:Rv2215;Parent=transcript:Rv2215;protein_id=Rv2215 ### -Chromosome ena gene 2483626 2484531 . + . ID=gene:Rv2216;biotype=protein_coding;description=Conserved protein;gene_id=Rv2216;logic_name=ena +Chromosome ena gene 2483626 2484531 . + . ID=gene:Rv2216;biotype=protein_coding;description=Conserved protein;gene_id=Rv2216;logic_name=ena Chromosome ena mRNA 2483626 2484531 . + . ID=transcript:Rv2216;Parent=gene:Rv2216;biotype=protein_coding;transcript_id=Rv2216 Chromosome ena exon 2483626 2484531 . + . Parent=transcript:Rv2216;Name=Rv2216-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2216-1;rank=1 Chromosome ena CDS 2483626 2484531 . + 0 ID=CDS:Rv2216;Parent=transcript:Rv2216;protein_id=Rv2216 ### -Chromosome ena gene 2484584 2485276 . + . ID=gene:Rv2217;Name=lipB;biotype=protein_coding;description=Probable lipoate biosynthesis protein B LipB;gene_id=Rv2217;logic_name=ena +Chromosome ena gene 2484584 2485276 . + . ID=gene:Rv2217;Name=lipB;biotype=protein_coding;description=Probable lipoate biosynthesis protein B LipB;gene_id=Rv2217;logic_name=ena Chromosome ena mRNA 2484584 2485276 . + . ID=transcript:Rv2217;Parent=gene:Rv2217;Name=lipB-1;biotype=protein_coding;transcript_id=Rv2217 Chromosome ena exon 2484584 2485276 . + . Parent=transcript:Rv2217;Name=Rv2217-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2217-1;rank=1 Chromosome ena CDS 2484584 2485276 . + 0 ID=CDS:Rv2217;Parent=transcript:Rv2217;protein_id=Rv2217 ### -Chromosome ena gene 2485273 2486208 . + . ID=gene:Rv2218;Name=lipA;biotype=protein_coding;description=Probable lipoate biosynthesis protein A LipA;gene_id=Rv2218;logic_name=ena +Chromosome ena gene 2485273 2486208 . + . ID=gene:Rv2218;Name=lipA;biotype=protein_coding;description=Probable lipoate biosynthesis protein A LipA;gene_id=Rv2218;logic_name=ena Chromosome ena mRNA 2485273 2486208 . + . ID=transcript:Rv2218;Parent=gene:Rv2218;Name=lipA-1;biotype=protein_coding;transcript_id=Rv2218 Chromosome ena exon 2485273 2486208 . + . Parent=transcript:Rv2218;Name=Rv2218-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2218-1;rank=1 Chromosome ena CDS 2485273 2486208 . + 0 ID=CDS:Rv2218;Parent=transcript:Rv2218;protein_id=Rv2218 ### -Chromosome ena gene 2486235 2486987 . + . ID=gene:Rv2219;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2219;logic_name=ena +Chromosome ena gene 2486235 2486987 . + . ID=gene:Rv2219;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2219;logic_name=ena Chromosome ena mRNA 2486235 2486987 . + . ID=transcript:Rv2219;Parent=gene:Rv2219;biotype=protein_coding;transcript_id=Rv2219 Chromosome ena exon 2486235 2486987 . + . Parent=transcript:Rv2219;Name=Rv2219-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2219-1;rank=1 Chromosome ena CDS 2486235 2486987 . + 0 ID=CDS:Rv2219;Parent=transcript:Rv2219;protein_id=Rv2219 ### -Chromosome ena gene 2486994 2487416 . - . ID=gene:Rv2219A;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2219A;logic_name=ena +Chromosome ena gene 2486994 2487416 . - . ID=gene:Rv2219A;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2219A;logic_name=ena Chromosome ena mRNA 2486994 2487416 . - . ID=transcript:Rv2219A;Parent=gene:Rv2219A;biotype=protein_coding;transcript_id=Rv2219A Chromosome ena exon 2486994 2487416 . - . Parent=transcript:Rv2219A;Name=Rv2219A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2219A-1;rank=1 Chromosome ena CDS 2486994 2487416 . - 0 ID=CDS:Rv2219A;Parent=transcript:Rv2219A;protein_id=Rv2219A ### -Chromosome ena gene 2487615 2489051 . + . ID=gene:Rv2220;Name=glnA1;biotype=protein_coding;description=Glutamine synthetase GlnA1 (glutamine synthase) (GS-I);gene_id=Rv2220;logic_name=ena +Chromosome ena gene 2487615 2489051 . + . ID=gene:Rv2220;Name=glnA1;biotype=protein_coding;description=Glutamine synthetase GlnA1 (glutamine synthase) (GS-I);gene_id=Rv2220;logic_name=ena Chromosome ena mRNA 2487615 2489051 . + . ID=transcript:Rv2220;Parent=gene:Rv2220;Name=glnA1-1;biotype=protein_coding;transcript_id=Rv2220 Chromosome ena exon 2487615 2489051 . + . Parent=transcript:Rv2220;Name=Rv2220-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2220-1;rank=1 Chromosome ena CDS 2487615 2489051 . + 0 ID=CDS:Rv2220;Parent=transcript:Rv2220;protein_id=Rv2220 ### -Chromosome ena gene 2489369 2492353 . - . ID=gene:Rv2221c;Name=glnE;biotype=protein_coding;description=Glutamate-ammonia-ligase adenylyltransferase GlnE (glutamine-synthetase adenylyltransferase);gene_id=Rv2221c;logic_name=ena +Chromosome ena gene 2489369 2492353 . - . ID=gene:Rv2221c;Name=glnE;biotype=protein_coding;description=Glutamate-ammonia-ligase adenylyltransferase GlnE (glutamine-synthetase adenylyltransferase);gene_id=Rv2221c;logic_name=ena Chromosome ena mRNA 2489369 2492353 . - . ID=transcript:Rv2221c;Parent=gene:Rv2221c;Name=glnE-1;biotype=protein_coding;transcript_id=Rv2221c Chromosome ena exon 2489369 2492353 . - . Parent=transcript:Rv2221c;Name=Rv2221c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2221c-1;rank=1 Chromosome ena CDS 2489369 2492353 . - 0 ID=CDS:Rv2221c;Parent=transcript:Rv2221c;protein_id=Rv2221c ### -Chromosome ena gene 2492402 2493742 . - . ID=gene:Rv2222c;Name=glnA2;biotype=protein_coding;description=Probable glutamine synthetase GlnA2 (glutamine synthase) (GS-II);gene_id=Rv2222c;logic_name=ena +Chromosome ena gene 2492402 2493742 . - . ID=gene:Rv2222c;Name=glnA2;biotype=protein_coding;description=Probable glutamine synthetase GlnA2 (glutamine synthase) (GS-II);gene_id=Rv2222c;logic_name=ena Chromosome ena mRNA 2492402 2493742 . - . ID=transcript:Rv2222c;Parent=gene:Rv2222c;Name=glnA2-1;biotype=protein_coding;transcript_id=Rv2222c Chromosome ena exon 2492402 2493742 . - . Parent=transcript:Rv2222c;Name=Rv2222c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2222c-1;rank=1 Chromosome ena CDS 2492402 2493742 . - 0 ID=CDS:Rv2222c;Parent=transcript:Rv2222c;protein_id=Rv2222c ### -Chromosome ena gene 2493837 2495399 . - . ID=gene:Rv2223c;biotype=protein_coding;description=Probable exported protease;gene_id=Rv2223c;logic_name=ena +Chromosome ena gene 2493837 2495399 . - . ID=gene:Rv2223c;biotype=protein_coding;description=Probable exported protease;gene_id=Rv2223c;logic_name=ena Chromosome ena mRNA 2493837 2495399 . - . ID=transcript:Rv2223c;Parent=gene:Rv2223c;biotype=protein_coding;transcript_id=Rv2223c Chromosome ena exon 2493837 2495399 . - . Parent=transcript:Rv2223c;Name=Rv2223c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2223c-1;rank=1 Chromosome ena CDS 2493837 2495399 . - 0 ID=CDS:Rv2223c;Parent=transcript:Rv2223c;protein_id=Rv2223c ### -Chromosome ena gene 2495461 2497023 . - . ID=gene:Rv2224c;Name=caeA;biotype=protein_coding;description=Probable carboxylesterase CaeA;gene_id=Rv2224c;logic_name=ena +Chromosome ena gene 2495461 2497023 . - . ID=gene:Rv2224c;Name=caeA;biotype=protein_coding;description=Probable carboxylesterase CaeA;gene_id=Rv2224c;logic_name=ena Chromosome ena mRNA 2495461 2497023 . - . ID=transcript:Rv2224c;Parent=gene:Rv2224c;Name=caeA-1;biotype=protein_coding;transcript_id=Rv2224c Chromosome ena exon 2495461 2497023 . - . Parent=transcript:Rv2224c;Name=Rv2224c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2224c-1;rank=1 Chromosome ena CDS 2495461 2497023 . - 0 ID=CDS:Rv2224c;Parent=transcript:Rv2224c;protein_id=Rv2224c ### -Chromosome ena gene 2497742 2498587 . + . ID=gene:Rv2225;Name=panB;biotype=protein_coding;description=3-methyl-2-oxobutanoate hydroxymethyltransferase PanB;gene_id=Rv2225;logic_name=ena +Chromosome ena gene 2497742 2498587 . + . ID=gene:Rv2225;Name=panB;biotype=protein_coding;description=3-methyl-2-oxobutanoate hydroxymethyltransferase PanB;gene_id=Rv2225;logic_name=ena Chromosome ena mRNA 2497742 2498587 . + . ID=transcript:Rv2225;Parent=gene:Rv2225;Name=panB-1;biotype=protein_coding;transcript_id=Rv2225 Chromosome ena exon 2497742 2498587 . + . Parent=transcript:Rv2225;Name=Rv2225-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2225-1;rank=1 Chromosome ena CDS 2497742 2498587 . + 0 ID=CDS:Rv2225;Parent=transcript:Rv2225;protein_id=Rv2225 ### -Chromosome ena gene 2498832 2500373 . + . ID=gene:Rv2226;biotype=protein_coding;description=Conserved protein;gene_id=Rv2226;logic_name=ena +Chromosome ena gene 2498832 2500373 . + . ID=gene:Rv2226;biotype=protein_coding;description=Conserved protein;gene_id=Rv2226;logic_name=ena Chromosome ena mRNA 2498832 2500373 . + . ID=transcript:Rv2226;Parent=gene:Rv2226;biotype=protein_coding;transcript_id=Rv2226 Chromosome ena exon 2498832 2500373 . + . Parent=transcript:Rv2226;Name=Rv2226-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2226-1;rank=1 Chromosome ena CDS 2498832 2500373 . + 0 ID=CDS:Rv2226;Parent=transcript:Rv2226;protein_id=Rv2226 ### Chromosome ena_gene biological_region 2500445 2500751 . - . external_name=AL123456.3:gene:complement(2500445..2500751);logic_name=ena_gene -Chromosome ena_misc_rna biological_region 2500445 2500751 . - . external_name=rnpB%2C rna component of RNase P.;logic_name=ena_misc_rna -Chromosome ena gene 2500931 2501632 . + . ID=gene:Rv2227;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2227;logic_name=ena +Chromosome ena_misc_rna biological_region 2500445 2500751 . - . external_name=rnpB%2C rna component of RNase P.;logic_name=ena_misc_rna +Chromosome ena gene 2500931 2501632 . + . ID=gene:Rv2227;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2227;logic_name=ena Chromosome ena mRNA 2500931 2501632 . + . ID=transcript:Rv2227;Parent=gene:Rv2227;biotype=protein_coding;transcript_id=Rv2227 Chromosome ena exon 2500931 2501632 . + . Parent=transcript:Rv2227;Name=Rv2227-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2227-1;rank=1 Chromosome ena CDS 2500931 2501632 . + 0 ID=CDS:Rv2227;Parent=transcript:Rv2227;protein_id=Rv2227 ### -Chromosome ena gene 2501644 2502738 . - . ID=gene:Rv2228c;biotype=protein_coding;description=Multifunctional protein. Has RNASE H%2Calpha-ribazole phosphatase%2C and acid phosphatase activities.;gene_id=Rv2228c;logic_name=ena +Chromosome ena gene 2501644 2502738 . - . ID=gene:Rv2228c;biotype=protein_coding;description=Multifunctional protein. Has RNASE H%2Calpha-ribazole phosphatase%2C and acid phosphatase activities.;gene_id=Rv2228c;logic_name=ena Chromosome ena mRNA 2501644 2502738 . - . ID=transcript:Rv2228c;Parent=gene:Rv2228c;biotype=protein_coding;transcript_id=Rv2228c Chromosome ena exon 2501644 2502738 . - . Parent=transcript:Rv2228c;Name=Rv2228c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2228c-1;rank=1 Chromosome ena CDS 2501644 2502738 . - 0 ID=CDS:Rv2228c;Parent=transcript:Rv2228c;protein_id=Rv2228c ### -Chromosome ena gene 2502735 2503472 . - . ID=gene:Rv2229c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2229c;logic_name=ena +Chromosome ena gene 2502735 2503472 . - . ID=gene:Rv2229c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2229c;logic_name=ena Chromosome ena mRNA 2502735 2503472 . - . ID=transcript:Rv2229c;Parent=gene:Rv2229c;biotype=protein_coding;transcript_id=Rv2229c Chromosome ena exon 2502735 2503472 . - . Parent=transcript:Rv2229c;Name=Rv2229c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2229c-1;rank=1 Chromosome ena CDS 2502735 2503472 . - 0 ID=CDS:Rv2229c;Parent=transcript:Rv2229c;protein_id=Rv2229c ### -Chromosome ena gene 2503469 2504608 . - . ID=gene:Rv2230c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2230c;logic_name=ena +Chromosome ena gene 2503469 2504608 . - . ID=gene:Rv2230c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2230c;logic_name=ena Chromosome ena mRNA 2503469 2504608 . - . ID=transcript:Rv2230c;Parent=gene:Rv2230c;biotype=protein_coding;transcript_id=Rv2230c Chromosome ena exon 2503469 2504608 . - . Parent=transcript:Rv2230c;Name=Rv2230c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2230c-1;rank=1 Chromosome ena CDS 2503469 2504608 . - 0 ID=CDS:Rv2230c;Parent=transcript:Rv2230c;protein_id=Rv2230c ### -Chromosome ena gene 2504605 2505699 . - . ID=gene:Rv2231c;Name=cobC;biotype=protein_coding;description=Possible aminotransferase CobC;gene_id=Rv2231c;logic_name=ena +Chromosome ena gene 2504605 2505699 . - . ID=gene:Rv2231c;Name=cobC;biotype=protein_coding;description=Possible aminotransferase CobC;gene_id=Rv2231c;logic_name=ena Chromosome ena mRNA 2504605 2505699 . - . ID=transcript:Rv2231c;Parent=gene:Rv2231c;Name=cobC-1;biotype=protein_coding;transcript_id=Rv2231c Chromosome ena exon 2504605 2505699 . - . Parent=transcript:Rv2231c;Name=Rv2231c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2231c-1;rank=1 Chromosome ena CDS 2504605 2505699 . - 0 ID=CDS:Rv2231c;Parent=transcript:Rv2231c;protein_id=Rv2231c ### -Chromosome ena gene 2505736 2506161 . - . ID=gene:Rv2231A;Name=vapC16;biotype=protein_coding;description=Possible toxin VapC16;gene_id=Rv2231A;logic_name=ena +Chromosome ena gene 2505736 2506161 . - . ID=gene:Rv2231A;Name=vapC16;biotype=protein_coding;description=Possible toxin VapC16;gene_id=Rv2231A;logic_name=ena Chromosome ena mRNA 2505736 2506161 . - . ID=transcript:Rv2231A;Parent=gene:Rv2231A;Name=vapC16-1;biotype=protein_coding;transcript_id=Rv2231A Chromosome ena exon 2505736 2506161 . - . Parent=transcript:Rv2231A;Name=Rv2231A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2231A-1;rank=1 Chromosome ena CDS 2505736 2506161 . - 0 ID=CDS:Rv2231A;Parent=transcript:Rv2231A;protein_id=Rv2231A ### -Chromosome ena gene 2506207 2506383 . - . ID=gene:Rv2231B;Name=vapB16;biotype=protein_coding;description=Possible antitoxin VapB16;gene_id=Rv2231B;logic_name=ena +Chromosome ena gene 2506207 2506383 . - . ID=gene:Rv2231B;Name=vapB16;biotype=protein_coding;description=Possible antitoxin VapB16;gene_id=Rv2231B;logic_name=ena Chromosome ena mRNA 2506207 2506383 . - . ID=transcript:Rv2231B;Parent=gene:Rv2231B;Name=vapB16-1;biotype=protein_coding;transcript_id=Rv2231B Chromosome ena exon 2506207 2506383 . - . Parent=transcript:Rv2231B;Name=Rv2231B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2231B-1;rank=1 Chromosome ena CDS 2506207 2506383 . - 0 ID=CDS:Rv2231B;Parent=transcript:Rv2231B;protein_id=Rv2231B ### -Chromosome ena gene 2506278 2507153 . + . ID=gene:Rv2232;Name=ptkA;biotype=protein_coding;description=Protein tyrosine kinase transcriptional regulatory protein PtkA;gene_id=Rv2232;logic_name=ena +Chromosome ena gene 2506278 2507153 . + . ID=gene:Rv2232;Name=ptkA;biotype=protein_coding;description=Protein tyrosine kinase transcriptional regulatory protein PtkA;gene_id=Rv2232;logic_name=ena Chromosome ena mRNA 2506278 2507153 . + . ID=transcript:Rv2232;Parent=gene:Rv2232;Name=ptkA-1;biotype=protein_coding;transcript_id=Rv2232 Chromosome ena exon 2506278 2507153 . + . Parent=transcript:Rv2232;Name=Rv2232-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2232-1;rank=1 Chromosome ena CDS 2506278 2507153 . + 0 ID=CDS:Rv2232;Parent=transcript:Rv2232;protein_id=Rv2232 ### -Chromosome ena gene 2507146 2507637 . + . ID=gene:Rv2234;Name=ptpA;biotype=protein_coding;description=Phosphotyrosine protein phosphatase PtpA (protein-tyrosine-phosphatase) (PTPase) (LMW phosphatase);gene_id=Rv2234;logic_name=ena +Chromosome ena gene 2507146 2507637 . + . ID=gene:Rv2234;Name=ptpA;biotype=protein_coding;description=Phosphotyrosine protein phosphatase PtpA (protein-tyrosine-phosphatase) (PTPase) (LMW phosphatase);gene_id=Rv2234;logic_name=ena Chromosome ena mRNA 2507146 2507637 . + . ID=transcript:Rv2234;Parent=gene:Rv2234;Name=ptpA-1;biotype=protein_coding;transcript_id=Rv2234 Chromosome ena exon 2507146 2507637 . + . Parent=transcript:Rv2234;Name=Rv2234-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2234-1;rank=1 Chromosome ena CDS 2507146 2507637 . + 0 ID=CDS:Rv2234;Parent=transcript:Rv2234;protein_id=Rv2234 ### -Chromosome ena gene 2507637 2508452 . + . ID=gene:Rv2235;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2235;logic_name=ena +Chromosome ena gene 2507637 2508452 . + . ID=gene:Rv2235;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2235;logic_name=ena Chromosome ena mRNA 2507637 2508452 . + . ID=transcript:Rv2235;Parent=gene:Rv2235;biotype=protein_coding;transcript_id=Rv2235 Chromosome ena exon 2507637 2508452 . + . Parent=transcript:Rv2235;Name=Rv2235-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2235-1;rank=1 Chromosome ena CDS 2507637 2508452 . + 0 ID=CDS:Rv2235;Parent=transcript:Rv2235;protein_id=Rv2235 ### -Chromosome ena gene 2508434 2509375 . - . ID=gene:Rv2236c;Name=cobD;biotype=protein_coding;description=Probable cobalamin biosynthesis transmembrane protein CobD;gene_id=Rv2236c;logic_name=ena +Chromosome ena gene 2508434 2509375 . - . ID=gene:Rv2236c;Name=cobD;biotype=protein_coding;description=Probable cobalamin biosynthesis transmembrane protein CobD;gene_id=Rv2236c;logic_name=ena Chromosome ena mRNA 2508434 2509375 . - . ID=transcript:Rv2236c;Parent=gene:Rv2236c;Name=cobD-1;biotype=protein_coding;transcript_id=Rv2236c Chromosome ena exon 2508434 2509375 . - . Parent=transcript:Rv2236c;Name=Rv2236c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2236c-1;rank=1 Chromosome ena CDS 2508434 2509375 . - 0 ID=CDS:Rv2236c;Parent=transcript:Rv2236c;protein_id=Rv2236c ### -Chromosome ena gene 2509489 2510256 . + . ID=gene:Rv2237;biotype=protein_coding;description=Conserved protein;gene_id=Rv2237;logic_name=ena +Chromosome ena gene 2509489 2510256 . + . ID=gene:Rv2237;biotype=protein_coding;description=Conserved protein;gene_id=Rv2237;logic_name=ena Chromosome ena mRNA 2509489 2510256 . + . ID=transcript:Rv2237;Parent=gene:Rv2237;biotype=protein_coding;transcript_id=Rv2237 Chromosome ena exon 2509489 2510256 . + . Parent=transcript:Rv2237;Name=Rv2237-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2237-1;rank=1 Chromosome ena CDS 2509489 2510256 . + 0 ID=CDS:Rv2237;Parent=transcript:Rv2237;protein_id=Rv2237 ### -Chromosome ena gene 2510351 2510587 . - . ID=gene:Rv2237A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2237A;logic_name=ena +Chromosome ena gene 2510351 2510587 . - . ID=gene:Rv2237A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2237A;logic_name=ena Chromosome ena mRNA 2510351 2510587 . - . ID=transcript:Rv2237A;Parent=gene:Rv2237A;biotype=protein_coding;transcript_id=Rv2237A Chromosome ena exon 2510351 2510587 . - . Parent=transcript:Rv2237A;Name=Rv2237A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2237A-1;rank=1 Chromosome ena CDS 2510351 2510587 . - 0 ID=CDS:Rv2237A;Parent=transcript:Rv2237A;protein_id=Rv2237A @@ -11725,32 +11725,32 @@ Chromosome ena transcript 2510598 2510669 . - . ID=transcript:EBG00000313315;Par Chromosome ena exon 2510598 2510669 . - . Parent=transcript:EBG00000313315;Name=EBG00000313315;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313315;rank=1 ### Chromosome ena_gene biological_region 2510598 2510669 . - . external_name=AL123456.3:gene:complement(2510598..2510669);logic_name=ena_gene -Chromosome ena gene 2510715 2511176 . - . ID=gene:Rv2238c;Name=ahpE;biotype=protein_coding;description=Probable peroxiredoxin AhpE;gene_id=Rv2238c;logic_name=ena +Chromosome ena gene 2510715 2511176 . - . ID=gene:Rv2238c;Name=ahpE;biotype=protein_coding;description=Probable peroxiredoxin AhpE;gene_id=Rv2238c;logic_name=ena Chromosome ena mRNA 2510715 2511176 . - . ID=transcript:Rv2238c;Parent=gene:Rv2238c;Name=ahpE-1;biotype=protein_coding;transcript_id=Rv2238c Chromosome ena exon 2510715 2511176 . - . Parent=transcript:Rv2238c;Name=Rv2238c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2238c-1;rank=1 Chromosome ena CDS 2510715 2511176 . - 0 ID=CDS:Rv2238c;Parent=transcript:Rv2238c;protein_id=Rv2238c ### -Chromosome ena gene 2511176 2511652 . - . ID=gene:Rv2239c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2239c;logic_name=ena +Chromosome ena gene 2511176 2511652 . - . ID=gene:Rv2239c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2239c;logic_name=ena Chromosome ena mRNA 2511176 2511652 . - . ID=transcript:Rv2239c;Parent=gene:Rv2239c;biotype=protein_coding;transcript_id=Rv2239c Chromosome ena exon 2511176 2511652 . - . Parent=transcript:Rv2239c;Name=Rv2239c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2239c-1;rank=1 Chromosome ena CDS 2511176 2511652 . - 0 ID=CDS:Rv2239c;Parent=transcript:Rv2239c;protein_id=Rv2239c ### -Chromosome ena gene 2511690 2512280 . - . ID=gene:Rv2240c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2240c;logic_name=ena +Chromosome ena gene 2511690 2512280 . - . ID=gene:Rv2240c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2240c;logic_name=ena Chromosome ena mRNA 2511690 2512280 . - . ID=transcript:Rv2240c;Parent=gene:Rv2240c;biotype=protein_coding;transcript_id=Rv2240c Chromosome ena exon 2511690 2512280 . - . Parent=transcript:Rv2240c;Name=Rv2240c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2240c-1;rank=1 Chromosome ena CDS 2511690 2512280 . - 0 ID=CDS:Rv2240c;Parent=transcript:Rv2240c;protein_id=Rv2240c ### -Chromosome ena gene 2512539 2515244 . + . ID=gene:Rv2241;Name=aceE;biotype=protein_coding;description=Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase);gene_id=Rv2241;logic_name=ena +Chromosome ena gene 2512539 2515244 . + . ID=gene:Rv2241;Name=aceE;biotype=protein_coding;description=Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase);gene_id=Rv2241;logic_name=ena Chromosome ena mRNA 2512539 2515244 . + . ID=transcript:Rv2241;Parent=gene:Rv2241;Name=aceE-1;biotype=protein_coding;transcript_id=Rv2241 Chromosome ena exon 2512539 2515244 . + . Parent=transcript:Rv2241;Name=Rv2241-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2241-1;rank=1 Chromosome ena CDS 2512539 2515244 . + 0 ID=CDS:Rv2241;Parent=transcript:Rv2241;protein_id=Rv2241 ### -Chromosome ena gene 2515304 2516548 . + . ID=gene:Rv2242;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2242;logic_name=ena +Chromosome ena gene 2515304 2516548 . + . ID=gene:Rv2242;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2242;logic_name=ena Chromosome ena mRNA 2515304 2516548 . + . ID=transcript:Rv2242;Parent=gene:Rv2242;biotype=protein_coding;transcript_id=Rv2242 Chromosome ena exon 2515304 2516548 . + . Parent=transcript:Rv2242;Name=Rv2242-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2242-1;rank=1 Chromosome ena CDS 2515304 2516548 . + 0 ID=CDS:Rv2242;Parent=transcript:Rv2242;protein_id=Rv2242 ### -Chromosome ena gene 2516787 2517695 . + . ID=gene:Rv2243;Name=fabD;biotype=protein_coding;description=Malonyl CoA-acyl carrier protein transacylase FabD (malonyl CoA:ACPM acyltransferase) (MCT);gene_id=Rv2243;logic_name=ena +Chromosome ena gene 2516787 2517695 . + . ID=gene:Rv2243;Name=fabD;biotype=protein_coding;description=Malonyl CoA-acyl carrier protein transacylase FabD (malonyl CoA:ACPM acyltransferase) (MCT);gene_id=Rv2243;logic_name=ena Chromosome ena mRNA 2516787 2517695 . + . ID=transcript:Rv2243;Parent=gene:Rv2243;Name=fabD-1;biotype=protein_coding;transcript_id=Rv2243 Chromosome ena exon 2516787 2517695 . + . Parent=transcript:Rv2243;Name=Rv2243-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2243-1;rank=1 Chromosome ena CDS 2516787 2517695 . + 0 ID=CDS:Rv2243;Parent=transcript:Rv2243;protein_id=Rv2243 @@ -11760,358 +11760,358 @@ Chromosome ena transcript 2517032 2517134 . - . ID=transcript:EBG00000313389;Par Chromosome ena exon 2517032 2517134 . - . Parent=transcript:EBG00000313389;Name=EBG00000313389;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313389;rank=1 ### Chromosome ena_gene biological_region 2517032 2517134 . - . external_name=AL123456.3:gene:complement(2517032..2517134);logic_name=ena_gene -Chromosome ena gene 2517771 2518118 . + . ID=gene:Rv2244;Name=acpM;biotype=protein_coding;description=Meromycolate extension acyl carrier protein AcpM;gene_id=Rv2244;logic_name=ena +Chromosome ena gene 2517771 2518118 . + . ID=gene:Rv2244;Name=acpM;biotype=protein_coding;description=Meromycolate extension acyl carrier protein AcpM;gene_id=Rv2244;logic_name=ena Chromosome ena mRNA 2517771 2518118 . + . ID=transcript:Rv2244;Parent=gene:Rv2244;Name=acpM-1;biotype=protein_coding;transcript_id=Rv2244 Chromosome ena exon 2517771 2518118 . + . Parent=transcript:Rv2244;Name=Rv2244-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2244-1;rank=1 Chromosome ena CDS 2517771 2518118 . + 0 ID=CDS:Rv2244;Parent=transcript:Rv2244;protein_id=Rv2244 ### -Chromosome ena gene 2518115 2519365 . + . ID=gene:Rv2245;Name=kasA;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] synthase 1 KasA (beta-ketoacyl-ACP synthase) (KAS I);gene_id=Rv2245;logic_name=ena +Chromosome ena gene 2518115 2519365 . + . ID=gene:Rv2245;Name=kasA;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] synthase 1 KasA (beta-ketoacyl-ACP synthase) (KAS I);gene_id=Rv2245;logic_name=ena Chromosome ena mRNA 2518115 2519365 . + . ID=transcript:Rv2245;Parent=gene:Rv2245;Name=kasA-1;biotype=protein_coding;transcript_id=Rv2245 Chromosome ena exon 2518115 2519365 . + . Parent=transcript:Rv2245;Name=Rv2245-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2245-1;rank=1 Chromosome ena CDS 2518115 2519365 . + 0 ID=CDS:Rv2245;Parent=transcript:Rv2245;protein_id=Rv2245 ### -Chromosome ena gene 2519396 2520712 . + . ID=gene:Rv2246;Name=kasB;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] synthase 2 KasB (beta-ketoacyl-ACP synthase) (KAS I);gene_id=Rv2246;logic_name=ena +Chromosome ena gene 2519396 2520712 . + . ID=gene:Rv2246;Name=kasB;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] synthase 2 KasB (beta-ketoacyl-ACP synthase) (KAS I);gene_id=Rv2246;logic_name=ena Chromosome ena mRNA 2519396 2520712 . + . ID=transcript:Rv2246;Parent=gene:Rv2246;Name=kasB-1;biotype=protein_coding;transcript_id=Rv2246 Chromosome ena exon 2519396 2520712 . + . Parent=transcript:Rv2246;Name=Rv2246-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2246-1;rank=1 Chromosome ena CDS 2519396 2520712 . + 0 ID=CDS:Rv2246;Parent=transcript:Rv2246;protein_id=Rv2246 ### -Chromosome ena gene 2520743 2522164 . + . ID=gene:Rv2247;Name=accD6;biotype=protein_coding;description=Acetyl/propionyl-CoA carboxylase (beta subunit) AccD6;gene_id=Rv2247;logic_name=ena +Chromosome ena gene 2520743 2522164 . + . ID=gene:Rv2247;Name=accD6;biotype=protein_coding;description=Acetyl/propionyl-CoA carboxylase (beta subunit) AccD6;gene_id=Rv2247;logic_name=ena Chromosome ena mRNA 2520743 2522164 . + . ID=transcript:Rv2247;Parent=gene:Rv2247;Name=accD6-1;biotype=protein_coding;transcript_id=Rv2247 Chromosome ena exon 2520743 2522164 . + . Parent=transcript:Rv2247;Name=Rv2247-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2247-1;rank=1 Chromosome ena CDS 2520743 2522164 . + 0 ID=CDS:Rv2247;Parent=transcript:Rv2247;protein_id=Rv2247 ### -Chromosome ena gene 2522360 2523175 . + . ID=gene:Rv2248;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2248;logic_name=ena +Chromosome ena gene 2522360 2523175 . + . ID=gene:Rv2248;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2248;logic_name=ena Chromosome ena mRNA 2522360 2523175 . + . ID=transcript:Rv2248;Parent=gene:Rv2248;biotype=protein_coding;transcript_id=Rv2248 Chromosome ena exon 2522360 2523175 . + . Parent=transcript:Rv2248;Name=Rv2248-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2248-1;rank=1 Chromosome ena CDS 2522360 2523175 . + 0 ID=CDS:Rv2248;Parent=transcript:Rv2248;protein_id=Rv2248 ### -Chromosome ena gene 2523241 2524791 . - . ID=gene:Rv2249c;Name=glpD1;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase GlpD1;gene_id=Rv2249c;logic_name=ena +Chromosome ena gene 2523241 2524791 . - . ID=gene:Rv2249c;Name=glpD1;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase GlpD1;gene_id=Rv2249c;logic_name=ena Chromosome ena mRNA 2523241 2524791 . - . ID=transcript:Rv2249c;Parent=gene:Rv2249c;Name=glpD1-1;biotype=protein_coding;transcript_id=Rv2249c Chromosome ena exon 2523241 2524791 . - . Parent=transcript:Rv2249c;Name=Rv2249c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2249c-1;rank=1 Chromosome ena CDS 2523241 2524791 . - 0 ID=CDS:Rv2249c;Parent=transcript:Rv2249c;protein_id=Rv2249c ### -Chromosome ena gene 2524785 2525354 . - . ID=gene:Rv2250c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2250c;logic_name=ena +Chromosome ena gene 2524785 2525354 . - . ID=gene:Rv2250c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2250c;logic_name=ena Chromosome ena mRNA 2524785 2525354 . - . ID=transcript:Rv2250c;Parent=gene:Rv2250c;biotype=protein_coding;transcript_id=Rv2250c Chromosome ena exon 2524785 2525354 . - . Parent=transcript:Rv2250c;Name=Rv2250c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2250c-1;rank=1 Chromosome ena CDS 2524785 2525354 . - 0 ID=CDS:Rv2250c;Parent=transcript:Rv2250c;protein_id=Rv2250c ### -Chromosome ena gene 2525402 2525821 . + . ID=gene:Rv2250A;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv2250A;logic_name=ena +Chromosome ena gene 2525402 2525821 . + . ID=gene:Rv2250A;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv2250A;logic_name=ena Chromosome ena mRNA 2525402 2525821 . + . ID=transcript:Rv2250A;Parent=gene:Rv2250A;biotype=protein_coding;transcript_id=Rv2250A Chromosome ena exon 2525402 2525821 . + . Parent=transcript:Rv2250A;Name=Rv2250A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2250A-1;rank=1 Chromosome ena CDS 2525402 2525821 . + 0 ID=CDS:Rv2250A;Parent=transcript:Rv2250A;protein_id=Rv2250A ### -Chromosome ena gene 2525565 2526992 . + . ID=gene:Rv2251;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv2251;logic_name=ena +Chromosome ena gene 2525565 2526992 . + . ID=gene:Rv2251;biotype=protein_coding;description=Possible flavoprotein;gene_id=Rv2251;logic_name=ena Chromosome ena mRNA 2525565 2526992 . + . ID=transcript:Rv2251;Parent=gene:Rv2251;biotype=protein_coding;transcript_id=Rv2251 Chromosome ena exon 2525565 2526992 . + . Parent=transcript:Rv2251;Name=Rv2251-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2251-1;rank=1 Chromosome ena CDS 2525565 2526992 . + 0 ID=CDS:Rv2251;Parent=transcript:Rv2251;protein_id=Rv2251 ### -Chromosome ena gene 2526989 2527918 . + . ID=gene:Rv2252;biotype=protein_coding;description=Diacylglycerol kinase;gene_id=Rv2252;logic_name=ena +Chromosome ena gene 2526989 2527918 . + . ID=gene:Rv2252;biotype=protein_coding;description=Diacylglycerol kinase;gene_id=Rv2252;logic_name=ena Chromosome ena mRNA 2526989 2527918 . + . ID=transcript:Rv2252;Parent=gene:Rv2252;biotype=protein_coding;transcript_id=Rv2252 Chromosome ena exon 2526989 2527918 . + . Parent=transcript:Rv2252;Name=Rv2252-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2252-1;rank=1 Chromosome ena CDS 2526989 2527918 . + 0 ID=CDS:Rv2252;Parent=transcript:Rv2252;protein_id=Rv2252 ### -Chromosome ena gene 2527984 2528487 . + . ID=gene:Rv2253;biotype=protein_coding;description=Possible secreted unknown protein;gene_id=Rv2253;logic_name=ena +Chromosome ena gene 2527984 2528487 . + . ID=gene:Rv2253;biotype=protein_coding;description=Possible secreted unknown protein;gene_id=Rv2253;logic_name=ena Chromosome ena mRNA 2527984 2528487 . + . ID=transcript:Rv2253;Parent=gene:Rv2253;biotype=protein_coding;transcript_id=Rv2253 Chromosome ena exon 2527984 2528487 . + . Parent=transcript:Rv2253;Name=Rv2253-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2253-1;rank=1 Chromosome ena CDS 2527984 2528487 . + 0 ID=CDS:Rv2253;Parent=transcript:Rv2253;protein_id=Rv2253 ### -Chromosome ena gene 2528520 2528975 . - . ID=gene:Rv2254c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2254c;logic_name=ena +Chromosome ena gene 2528520 2528975 . - . ID=gene:Rv2254c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2254c;logic_name=ena Chromosome ena mRNA 2528520 2528975 . - . ID=transcript:Rv2254c;Parent=gene:Rv2254c;biotype=protein_coding;transcript_id=Rv2254c Chromosome ena exon 2528520 2528975 . - . Parent=transcript:Rv2254c;Name=Rv2254c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2254c-1;rank=1 Chromosome ena CDS 2528520 2528975 . - 0 ID=CDS:Rv2254c;Parent=transcript:Rv2254c;protein_id=Rv2254c ### -Chromosome ena gene 2528980 2529174 . - . ID=gene:Rv2255c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2255c;logic_name=ena +Chromosome ena gene 2528980 2529174 . - . ID=gene:Rv2255c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2255c;logic_name=ena Chromosome ena mRNA 2528980 2529174 . - . ID=transcript:Rv2255c;Parent=gene:Rv2255c;biotype=protein_coding;transcript_id=Rv2255c Chromosome ena exon 2528980 2529174 . - . Parent=transcript:Rv2255c;Name=Rv2255c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2255c-1;rank=1 Chromosome ena CDS 2528980 2529174 . - 0 ID=CDS:Rv2255c;Parent=transcript:Rv2255c;protein_id=Rv2255c ### -Chromosome ena gene 2529341 2529874 . - . ID=gene:Rv2256c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2256c;logic_name=ena +Chromosome ena gene 2529341 2529874 . - . ID=gene:Rv2256c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2256c;logic_name=ena Chromosome ena mRNA 2529341 2529874 . - . ID=transcript:Rv2256c;Parent=gene:Rv2256c;biotype=protein_coding;transcript_id=Rv2256c Chromosome ena exon 2529341 2529874 . - . Parent=transcript:Rv2256c;Name=Rv2256c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2256c-1;rank=1 Chromosome ena CDS 2529341 2529874 . - 0 ID=CDS:Rv2256c;Parent=transcript:Rv2256c;protein_id=Rv2256c ### -Chromosome ena gene 2530004 2530822 . - . ID=gene:Rv2257c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2257c;logic_name=ena +Chromosome ena gene 2530004 2530822 . - . ID=gene:Rv2257c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2257c;logic_name=ena Chromosome ena mRNA 2530004 2530822 . - . ID=transcript:Rv2257c;Parent=gene:Rv2257c;biotype=protein_coding;transcript_id=Rv2257c Chromosome ena exon 2530004 2530822 . - . Parent=transcript:Rv2257c;Name=Rv2257c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2257c-1;rank=1 Chromosome ena CDS 2530004 2530822 . - 0 ID=CDS:Rv2257c;Parent=transcript:Rv2257c;protein_id=Rv2257c ### -Chromosome ena gene 2530836 2531897 . - . ID=gene:Rv2258c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2258c;logic_name=ena +Chromosome ena gene 2530836 2531897 . - . ID=gene:Rv2258c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2258c;logic_name=ena Chromosome ena mRNA 2530836 2531897 . - . ID=transcript:Rv2258c;Parent=gene:Rv2258c;biotype=protein_coding;transcript_id=Rv2258c Chromosome ena exon 2530836 2531897 . - . Parent=transcript:Rv2258c;Name=Rv2258c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2258c-1;rank=1 Chromosome ena CDS 2530836 2531897 . - 0 ID=CDS:Rv2258c;Parent=transcript:Rv2258c;protein_id=Rv2258c ### -Chromosome ena gene 2532245 2533330 . + . ID=gene:Rv2259;Name=mscR;biotype=protein_coding;description=S-nitrosomycothiol reductase MscR;gene_id=Rv2259;logic_name=ena +Chromosome ena gene 2532245 2533330 . + . ID=gene:Rv2259;Name=mscR;biotype=protein_coding;description=S-nitrosomycothiol reductase MscR;gene_id=Rv2259;logic_name=ena Chromosome ena mRNA 2532245 2533330 . + . ID=transcript:Rv2259;Parent=gene:Rv2259;Name=mscR-1;biotype=protein_coding;transcript_id=Rv2259 Chromosome ena exon 2532245 2533330 . + . Parent=transcript:Rv2259;Name=Rv2259-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2259-1;rank=1 Chromosome ena CDS 2532245 2533330 . + 0 ID=CDS:Rv2259;Parent=transcript:Rv2259;protein_id=Rv2259 ### -Chromosome ena gene 2533330 2533965 . + . ID=gene:Rv2260;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2260;logic_name=ena +Chromosome ena gene 2533330 2533965 . + . ID=gene:Rv2260;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2260;logic_name=ena Chromosome ena mRNA 2533330 2533965 . + . ID=transcript:Rv2260;Parent=gene:Rv2260;biotype=protein_coding;transcript_id=Rv2260 Chromosome ena exon 2533330 2533965 . + . Parent=transcript:Rv2260;Name=Rv2260-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2260-1;rank=1 Chromosome ena CDS 2533330 2533965 . + 0 ID=CDS:Rv2260;Parent=transcript:Rv2260;protein_id=Rv2260 ### -Chromosome ena gene 2534042 2534464 . - . ID=gene:Rv2261c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2261c;logic_name=ena +Chromosome ena gene 2534042 2534464 . - . ID=gene:Rv2261c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2261c;logic_name=ena Chromosome ena mRNA 2534042 2534464 . - . ID=transcript:Rv2261c;Parent=gene:Rv2261c;biotype=protein_coding;transcript_id=Rv2261c Chromosome ena exon 2534042 2534464 . - . Parent=transcript:Rv2261c;Name=Rv2261c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2261c-1;rank=1 Chromosome ena CDS 2534042 2534464 . - 0 ID=CDS:Rv2261c;Parent=transcript:Rv2261c;protein_id=Rv2261c ### -Chromosome ena gene 2534470 2535552 . - . ID=gene:Rv2262c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2262c;logic_name=ena +Chromosome ena gene 2534470 2535552 . - . ID=gene:Rv2262c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2262c;logic_name=ena Chromosome ena mRNA 2534470 2535552 . - . ID=transcript:Rv2262c;Parent=gene:Rv2262c;biotype=protein_coding;transcript_id=Rv2262c Chromosome ena exon 2534470 2535552 . - . Parent=transcript:Rv2262c;Name=Rv2262c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2262c-1;rank=1 Chromosome ena CDS 2534470 2535552 . - 0 ID=CDS:Rv2262c;Parent=transcript:Rv2262c;protein_id=Rv2262c ### -Chromosome ena gene 2535641 2536594 . + . ID=gene:Rv2263;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2263;logic_name=ena +Chromosome ena gene 2535641 2536594 . + . ID=gene:Rv2263;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2263;logic_name=ena Chromosome ena mRNA 2535641 2536594 . + . ID=transcript:Rv2263;Parent=gene:Rv2263;biotype=protein_coding;transcript_id=Rv2263 Chromosome ena exon 2535641 2536594 . + . Parent=transcript:Rv2263;Name=Rv2263-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2263-1;rank=1 Chromosome ena CDS 2535641 2536594 . + 0 ID=CDS:Rv2263;Parent=transcript:Rv2263;protein_id=Rv2263 ### -Chromosome ena gene 2536572 2538350 . - . ID=gene:Rv2264c;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv2264c;logic_name=ena +Chromosome ena gene 2536572 2538350 . - . ID=gene:Rv2264c;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv2264c;logic_name=ena Chromosome ena mRNA 2536572 2538350 . - . ID=transcript:Rv2264c;Parent=gene:Rv2264c;biotype=protein_coding;transcript_id=Rv2264c Chromosome ena exon 2536572 2538350 . - . Parent=transcript:Rv2264c;Name=Rv2264c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2264c-1;rank=1 Chromosome ena CDS 2536572 2538350 . - 0 ID=CDS:Rv2264c;Parent=transcript:Rv2264c;protein_id=Rv2264c ### -Chromosome ena gene 2538700 2539929 . + . ID=gene:Rv2265;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2265;logic_name=ena +Chromosome ena gene 2538700 2539929 . + . ID=gene:Rv2265;biotype=protein_coding;description=Possible conserved integral membrane protein;gene_id=Rv2265;logic_name=ena Chromosome ena mRNA 2538700 2539929 . + . ID=transcript:Rv2265;Parent=gene:Rv2265;biotype=protein_coding;transcript_id=Rv2265 Chromosome ena exon 2538700 2539929 . + . Parent=transcript:Rv2265;Name=Rv2265-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2265-1;rank=1 Chromosome ena CDS 2538700 2539929 . + 0 ID=CDS:Rv2265;Parent=transcript:Rv2265;protein_id=Rv2265 ### -Chromosome ena gene 2540104 2541390 . + . ID=gene:Rv2266;Name=cyp124;biotype=protein_coding;description=Probable cytochrome P450 124 Cyp124;gene_id=Rv2266;logic_name=ena +Chromosome ena gene 2540104 2541390 . + . ID=gene:Rv2266;Name=cyp124;biotype=protein_coding;description=Probable cytochrome P450 124 Cyp124;gene_id=Rv2266;logic_name=ena Chromosome ena mRNA 2540104 2541390 . + . ID=transcript:Rv2266;Parent=gene:Rv2266;Name=cyp124-1;biotype=protein_coding;transcript_id=Rv2266 Chromosome ena exon 2540104 2541390 . + . Parent=transcript:Rv2266;Name=Rv2266-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2266-1;rank=1 Chromosome ena CDS 2540104 2541390 . + 0 ID=CDS:Rv2266;Parent=transcript:Rv2266;protein_id=Rv2266 ### -Chromosome ena gene 2541644 2542810 . - . ID=gene:Rv2267c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2267c;logic_name=ena +Chromosome ena gene 2541644 2542810 . - . ID=gene:Rv2267c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2267c;logic_name=ena Chromosome ena mRNA 2541644 2542810 . - . ID=transcript:Rv2267c;Parent=gene:Rv2267c;biotype=protein_coding;transcript_id=Rv2267c Chromosome ena exon 2541644 2542810 . - . Parent=transcript:Rv2267c;Name=Rv2267c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2267c-1;rank=1 Chromosome ena CDS 2541644 2542810 . - 0 ID=CDS:Rv2267c;Parent=transcript:Rv2267c;protein_id=Rv2267c ### -Chromosome ena gene 2542807 2544276 . - . ID=gene:Rv2268c;Name=cyp128;biotype=protein_coding;description=Probable cytochrome P450 128 Cyp128;gene_id=Rv2268c;logic_name=ena +Chromosome ena gene 2542807 2544276 . - . ID=gene:Rv2268c;Name=cyp128;biotype=protein_coding;description=Probable cytochrome P450 128 Cyp128;gene_id=Rv2268c;logic_name=ena Chromosome ena mRNA 2542807 2544276 . - . ID=transcript:Rv2268c;Parent=gene:Rv2268c;Name=cyp128-1;biotype=protein_coding;transcript_id=Rv2268c Chromosome ena exon 2542807 2544276 . - . Parent=transcript:Rv2268c;Name=Rv2268c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2268c-1;rank=1 Chromosome ena CDS 2542807 2544276 . - 0 ID=CDS:Rv2268c;Parent=transcript:Rv2268c;protein_id=Rv2268c ### -Chromosome ena gene 2544289 2544621 . - . ID=gene:Rv2269c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2269c;logic_name=ena +Chromosome ena gene 2544289 2544621 . - . ID=gene:Rv2269c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2269c;logic_name=ena Chromosome ena mRNA 2544289 2544621 . - . ID=transcript:Rv2269c;Parent=gene:Rv2269c;biotype=protein_coding;transcript_id=Rv2269c Chromosome ena exon 2544289 2544621 . - . Parent=transcript:Rv2269c;Name=Rv2269c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2269c-1;rank=1 Chromosome ena CDS 2544289 2544621 . - 0 ID=CDS:Rv2269c;Parent=transcript:Rv2269c;protein_id=Rv2269c ### -Chromosome ena gene 2544698 2545225 . + . ID=gene:Rv2270;Name=lppN;biotype=protein_coding;description=Probable lipoprotein LppN;gene_id=Rv2270;logic_name=ena +Chromosome ena gene 2544698 2545225 . + . ID=gene:Rv2270;Name=lppN;biotype=protein_coding;description=Probable lipoprotein LppN;gene_id=Rv2270;logic_name=ena Chromosome ena mRNA 2544698 2545225 . + . ID=transcript:Rv2270;Parent=gene:Rv2270;Name=lppN-1;biotype=protein_coding;transcript_id=Rv2270 Chromosome ena exon 2544698 2545225 . + . Parent=transcript:Rv2270;Name=Rv2270-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2270-1;rank=1 Chromosome ena CDS 2544698 2545225 . + 0 ID=CDS:Rv2270;Parent=transcript:Rv2270;protein_id=Rv2270 ### -Chromosome ena gene 2545332 2545631 . + . ID=gene:Rv2271;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2271;logic_name=ena +Chromosome ena gene 2545332 2545631 . + . ID=gene:Rv2271;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2271;logic_name=ena Chromosome ena mRNA 2545332 2545631 . + . ID=transcript:Rv2271;Parent=gene:Rv2271;biotype=protein_coding;transcript_id=Rv2271 Chromosome ena exon 2545332 2545631 . + . Parent=transcript:Rv2271;Name=Rv2271-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2271-1;rank=1 Chromosome ena CDS 2545332 2545631 . + 0 ID=CDS:Rv2271;Parent=transcript:Rv2271;protein_id=Rv2271 ### -Chromosome ena gene 2545737 2546105 . + . ID=gene:Rv2272;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2272;logic_name=ena +Chromosome ena gene 2545737 2546105 . + . ID=gene:Rv2272;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2272;logic_name=ena Chromosome ena mRNA 2545737 2546105 . + . ID=transcript:Rv2272;Parent=gene:Rv2272;biotype=protein_coding;transcript_id=Rv2272 Chromosome ena exon 2545737 2546105 . + . Parent=transcript:Rv2272;Name=Rv2272-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2272-1;rank=1 Chromosome ena CDS 2545737 2546105 . + 0 ID=CDS:Rv2272;Parent=transcript:Rv2272;protein_id=Rv2272 ### -Chromosome ena gene 2546102 2546431 . + . ID=gene:Rv2273;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2273;logic_name=ena +Chromosome ena gene 2546102 2546431 . + . ID=gene:Rv2273;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2273;logic_name=ena Chromosome ena mRNA 2546102 2546431 . + . ID=transcript:Rv2273;Parent=gene:Rv2273;biotype=protein_coding;transcript_id=Rv2273 Chromosome ena exon 2546102 2546431 . + . Parent=transcript:Rv2273;Name=Rv2273-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2273-1;rank=1 Chromosome ena CDS 2546102 2546431 . + 0 ID=CDS:Rv2273;Parent=transcript:Rv2273;protein_id=Rv2273 ### -Chromosome ena gene 2546488 2546805 . - . ID=gene:Rv2274c;Name=mazF8;biotype=protein_coding;description=Possible toxin MazF8;gene_id=Rv2274c;logic_name=ena +Chromosome ena gene 2546488 2546805 . - . ID=gene:Rv2274c;Name=mazF8;biotype=protein_coding;description=Possible toxin MazF8;gene_id=Rv2274c;logic_name=ena Chromosome ena mRNA 2546488 2546805 . - . ID=transcript:Rv2274c;Parent=gene:Rv2274c;Name=mazF8-1;biotype=protein_coding;transcript_id=Rv2274c Chromosome ena exon 2546488 2546805 . - . Parent=transcript:Rv2274c;Name=Rv2274c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2274c-1;rank=1 Chromosome ena CDS 2546488 2546805 . - 0 ID=CDS:Rv2274c;Parent=transcript:Rv2274c;protein_id=Rv2274c ### -Chromosome ena gene 2546839 2547087 . - . ID=gene:Rv2274A;Name=mazE8;biotype=protein_coding;description=Possible antitoxin MazE8;gene_id=Rv2274A;logic_name=ena +Chromosome ena gene 2546839 2547087 . - . ID=gene:Rv2274A;Name=mazE8;biotype=protein_coding;description=Possible antitoxin MazE8;gene_id=Rv2274A;logic_name=ena Chromosome ena mRNA 2546839 2547087 . - . ID=transcript:Rv2274A;Parent=gene:Rv2274A;Name=mazE8-1;biotype=protein_coding;transcript_id=Rv2274A Chromosome ena exon 2546839 2547087 . - . Parent=transcript:Rv2274A;Name=Rv2274A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2274A-1;rank=1 Chromosome ena CDS 2546839 2547087 . - 0 ID=CDS:Rv2274A;Parent=transcript:Rv2274A;protein_id=Rv2274A ### -Chromosome ena gene 2546883 2547752 . + . ID=gene:Rv2275;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2275;logic_name=ena +Chromosome ena gene 2546883 2547752 . + . ID=gene:Rv2275;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2275;logic_name=ena Chromosome ena mRNA 2546883 2547752 . + . ID=transcript:Rv2275;Parent=gene:Rv2275;biotype=protein_coding;transcript_id=Rv2275 Chromosome ena exon 2546883 2547752 . + . Parent=transcript:Rv2275;Name=Rv2275-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2275-1;rank=1 Chromosome ena CDS 2546883 2547752 . + 0 ID=CDS:Rv2275;Parent=transcript:Rv2275;protein_id=Rv2275 ### -Chromosome ena gene 2547749 2548939 . + . ID=gene:Rv2276;Name=cyp121;biotype=protein_coding;description=Cytochrome P450 121 Cyp121;gene_id=Rv2276;logic_name=ena +Chromosome ena gene 2547749 2548939 . + . ID=gene:Rv2276;Name=cyp121;biotype=protein_coding;description=Cytochrome P450 121 Cyp121;gene_id=Rv2276;logic_name=ena Chromosome ena mRNA 2547749 2548939 . + . ID=transcript:Rv2276;Parent=gene:Rv2276;Name=cyp121-1;biotype=protein_coding;transcript_id=Rv2276 Chromosome ena exon 2547749 2548939 . + . Parent=transcript:Rv2276;Name=Rv2276-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2276-1;rank=1 Chromosome ena CDS 2547749 2548939 . + 0 ID=CDS:Rv2276;Parent=transcript:Rv2276;protein_id=Rv2276 ### -Chromosome ena gene 2549124 2550029 . - . ID=gene:Rv2277c;biotype=protein_coding;description=Possible glycerolphosphodiesterase;gene_id=Rv2277c;logic_name=ena +Chromosome ena gene 2549124 2550029 . - . ID=gene:Rv2277c;biotype=protein_coding;description=Possible glycerolphosphodiesterase;gene_id=Rv2277c;logic_name=ena Chromosome ena mRNA 2549124 2550029 . - . ID=transcript:Rv2277c;Parent=gene:Rv2277c;biotype=protein_coding;transcript_id=Rv2277c Chromosome ena exon 2549124 2550029 . - . Parent=transcript:Rv2277c;Name=Rv2277c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2277c-1;rank=1 Chromosome ena CDS 2549124 2550029 . - 0 ID=CDS:Rv2277c;Parent=transcript:Rv2277c;protein_id=Rv2277c ### -Chromosome ena_mobile_element biological_region 2550014 2551368 . + . external_name=IS6110-7%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 2550065 2550391 . + . ID=gene:Rv2278;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2278;logic_name=ena +Chromosome ena_mobile_element biological_region 2550014 2551368 . + . external_name=IS6110-7%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 2550065 2550391 . + . ID=gene:Rv2278;biotype=protein_coding;description=Putative transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2278;logic_name=ena Chromosome ena mRNA 2550065 2550391 . + . ID=transcript:Rv2278;Parent=gene:Rv2278;biotype=protein_coding;transcript_id=Rv2278 Chromosome ena exon 2550065 2550391 . + . Parent=transcript:Rv2278;Name=Rv2278-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2278-1;rank=1 Chromosome ena CDS 2550065 2550391 . + 0 ID=CDS:Rv2278;Parent=transcript:Rv2278;protein_id=Rv2278 ### -Chromosome ena gene 2550340 2551326 . + . ID=gene:Rv2279;biotype=protein_coding;description=Probable transposase;gene_id=Rv2279;logic_name=ena +Chromosome ena gene 2550340 2551326 . + . ID=gene:Rv2279;biotype=protein_coding;description=Probable transposase;gene_id=Rv2279;logic_name=ena Chromosome ena mRNA 2550340 2551326 . + . ID=transcript:Rv2279;Parent=gene:Rv2279;biotype=protein_coding;transcript_id=Rv2279 Chromosome ena exon 2550340 2551326 . + . Parent=transcript:Rv2279;Name=Rv2279-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2279-1;rank=1 Chromosome ena CDS 2550340 2551326 . + 0 ID=CDS:Rv2279;Parent=transcript:Rv2279;protein_id=Rv2279 ### -Chromosome ena gene 2551560 2552939 . + . ID=gene:Rv2280;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv2280;logic_name=ena +Chromosome ena gene 2551560 2552939 . + . ID=gene:Rv2280;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv2280;logic_name=ena Chromosome ena mRNA 2551560 2552939 . + . ID=transcript:Rv2280;Parent=gene:Rv2280;biotype=protein_coding;transcript_id=Rv2280 Chromosome ena exon 2551560 2552939 . + . Parent=transcript:Rv2280;Name=Rv2280-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2280-1;rank=1 Chromosome ena CDS 2551560 2552939 . + 0 ID=CDS:Rv2280;Parent=transcript:Rv2280;protein_id=Rv2280 ### -Chromosome ena gene 2553173 2554831 . + . ID=gene:Rv2281;Name=pitB;biotype=protein_coding;description=Putative phosphate-transport permease PitB;gene_id=Rv2281;logic_name=ena +Chromosome ena gene 2553173 2554831 . + . ID=gene:Rv2281;Name=pitB;biotype=protein_coding;description=Putative phosphate-transport permease PitB;gene_id=Rv2281;logic_name=ena Chromosome ena mRNA 2553173 2554831 . + . ID=transcript:Rv2281;Parent=gene:Rv2281;Name=pitB-1;biotype=protein_coding;transcript_id=Rv2281 Chromosome ena exon 2553173 2554831 . + . Parent=transcript:Rv2281;Name=Rv2281-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2281-1;rank=1 Chromosome ena CDS 2553173 2554831 . + 0 ID=CDS:Rv2281;Parent=transcript:Rv2281;protein_id=Rv2281 ### -Chromosome ena gene 2554938 2555876 . - . ID=gene:Rv2282c;biotype=protein_coding;description=Probable transcription regulator (LysR family);gene_id=Rv2282c;logic_name=ena +Chromosome ena gene 2554938 2555876 . - . ID=gene:Rv2282c;biotype=protein_coding;description=Probable transcription regulator (LysR family);gene_id=Rv2282c;logic_name=ena Chromosome ena mRNA 2554938 2555876 . - . ID=transcript:Rv2282c;Parent=gene:Rv2282c;biotype=protein_coding;transcript_id=Rv2282c Chromosome ena exon 2554938 2555876 . - . Parent=transcript:Rv2282c;Name=Rv2282c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2282c-1;rank=1 Chromosome ena CDS 2554938 2555876 . - 0 ID=CDS:Rv2282c;Parent=transcript:Rv2282c;protein_id=Rv2282c ### -Chromosome ena gene 2555941 2556135 . + . ID=gene:Rv2283;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2283;logic_name=ena +Chromosome ena gene 2555941 2556135 . + . ID=gene:Rv2283;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2283;logic_name=ena Chromosome ena mRNA 2555941 2556135 . + . ID=transcript:Rv2283;Parent=gene:Rv2283;biotype=protein_coding;transcript_id=Rv2283 Chromosome ena exon 2555941 2556135 . + . Parent=transcript:Rv2283;Name=Rv2283-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2283-1;rank=1 Chromosome ena CDS 2555941 2556135 . + 0 ID=CDS:Rv2283;Parent=transcript:Rv2283;protein_id=Rv2283 ### -Chromosome ena gene 2556145 2557440 . + . ID=gene:Rv2284;Name=lipM;biotype=protein_coding;description=Probable esterase LipM;gene_id=Rv2284;logic_name=ena +Chromosome ena gene 2556145 2557440 . + . ID=gene:Rv2284;Name=lipM;biotype=protein_coding;description=Probable esterase LipM;gene_id=Rv2284;logic_name=ena Chromosome ena mRNA 2556145 2557440 . + . ID=transcript:Rv2284;Parent=gene:Rv2284;Name=lipM-1;biotype=protein_coding;transcript_id=Rv2284 Chromosome ena exon 2556145 2557440 . + . Parent=transcript:Rv2284;Name=Rv2284-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2284-1;rank=1 Chromosome ena CDS 2556145 2557440 . + 0 ID=CDS:Rv2284;Parent=transcript:Rv2284;protein_id=Rv2284 ### -Chromosome ena gene 2557473 2558810 . + . ID=gene:Rv2285;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv2285;logic_name=ena +Chromosome ena gene 2557473 2558810 . + . ID=gene:Rv2285;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv2285;logic_name=ena Chromosome ena mRNA 2557473 2558810 . + . ID=transcript:Rv2285;Parent=gene:Rv2285;biotype=protein_coding;transcript_id=Rv2285 Chromosome ena exon 2557473 2558810 . + . Parent=transcript:Rv2285;Name=Rv2285-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2285-1;rank=1 Chromosome ena CDS 2557473 2558810 . + 0 ID=CDS:Rv2285;Parent=transcript:Rv2285;protein_id=Rv2285 ### -Chromosome ena gene 2558877 2559569 . - . ID=gene:Rv2286c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2286c;logic_name=ena +Chromosome ena gene 2558877 2559569 . - . ID=gene:Rv2286c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2286c;logic_name=ena Chromosome ena mRNA 2558877 2559569 . - . ID=transcript:Rv2286c;Parent=gene:Rv2286c;biotype=protein_coding;transcript_id=Rv2286c Chromosome ena exon 2558877 2559569 . - . Parent=transcript:Rv2286c;Name=Rv2286c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2286c-1;rank=1 Chromosome ena CDS 2558877 2559569 . - 0 ID=CDS:Rv2286c;Parent=transcript:Rv2286c;protein_id=Rv2286c ### -Chromosome ena gene 2559703 2561331 . + . ID=gene:Rv2287;Name=yjcE;biotype=protein_coding;description=Probable conserved integral membrane transport protein YjcE;gene_id=Rv2287;logic_name=ena +Chromosome ena gene 2559703 2561331 . + . ID=gene:Rv2287;Name=yjcE;biotype=protein_coding;description=Probable conserved integral membrane transport protein YjcE;gene_id=Rv2287;logic_name=ena Chromosome ena mRNA 2559703 2561331 . + . ID=transcript:Rv2287;Parent=gene:Rv2287;Name=yjcE-1;biotype=protein_coding;transcript_id=Rv2287 Chromosome ena exon 2559703 2561331 . + . Parent=transcript:Rv2287;Name=Rv2287-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2287-1;rank=1 Chromosome ena CDS 2559703 2561331 . + 0 ID=CDS:Rv2287;Parent=transcript:Rv2287;protein_id=Rv2287 ### -Chromosome ena gene 2561328 2561705 . + . ID=gene:Rv2288;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2288;logic_name=ena +Chromosome ena gene 2561328 2561705 . + . ID=gene:Rv2288;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2288;logic_name=ena Chromosome ena mRNA 2561328 2561705 . + . ID=transcript:Rv2288;Parent=gene:Rv2288;biotype=protein_coding;transcript_id=Rv2288 Chromosome ena exon 2561328 2561705 . + . Parent=transcript:Rv2288;Name=Rv2288-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2288-1;rank=1 Chromosome ena CDS 2561328 2561705 . + 0 ID=CDS:Rv2288;Parent=transcript:Rv2288;protein_id=Rv2288 ### -Chromosome ena gene 2561675 2562457 . + . ID=gene:Rv2289;Name=cdh;biotype=protein_coding;description=Probable CDP-diacylglycerol pyrophosphatase Cdh (CDP-diacylglycerol diphosphatase) (CDP-diacylglycerol phosphatidylhydrolase);gene_id=Rv2289;logic_name=ena +Chromosome ena gene 2561675 2562457 . + . ID=gene:Rv2289;Name=cdh;biotype=protein_coding;description=Probable CDP-diacylglycerol pyrophosphatase Cdh (CDP-diacylglycerol diphosphatase) (CDP-diacylglycerol phosphatidylhydrolase);gene_id=Rv2289;logic_name=ena Chromosome ena mRNA 2561675 2562457 . + . ID=transcript:Rv2289;Parent=gene:Rv2289;Name=cdh-1;biotype=protein_coding;transcript_id=Rv2289 Chromosome ena exon 2561675 2562457 . + . Parent=transcript:Rv2289;Name=Rv2289-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2289-1;rank=1 Chromosome ena CDS 2561675 2562457 . + 0 ID=CDS:Rv2289;Parent=transcript:Rv2289;protein_id=Rv2289 ### -Chromosome ena gene 2562599 2563114 . + . ID=gene:Rv2290;Name=lppO;biotype=protein_coding;description=Probable conserved lipoprotein LppO;gene_id=Rv2290;logic_name=ena +Chromosome ena gene 2562599 2563114 . + . ID=gene:Rv2290;Name=lppO;biotype=protein_coding;description=Probable conserved lipoprotein LppO;gene_id=Rv2290;logic_name=ena Chromosome ena mRNA 2562599 2563114 . + . ID=transcript:Rv2290;Parent=gene:Rv2290;Name=lppO-1;biotype=protein_coding;transcript_id=Rv2290 Chromosome ena exon 2562599 2563114 . + . Parent=transcript:Rv2290;Name=Rv2290-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2290-1;rank=1 Chromosome ena CDS 2562599 2563114 . + 0 ID=CDS:Rv2290;Parent=transcript:Rv2290;protein_id=Rv2290 ### -Chromosome ena gene 2563174 2564028 . + . ID=gene:Rv2291;Name=sseB;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase SseB;gene_id=Rv2291;logic_name=ena +Chromosome ena gene 2563174 2564028 . + . ID=gene:Rv2291;Name=sseB;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase SseB;gene_id=Rv2291;logic_name=ena Chromosome ena mRNA 2563174 2564028 . + . ID=transcript:Rv2291;Parent=gene:Rv2291;Name=sseB-1;biotype=protein_coding;transcript_id=Rv2291 Chromosome ena exon 2563174 2564028 . + . Parent=transcript:Rv2291;Name=Rv2291-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2291-1;rank=1 Chromosome ena CDS 2563174 2564028 . + 0 ID=CDS:Rv2291;Parent=transcript:Rv2291;protein_id=Rv2291 ### -Chromosome ena gene 2564029 2564253 . - . ID=gene:Rv2292c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2292c;logic_name=ena +Chromosome ena gene 2564029 2564253 . - . ID=gene:Rv2292c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2292c;logic_name=ena Chromosome ena mRNA 2564029 2564253 . - . ID=transcript:Rv2292c;Parent=gene:Rv2292c;biotype=protein_coding;transcript_id=Rv2292c Chromosome ena exon 2564029 2564253 . - . Parent=transcript:Rv2292c;Name=Rv2292c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2292c-1;rank=1 Chromosome ena CDS 2564029 2564253 . - 0 ID=CDS:Rv2292c;Parent=transcript:Rv2292c;protein_id=Rv2292c ### -Chromosome ena gene 2564292 2565032 . - . ID=gene:Rv2293c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2293c;logic_name=ena +Chromosome ena gene 2564292 2565032 . - . ID=gene:Rv2293c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2293c;logic_name=ena Chromosome ena mRNA 2564292 2565032 . - . ID=transcript:Rv2293c;Parent=gene:Rv2293c;biotype=protein_coding;transcript_id=Rv2293c Chromosome ena exon 2564292 2565032 . - . Parent=transcript:Rv2293c;Name=Rv2293c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2293c-1;rank=1 Chromosome ena CDS 2564292 2565032 . - 0 ID=CDS:Rv2293c;Parent=transcript:Rv2293c;protein_id=Rv2293c ### -Chromosome ena gene 2565327 2566550 . + . ID=gene:Rv2294;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv2294;logic_name=ena +Chromosome ena gene 2565327 2566550 . + . ID=gene:Rv2294;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv2294;logic_name=ena Chromosome ena mRNA 2565327 2566550 . + . ID=transcript:Rv2294;Parent=gene:Rv2294;biotype=protein_coding;transcript_id=Rv2294 Chromosome ena exon 2565327 2566550 . + . Parent=transcript:Rv2294;Name=Rv2294-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2294-1;rank=1 Chromosome ena CDS 2565327 2566550 . + 0 ID=CDS:Rv2294;Parent=transcript:Rv2294;protein_id=Rv2294 ### -Chromosome ena gene 2566772 2567410 . + . ID=gene:Rv2295;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2295;logic_name=ena +Chromosome ena gene 2566772 2567410 . + . ID=gene:Rv2295;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2295;logic_name=ena Chromosome ena mRNA 2566772 2567410 . + . ID=transcript:Rv2295;Parent=gene:Rv2295;biotype=protein_coding;transcript_id=Rv2295 Chromosome ena exon 2566772 2567410 . + . Parent=transcript:Rv2295;Name=Rv2295-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2295-1;rank=1 Chromosome ena CDS 2566772 2567410 . + 0 ID=CDS:Rv2295;Parent=transcript:Rv2295;protein_id=Rv2295 ### -Chromosome ena gene 2567504 2568406 . + . ID=gene:Rv2296;biotype=protein_coding;description=Probable haloalkane dehalogenase;gene_id=Rv2296;logic_name=ena +Chromosome ena gene 2567504 2568406 . + . ID=gene:Rv2296;biotype=protein_coding;description=Probable haloalkane dehalogenase;gene_id=Rv2296;logic_name=ena Chromosome ena mRNA 2567504 2568406 . + . ID=transcript:Rv2296;Parent=gene:Rv2296;biotype=protein_coding;transcript_id=Rv2296 Chromosome ena exon 2567504 2568406 . + . Parent=transcript:Rv2296;Name=Rv2296-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2296-1;rank=1 Chromosome ena CDS 2567504 2568406 . + 0 ID=CDS:Rv2296;Parent=transcript:Rv2296;protein_id=Rv2296 ### -Chromosome ena gene 2568438 2568890 . + . ID=gene:Rv2297;biotype=protein_coding;description=Unknown protein;gene_id=Rv2297;logic_name=ena +Chromosome ena gene 2568438 2568890 . + . ID=gene:Rv2297;biotype=protein_coding;description=Unknown protein;gene_id=Rv2297;logic_name=ena Chromosome ena mRNA 2568438 2568890 . + . ID=transcript:Rv2297;Parent=gene:Rv2297;biotype=protein_coding;transcript_id=Rv2297 Chromosome ena exon 2568438 2568890 . + . Parent=transcript:Rv2297;Name=Rv2297-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2297-1;rank=1 Chromosome ena CDS 2568438 2568890 . + 0 ID=CDS:Rv2297;Parent=transcript:Rv2297;protein_id=Rv2297 ### -Chromosome ena gene 2569082 2570053 . + . ID=gene:Rv2298;biotype=protein_coding;description=Conserved protein;gene_id=Rv2298;logic_name=ena +Chromosome ena gene 2569082 2570053 . + . ID=gene:Rv2298;biotype=protein_coding;description=Conserved protein;gene_id=Rv2298;logic_name=ena Chromosome ena mRNA 2569082 2570053 . + . ID=transcript:Rv2298;Parent=gene:Rv2298;biotype=protein_coding;transcript_id=Rv2298 Chromosome ena exon 2569082 2570053 . + . Parent=transcript:Rv2298;Name=Rv2298-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2298-1;rank=1 Chromosome ena CDS 2569082 2570053 . + 0 ID=CDS:Rv2298;Parent=transcript:Rv2298;protein_id=Rv2298 ### -Chromosome ena gene 2570059 2572002 . - . ID=gene:Rv2299c;Name=htpG;biotype=protein_coding;description=Probable chaperone protein HtpG (heat shock protein) (HSP90 family protein) (high temperature protein G);gene_id=Rv2299c;logic_name=ena +Chromosome ena gene 2570059 2572002 . - . ID=gene:Rv2299c;Name=htpG;biotype=protein_coding;description=Probable chaperone protein HtpG (heat shock protein) (HSP90 family protein) (high temperature protein G);gene_id=Rv2299c;logic_name=ena Chromosome ena mRNA 2570059 2572002 . - . ID=transcript:Rv2299c;Parent=gene:Rv2299c;Name=htpG-1;biotype=protein_coding;transcript_id=Rv2299c Chromosome ena exon 2570059 2572002 . - . Parent=transcript:Rv2299c;Name=Rv2299c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2299c-1;rank=1 Chromosome ena CDS 2570059 2572002 . - 0 ID=CDS:Rv2299c;Parent=transcript:Rv2299c;protein_id=Rv2299c ### -Chromosome ena gene 2572076 2573008 . - . ID=gene:Rv2300c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2300c;logic_name=ena +Chromosome ena gene 2572076 2573008 . - . ID=gene:Rv2300c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2300c;logic_name=ena Chromosome ena mRNA 2572076 2573008 . - . ID=transcript:Rv2300c;Parent=gene:Rv2300c;biotype=protein_coding;transcript_id=Rv2300c Chromosome ena exon 2572076 2573008 . - . Parent=transcript:Rv2300c;Name=Rv2300c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2300c-1;rank=1 Chromosome ena CDS 2572076 2573008 . - 0 ID=CDS:Rv2300c;Parent=transcript:Rv2300c;protein_id=Rv2300c ### -Chromosome ena gene 2573015 2573707 . + . ID=gene:Rv2301;Name=cut2;biotype=protein_coding;description=Probable cutinase Cut2;gene_id=Rv2301;logic_name=ena +Chromosome ena gene 2573015 2573707 . + . ID=gene:Rv2301;Name=cut2;biotype=protein_coding;description=Probable cutinase Cut2;gene_id=Rv2301;logic_name=ena Chromosome ena mRNA 2573015 2573707 . + . ID=transcript:Rv2301;Parent=gene:Rv2301;Name=cut2-1;biotype=protein_coding;transcript_id=Rv2301 Chromosome ena exon 2573015 2573707 . + . Parent=transcript:Rv2301;Name=Rv2301-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2301-1;rank=1 Chromosome ena CDS 2573015 2573707 . + 0 ID=CDS:Rv2301;Parent=transcript:Rv2301;protein_id=Rv2301 ### -Chromosome ena gene 2573813 2574055 . + . ID=gene:Rv2302;biotype=protein_coding;description=Conserved protein;gene_id=Rv2302;logic_name=ena +Chromosome ena gene 2573813 2574055 . + . ID=gene:Rv2302;biotype=protein_coding;description=Conserved protein;gene_id=Rv2302;logic_name=ena Chromosome ena mRNA 2573813 2574055 . + . ID=transcript:Rv2302;Parent=gene:Rv2302;biotype=protein_coding;transcript_id=Rv2302 Chromosome ena exon 2573813 2574055 . + . Parent=transcript:Rv2302;Name=Rv2302-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2302-1;rank=1 Chromosome ena CDS 2573813 2574055 . + 0 ID=CDS:Rv2302;Parent=transcript:Rv2302;protein_id=Rv2302 ### -Chromosome ena gene 2574096 2575019 . - . ID=gene:Rv2303c;biotype=protein_coding;description=Probable antibiotic-resistance protein;gene_id=Rv2303c;logic_name=ena +Chromosome ena gene 2574096 2575019 . - . ID=gene:Rv2303c;biotype=protein_coding;description=Probable antibiotic-resistance protein;gene_id=Rv2303c;logic_name=ena Chromosome ena mRNA 2574096 2575019 . - . ID=transcript:Rv2303c;Parent=gene:Rv2303c;biotype=protein_coding;transcript_id=Rv2303c Chromosome ena exon 2574096 2575019 . - . Parent=transcript:Rv2303c;Name=Rv2303c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2303c-1;rank=1 Chromosome ena CDS 2574096 2575019 . - 0 ID=CDS:Rv2303c;Parent=transcript:Rv2303c;protein_id=Rv2303c ### -Chromosome ena gene 2575016 2575225 . - . ID=gene:Rv2304c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2304c;logic_name=ena +Chromosome ena gene 2575016 2575225 . - . ID=gene:Rv2304c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2304c;logic_name=ena Chromosome ena mRNA 2575016 2575225 . - . ID=transcript:Rv2304c;Parent=gene:Rv2304c;biotype=protein_coding;transcript_id=Rv2304c Chromosome ena exon 2575016 2575225 . - . Parent=transcript:Rv2304c;Name=Rv2304c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2304c-1;rank=1 Chromosome ena CDS 2575016 2575225 . - 0 ID=CDS:Rv2304c;Parent=transcript:Rv2304c;protein_id=Rv2304c ### -Chromosome ena gene 2575809 2577098 . + . ID=gene:Rv2305;biotype=protein_coding;description=Unknown protein;gene_id=Rv2305;logic_name=ena +Chromosome ena gene 2575809 2577098 . + . ID=gene:Rv2305;biotype=protein_coding;description=Unknown protein;gene_id=Rv2305;logic_name=ena Chromosome ena mRNA 2575809 2577098 . + . ID=transcript:Rv2305;Parent=gene:Rv2305;biotype=protein_coding;transcript_id=Rv2305 Chromosome ena exon 2575809 2577098 . + . Parent=transcript:Rv2305;Name=Rv2305-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2305-1;rank=1 Chromosome ena CDS 2575809 2577098 . + 0 ID=CDS:Rv2305;Parent=transcript:Rv2305;protein_id=Rv2305 ### -Chromosome ena gene 2577108 2577701 . + . ID=gene:Rv2306A;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2306A;logic_name=ena +Chromosome ena gene 2577108 2577701 . + . ID=gene:Rv2306A;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2306A;logic_name=ena Chromosome ena mRNA 2577108 2577701 . + . ID=transcript:Rv2306A;Parent=gene:Rv2306A;biotype=protein_coding;transcript_id=Rv2306A Chromosome ena exon 2577108 2577701 . + . Parent=transcript:Rv2306A;Name=Rv2306A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2306A-1;rank=1 Chromosome ena CDS 2577108 2577701 . + 0 ID=CDS:Rv2306A;Parent=transcript:Rv2306A;protein_id=Rv2306A ### -Chromosome ena gene 2577488 2577922 . + . ID=gene:Rv2306B;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2306B;logic_name=ena +Chromosome ena gene 2577488 2577922 . + . ID=gene:Rv2306B;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2306B;logic_name=ena Chromosome ena mRNA 2577488 2577922 . + . ID=transcript:Rv2306B;Parent=gene:Rv2306B;biotype=protein_coding;transcript_id=Rv2306B Chromosome ena exon 2577488 2577922 . + . Parent=transcript:Rv2306B;Name=Rv2306B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2306B-1;rank=1 Chromosome ena CDS 2577488 2577922 . + 0 ID=CDS:Rv2306B;Parent=transcript:Rv2306B;protein_id=Rv2306B ### -Chromosome ena gene 2577851 2578696 . - . ID=gene:Rv2307c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2307c;logic_name=ena +Chromosome ena gene 2577851 2578696 . - . ID=gene:Rv2307c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2307c;logic_name=ena Chromosome ena mRNA 2577851 2578696 . - . ID=transcript:Rv2307c;Parent=gene:Rv2307c;biotype=protein_coding;transcript_id=Rv2307c Chromosome ena exon 2577851 2578696 . - . Parent=transcript:Rv2307c;Name=Rv2307c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2307c-1;rank=1 Chromosome ena CDS 2577851 2578696 . - 0 ID=CDS:Rv2307c;Parent=transcript:Rv2307c;protein_id=Rv2307c ### -Chromosome ena gene 2579228 2579419 . - . ID=gene:Rv2307A;biotype=protein_coding;description=Hypothetical glycine rich protein;gene_id=Rv2307A;logic_name=ena +Chromosome ena gene 2579228 2579419 . - . ID=gene:Rv2307A;biotype=protein_coding;description=Hypothetical glycine rich protein;gene_id=Rv2307A;logic_name=ena Chromosome ena mRNA 2579228 2579419 . - . ID=transcript:Rv2307A;Parent=gene:Rv2307A;biotype=protein_coding;transcript_id=Rv2307A Chromosome ena exon 2579228 2579419 . - . Parent=transcript:Rv2307A;Name=Rv2307A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2307A-1;rank=1 Chromosome ena CDS 2579228 2579419 . - 0 ID=CDS:Rv2307A;Parent=transcript:Rv2307A;protein_id=Rv2307A ### -Chromosome ena gene 2579504 2579935 . - . ID=gene:Rv2307B;biotype=protein_coding;description=Hypothetical glycine rich protein;gene_id=Rv2307B;logic_name=ena +Chromosome ena gene 2579504 2579935 . - . ID=gene:Rv2307B;biotype=protein_coding;description=Hypothetical glycine rich protein;gene_id=Rv2307B;logic_name=ena Chromosome ena mRNA 2579504 2579935 . - . ID=transcript:Rv2307B;Parent=gene:Rv2307B;biotype=protein_coding;transcript_id=Rv2307B Chromosome ena exon 2579504 2579935 . - . Parent=transcript:Rv2307B;Name=Rv2307B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2307B-1;rank=1 Chromosome ena CDS 2579504 2579935 . - 0 ID=CDS:Rv2307B;Parent=transcript:Rv2307B;protein_id=Rv2307B ### -Chromosome ena gene 2580028 2580210 . - . ID=gene:Rv2307D;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2307D;logic_name=ena +Chromosome ena gene 2580028 2580210 . - . ID=gene:Rv2307D;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2307D;logic_name=ena Chromosome ena mRNA 2580028 2580210 . - . ID=transcript:Rv2307D;Parent=gene:Rv2307D;biotype=protein_coding;transcript_id=Rv2307D Chromosome ena exon 2580028 2580210 . - . Parent=transcript:Rv2307D;Name=Rv2307D-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2307D-1;rank=1 Chromosome ena CDS 2580028 2580210 . - 0 ID=CDS:Rv2307D;Parent=transcript:Rv2307D;protein_id=Rv2307D ### -Chromosome ena gene 2580419 2581135 . + . ID=gene:Rv2308;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2308;logic_name=ena +Chromosome ena gene 2580419 2581135 . + . ID=gene:Rv2308;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2308;logic_name=ena Chromosome ena mRNA 2580419 2581135 . + . ID=transcript:Rv2308;Parent=gene:Rv2308;biotype=protein_coding;transcript_id=Rv2308 Chromosome ena exon 2580419 2581135 . + . Parent=transcript:Rv2308;Name=Rv2308-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2308-1;rank=1 Chromosome ena CDS 2580419 2581135 . + 0 ID=CDS:Rv2308;Parent=transcript:Rv2308;protein_id=Rv2308 @@ -12121,172 +12121,172 @@ Chromosome ena transcript 2581764 2581837 . - . ID=transcript:EBG00000313384;Par Chromosome ena exon 2581764 2581837 . - . Parent=transcript:EBG00000313384;Name=EBG00000313384;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313384;rank=1 ### Chromosome ena_gene biological_region 2581764 2581837 . - . external_name=AL123456.3:gene:complement(2581764..2581837);logic_name=ena_gene -Chromosome ena gene 2581843 2582298 . - . ID=gene:Rv2309c;biotype=protein_coding;description=Possible integrase (fragment);gene_id=Rv2309c;logic_name=ena +Chromosome ena gene 2581843 2582298 . - . ID=gene:Rv2309c;biotype=protein_coding;description=Possible integrase (fragment);gene_id=Rv2309c;logic_name=ena Chromosome ena mRNA 2581843 2582298 . - . ID=transcript:Rv2309c;Parent=gene:Rv2309c;biotype=protein_coding;transcript_id=Rv2309c Chromosome ena exon 2581843 2582298 . - . Parent=transcript:Rv2309c;Name=Rv2309c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2309c-1;rank=1 Chromosome ena CDS 2581843 2582298 . - 0 ID=CDS:Rv2309c;Parent=transcript:Rv2309c;protein_id=Rv2309c ### -Chromosome ena gene 2583045 2583332 . + . ID=gene:Rv2309A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2309A;logic_name=ena +Chromosome ena gene 2583045 2583332 . + . ID=gene:Rv2309A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2309A;logic_name=ena Chromosome ena mRNA 2583045 2583332 . + . ID=transcript:Rv2309A;Parent=gene:Rv2309A;biotype=protein_coding;transcript_id=Rv2309A Chromosome ena exon 2583045 2583332 . + . Parent=transcript:Rv2309A;Name=Rv2309A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2309A-1;rank=1 Chromosome ena CDS 2583045 2583332 . + 0 ID=CDS:Rv2309A;Parent=transcript:Rv2309A;protein_id=Rv2309A ### -Chromosome ena gene 2583435 2583779 . + . ID=gene:Rv2310;biotype=protein_coding;description=Possible excisionase;gene_id=Rv2310;logic_name=ena +Chromosome ena gene 2583435 2583779 . + . ID=gene:Rv2310;biotype=protein_coding;description=Possible excisionase;gene_id=Rv2310;logic_name=ena Chromosome ena mRNA 2583435 2583779 . + . ID=transcript:Rv2310;Parent=gene:Rv2310;biotype=protein_coding;transcript_id=Rv2310 Chromosome ena exon 2583435 2583779 . + . Parent=transcript:Rv2310;Name=Rv2310-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2310-1;rank=1 Chromosome ena CDS 2583435 2583779 . + 0 ID=CDS:Rv2310;Parent=transcript:Rv2310;protein_id=Rv2310 ### -Chromosome ena gene 2583884 2584408 . + . ID=gene:Rv2311;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2311;logic_name=ena +Chromosome ena gene 2583884 2584408 . + . ID=gene:Rv2311;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2311;logic_name=ena Chromosome ena mRNA 2583884 2584408 . + . ID=transcript:Rv2311;Parent=gene:Rv2311;biotype=protein_coding;transcript_id=Rv2311 Chromosome ena exon 2583884 2584408 . + . Parent=transcript:Rv2311;Name=Rv2311-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2311-1;rank=1 Chromosome ena CDS 2583884 2584408 . + 0 ID=CDS:Rv2311;Parent=transcript:Rv2311;protein_id=Rv2311 ### -Chromosome ena gene 2584486 2584755 . + . ID=gene:Rv2312;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2312;logic_name=ena +Chromosome ena gene 2584486 2584755 . + . ID=gene:Rv2312;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2312;logic_name=ena Chromosome ena mRNA 2584486 2584755 . + . ID=transcript:Rv2312;Parent=gene:Rv2312;biotype=protein_coding;transcript_id=Rv2312 Chromosome ena exon 2584486 2584755 . + . Parent=transcript:Rv2312;Name=Rv2312-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2312-1;rank=1 Chromosome ena CDS 2584486 2584755 . + 0 ID=CDS:Rv2312;Parent=transcript:Rv2312;protein_id=Rv2312 ### -Chromosome ena gene 2585052 2585906 . - . ID=gene:Rv2313c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2313c;logic_name=ena +Chromosome ena gene 2585052 2585906 . - . ID=gene:Rv2313c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2313c;logic_name=ena Chromosome ena mRNA 2585052 2585906 . - . ID=transcript:Rv2313c;Parent=gene:Rv2313c;biotype=protein_coding;transcript_id=Rv2313c Chromosome ena exon 2585052 2585906 . - . Parent=transcript:Rv2313c;Name=Rv2313c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2313c-1;rank=1 Chromosome ena CDS 2585052 2585906 . - 0 ID=CDS:Rv2313c;Parent=transcript:Rv2313c;protein_id=Rv2313c ### -Chromosome ena gene 2585917 2587290 . - . ID=gene:Rv2314c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2314c;logic_name=ena +Chromosome ena gene 2585917 2587290 . - . ID=gene:Rv2314c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2314c;logic_name=ena Chromosome ena mRNA 2585917 2587290 . - . ID=transcript:Rv2314c;Parent=gene:Rv2314c;biotype=protein_coding;transcript_id=Rv2314c Chromosome ena exon 2585917 2587290 . - . Parent=transcript:Rv2314c;Name=Rv2314c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2314c-1;rank=1 Chromosome ena CDS 2585917 2587290 . - 0 ID=CDS:Rv2314c;Parent=transcript:Rv2314c;protein_id=Rv2314c ### -Chromosome ena gene 2587287 2588804 . - . ID=gene:Rv2315c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2315c;logic_name=ena +Chromosome ena gene 2587287 2588804 . - . ID=gene:Rv2315c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2315c;logic_name=ena Chromosome ena mRNA 2587287 2588804 . - . ID=transcript:Rv2315c;Parent=gene:Rv2315c;biotype=protein_coding;transcript_id=Rv2315c Chromosome ena exon 2587287 2588804 . - . Parent=transcript:Rv2315c;Name=Rv2315c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2315c-1;rank=1 Chromosome ena CDS 2587287 2588804 . - 0 ID=CDS:Rv2315c;Parent=transcript:Rv2315c;protein_id=Rv2315c ### -Chromosome ena gene 2588838 2589710 . + . ID=gene:Rv2316;Name=uspA;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter UspA;gene_id=Rv2316;logic_name=ena +Chromosome ena gene 2588838 2589710 . + . ID=gene:Rv2316;Name=uspA;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter UspA;gene_id=Rv2316;logic_name=ena Chromosome ena mRNA 2588838 2589710 . + . ID=transcript:Rv2316;Parent=gene:Rv2316;Name=uspA-1;biotype=protein_coding;transcript_id=Rv2316 Chromosome ena exon 2588838 2589710 . + . Parent=transcript:Rv2316;Name=Rv2316-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2316-1;rank=1 Chromosome ena CDS 2588838 2589710 . + 0 ID=CDS:Rv2316;Parent=transcript:Rv2316;protein_id=Rv2316 ### -Chromosome ena gene 2589697 2590521 . + . ID=gene:Rv2317;Name=uspB;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter UspB;gene_id=Rv2317;logic_name=ena +Chromosome ena gene 2589697 2590521 . + . ID=gene:Rv2317;Name=uspB;biotype=protein_coding;description=Probable sugar-transport integral membrane protein ABC transporter UspB;gene_id=Rv2317;logic_name=ena Chromosome ena mRNA 2589697 2590521 . + . ID=transcript:Rv2317;Parent=gene:Rv2317;Name=uspB-1;biotype=protein_coding;transcript_id=Rv2317 Chromosome ena exon 2589697 2590521 . + . Parent=transcript:Rv2317;Name=Rv2317-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2317-1;rank=1 Chromosome ena CDS 2589697 2590521 . + 0 ID=CDS:Rv2317;Parent=transcript:Rv2317;protein_id=Rv2317 ### -Chromosome ena gene 2590518 2591840 . + . ID=gene:Rv2318;Name=uspC;biotype=protein_coding;description=Probable periplasmic sugar-binding lipoprotein UspC;gene_id=Rv2318;logic_name=ena +Chromosome ena gene 2590518 2591840 . + . ID=gene:Rv2318;Name=uspC;biotype=protein_coding;description=Probable periplasmic sugar-binding lipoprotein UspC;gene_id=Rv2318;logic_name=ena Chromosome ena mRNA 2590518 2591840 . + . ID=transcript:Rv2318;Parent=gene:Rv2318;Name=uspC-1;biotype=protein_coding;transcript_id=Rv2318 Chromosome ena exon 2590518 2591840 . + . Parent=transcript:Rv2318;Name=Rv2318-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2318-1;rank=1 Chromosome ena CDS 2590518 2591840 . + 0 ID=CDS:Rv2318;Parent=transcript:Rv2318;protein_id=Rv2318 ### -Chromosome ena gene 2591848 2592726 . - . ID=gene:Rv2319c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2319c;logic_name=ena +Chromosome ena gene 2591848 2592726 . - . ID=gene:Rv2319c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2319c;logic_name=ena Chromosome ena mRNA 2591848 2592726 . - . ID=transcript:Rv2319c;Parent=gene:Rv2319c;biotype=protein_coding;transcript_id=Rv2319c Chromosome ena exon 2591848 2592726 . - . Parent=transcript:Rv2319c;Name=Rv2319c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2319c-1;rank=1 Chromosome ena CDS 2591848 2592726 . - 0 ID=CDS:Rv2319c;Parent=transcript:Rv2319c;protein_id=Rv2319c ### -Chromosome ena gene 2592723 2594153 . - . ID=gene:Rv2320c;Name=rocE;biotype=protein_coding;description=Probable cationic amino acid transport integral membrane protein RocE;gene_id=Rv2320c;logic_name=ena +Chromosome ena gene 2592723 2594153 . - . ID=gene:Rv2320c;Name=rocE;biotype=protein_coding;description=Probable cationic amino acid transport integral membrane protein RocE;gene_id=Rv2320c;logic_name=ena Chromosome ena mRNA 2592723 2594153 . - . ID=transcript:Rv2320c;Parent=gene:Rv2320c;Name=rocE-1;biotype=protein_coding;transcript_id=Rv2320c Chromosome ena exon 2592723 2594153 . - . Parent=transcript:Rv2320c;Name=Rv2320c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2320c-1;rank=1 Chromosome ena CDS 2592723 2594153 . - 0 ID=CDS:Rv2320c;Parent=transcript:Rv2320c;protein_id=Rv2320c ### -Chromosome ena gene 2594154 2594699 . - . ID=gene:Rv2321c;Name=rocD2;biotype=protein_coding;description=Probable ornithine aminotransferase (C-terminus part) RocD2 (ornithine--oxo-acid aminotransferase);gene_id=Rv2321c;logic_name=ena +Chromosome ena gene 2594154 2594699 . - . ID=gene:Rv2321c;Name=rocD2;biotype=protein_coding;description=Probable ornithine aminotransferase (C-terminus part) RocD2 (ornithine--oxo-acid aminotransferase);gene_id=Rv2321c;logic_name=ena Chromosome ena mRNA 2594154 2594699 . - . ID=transcript:Rv2321c;Parent=gene:Rv2321c;Name=rocD2-1;biotype=protein_coding;transcript_id=Rv2321c Chromosome ena exon 2594154 2594699 . - . Parent=transcript:Rv2321c;Name=Rv2321c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2321c-1;rank=1 Chromosome ena CDS 2594154 2594699 . - 0 ID=CDS:Rv2321c;Parent=transcript:Rv2321c;protein_id=Rv2321c ### -Chromosome ena gene 2594699 2595364 . - . ID=gene:Rv2322c;Name=rocD1;biotype=protein_coding;description=Probable ornithine aminotransferase (N-terminus part) RocD1 (ornithine--oxo-acid aminotransferase);gene_id=Rv2322c;logic_name=ena +Chromosome ena gene 2594699 2595364 . - . ID=gene:Rv2322c;Name=rocD1;biotype=protein_coding;description=Probable ornithine aminotransferase (N-terminus part) RocD1 (ornithine--oxo-acid aminotransferase);gene_id=Rv2322c;logic_name=ena Chromosome ena mRNA 2594699 2595364 . - . ID=transcript:Rv2322c;Parent=gene:Rv2322c;Name=rocD1-1;biotype=protein_coding;transcript_id=Rv2322c Chromosome ena exon 2594699 2595364 . - . Parent=transcript:Rv2322c;Name=Rv2322c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2322c-1;rank=1 Chromosome ena CDS 2594699 2595364 . - 0 ID=CDS:Rv2322c;Parent=transcript:Rv2322c;protein_id=Rv2322c ### -Chromosome ena gene 2595361 2596269 . - . ID=gene:Rv2323c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2323c;logic_name=ena +Chromosome ena gene 2595361 2596269 . - . ID=gene:Rv2323c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2323c;logic_name=ena Chromosome ena mRNA 2595361 2596269 . - . ID=transcript:Rv2323c;Parent=gene:Rv2323c;biotype=protein_coding;transcript_id=Rv2323c Chromosome ena exon 2595361 2596269 . - . Parent=transcript:Rv2323c;Name=Rv2323c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2323c-1;rank=1 Chromosome ena CDS 2595361 2596269 . - 0 ID=CDS:Rv2323c;Parent=transcript:Rv2323c;protein_id=Rv2323c ### -Chromosome ena gene 2596334 2596780 . + . ID=gene:Rv2324;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably AsnC-family);gene_id=Rv2324;logic_name=ena +Chromosome ena gene 2596334 2596780 . + . ID=gene:Rv2324;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably AsnC-family);gene_id=Rv2324;logic_name=ena Chromosome ena mRNA 2596334 2596780 . + . ID=transcript:Rv2324;Parent=gene:Rv2324;biotype=protein_coding;transcript_id=Rv2324 Chromosome ena exon 2596334 2596780 . + . Parent=transcript:Rv2324;Name=Rv2324-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2324-1;rank=1 Chromosome ena CDS 2596334 2596780 . + 0 ID=CDS:Rv2324;Parent=transcript:Rv2324;protein_id=Rv2324 ### -Chromosome ena gene 2597009 2597857 . - . ID=gene:Rv2325c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2325c;logic_name=ena +Chromosome ena gene 2597009 2597857 . - . ID=gene:Rv2325c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2325c;logic_name=ena Chromosome ena mRNA 2597009 2597857 . - . ID=transcript:Rv2325c;Parent=gene:Rv2325c;biotype=protein_coding;transcript_id=Rv2325c Chromosome ena exon 2597009 2597857 . - . Parent=transcript:Rv2325c;Name=Rv2325c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2325c-1;rank=1 Chromosome ena CDS 2597009 2597857 . - 0 ID=CDS:Rv2325c;Parent=transcript:Rv2325c;protein_id=Rv2325c ### -Chromosome ena gene 2597854 2599947 . - . ID=gene:Rv2326c;biotype=protein_coding;description=Possible transmembrane ATP-binding protein ABC transporter;gene_id=Rv2326c;logic_name=ena +Chromosome ena gene 2597854 2599947 . - . ID=gene:Rv2326c;biotype=protein_coding;description=Possible transmembrane ATP-binding protein ABC transporter;gene_id=Rv2326c;logic_name=ena Chromosome ena mRNA 2597854 2599947 . - . ID=transcript:Rv2326c;Parent=gene:Rv2326c;biotype=protein_coding;transcript_id=Rv2326c Chromosome ena exon 2597854 2599947 . - . Parent=transcript:Rv2326c;Name=Rv2326c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2326c-1;rank=1 Chromosome ena CDS 2597854 2599947 . - 0 ID=CDS:Rv2326c;Parent=transcript:Rv2326c;protein_id=Rv2326c ### -Chromosome ena gene 2599988 2600479 . + . ID=gene:Rv2327;biotype=protein_coding;description=Conserved protein;gene_id=Rv2327;logic_name=ena +Chromosome ena gene 2599988 2600479 . + . ID=gene:Rv2327;biotype=protein_coding;description=Conserved protein;gene_id=Rv2327;logic_name=ena Chromosome ena mRNA 2599988 2600479 . + . ID=transcript:Rv2327;Parent=gene:Rv2327;biotype=protein_coding;transcript_id=Rv2327 Chromosome ena exon 2599988 2600479 . + . Parent=transcript:Rv2327;Name=Rv2327-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2327-1;rank=1 Chromosome ena CDS 2599988 2600479 . + 0 ID=CDS:Rv2327;Parent=transcript:Rv2327;protein_id=Rv2327 ### -Chromosome ena gene 2600731 2601879 . + . ID=gene:Rv2328;Name=PE23;biotype=protein_coding;description=PE family protein PE23;gene_id=Rv2328;logic_name=ena +Chromosome ena gene 2600731 2601879 . + . ID=gene:Rv2328;Name=PE23;biotype=protein_coding;description=PE family protein PE23;gene_id=Rv2328;logic_name=ena Chromosome ena mRNA 2600731 2601879 . + . ID=transcript:Rv2328;Parent=gene:Rv2328;Name=PE23-1;biotype=protein_coding;transcript_id=Rv2328 Chromosome ena exon 2600731 2601879 . + . Parent=transcript:Rv2328;Name=Rv2328-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2328-1;rank=1 Chromosome ena CDS 2600731 2601879 . + 0 ID=CDS:Rv2328;Parent=transcript:Rv2328;protein_id=Rv2328 ### -Chromosome ena gene 2601914 2603461 . - . ID=gene:Rv2329c;Name=narK1;biotype=protein_coding;description=Probable nitrite extrusion protein 1 NarK1 (nitrite facilitator 1);gene_id=Rv2329c;logic_name=ena +Chromosome ena gene 2601914 2603461 . - . ID=gene:Rv2329c;Name=narK1;biotype=protein_coding;description=Probable nitrite extrusion protein 1 NarK1 (nitrite facilitator 1);gene_id=Rv2329c;logic_name=ena Chromosome ena mRNA 2601914 2603461 . - . ID=transcript:Rv2329c;Parent=gene:Rv2329c;Name=narK1-1;biotype=protein_coding;transcript_id=Rv2329c Chromosome ena exon 2601914 2603461 . - . Parent=transcript:Rv2329c;Name=Rv2329c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2329c-1;rank=1 Chromosome ena CDS 2601914 2603461 . - 0 ID=CDS:Rv2329c;Parent=transcript:Rv2329c;protein_id=Rv2329c ### -Chromosome ena gene 2603695 2604222 . - . ID=gene:Rv2330c;Name=lppP;biotype=protein_coding;description=Probable lipoprotein LppP;gene_id=Rv2330c;logic_name=ena +Chromosome ena gene 2603695 2604222 . - . ID=gene:Rv2330c;Name=lppP;biotype=protein_coding;description=Probable lipoprotein LppP;gene_id=Rv2330c;logic_name=ena Chromosome ena mRNA 2603695 2604222 . - . ID=transcript:Rv2330c;Parent=gene:Rv2330c;Name=lppP-1;biotype=protein_coding;transcript_id=Rv2330c Chromosome ena exon 2603695 2604222 . - . Parent=transcript:Rv2330c;Name=Rv2330c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2330c-1;rank=1 Chromosome ena CDS 2603695 2604222 . - 0 ID=CDS:Rv2330c;Parent=transcript:Rv2330c;protein_id=Rv2330c ### -Chromosome ena gene 2604297 2604683 . + . ID=gene:Rv2331;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2331;logic_name=ena +Chromosome ena gene 2604297 2604683 . + . ID=gene:Rv2331;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2331;logic_name=ena Chromosome ena mRNA 2604297 2604683 . + . ID=transcript:Rv2331;Parent=gene:Rv2331;biotype=protein_coding;transcript_id=Rv2331 Chromosome ena exon 2604297 2604683 . + . Parent=transcript:Rv2331;Name=Rv2331-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2331-1;rank=1 Chromosome ena CDS 2604297 2604683 . + 0 ID=CDS:Rv2331;Parent=transcript:Rv2331;protein_id=Rv2331 ### -Chromosome ena gene 2604740 2605078 . + . ID=gene:Rv2331A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2331A;logic_name=ena +Chromosome ena gene 2604740 2605078 . + . ID=gene:Rv2331A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2331A;logic_name=ena Chromosome ena mRNA 2604740 2605078 . + . ID=transcript:Rv2331A;Parent=gene:Rv2331A;biotype=protein_coding;transcript_id=Rv2331A Chromosome ena exon 2604740 2605078 . + . Parent=transcript:Rv2331A;Name=Rv2331A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2331A-1;rank=1 Chromosome ena CDS 2604740 2605078 . + 0 ID=CDS:Rv2331A;Parent=transcript:Rv2331A;protein_id=Rv2331A ### -Chromosome ena gene 2605108 2606754 . + . ID=gene:Rv2332;Name=mez;biotype=protein_coding;description=Probable [NAD] dependent malate oxidoreductase Mez (malic enzyme) (NAD-malic enzyme) (malate dehydrogenase (oxaloacetate decarboxylating)) (pyruvic-malic carboxylase) (NAD-me);gene_id=Rv2332;logic_name=ena +Chromosome ena gene 2605108 2606754 . + . ID=gene:Rv2332;Name=mez;biotype=protein_coding;description=Probable [NAD] dependent malate oxidoreductase Mez (malic enzyme) (NAD-malic enzyme) (malate dehydrogenase (oxaloacetate decarboxylating)) (pyruvic-malic carboxylase) (NAD-me);gene_id=Rv2332;logic_name=ena Chromosome ena mRNA 2605108 2606754 . + . ID=transcript:Rv2332;Parent=gene:Rv2332;Name=mez-1;biotype=protein_coding;transcript_id=Rv2332 Chromosome ena exon 2605108 2606754 . + . Parent=transcript:Rv2332;Name=Rv2332-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2332-1;rank=1 Chromosome ena CDS 2605108 2606754 . + 0 ID=CDS:Rv2332;Parent=transcript:Rv2332;protein_id=Rv2332 ### -Chromosome ena gene 2606708 2608321 . - . ID=gene:Rv2333c;Name=stp;biotype=protein_coding;description=Integral membrane drug efflux protein Stp;gene_id=Rv2333c;logic_name=ena +Chromosome ena gene 2606708 2608321 . - . ID=gene:Rv2333c;Name=stp;biotype=protein_coding;description=Integral membrane drug efflux protein Stp;gene_id=Rv2333c;logic_name=ena Chromosome ena mRNA 2606708 2608321 . - . ID=transcript:Rv2333c;Parent=gene:Rv2333c;Name=stp-1;biotype=protein_coding;transcript_id=Rv2333c Chromosome ena exon 2606708 2608321 . - . Parent=transcript:Rv2333c;Name=Rv2333c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2333c-1;rank=1 Chromosome ena CDS 2606708 2608321 . - 0 ID=CDS:Rv2333c;Parent=transcript:Rv2333c;protein_id=Rv2333c ### -Chromosome ena gene 2608796 2609728 . + . ID=gene:Rv2334;Name=cysK1;biotype=protein_coding;description=Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A);gene_id=Rv2334;logic_name=ena +Chromosome ena gene 2608796 2609728 . + . ID=gene:Rv2334;Name=cysK1;biotype=protein_coding;description=Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A);gene_id=Rv2334;logic_name=ena Chromosome ena mRNA 2608796 2609728 . + . ID=transcript:Rv2334;Parent=gene:Rv2334;Name=cysK1-1;biotype=protein_coding;transcript_id=Rv2334 Chromosome ena exon 2608796 2609728 . + . Parent=transcript:Rv2334;Name=Rv2334-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2334-1;rank=1 Chromosome ena CDS 2608796 2609728 . + 0 ID=CDS:Rv2334;Parent=transcript:Rv2334;protein_id=Rv2334 ### -Chromosome ena gene 2609732 2610421 . + . ID=gene:Rv2335;Name=cysE;biotype=protein_coding;description=Probable serine acetyltransferase CysE (sat);gene_id=Rv2335;logic_name=ena +Chromosome ena gene 2609732 2610421 . + . ID=gene:Rv2335;Name=cysE;biotype=protein_coding;description=Probable serine acetyltransferase CysE (sat);gene_id=Rv2335;logic_name=ena Chromosome ena mRNA 2609732 2610421 . + . ID=transcript:Rv2335;Parent=gene:Rv2335;Name=cysE-1;biotype=protein_coding;transcript_id=Rv2335 Chromosome ena exon 2609732 2610421 . + . Parent=transcript:Rv2335;Name=Rv2335-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2335-1;rank=1 Chromosome ena CDS 2609732 2610421 . + 0 ID=CDS:Rv2335;Parent=transcript:Rv2335;protein_id=Rv2335 ### -Chromosome ena gene 2610837 2611805 . + . ID=gene:Rv2336;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2336;logic_name=ena +Chromosome ena gene 2610837 2611805 . + . ID=gene:Rv2336;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2336;logic_name=ena Chromosome ena mRNA 2610837 2611805 . + . ID=transcript:Rv2336;Parent=gene:Rv2336;biotype=protein_coding;transcript_id=Rv2336 Chromosome ena exon 2610837 2611805 . + . Parent=transcript:Rv2336;Name=Rv2336-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2336-1;rank=1 Chromosome ena CDS 2610837 2611805 . + 0 ID=CDS:Rv2336;Parent=transcript:Rv2336;protein_id=Rv2336 ### -Chromosome ena gene 2611869 2612987 . - . ID=gene:Rv2337c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2337c;logic_name=ena +Chromosome ena gene 2611869 2612987 . - . ID=gene:Rv2337c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2337c;logic_name=ena Chromosome ena mRNA 2611869 2612987 . - . ID=transcript:Rv2337c;Parent=gene:Rv2337c;biotype=protein_coding;transcript_id=Rv2337c Chromosome ena exon 2611869 2612987 . - . Parent=transcript:Rv2337c;Name=Rv2337c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2337c-1;rank=1 Chromosome ena CDS 2611869 2612987 . - 0 ID=CDS:Rv2337c;Parent=transcript:Rv2337c;protein_id=Rv2337c ### -Chromosome ena gene 2613107 2614063 . - . ID=gene:Rv2338c;Name=moeW;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeW;gene_id=Rv2338c;logic_name=ena +Chromosome ena gene 2613107 2614063 . - . ID=gene:Rv2338c;Name=moeW;biotype=protein_coding;description=Possible molybdopterin biosynthesis protein MoeW;gene_id=Rv2338c;logic_name=ena Chromosome ena mRNA 2613107 2614063 . - . ID=transcript:Rv2338c;Parent=gene:Rv2338c;Name=moeW-1;biotype=protein_coding;transcript_id=Rv2338c Chromosome ena exon 2613107 2614063 . - . Parent=transcript:Rv2338c;Name=Rv2338c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2338c-1;rank=1 Chromosome ena CDS 2613107 2614063 . - 0 ID=CDS:Rv2338c;Parent=transcript:Rv2338c;protein_id=Rv2338c ### -Chromosome ena gene 2614693 2617581 . + . ID=gene:Rv2339;Name=mmpL9;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL9;gene_id=Rv2339;logic_name=ena +Chromosome ena gene 2614693 2617581 . + . ID=gene:Rv2339;Name=mmpL9;biotype=protein_coding;description=Probable conserved transmembrane transport protein MmpL9;gene_id=Rv2339;logic_name=ena Chromosome ena mRNA 2614693 2617581 . + . ID=transcript:Rv2339;Parent=gene:Rv2339;Name=mmpL9-1;biotype=protein_coding;transcript_id=Rv2339 Chromosome ena exon 2614693 2617581 . + . Parent=transcript:Rv2339;Name=Rv2339-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2339-1;rank=1 Chromosome ena CDS 2614693 2617581 . + 0 ID=CDS:Rv2339;Parent=transcript:Rv2339;protein_id=Rv2339 ### -Chromosome ena gene 2617667 2618908 . - . ID=gene:Rv2340c;Name=PE_PGRS39;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS39;gene_id=Rv2340c;logic_name=ena +Chromosome ena gene 2617667 2618908 . - . ID=gene:Rv2340c;Name=PE_PGRS39;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS39;gene_id=Rv2340c;logic_name=ena Chromosome ena mRNA 2617667 2618908 . - . ID=transcript:Rv2340c;Parent=gene:Rv2340c;Name=PE_PGRS39-1;biotype=protein_coding;transcript_id=Rv2340c Chromosome ena exon 2617667 2618908 . - . Parent=transcript:Rv2340c;Name=Rv2340c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2340c-1;rank=1 Chromosome ena CDS 2617667 2618908 . - 0 ID=CDS:Rv2340c;Parent=transcript:Rv2340c;protein_id=Rv2340c @@ -12296,278 +12296,278 @@ Chromosome ena transcript 2619407 2619479 . - . ID=transcript:EBG00000313352;Par Chromosome ena exon 2619407 2619479 . - . Parent=transcript:EBG00000313352;Name=EBG00000313352;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313352;rank=1 ### Chromosome ena_gene biological_region 2619407 2619479 . - . external_name=AL123456.3:gene:complement(2619407..2619479);logic_name=ena_gene -Chromosome ena gene 2619597 2620016 . + . ID=gene:Rv2341;Name=lppQ;biotype=protein_coding;description=Probable conserved lipoprotein LppQ;gene_id=Rv2341;logic_name=ena +Chromosome ena gene 2619597 2620016 . + . ID=gene:Rv2341;Name=lppQ;biotype=protein_coding;description=Probable conserved lipoprotein LppQ;gene_id=Rv2341;logic_name=ena Chromosome ena mRNA 2619597 2620016 . + . ID=transcript:Rv2341;Parent=gene:Rv2341;Name=lppQ-1;biotype=protein_coding;transcript_id=Rv2341 Chromosome ena exon 2619597 2620016 . + . Parent=transcript:Rv2341;Name=Rv2341-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2341-1;rank=1 Chromosome ena CDS 2619597 2620016 . + 0 ID=CDS:Rv2341;Parent=transcript:Rv2341;protein_id=Rv2341 ### -Chromosome ena gene 2620272 2620529 . + . ID=gene:Rv2342;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2342;logic_name=ena +Chromosome ena gene 2620272 2620529 . + . ID=gene:Rv2342;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2342;logic_name=ena Chromosome ena mRNA 2620272 2620529 . + . ID=transcript:Rv2342;Parent=gene:Rv2342;biotype=protein_coding;transcript_id=Rv2342 Chromosome ena exon 2620272 2620529 . + . Parent=transcript:Rv2342;Name=Rv2342-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2342-1;rank=1 Chromosome ena CDS 2620272 2620529 . + 0 ID=CDS:Rv2342;Parent=transcript:Rv2342;protein_id=Rv2342 ### -Chromosome ena gene 2620533 2622452 . - . ID=gene:Rv2343c;Name=dnaG;biotype=protein_coding;description=Probable DNA primase DnaG;gene_id=Rv2343c;logic_name=ena +Chromosome ena gene 2620533 2622452 . - . ID=gene:Rv2343c;Name=dnaG;biotype=protein_coding;description=Probable DNA primase DnaG;gene_id=Rv2343c;logic_name=ena Chromosome ena mRNA 2620533 2622452 . - . ID=transcript:Rv2343c;Parent=gene:Rv2343c;Name=dnaG-1;biotype=protein_coding;transcript_id=Rv2343c Chromosome ena exon 2620533 2622452 . - . Parent=transcript:Rv2343c;Name=Rv2343c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2343c-1;rank=1 Chromosome ena CDS 2620533 2622452 . - 0 ID=CDS:Rv2343c;Parent=transcript:Rv2343c;protein_id=Rv2343c ### -Chromosome ena gene 2622457 2623752 . - . ID=gene:Rv2344c;Name=dgt;biotype=protein_coding;description=Probable deoxyguanosine triphosphate triphosphohydrolase Dgt (dGTPase) (dGTP triphosphohydrolase);gene_id=Rv2344c;logic_name=ena +Chromosome ena gene 2622457 2623752 . - . ID=gene:Rv2344c;Name=dgt;biotype=protein_coding;description=Probable deoxyguanosine triphosphate triphosphohydrolase Dgt (dGTPase) (dGTP triphosphohydrolase);gene_id=Rv2344c;logic_name=ena Chromosome ena mRNA 2622457 2623752 . - . ID=transcript:Rv2344c;Parent=gene:Rv2344c;Name=dgt-1;biotype=protein_coding;transcript_id=Rv2344c Chromosome ena exon 2622457 2623752 . - . Parent=transcript:Rv2344c;Name=Rv2344c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2344c-1;rank=1 Chromosome ena CDS 2622457 2623752 . - 0 ID=CDS:Rv2344c;Parent=transcript:Rv2344c;protein_id=Rv2344c ### -Chromosome ena gene 2623821 2625803 . + . ID=gene:Rv2345;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2345;logic_name=ena +Chromosome ena gene 2623821 2625803 . + . ID=gene:Rv2345;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2345;logic_name=ena Chromosome ena mRNA 2623821 2625803 . + . ID=transcript:Rv2345;Parent=gene:Rv2345;biotype=protein_coding;transcript_id=Rv2345 Chromosome ena exon 2623821 2625803 . + . Parent=transcript:Rv2345;Name=Rv2345-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2345-1;rank=1 Chromosome ena CDS 2623821 2625803 . + 0 ID=CDS:Rv2345;Parent=transcript:Rv2345;protein_id=Rv2345 ### -Chromosome ena gene 2625888 2626172 . - . ID=gene:Rv2346c;Name=esxO;biotype=protein_coding;description=Putative ESAT-6 like protein EsxO (ESAT-6 like protein 6);gene_id=Rv2346c;logic_name=ena +Chromosome ena gene 2625888 2626172 . - . ID=gene:Rv2346c;Name=esxO;biotype=protein_coding;description=Putative ESAT-6 like protein EsxO (ESAT-6 like protein 6);gene_id=Rv2346c;logic_name=ena Chromosome ena mRNA 2625888 2626172 . - . ID=transcript:Rv2346c;Parent=gene:Rv2346c;Name=esxO-1;biotype=protein_coding;transcript_id=Rv2346c Chromosome ena exon 2625888 2626172 . - . Parent=transcript:Rv2346c;Name=Rv2346c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2346c-1;rank=1 Chromosome ena CDS 2625888 2626172 . - 0 ID=CDS:Rv2346c;Parent=transcript:Rv2346c;protein_id=Rv2346c ### -Chromosome ena gene 2626223 2626519 . - . ID=gene:Rv2347c;Name=esxP;biotype=protein_coding;description=Putative ESAT-6 like protein EsxP (ESAT-6 like protein 7);gene_id=Rv2347c;logic_name=ena +Chromosome ena gene 2626223 2626519 . - . ID=gene:Rv2347c;Name=esxP;biotype=protein_coding;description=Putative ESAT-6 like protein EsxP (ESAT-6 like protein 7);gene_id=Rv2347c;logic_name=ena Chromosome ena mRNA 2626223 2626519 . - . ID=transcript:Rv2347c;Parent=gene:Rv2347c;Name=esxP-1;biotype=protein_coding;transcript_id=Rv2347c Chromosome ena exon 2626223 2626519 . - . Parent=transcript:Rv2347c;Name=Rv2347c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2347c-1;rank=1 Chromosome ena CDS 2626223 2626519 . - 0 ID=CDS:Rv2347c;Parent=transcript:Rv2347c;protein_id=Rv2347c ### -Chromosome ena gene 2626654 2626980 . - . ID=gene:Rv2348c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2348c;logic_name=ena +Chromosome ena gene 2626654 2626980 . - . ID=gene:Rv2348c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2348c;logic_name=ena Chromosome ena mRNA 2626654 2626980 . - . ID=transcript:Rv2348c;Parent=gene:Rv2348c;biotype=protein_coding;transcript_id=Rv2348c Chromosome ena exon 2626654 2626980 . - . Parent=transcript:Rv2348c;Name=Rv2348c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2348c-1;rank=1 Chromosome ena CDS 2626654 2626980 . - 0 ID=CDS:Rv2348c;Parent=transcript:Rv2348c;protein_id=Rv2348c ### -Chromosome ena gene 2627172 2628698 . - . ID=gene:Rv2349c;Name=plcC;biotype=protein_coding;description=Probable phospholipase C 3 PlcC;gene_id=Rv2349c;logic_name=ena +Chromosome ena gene 2627172 2628698 . - . ID=gene:Rv2349c;Name=plcC;biotype=protein_coding;description=Probable phospholipase C 3 PlcC;gene_id=Rv2349c;logic_name=ena Chromosome ena mRNA 2627172 2628698 . - . ID=transcript:Rv2349c;Parent=gene:Rv2349c;Name=plcC-1;biotype=protein_coding;transcript_id=Rv2349c Chromosome ena exon 2627172 2628698 . - . Parent=transcript:Rv2349c;Name=Rv2349c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2349c-1;rank=1 Chromosome ena CDS 2627172 2628698 . - 0 ID=CDS:Rv2349c;Parent=transcript:Rv2349c;protein_id=Rv2349c ### -Chromosome ena gene 2628781 2630319 . - . ID=gene:Rv2350c;Name=plcB;biotype=protein_coding;description=Membrane-associated phospholipase C 2 PlcB;gene_id=Rv2350c;logic_name=ena +Chromosome ena gene 2628781 2630319 . - . ID=gene:Rv2350c;Name=plcB;biotype=protein_coding;description=Membrane-associated phospholipase C 2 PlcB;gene_id=Rv2350c;logic_name=ena Chromosome ena mRNA 2628781 2630319 . - . ID=transcript:Rv2350c;Parent=gene:Rv2350c;Name=plcB-1;biotype=protein_coding;transcript_id=Rv2350c Chromosome ena exon 2628781 2630319 . - . Parent=transcript:Rv2350c;Name=Rv2350c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2350c-1;rank=1 Chromosome ena CDS 2628781 2630319 . - 0 ID=CDS:Rv2350c;Parent=transcript:Rv2350c;protein_id=Rv2350c ### -Chromosome ena gene 2630537 2632075 . - . ID=gene:Rv2351c;Name=plcA;biotype=protein_coding;description=Membrane-associated phospholipase C 1 PlcA (MTP40 antigen);gene_id=Rv2351c;logic_name=ena +Chromosome ena gene 2630537 2632075 . - . ID=gene:Rv2351c;Name=plcA;biotype=protein_coding;description=Membrane-associated phospholipase C 1 PlcA (MTP40 antigen);gene_id=Rv2351c;logic_name=ena Chromosome ena mRNA 2630537 2632075 . - . ID=transcript:Rv2351c;Parent=gene:Rv2351c;Name=plcA-1;biotype=protein_coding;transcript_id=Rv2351c Chromosome ena exon 2630537 2632075 . - . Parent=transcript:Rv2351c;Name=Rv2351c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2351c-1;rank=1 Chromosome ena CDS 2630537 2632075 . - 0 ID=CDS:Rv2351c;Parent=transcript:Rv2351c;protein_id=Rv2351c ### -Chromosome ena gene 2632923 2634098 . - . ID=gene:Rv2352c;Name=PPE38;biotype=protein_coding;description=PPE family protein PPE38;gene_id=Rv2352c;logic_name=ena +Chromosome ena gene 2632923 2634098 . - . ID=gene:Rv2352c;Name=PPE38;biotype=protein_coding;description=PPE family protein PPE38;gene_id=Rv2352c;logic_name=ena Chromosome ena mRNA 2632923 2634098 . - . ID=transcript:Rv2352c;Parent=gene:Rv2352c;Name=PPE38-1;biotype=protein_coding;transcript_id=Rv2352c Chromosome ena exon 2632923 2634098 . - . Parent=transcript:Rv2352c;Name=Rv2352c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2352c-1;rank=1 Chromosome ena CDS 2632923 2634098 . - 0 ID=CDS:Rv2352c;Parent=transcript:Rv2352c;protein_id=Rv2352c ### -Chromosome ena gene 2634528 2635592 . - . ID=gene:Rv2353c;Name=PPE39;biotype=protein_coding;description=PPE family protein PPE39;gene_id=Rv2353c;logic_name=ena +Chromosome ena gene 2634528 2635592 . - . ID=gene:Rv2353c;Name=PPE39;biotype=protein_coding;description=PPE family protein PPE39;gene_id=Rv2353c;logic_name=ena Chromosome ena mRNA 2634528 2635592 . - . ID=transcript:Rv2353c;Parent=gene:Rv2353c;Name=PPE39-1;biotype=protein_coding;transcript_id=Rv2353c Chromosome ena exon 2634528 2635592 . - . Parent=transcript:Rv2353c;Name=Rv2353c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2353c-1;rank=1 Chromosome ena CDS 2634528 2635592 . - 0 ID=CDS:Rv2353c;Parent=transcript:Rv2353c;protein_id=Rv2353c ### -Chromosome ena_mobile_element biological_region 2635577 2636931 . + . external_name=IS6110-8%2C len: 1355 nt. Insertion sequence IS6110 element that appears to have inserted in 5'-end of MTCY98.031c but is not flanked by expected 3 bp direct repeats of target sequence.;logic_name=ena_mobile_element -Chromosome ena gene 2635628 2635954 . + . ID=gene:Rv2354;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2354;logic_name=ena +Chromosome ena_mobile_element biological_region 2635577 2636931 . + . external_name=IS6110-8%2C len: 1355 nt. Insertion sequence IS6110 element that appears to have inserted in 5'-end of MTCY98.031c but is not flanked by expected 3 bp direct repeats of target sequence.;logic_name=ena_mobile_element +Chromosome ena gene 2635628 2635954 . + . ID=gene:Rv2354;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2354;logic_name=ena Chromosome ena mRNA 2635628 2635954 . + . ID=transcript:Rv2354;Parent=gene:Rv2354;biotype=protein_coding;transcript_id=Rv2354 Chromosome ena exon 2635628 2635954 . + . Parent=transcript:Rv2354;Name=Rv2354-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2354-1;rank=1 Chromosome ena CDS 2635628 2635954 . + 0 ID=CDS:Rv2354;Parent=transcript:Rv2354;protein_id=Rv2354 ### -Chromosome ena gene 2635903 2636889 . + . ID=gene:Rv2355;biotype=protein_coding;description=Probable transposase;gene_id=Rv2355;logic_name=ena +Chromosome ena gene 2635903 2636889 . + . ID=gene:Rv2355;biotype=protein_coding;description=Probable transposase;gene_id=Rv2355;logic_name=ena Chromosome ena mRNA 2635903 2636889 . + . ID=transcript:Rv2355;Parent=gene:Rv2355;biotype=protein_coding;transcript_id=Rv2355 Chromosome ena exon 2635903 2636889 . + . Parent=transcript:Rv2355;Name=Rv2355-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2355-1;rank=1 Chromosome ena CDS 2635903 2636889 . + 0 ID=CDS:Rv2355;Parent=transcript:Rv2355;protein_id=Rv2355 ### -Chromosome ena gene 2637688 2639535 . - . ID=gene:Rv2356c;Name=PPE40;biotype=protein_coding;description=PPE family protein PPE40;gene_id=Rv2356c;logic_name=ena +Chromosome ena gene 2637688 2639535 . - . ID=gene:Rv2356c;Name=PPE40;biotype=protein_coding;description=PPE family protein PPE40;gene_id=Rv2356c;logic_name=ena Chromosome ena mRNA 2637688 2639535 . - . ID=transcript:Rv2356c;Parent=gene:Rv2356c;Name=PPE40-1;biotype=protein_coding;transcript_id=Rv2356c Chromosome ena exon 2637688 2639535 . - . Parent=transcript:Rv2356c;Name=Rv2356c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2356c-1;rank=1 Chromosome ena CDS 2637688 2639535 . - 0 ID=CDS:Rv2356c;Parent=transcript:Rv2356c;protein_id=Rv2356c ### -Chromosome ena gene 2639673 2641064 . - . ID=gene:Rv2357c;Name=glyS;biotype=protein_coding;description=Probable glycyl-tRNA synthetase GlyS (glycine--tRNA ligase) (GLYRS);gene_id=Rv2357c;logic_name=ena +Chromosome ena gene 2639673 2641064 . - . ID=gene:Rv2357c;Name=glyS;biotype=protein_coding;description=Probable glycyl-tRNA synthetase GlyS (glycine--tRNA ligase) (GLYRS);gene_id=Rv2357c;logic_name=ena Chromosome ena mRNA 2639673 2641064 . - . ID=transcript:Rv2357c;Parent=gene:Rv2357c;Name=glyS-1;biotype=protein_coding;transcript_id=Rv2357c Chromosome ena exon 2639673 2641064 . - . Parent=transcript:Rv2357c;Name=Rv2357c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2357c-1;rank=1 Chromosome ena CDS 2639673 2641064 . - 0 ID=CDS:Rv2357c;Parent=transcript:Rv2357c;protein_id=Rv2357c ### -Chromosome ena gene 2641246 2641653 . + . ID=gene:Rv2358;Name=smtB;biotype=protein_coding;description=Probable transcriptional regulatory protein SmtB (probably ArsR-family);gene_id=Rv2358;logic_name=ena +Chromosome ena gene 2641246 2641653 . + . ID=gene:Rv2358;Name=smtB;biotype=protein_coding;description=Probable transcriptional regulatory protein SmtB (probably ArsR-family);gene_id=Rv2358;logic_name=ena Chromosome ena mRNA 2641246 2641653 . + . ID=transcript:Rv2358;Parent=gene:Rv2358;Name=smtB-1;biotype=protein_coding;transcript_id=Rv2358 Chromosome ena exon 2641246 2641653 . + . Parent=transcript:Rv2358;Name=Rv2358-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2358-1;rank=1 Chromosome ena CDS 2641246 2641653 . + 0 ID=CDS:Rv2358;Parent=transcript:Rv2358;protein_id=Rv2358 ### -Chromosome ena gene 2641650 2642042 . + . ID=gene:Rv2359;Name=zur;biotype=protein_coding;description=Probable zinc uptake regulation protein Zur;gene_id=Rv2359;logic_name=ena +Chromosome ena gene 2641650 2642042 . + . ID=gene:Rv2359;Name=zur;biotype=protein_coding;description=Probable zinc uptake regulation protein Zur;gene_id=Rv2359;logic_name=ena Chromosome ena mRNA 2641650 2642042 . + . ID=transcript:Rv2359;Parent=gene:Rv2359;Name=zur-1;biotype=protein_coding;transcript_id=Rv2359 Chromosome ena exon 2641650 2642042 . + . Parent=transcript:Rv2359;Name=Rv2359-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2359-1;rank=1 Chromosome ena CDS 2641650 2642042 . + 0 ID=CDS:Rv2359;Parent=transcript:Rv2359;protein_id=Rv2359 ### -Chromosome ena gene 2642150 2642578 . - . ID=gene:Rv2360c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2360c;logic_name=ena +Chromosome ena gene 2642150 2642578 . - . ID=gene:Rv2360c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2360c;logic_name=ena Chromosome ena mRNA 2642150 2642578 . - . ID=transcript:Rv2360c;Parent=gene:Rv2360c;biotype=protein_coding;transcript_id=Rv2360c Chromosome ena exon 2642150 2642578 . - . Parent=transcript:Rv2360c;Name=Rv2360c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2360c-1;rank=1 Chromosome ena CDS 2642150 2642578 . - 0 ID=CDS:Rv2360c;Parent=transcript:Rv2360c;protein_id=Rv2360c ### -Chromosome ena gene 2642578 2643468 . - . ID=gene:Rv2361c;biotype=protein_coding;description=Long (C50) chain Z-isoprenyl diphosphate synthase (Z-decaprenyl diphosphate synthase);gene_id=Rv2361c;logic_name=ena +Chromosome ena gene 2642578 2643468 . - . ID=gene:Rv2361c;biotype=protein_coding;description=Long (C50) chain Z-isoprenyl diphosphate synthase (Z-decaprenyl diphosphate synthase);gene_id=Rv2361c;logic_name=ena Chromosome ena mRNA 2642578 2643468 . - . ID=transcript:Rv2361c;Parent=gene:Rv2361c;biotype=protein_coding;transcript_id=Rv2361c Chromosome ena exon 2642578 2643468 . - . Parent=transcript:Rv2361c;Name=Rv2361c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2361c-1;rank=1 Chromosome ena CDS 2642578 2643468 . - 0 ID=CDS:Rv2361c;Parent=transcript:Rv2361c;protein_id=Rv2361c ### -Chromosome ena gene 2643461 2644258 . - . ID=gene:Rv2362c;Name=recO;biotype=protein_coding;description=Possible DNA repair protein RecO;gene_id=Rv2362c;logic_name=ena +Chromosome ena gene 2643461 2644258 . - . ID=gene:Rv2362c;Name=recO;biotype=protein_coding;description=Possible DNA repair protein RecO;gene_id=Rv2362c;logic_name=ena Chromosome ena mRNA 2643461 2644258 . - . ID=transcript:Rv2362c;Parent=gene:Rv2362c;Name=recO-1;biotype=protein_coding;transcript_id=Rv2362c Chromosome ena exon 2643461 2644258 . - . Parent=transcript:Rv2362c;Name=Rv2362c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2362c-1;rank=1 Chromosome ena CDS 2643461 2644258 . - 0 ID=CDS:Rv2362c;Parent=transcript:Rv2362c;protein_id=Rv2362c ### -Chromosome ena gene 2644320 2645774 . + . ID=gene:Rv2363;Name=amiA2;biotype=protein_coding;description=Probable amidase AmiA2 (aminohydrolase);gene_id=Rv2363;logic_name=ena +Chromosome ena gene 2644320 2645774 . + . ID=gene:Rv2363;Name=amiA2;biotype=protein_coding;description=Probable amidase AmiA2 (aminohydrolase);gene_id=Rv2363;logic_name=ena Chromosome ena mRNA 2644320 2645774 . + . ID=transcript:Rv2363;Parent=gene:Rv2363;Name=amiA2-1;biotype=protein_coding;transcript_id=Rv2363 Chromosome ena exon 2644320 2645774 . + . Parent=transcript:Rv2363;Name=Rv2363-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2363-1;rank=1 Chromosome ena CDS 2644320 2645774 . + 0 ID=CDS:Rv2363;Parent=transcript:Rv2363;protein_id=Rv2363 ### -Chromosome ena gene 2645771 2646673 . - . ID=gene:Rv2364c;Name=era;biotype=protein_coding;description=Probable GTP-binding protein Era;gene_id=Rv2364c;logic_name=ena +Chromosome ena gene 2645771 2646673 . - . ID=gene:Rv2364c;Name=era;biotype=protein_coding;description=Probable GTP-binding protein Era;gene_id=Rv2364c;logic_name=ena Chromosome ena mRNA 2645771 2646673 . - . ID=transcript:Rv2364c;Parent=gene:Rv2364c;Name=era-1;biotype=protein_coding;transcript_id=Rv2364c Chromosome ena exon 2645771 2646673 . - . Parent=transcript:Rv2364c;Name=Rv2364c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2364c-1;rank=1 Chromosome ena CDS 2645771 2646673 . - 0 ID=CDS:Rv2364c;Parent=transcript:Rv2364c;protein_id=Rv2364c ### -Chromosome ena gene 2646747 2647088 . - . ID=gene:Rv2365c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2365c;logic_name=ena +Chromosome ena gene 2646747 2647088 . - . ID=gene:Rv2365c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2365c;logic_name=ena Chromosome ena mRNA 2646747 2647088 . - . ID=transcript:Rv2365c;Parent=gene:Rv2365c;biotype=protein_coding;transcript_id=Rv2365c Chromosome ena exon 2646747 2647088 . - . Parent=transcript:Rv2365c;Name=Rv2365c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2365c-1;rank=1 Chromosome ena CDS 2646747 2647088 . - 0 ID=CDS:Rv2365c;Parent=transcript:Rv2365c;protein_id=Rv2365c ### -Chromosome ena gene 2647060 2648367 . - . ID=gene:Rv2366c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2366c;logic_name=ena +Chromosome ena gene 2647060 2648367 . - . ID=gene:Rv2366c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2366c;logic_name=ena Chromosome ena mRNA 2647060 2648367 . - . ID=transcript:Rv2366c;Parent=gene:Rv2366c;biotype=protein_coding;transcript_id=Rv2366c Chromosome ena exon 2647060 2648367 . - . Parent=transcript:Rv2366c;Name=Rv2366c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2366c-1;rank=1 Chromosome ena CDS 2647060 2648367 . - 0 ID=CDS:Rv2366c;Parent=transcript:Rv2366c;protein_id=Rv2366c ### -Chromosome ena gene 2648364 2648912 . - . ID=gene:Rv2367c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2367c;logic_name=ena +Chromosome ena gene 2648364 2648912 . - . ID=gene:Rv2367c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2367c;logic_name=ena Chromosome ena mRNA 2648364 2648912 . - . ID=transcript:Rv2367c;Parent=gene:Rv2367c;biotype=protein_coding;transcript_id=Rv2367c Chromosome ena exon 2648364 2648912 . - . Parent=transcript:Rv2367c;Name=Rv2367c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2367c-1;rank=1 Chromosome ena CDS 2648364 2648912 . - 0 ID=CDS:Rv2367c;Parent=transcript:Rv2367c;protein_id=Rv2367c ### -Chromosome ena gene 2648916 2649974 . - . ID=gene:Rv2368c;Name=phoH1;biotype=protein_coding;description=Probable PHOH-like protein PhoH1 (phosphate starvation-inducible protein PSIH);gene_id=Rv2368c;logic_name=ena +Chromosome ena gene 2648916 2649974 . - . ID=gene:Rv2368c;Name=phoH1;biotype=protein_coding;description=Probable PHOH-like protein PhoH1 (phosphate starvation-inducible protein PSIH);gene_id=Rv2368c;logic_name=ena Chromosome ena mRNA 2648916 2649974 . - . ID=transcript:Rv2368c;Parent=gene:Rv2368c;Name=phoH1-1;biotype=protein_coding;transcript_id=Rv2368c Chromosome ena exon 2648916 2649974 . - . Parent=transcript:Rv2368c;Name=Rv2368c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2368c-1;rank=1 Chromosome ena CDS 2648916 2649974 . - 0 ID=CDS:Rv2368c;Parent=transcript:Rv2368c;protein_id=Rv2368c ### -Chromosome ena gene 2649946 2650248 . - . ID=gene:Rv2369c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2369c;logic_name=ena +Chromosome ena gene 2649946 2650248 . - . ID=gene:Rv2369c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2369c;logic_name=ena Chromosome ena mRNA 2649946 2650248 . - . ID=transcript:Rv2369c;Parent=gene:Rv2369c;biotype=protein_coding;transcript_id=Rv2369c Chromosome ena exon 2649946 2650248 . - . Parent=transcript:Rv2369c;Name=Rv2369c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2369c-1;rank=1 Chromosome ena CDS 2649946 2650248 . - 0 ID=CDS:Rv2369c;Parent=transcript:Rv2369c;protein_id=Rv2369c ### -Chromosome ena gene 2650245 2651558 . - . ID=gene:Rv2370c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2370c;logic_name=ena +Chromosome ena gene 2650245 2651558 . - . ID=gene:Rv2370c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2370c;logic_name=ena Chromosome ena mRNA 2650245 2651558 . - . ID=transcript:Rv2370c;Parent=gene:Rv2370c;biotype=protein_coding;transcript_id=Rv2370c Chromosome ena exon 2650245 2651558 . - . Parent=transcript:Rv2370c;Name=Rv2370c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2370c-1;rank=1 Chromosome ena CDS 2650245 2651558 . - 0 ID=CDS:Rv2370c;Parent=transcript:Rv2370c;protein_id=Rv2370c ### -Chromosome ena gene 2651753 2651938 . + . ID=gene:Rv2371;Name=PE_PGRS40;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS40;gene_id=Rv2371;logic_name=ena +Chromosome ena gene 2651753 2651938 . + . ID=gene:Rv2371;Name=PE_PGRS40;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS40;gene_id=Rv2371;logic_name=ena Chromosome ena mRNA 2651753 2651938 . + . ID=transcript:Rv2371;Parent=gene:Rv2371;Name=PE_PGRS40-1;biotype=protein_coding;transcript_id=Rv2371 Chromosome ena exon 2651753 2651938 . + . Parent=transcript:Rv2371;Name=Rv2371-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2371-1;rank=1 Chromosome ena CDS 2651753 2651938 . + 0 ID=CDS:Rv2371;Parent=transcript:Rv2371;protein_id=Rv2371 ### -Chromosome ena gene 2652037 2652825 . - . ID=gene:Rv2372c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2372c;logic_name=ena +Chromosome ena gene 2652037 2652825 . - . ID=gene:Rv2372c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2372c;logic_name=ena Chromosome ena mRNA 2652037 2652825 . - . ID=transcript:Rv2372c;Parent=gene:Rv2372c;biotype=protein_coding;transcript_id=Rv2372c Chromosome ena exon 2652037 2652825 . - . Parent=transcript:Rv2372c;Name=Rv2372c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2372c-1;rank=1 Chromosome ena CDS 2652037 2652825 . - 0 ID=CDS:Rv2372c;Parent=transcript:Rv2372c;protein_id=Rv2372c ### -Chromosome ena gene 2652839 2653987 . - . ID=gene:Rv2373c;Name=dnaJ2;biotype=protein_coding;description=Probable chaperone protein DnaJ2;gene_id=Rv2373c;logic_name=ena +Chromosome ena gene 2652839 2653987 . - . ID=gene:Rv2373c;Name=dnaJ2;biotype=protein_coding;description=Probable chaperone protein DnaJ2;gene_id=Rv2373c;logic_name=ena Chromosome ena mRNA 2652839 2653987 . - . ID=transcript:Rv2373c;Parent=gene:Rv2373c;Name=dnaJ2-1;biotype=protein_coding;transcript_id=Rv2373c Chromosome ena exon 2652839 2653987 . - . Parent=transcript:Rv2373c;Name=Rv2373c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2373c-1;rank=1 Chromosome ena CDS 2652839 2653987 . - 0 ID=CDS:Rv2373c;Parent=transcript:Rv2373c;protein_id=Rv2373c ### -Chromosome ena gene 2654062 2655093 . - . ID=gene:Rv2374c;Name=hrcA;biotype=protein_coding;description=Probable heat shock protein transcriptional repressor HrcA;gene_id=Rv2374c;logic_name=ena +Chromosome ena gene 2654062 2655093 . - . ID=gene:Rv2374c;Name=hrcA;biotype=protein_coding;description=Probable heat shock protein transcriptional repressor HrcA;gene_id=Rv2374c;logic_name=ena Chromosome ena mRNA 2654062 2655093 . - . ID=transcript:Rv2374c;Parent=gene:Rv2374c;Name=hrcA-1;biotype=protein_coding;transcript_id=Rv2374c Chromosome ena exon 2654062 2655093 . - . Parent=transcript:Rv2374c;Name=Rv2374c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2374c-1;rank=1 Chromosome ena CDS 2654062 2655093 . - 0 ID=CDS:Rv2374c;Parent=transcript:Rv2374c;protein_id=Rv2374c ### -Chromosome ena gene 2655265 2655582 . + . ID=gene:Rv2375;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2375;logic_name=ena +Chromosome ena gene 2655265 2655582 . + . ID=gene:Rv2375;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2375;logic_name=ena Chromosome ena mRNA 2655265 2655582 . + . ID=transcript:Rv2375;Parent=gene:Rv2375;biotype=protein_coding;transcript_id=Rv2375 Chromosome ena exon 2655265 2655582 . + . Parent=transcript:Rv2375;Name=Rv2375-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2375-1;rank=1 Chromosome ena CDS 2655265 2655582 . + 0 ID=CDS:Rv2375;Parent=transcript:Rv2375;protein_id=Rv2375 ### -Chromosome ena gene 2655609 2656115 . - . ID=gene:Rv2376c;Name=cfp2;biotype=protein_coding;description=Low molecular weight antigen CFP2 (low molecular weight protein antigen 2) (CFP-2);gene_id=Rv2376c;logic_name=ena +Chromosome ena gene 2655609 2656115 . - . ID=gene:Rv2376c;Name=cfp2;biotype=protein_coding;description=Low molecular weight antigen CFP2 (low molecular weight protein antigen 2) (CFP-2);gene_id=Rv2376c;logic_name=ena Chromosome ena mRNA 2655609 2656115 . - . ID=transcript:Rv2376c;Parent=gene:Rv2376c;Name=cfp2-1;biotype=protein_coding;transcript_id=Rv2376c Chromosome ena exon 2655609 2656115 . - . Parent=transcript:Rv2376c;Name=Rv2376c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2376c-1;rank=1 Chromosome ena CDS 2655609 2656115 . - 0 ID=CDS:Rv2376c;Parent=transcript:Rv2376c;protein_id=Rv2376c ### -Chromosome ena gene 2656215 2656430 . - . ID=gene:Rv2377c;Name=mbtH;biotype=protein_coding;description=Putative conserved protein MbtH;gene_id=Rv2377c;logic_name=ena +Chromosome ena gene 2656215 2656430 . - . ID=gene:Rv2377c;Name=mbtH;biotype=protein_coding;description=Putative conserved protein MbtH;gene_id=Rv2377c;logic_name=ena Chromosome ena mRNA 2656215 2656430 . - . ID=transcript:Rv2377c;Parent=gene:Rv2377c;Name=mbtH-1;biotype=protein_coding;transcript_id=Rv2377c Chromosome ena exon 2656215 2656430 . - . Parent=transcript:Rv2377c;Name=Rv2377c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2377c-1;rank=1 Chromosome ena CDS 2656215 2656430 . - 0 ID=CDS:Rv2377c;Parent=transcript:Rv2377c;protein_id=Rv2377c ### -Chromosome ena gene 2656408 2657703 . - . ID=gene:Rv2378c;Name=mbtG;biotype=protein_coding;description=Lysine-N-oxygenase MbtG (L-lysine 6-monooxygenase) (lysine N6-hydroxylase);gene_id=Rv2378c;logic_name=ena +Chromosome ena gene 2656408 2657703 . - . ID=gene:Rv2378c;Name=mbtG;biotype=protein_coding;description=Lysine-N-oxygenase MbtG (L-lysine 6-monooxygenase) (lysine N6-hydroxylase);gene_id=Rv2378c;logic_name=ena Chromosome ena mRNA 2656408 2657703 . - . ID=transcript:Rv2378c;Parent=gene:Rv2378c;Name=mbtG-1;biotype=protein_coding;transcript_id=Rv2378c Chromosome ena exon 2656408 2657703 . - . Parent=transcript:Rv2378c;Name=Rv2378c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2378c-1;rank=1 Chromosome ena CDS 2656408 2657703 . - 0 ID=CDS:Rv2378c;Parent=transcript:Rv2378c;protein_id=Rv2378c ### -Chromosome ena gene 2657700 2662085 . - . ID=gene:Rv2379c;Name=mbtF;biotype=protein_coding;description=Peptide synthetase MbtF (peptide synthase);gene_id=Rv2379c;logic_name=ena +Chromosome ena gene 2657700 2662085 . - . ID=gene:Rv2379c;Name=mbtF;biotype=protein_coding;description=Peptide synthetase MbtF (peptide synthase);gene_id=Rv2379c;logic_name=ena Chromosome ena mRNA 2657700 2662085 . - . ID=transcript:Rv2379c;Parent=gene:Rv2379c;Name=mbtF-1;biotype=protein_coding;transcript_id=Rv2379c Chromosome ena exon 2657700 2662085 . - . Parent=transcript:Rv2379c;Name=Rv2379c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2379c-1;rank=1 Chromosome ena CDS 2657700 2662085 . - 0 ID=CDS:Rv2379c;Parent=transcript:Rv2379c;protein_id=Rv2379c ### -Chromosome ena gene 2662067 2667115 . - . ID=gene:Rv2380c;Name=mbtE;biotype=protein_coding;description=Peptide synthetase MbtE (peptide synthase);gene_id=Rv2380c;logic_name=ena +Chromosome ena gene 2662067 2667115 . - . ID=gene:Rv2380c;Name=mbtE;biotype=protein_coding;description=Peptide synthetase MbtE (peptide synthase);gene_id=Rv2380c;logic_name=ena Chromosome ena mRNA 2662067 2667115 . - . ID=transcript:Rv2380c;Parent=gene:Rv2380c;Name=mbtE-1;biotype=protein_coding;transcript_id=Rv2380c Chromosome ena exon 2662067 2667115 . - . Parent=transcript:Rv2380c;Name=Rv2380c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2380c-1;rank=1 Chromosome ena CDS 2662067 2667115 . - 0 ID=CDS:Rv2380c;Parent=transcript:Rv2380c;protein_id=Rv2380c ### -Chromosome ena gene 2667255 2670269 . - . ID=gene:Rv2381c;Name=mbtD;biotype=protein_coding;description=Polyketide synthetase MbtD (polyketide synthase);gene_id=Rv2381c;logic_name=ena +Chromosome ena gene 2667255 2670269 . - . ID=gene:Rv2381c;Name=mbtD;biotype=protein_coding;description=Polyketide synthetase MbtD (polyketide synthase);gene_id=Rv2381c;logic_name=ena Chromosome ena mRNA 2667255 2670269 . - . ID=transcript:Rv2381c;Parent=gene:Rv2381c;Name=mbtD-1;biotype=protein_coding;transcript_id=Rv2381c Chromosome ena exon 2667255 2670269 . - . Parent=transcript:Rv2381c;Name=Rv2381c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2381c-1;rank=1 Chromosome ena CDS 2667255 2670269 . - 0 ID=CDS:Rv2381c;Parent=transcript:Rv2381c;protein_id=Rv2381c ### -Chromosome ena gene 2670269 2671603 . - . ID=gene:Rv2382c;Name=mbtC;biotype=protein_coding;description=Polyketide synthetase MbtC (polyketide synthase);gene_id=Rv2382c;logic_name=ena +Chromosome ena gene 2670269 2671603 . - . ID=gene:Rv2382c;Name=mbtC;biotype=protein_coding;description=Polyketide synthetase MbtC (polyketide synthase);gene_id=Rv2382c;logic_name=ena Chromosome ena mRNA 2670269 2671603 . - . ID=transcript:Rv2382c;Parent=gene:Rv2382c;Name=mbtC-1;biotype=protein_coding;transcript_id=Rv2382c Chromosome ena exon 2670269 2671603 . - . Parent=transcript:Rv2382c;Name=Rv2382c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2382c-1;rank=1 Chromosome ena CDS 2670269 2671603 . - 0 ID=CDS:Rv2382c;Parent=transcript:Rv2382c;protein_id=Rv2382c ### -Chromosome ena gene 2671593 2675837 . - . ID=gene:Rv2383c;Name=mbtB;biotype=protein_coding;description=Phenyloxazoline synthase MbtB (phenyloxazoline synthetase);gene_id=Rv2383c;logic_name=ena +Chromosome ena gene 2671593 2675837 . - . ID=gene:Rv2383c;Name=mbtB;biotype=protein_coding;description=Phenyloxazoline synthase MbtB (phenyloxazoline synthetase);gene_id=Rv2383c;logic_name=ena Chromosome ena mRNA 2671593 2675837 . - . ID=transcript:Rv2383c;Parent=gene:Rv2383c;Name=mbtB-1;biotype=protein_coding;transcript_id=Rv2383c Chromosome ena exon 2671593 2675837 . - . Parent=transcript:Rv2383c;Name=Rv2383c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2383c-1;rank=1 Chromosome ena CDS 2671593 2675837 . - 0 ID=CDS:Rv2383c;Parent=transcript:Rv2383c;protein_id=Rv2383c ### -Chromosome ena gene 2675936 2677633 . + . ID=gene:Rv2384;Name=mbtA;biotype=protein_coding;description=Bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ArCP synthetase;gene_id=Rv2384;logic_name=ena +Chromosome ena gene 2675936 2677633 . + . ID=gene:Rv2384;Name=mbtA;biotype=protein_coding;description=Bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ArCP synthetase;gene_id=Rv2384;logic_name=ena Chromosome ena mRNA 2675936 2677633 . + . ID=transcript:Rv2384;Parent=gene:Rv2384;Name=mbtA-1;biotype=protein_coding;transcript_id=Rv2384 Chromosome ena exon 2675936 2677633 . + . Parent=transcript:Rv2384;Name=Rv2384-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2384-1;rank=1 Chromosome ena CDS 2675936 2677633 . + 0 ID=CDS:Rv2384;Parent=transcript:Rv2384;protein_id=Rv2384 ### -Chromosome ena gene 2677729 2678649 . + . ID=gene:Rv2385;Name=mbtJ;biotype=protein_coding;description=Putative acetyl hydrolase MbtJ;gene_id=Rv2385;logic_name=ena +Chromosome ena gene 2677729 2678649 . + . ID=gene:Rv2385;Name=mbtJ;biotype=protein_coding;description=Putative acetyl hydrolase MbtJ;gene_id=Rv2385;logic_name=ena Chromosome ena mRNA 2677729 2678649 . + . ID=transcript:Rv2385;Parent=gene:Rv2385;Name=mbtJ-1;biotype=protein_coding;transcript_id=Rv2385 Chromosome ena exon 2677729 2678649 . + . Parent=transcript:Rv2385;Name=Rv2385-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2385-1;rank=1 Chromosome ena CDS 2677729 2678649 . + 0 ID=CDS:Rv2385;Parent=transcript:Rv2385;protein_id=Rv2385 ### -Chromosome ena gene 2678653 2680005 . - . ID=gene:Rv2386c;Name=mbtI;biotype=protein_coding;description=Isochorismate synthase MbtI;gene_id=Rv2386c;logic_name=ena +Chromosome ena gene 2678653 2680005 . - . ID=gene:Rv2386c;Name=mbtI;biotype=protein_coding;description=Isochorismate synthase MbtI;gene_id=Rv2386c;logic_name=ena Chromosome ena mRNA 2678653 2680005 . - . ID=transcript:Rv2386c;Parent=gene:Rv2386c;Name=mbtI-1;biotype=protein_coding;transcript_id=Rv2386c Chromosome ena exon 2678653 2680005 . - . Parent=transcript:Rv2386c;Name=Rv2386c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2386c-1;rank=1 Chromosome ena CDS 2678653 2680005 . - 0 ID=CDS:Rv2386c;Parent=transcript:Rv2386c;protein_id=Rv2386c ### -Chromosome ena gene 2680765 2682018 . + . ID=gene:Rv2387;biotype=protein_coding;description=Conserved protein;gene_id=Rv2387;logic_name=ena +Chromosome ena gene 2680765 2682018 . + . ID=gene:Rv2387;biotype=protein_coding;description=Conserved protein;gene_id=Rv2387;logic_name=ena Chromosome ena mRNA 2680765 2682018 . + . ID=transcript:Rv2387;Parent=gene:Rv2387;biotype=protein_coding;transcript_id=Rv2387 Chromosome ena exon 2680765 2682018 . + . Parent=transcript:Rv2387;Name=Rv2387-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2387-1;rank=1 Chromosome ena CDS 2680765 2682018 . + 0 ID=CDS:Rv2387;Parent=transcript:Rv2387;protein_id=Rv2387 ### -Chromosome ena gene 2682015 2683142 . - . ID=gene:Rv2388c;Name=hemN;biotype=protein_coding;description=Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase);gene_id=Rv2388c;logic_name=ena +Chromosome ena gene 2682015 2683142 . - . ID=gene:Rv2388c;Name=hemN;biotype=protein_coding;description=Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase);gene_id=Rv2388c;logic_name=ena Chromosome ena mRNA 2682015 2683142 . - . ID=transcript:Rv2388c;Parent=gene:Rv2388c;Name=hemN-1;biotype=protein_coding;transcript_id=Rv2388c Chromosome ena exon 2682015 2683142 . - . Parent=transcript:Rv2388c;Name=Rv2388c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2388c-1;rank=1 Chromosome ena CDS 2682015 2683142 . - 0 ID=CDS:Rv2388c;Parent=transcript:Rv2388c;protein_id=Rv2388c ### -Chromosome ena gene 2683248 2683712 . - . ID=gene:Rv2389c;Name=rpfD;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfD;gene_id=Rv2389c;logic_name=ena +Chromosome ena gene 2683248 2683712 . - . ID=gene:Rv2389c;Name=rpfD;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfD;gene_id=Rv2389c;logic_name=ena Chromosome ena mRNA 2683248 2683712 . - . ID=transcript:Rv2389c;Parent=gene:Rv2389c;Name=rpfD-1;biotype=protein_coding;transcript_id=Rv2389c Chromosome ena exon 2683248 2683712 . - . Parent=transcript:Rv2389c;Name=Rv2389c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2389c-1;rank=1 Chromosome ena CDS 2683248 2683712 . - 0 ID=CDS:Rv2389c;Parent=transcript:Rv2389c;protein_id=Rv2389c ### -Chromosome ena gene 2683709 2684266 . - . ID=gene:Rv2390c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2390c;logic_name=ena +Chromosome ena gene 2683709 2684266 . - . ID=gene:Rv2390c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2390c;logic_name=ena Chromosome ena mRNA 2683709 2684266 . - . ID=transcript:Rv2390c;Parent=gene:Rv2390c;biotype=protein_coding;transcript_id=Rv2390c Chromosome ena exon 2683709 2684266 . - . Parent=transcript:Rv2390c;Name=Rv2390c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2390c-1;rank=1 Chromosome ena CDS 2683709 2684266 . - 0 ID=CDS:Rv2390c;Parent=transcript:Rv2390c;protein_id=Rv2390c ### -Chromosome ena gene 2684679 2686370 . + . ID=gene:Rv2391;Name=sirA;biotype=protein_coding;description=Ferredoxin-dependent sulfite reductase SirA;gene_id=Rv2391;logic_name=ena +Chromosome ena gene 2684679 2686370 . + . ID=gene:Rv2391;Name=sirA;biotype=protein_coding;description=Ferredoxin-dependent sulfite reductase SirA;gene_id=Rv2391;logic_name=ena Chromosome ena mRNA 2684679 2686370 . + . ID=transcript:Rv2391;Parent=gene:Rv2391;Name=sirA-1;biotype=protein_coding;transcript_id=Rv2391 Chromosome ena exon 2684679 2686370 . + . Parent=transcript:Rv2391;Name=Rv2391-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2391-1;rank=1 Chromosome ena CDS 2684679 2686370 . + 0 ID=CDS:Rv2391;Parent=transcript:Rv2391;protein_id=Rv2391 ### -Chromosome ena gene 2686367 2687131 . + . ID=gene:Rv2392;Name=cysH;biotype=protein_coding;description=Probable 3'-phosphoadenosine 5'-phosphosulfate reductase CysH (PAPS reductase%2C thioredoxin DEP.) (padops reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase);gene_id=Rv2392;logic_name=ena +Chromosome ena gene 2686367 2687131 . + . ID=gene:Rv2392;Name=cysH;biotype=protein_coding;description=Probable 3'-phosphoadenosine 5'-phosphosulfate reductase CysH (PAPS reductase%2C thioredoxin DEP.) (padops reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase);gene_id=Rv2392;logic_name=ena Chromosome ena mRNA 2686367 2687131 . + . ID=transcript:Rv2392;Parent=gene:Rv2392;Name=cysH-1;biotype=protein_coding;transcript_id=Rv2392 Chromosome ena exon 2686367 2687131 . + . Parent=transcript:Rv2392;Name=Rv2392-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2392-1;rank=1 Chromosome ena CDS 2686367 2687131 . + 0 ID=CDS:Rv2392;Parent=transcript:Rv2392;protein_id=Rv2392 ### -Chromosome ena gene 2687128 2687973 . + . ID=gene:Rv2393;Name=che1;biotype=protein_coding;description=Ferrochelatase Che1;gene_id=Rv2393;logic_name=ena +Chromosome ena gene 2687128 2687973 . + . ID=gene:Rv2393;Name=che1;biotype=protein_coding;description=Ferrochelatase Che1;gene_id=Rv2393;logic_name=ena Chromosome ena mRNA 2687128 2687973 . + . ID=transcript:Rv2393;Parent=gene:Rv2393;Name=che1-1;biotype=protein_coding;transcript_id=Rv2393 Chromosome ena exon 2687128 2687973 . + . Parent=transcript:Rv2393;Name=Rv2393-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2393-1;rank=1 Chromosome ena CDS 2687128 2687973 . + 0 ID=CDS:Rv2393;Parent=transcript:Rv2393;protein_id=Rv2393 ### -Chromosome ena gene 2688010 2689941 . + . ID=gene:Rv2394;Name=ggtB;biotype=protein_coding;description=Probable gamma-glutamyltranspeptidase precursor GgtB (gamma-glutamyltransferase) (glutamyl transpeptidase);gene_id=Rv2394;logic_name=ena +Chromosome ena gene 2688010 2689941 . + . ID=gene:Rv2394;Name=ggtB;biotype=protein_coding;description=Probable gamma-glutamyltranspeptidase precursor GgtB (gamma-glutamyltransferase) (glutamyl transpeptidase);gene_id=Rv2394;logic_name=ena Chromosome ena mRNA 2688010 2689941 . + . ID=transcript:Rv2394;Parent=gene:Rv2394;Name=ggtB-1;biotype=protein_coding;transcript_id=Rv2394 Chromosome ena exon 2688010 2689941 . + . Parent=transcript:Rv2394;Name=Rv2394-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2394-1;rank=1 Chromosome ena CDS 2688010 2689941 . + 0 ID=CDS:Rv2394;Parent=transcript:Rv2394;protein_id=Rv2394 ### -Chromosome ena gene 2690072 2692075 . + . ID=gene:Rv2395;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2395;logic_name=ena +Chromosome ena gene 2690072 2692075 . + . ID=gene:Rv2395;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2395;logic_name=ena Chromosome ena mRNA 2690072 2692075 . + . ID=transcript:Rv2395;Parent=gene:Rv2395;biotype=protein_coding;transcript_id=Rv2395 Chromosome ena exon 2690072 2692075 . + . Parent=transcript:Rv2395;Name=Rv2395-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2395-1;rank=1 Chromosome ena CDS 2690072 2692075 . + 0 ID=CDS:Rv2395;Parent=transcript:Rv2395;protein_id=Rv2395 @@ -12577,362 +12577,362 @@ Chromosome ena transcript 2692172 2692521 . + . ID=transcript:EBG00000313380;Par Chromosome ena exon 2692172 2692521 . + . Parent=transcript:EBG00000313380;Name=EBG00000313380;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313380;rank=1 ### Chromosome ena_gene biological_region 2692172 2692521 . + . external_name=AL123456.3:gene:2692172..2692521;logic_name=ena_gene -Chromosome ena gene 2692224 2692439 . + . ID=gene:Rv2395A;Name=aprA;biotype=protein_coding;description=Acid and phagosome regulated protein A AprA;gene_id=Rv2395A;logic_name=ena +Chromosome ena gene 2692224 2692439 . + . ID=gene:Rv2395A;Name=aprA;biotype=protein_coding;description=Acid and phagosome regulated protein A AprA;gene_id=Rv2395A;logic_name=ena Chromosome ena mRNA 2692224 2692439 . + . ID=transcript:Rv2395A;Parent=gene:Rv2395A;Name=aprA-1;biotype=protein_coding;transcript_id=Rv2395A Chromosome ena exon 2692224 2692439 . + . Parent=transcript:Rv2395A;Name=Rv2395A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2395A-1;rank=1 Chromosome ena CDS 2692224 2692439 . + 0 ID=CDS:Rv2395A;Parent=transcript:Rv2395A;protein_id=Rv2395A ### -Chromosome ena gene 2692551 2692715 . + . ID=gene:Rv2395B;Name=aprB;biotype=protein_coding;description=Acid and phagosome regulated protein B AprB;gene_id=Rv2395B;logic_name=ena +Chromosome ena gene 2692551 2692715 . + . ID=gene:Rv2395B;Name=aprB;biotype=protein_coding;description=Acid and phagosome regulated protein B AprB;gene_id=Rv2395B;logic_name=ena Chromosome ena mRNA 2692551 2692715 . + . ID=transcript:Rv2395B;Parent=gene:Rv2395B;Name=aprB-1;biotype=protein_coding;transcript_id=Rv2395B Chromosome ena exon 2692551 2692715 . + . Parent=transcript:Rv2395B;Name=Rv2395B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2395B-1;rank=1 Chromosome ena CDS 2692551 2692715 . + 0 ID=CDS:Rv2395B;Parent=transcript:Rv2395B;protein_id=Rv2395B ### -Chromosome ena gene 2692799 2693884 . + . ID=gene:Rv2396;Name=PE_PGRS41;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS41;gene_id=Rv2396;logic_name=ena +Chromosome ena gene 2692799 2693884 . + . ID=gene:Rv2396;Name=PE_PGRS41;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS41;gene_id=Rv2396;logic_name=ena Chromosome ena mRNA 2692799 2693884 . + . ID=transcript:Rv2396;Parent=gene:Rv2396;Name=PE_PGRS41-1;biotype=protein_coding;transcript_id=Rv2396 Chromosome ena exon 2692799 2693884 . + . Parent=transcript:Rv2396;Name=Rv2396-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2396-1;rank=1 Chromosome ena CDS 2692799 2693884 . + 0 ID=CDS:Rv2396;Parent=transcript:Rv2396;protein_id=Rv2396 ### -Chromosome ena gene 2693909 2694964 . - . ID=gene:Rv2397c;Name=cysA1;biotype=protein_coding;description=Sulfate-transport ATP-binding protein ABC transporter CysA1;gene_id=Rv2397c;logic_name=ena +Chromosome ena gene 2693909 2694964 . - . ID=gene:Rv2397c;Name=cysA1;biotype=protein_coding;description=Sulfate-transport ATP-binding protein ABC transporter CysA1;gene_id=Rv2397c;logic_name=ena Chromosome ena mRNA 2693909 2694964 . - . ID=transcript:Rv2397c;Parent=gene:Rv2397c;Name=cysA1-1;biotype=protein_coding;transcript_id=Rv2397c Chromosome ena exon 2693909 2694964 . - . Parent=transcript:Rv2397c;Name=Rv2397c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2397c-1;rank=1 Chromosome ena CDS 2693909 2694964 . - 0 ID=CDS:Rv2397c;Parent=transcript:Rv2397c;protein_id=Rv2397c ### -Chromosome ena gene 2694981 2695799 . - . ID=gene:Rv2398c;Name=cysW;biotype=protein_coding;description=Probable sulfate-transport integral membrane protein ABC transporter CysW;gene_id=Rv2398c;logic_name=ena +Chromosome ena gene 2694981 2695799 . - . ID=gene:Rv2398c;Name=cysW;biotype=protein_coding;description=Probable sulfate-transport integral membrane protein ABC transporter CysW;gene_id=Rv2398c;logic_name=ena Chromosome ena mRNA 2694981 2695799 . - . ID=transcript:Rv2398c;Parent=gene:Rv2398c;Name=cysW-1;biotype=protein_coding;transcript_id=Rv2398c Chromosome ena exon 2694981 2695799 . - . Parent=transcript:Rv2398c;Name=Rv2398c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2398c-1;rank=1 Chromosome ena CDS 2694981 2695799 . - 0 ID=CDS:Rv2398c;Parent=transcript:Rv2398c;protein_id=Rv2398c ### -Chromosome ena gene 2695796 2696647 . - . ID=gene:Rv2399c;Name=cysT;biotype=protein_coding;description=Probable sulfate-transport integral membrane protein ABC transporter CysT;gene_id=Rv2399c;logic_name=ena +Chromosome ena gene 2695796 2696647 . - . ID=gene:Rv2399c;Name=cysT;biotype=protein_coding;description=Probable sulfate-transport integral membrane protein ABC transporter CysT;gene_id=Rv2399c;logic_name=ena Chromosome ena mRNA 2695796 2696647 . - . ID=transcript:Rv2399c;Parent=gene:Rv2399c;Name=cysT-1;biotype=protein_coding;transcript_id=Rv2399c Chromosome ena exon 2695796 2696647 . - . Parent=transcript:Rv2399c;Name=Rv2399c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2399c-1;rank=1 Chromosome ena CDS 2695796 2696647 . - 0 ID=CDS:Rv2399c;Parent=transcript:Rv2399c;protein_id=Rv2399c ### -Chromosome ena gene 2696644 2697714 . - . ID=gene:Rv2400c;Name=subI;biotype=protein_coding;description=Probable sulfate-binding lipoprotein SubI;gene_id=Rv2400c;logic_name=ena +Chromosome ena gene 2696644 2697714 . - . ID=gene:Rv2400c;Name=subI;biotype=protein_coding;description=Probable sulfate-binding lipoprotein SubI;gene_id=Rv2400c;logic_name=ena Chromosome ena mRNA 2696644 2697714 . - . ID=transcript:Rv2400c;Parent=gene:Rv2400c;Name=subI-1;biotype=protein_coding;transcript_id=Rv2400c Chromosome ena exon 2696644 2697714 . - . Parent=transcript:Rv2400c;Name=Rv2400c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2400c-1;rank=1 Chromosome ena CDS 2696644 2697714 . - 0 ID=CDS:Rv2400c;Parent=transcript:Rv2400c;protein_id=Rv2400c ### -Chromosome ena gene 2697728 2698057 . + . ID=gene:Rv2401;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2401;logic_name=ena +Chromosome ena gene 2697728 2698057 . + . ID=gene:Rv2401;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2401;logic_name=ena Chromosome ena mRNA 2697728 2698057 . + . ID=transcript:Rv2401;Parent=gene:Rv2401;biotype=protein_coding;transcript_id=Rv2401 Chromosome ena exon 2697728 2698057 . + . Parent=transcript:Rv2401;Name=Rv2401-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2401-1;rank=1 Chromosome ena CDS 2697728 2698057 . + 0 ID=CDS:Rv2401;Parent=transcript:Rv2401;protein_id=Rv2401 ### -Chromosome ena gene 2698042 2698245 . - . ID=gene:Rv2401A;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2401A;logic_name=ena +Chromosome ena gene 2698042 2698245 . - . ID=gene:Rv2401A;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2401A;logic_name=ena Chromosome ena mRNA 2698042 2698245 . - . ID=transcript:Rv2401A;Parent=gene:Rv2401A;biotype=protein_coding;transcript_id=Rv2401A Chromosome ena exon 2698042 2698245 . - . Parent=transcript:Rv2401A;Name=Rv2401A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2401A-1;rank=1 Chromosome ena CDS 2698042 2698245 . - 0 ID=CDS:Rv2401A;Parent=transcript:Rv2401A;protein_id=Rv2401A ### -Chromosome ena gene 2698529 2700457 . + . ID=gene:Rv2402;biotype=protein_coding;description=Conserved protein;gene_id=Rv2402;logic_name=ena +Chromosome ena gene 2698529 2700457 . + . ID=gene:Rv2402;biotype=protein_coding;description=Conserved protein;gene_id=Rv2402;logic_name=ena Chromosome ena mRNA 2698529 2700457 . + . ID=transcript:Rv2402;Parent=gene:Rv2402;biotype=protein_coding;transcript_id=Rv2402 Chromosome ena exon 2698529 2700457 . + . Parent=transcript:Rv2402;Name=Rv2402-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2402-1;rank=1 Chromosome ena CDS 2698529 2700457 . + 0 ID=CDS:Rv2402;Parent=transcript:Rv2402;protein_id=Rv2402 ### -Chromosome ena gene 2700535 2701290 . - . ID=gene:Rv2403c;Name=lppR;biotype=protein_coding;description=Probable conserved lipoprotein LppR;gene_id=Rv2403c;logic_name=ena +Chromosome ena gene 2700535 2701290 . - . ID=gene:Rv2403c;Name=lppR;biotype=protein_coding;description=Probable conserved lipoprotein LppR;gene_id=Rv2403c;logic_name=ena Chromosome ena mRNA 2700535 2701290 . - . ID=transcript:Rv2403c;Parent=gene:Rv2403c;Name=lppR-1;biotype=protein_coding;transcript_id=Rv2403c Chromosome ena exon 2700535 2701290 . - . Parent=transcript:Rv2403c;Name=Rv2403c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2403c-1;rank=1 Chromosome ena CDS 2700535 2701290 . - 0 ID=CDS:Rv2403c;Parent=transcript:Rv2403c;protein_id=Rv2403c ### -Chromosome ena gene 2701287 2703248 . - . ID=gene:Rv2404c;Name=lepA;biotype=protein_coding;description=Probable GTP-binding protein LepA (GTP-binding elongation factor);gene_id=Rv2404c;logic_name=ena +Chromosome ena gene 2701287 2703248 . - . ID=gene:Rv2404c;Name=lepA;biotype=protein_coding;description=Probable GTP-binding protein LepA (GTP-binding elongation factor);gene_id=Rv2404c;logic_name=ena Chromosome ena mRNA 2701287 2703248 . - . ID=transcript:Rv2404c;Parent=gene:Rv2404c;Name=lepA-1;biotype=protein_coding;transcript_id=Rv2404c Chromosome ena exon 2701287 2703248 . - . Parent=transcript:Rv2404c;Name=Rv2404c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2404c-1;rank=1 Chromosome ena CDS 2701287 2703248 . - 0 ID=CDS:Rv2404c;Parent=transcript:Rv2404c;protein_id=Rv2404c ### -Chromosome ena gene 2703269 2703838 . + . ID=gene:Rv2405;biotype=protein_coding;description=Conserved protein;gene_id=Rv2405;logic_name=ena +Chromosome ena gene 2703269 2703838 . + . ID=gene:Rv2405;biotype=protein_coding;description=Conserved protein;gene_id=Rv2405;logic_name=ena Chromosome ena mRNA 2703269 2703838 . + . ID=transcript:Rv2405;Parent=gene:Rv2405;biotype=protein_coding;transcript_id=Rv2405 Chromosome ena exon 2703269 2703838 . + . Parent=transcript:Rv2405;Name=Rv2405-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2405-1;rank=1 Chromosome ena CDS 2703269 2703838 . + 0 ID=CDS:Rv2405;Parent=transcript:Rv2405;protein_id=Rv2405 ### -Chromosome ena gene 2704009 2704437 . - . ID=gene:Rv2406c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2406c;logic_name=ena +Chromosome ena gene 2704009 2704437 . - . ID=gene:Rv2406c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2406c;logic_name=ena Chromosome ena mRNA 2704009 2704437 . - . ID=transcript:Rv2406c;Parent=gene:Rv2406c;biotype=protein_coding;transcript_id=Rv2406c Chromosome ena exon 2704009 2704437 . - . Parent=transcript:Rv2406c;Name=Rv2406c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2406c-1;rank=1 Chromosome ena CDS 2704009 2704437 . - 0 ID=CDS:Rv2406c;Parent=transcript:Rv2406c;protein_id=Rv2406c ### -Chromosome ena gene 2704697 2705518 . + . ID=gene:Rv2407;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2407;logic_name=ena +Chromosome ena gene 2704697 2705518 . + . ID=gene:Rv2407;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2407;logic_name=ena Chromosome ena mRNA 2704697 2705518 . + . ID=transcript:Rv2407;Parent=gene:Rv2407;biotype=protein_coding;transcript_id=Rv2407 Chromosome ena exon 2704697 2705518 . + . Parent=transcript:Rv2407;Name=Rv2407-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2407-1;rank=1 Chromosome ena CDS 2704697 2705518 . + 0 ID=CDS:Rv2407;Parent=transcript:Rv2407;protein_id=Rv2407 ### -Chromosome ena gene 2706017 2706736 . + . ID=gene:Rv2408;Name=PE24;biotype=protein_coding;description=Possible PE family-related protein PE24;gene_id=Rv2408;logic_name=ena +Chromosome ena gene 2706017 2706736 . + . ID=gene:Rv2408;Name=PE24;biotype=protein_coding;description=Possible PE family-related protein PE24;gene_id=Rv2408;logic_name=ena Chromosome ena mRNA 2706017 2706736 . + . ID=transcript:Rv2408;Parent=gene:Rv2408;Name=PE24-1;biotype=protein_coding;transcript_id=Rv2408 Chromosome ena exon 2706017 2706736 . + . Parent=transcript:Rv2408;Name=Rv2408-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2408-1;rank=1 Chromosome ena CDS 2706017 2706736 . + 0 ID=CDS:Rv2408;Parent=transcript:Rv2408;protein_id=Rv2408 ### -Chromosome ena gene 2706494 2707333 . - . ID=gene:Rv2409c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2409c;logic_name=ena +Chromosome ena gene 2706494 2707333 . - . ID=gene:Rv2409c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2409c;logic_name=ena Chromosome ena mRNA 2706494 2707333 . - . ID=transcript:Rv2409c;Parent=gene:Rv2409c;biotype=protein_coding;transcript_id=Rv2409c Chromosome ena exon 2706494 2707333 . - . Parent=transcript:Rv2409c;Name=Rv2409c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2409c-1;rank=1 Chromosome ena CDS 2706494 2707333 . - 0 ID=CDS:Rv2409c;Parent=transcript:Rv2409c;protein_id=Rv2409c ### -Chromosome ena gene 2707333 2708310 . - . ID=gene:Rv2410c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2410c;logic_name=ena +Chromosome ena gene 2707333 2708310 . - . ID=gene:Rv2410c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2410c;logic_name=ena Chromosome ena mRNA 2707333 2708310 . - . ID=transcript:Rv2410c;Parent=gene:Rv2410c;biotype=protein_coding;transcript_id=Rv2410c Chromosome ena exon 2707333 2708310 . - . Parent=transcript:Rv2410c;Name=Rv2410c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2410c-1;rank=1 Chromosome ena CDS 2707333 2708310 . - 0 ID=CDS:Rv2410c;Parent=transcript:Rv2410c;protein_id=Rv2410c ### -Chromosome ena gene 2708310 2709965 . - . ID=gene:Rv2411c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2411c;logic_name=ena +Chromosome ena gene 2708310 2709965 . - . ID=gene:Rv2411c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2411c;logic_name=ena Chromosome ena mRNA 2708310 2709965 . - . ID=transcript:Rv2411c;Parent=gene:Rv2411c;biotype=protein_coding;transcript_id=Rv2411c Chromosome ena exon 2708310 2709965 . - . Parent=transcript:Rv2411c;Name=Rv2411c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2411c-1;rank=1 Chromosome ena CDS 2708310 2709965 . - 0 ID=CDS:Rv2411c;Parent=transcript:Rv2411c;protein_id=Rv2411c ### -Chromosome ena gene 2710075 2710335 . + . ID=gene:Rv2412;Name=rpsT;biotype=protein_coding;description=30S ribosomal protein S20 RpsT;gene_id=Rv2412;logic_name=ena +Chromosome ena gene 2710075 2710335 . + . ID=gene:Rv2412;Name=rpsT;biotype=protein_coding;description=30S ribosomal protein S20 RpsT;gene_id=Rv2412;logic_name=ena Chromosome ena mRNA 2710075 2710335 . + . ID=transcript:Rv2412;Parent=gene:Rv2412;Name=rpsT-1;biotype=protein_coding;transcript_id=Rv2412 Chromosome ena exon 2710075 2710335 . + . Parent=transcript:Rv2412;Name=Rv2412-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2412-1;rank=1 Chromosome ena CDS 2710075 2710335 . + 0 ID=CDS:Rv2412;Parent=transcript:Rv2412;protein_id=Rv2412 ### -Chromosome ena gene 2710351 2711301 . - . ID=gene:Rv2413c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2413c;logic_name=ena +Chromosome ena gene 2710351 2711301 . - . ID=gene:Rv2413c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2413c;logic_name=ena Chromosome ena mRNA 2710351 2711301 . - . ID=transcript:Rv2413c;Parent=gene:Rv2413c;biotype=protein_coding;transcript_id=Rv2413c Chromosome ena exon 2710351 2711301 . - . Parent=transcript:Rv2413c;Name=Rv2413c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2413c-1;rank=1 Chromosome ena CDS 2710351 2711301 . - 0 ID=CDS:Rv2413c;Parent=transcript:Rv2413c;protein_id=Rv2413c ### -Chromosome ena gene 2711332 2712876 . - . ID=gene:Rv2414c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2414c;logic_name=ena +Chromosome ena gene 2711332 2712876 . - . ID=gene:Rv2414c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2414c;logic_name=ena Chromosome ena mRNA 2711332 2712876 . - . ID=transcript:Rv2414c;Parent=gene:Rv2414c;biotype=protein_coding;transcript_id=Rv2414c Chromosome ena exon 2711332 2712876 . - . Parent=transcript:Rv2414c;Name=Rv2414c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2414c-1;rank=1 Chromosome ena CDS 2711332 2712876 . - 0 ID=CDS:Rv2414c;Parent=transcript:Rv2414c;protein_id=Rv2414c ### -Chromosome ena gene 2712891 2713784 . - . ID=gene:Rv2415c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2415c;logic_name=ena +Chromosome ena gene 2712891 2713784 . - . ID=gene:Rv2415c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2415c;logic_name=ena Chromosome ena mRNA 2712891 2713784 . - . ID=transcript:Rv2415c;Parent=gene:Rv2415c;biotype=protein_coding;transcript_id=Rv2415c Chromosome ena exon 2712891 2713784 . - . Parent=transcript:Rv2415c;Name=Rv2415c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2415c-1;rank=1 Chromosome ena CDS 2712891 2713784 . - 0 ID=CDS:Rv2415c;Parent=transcript:Rv2415c;protein_id=Rv2415c ### -Chromosome ena gene 2714124 2715332 . - . ID=gene:Rv2416c;Name=eis;biotype=protein_coding;description=Enhanced intracellular survival protein Eis%2CGCN5-related N-acetyltransferase;gene_id=Rv2416c;logic_name=ena +Chromosome ena gene 2714124 2715332 . - . ID=gene:Rv2416c;Name=eis;biotype=protein_coding;description=Enhanced intracellular survival protein Eis%2CGCN5-related N-acetyltransferase;gene_id=Rv2416c;logic_name=ena Chromosome ena mRNA 2714124 2715332 . - . ID=transcript:Rv2416c;Parent=gene:Rv2416c;Name=eis-1;biotype=protein_coding;transcript_id=Rv2416c Chromosome ena exon 2714124 2715332 . - . Parent=transcript:Rv2416c;Name=Rv2416c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2416c-1;rank=1 Chromosome ena CDS 2714124 2715332 . - 0 ID=CDS:Rv2416c;Parent=transcript:Rv2416c;protein_id=Rv2416c ### -Chromosome ena gene 2715472 2716314 . - . ID=gene:Rv2417c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2417c;logic_name=ena +Chromosome ena gene 2715472 2716314 . - . ID=gene:Rv2417c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2417c;logic_name=ena Chromosome ena mRNA 2715472 2716314 . - . ID=transcript:Rv2417c;Parent=gene:Rv2417c;biotype=protein_coding;transcript_id=Rv2417c Chromosome ena exon 2715472 2716314 . - . Parent=transcript:Rv2417c;Name=Rv2417c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2417c-1;rank=1 Chromosome ena CDS 2715472 2716314 . - 0 ID=CDS:Rv2417c;Parent=transcript:Rv2417c;protein_id=Rv2417c ### -Chromosome ena gene 2716395 2717138 . - . ID=gene:Rv2418c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2418c;logic_name=ena +Chromosome ena gene 2716395 2717138 . - . ID=gene:Rv2418c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2418c;logic_name=ena Chromosome ena mRNA 2716395 2717138 . - . ID=transcript:Rv2418c;Parent=gene:Rv2418c;biotype=protein_coding;transcript_id=Rv2418c Chromosome ena exon 2716395 2717138 . - . Parent=transcript:Rv2418c;Name=Rv2418c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2418c-1;rank=1 Chromosome ena CDS 2716395 2717138 . - 0 ID=CDS:Rv2418c;Parent=transcript:Rv2418c;protein_id=Rv2418c ### -Chromosome ena gene 2717128 2717799 . - . ID=gene:Rv2419c;Name=gpgP;biotype=protein_coding;description=Glucosyl-3-phosphoglycerate phosphatase GpgP;gene_id=Rv2419c;logic_name=ena +Chromosome ena gene 2717128 2717799 . - . ID=gene:Rv2419c;Name=gpgP;biotype=protein_coding;description=Glucosyl-3-phosphoglycerate phosphatase GpgP;gene_id=Rv2419c;logic_name=ena Chromosome ena mRNA 2717128 2717799 . - . ID=transcript:Rv2419c;Parent=gene:Rv2419c;Name=gpgP-1;biotype=protein_coding;transcript_id=Rv2419c Chromosome ena exon 2717128 2717799 . - . Parent=transcript:Rv2419c;Name=Rv2419c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2419c-1;rank=1 Chromosome ena CDS 2717128 2717799 . - 0 ID=CDS:Rv2419c;Parent=transcript:Rv2419c;protein_id=Rv2419c ### -Chromosome ena gene 2717796 2718176 . - . ID=gene:Rv2420c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2420c;logic_name=ena +Chromosome ena gene 2717796 2718176 . - . ID=gene:Rv2420c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2420c;logic_name=ena Chromosome ena mRNA 2717796 2718176 . - . ID=transcript:Rv2420c;Parent=gene:Rv2420c;biotype=protein_coding;transcript_id=Rv2420c Chromosome ena exon 2717796 2718176 . - . Parent=transcript:Rv2420c;Name=Rv2420c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2420c-1;rank=1 Chromosome ena CDS 2717796 2718176 . - 0 ID=CDS:Rv2420c;Parent=transcript:Rv2420c;protein_id=Rv2420c ### -Chromosome ena gene 2718173 2718808 . - . ID=gene:Rv2421c;Name=nadD;biotype=protein_coding;description=Probable nicotinate-nucleotide adenylyltransferase NadD (deamido-NAD(+) pyrophosphorylase) (deamido-NAD(+) diphosphorylase) (nicotinate mononucleotide adenylyltransferase) (NAMN adenylyltransferase);gene_id=Rv2421c;logic_name=ena +Chromosome ena gene 2718173 2718808 . - . ID=gene:Rv2421c;Name=nadD;biotype=protein_coding;description=Probable nicotinate-nucleotide adenylyltransferase NadD (deamido-NAD(+) pyrophosphorylase) (deamido-NAD(+) diphosphorylase) (nicotinate mononucleotide adenylyltransferase) (NAMN adenylyltransferase);gene_id=Rv2421c;logic_name=ena Chromosome ena mRNA 2718173 2718808 . - . ID=transcript:Rv2421c;Parent=gene:Rv2421c;Name=nadD-1;biotype=protein_coding;transcript_id=Rv2421c Chromosome ena exon 2718173 2718808 . - . Parent=transcript:Rv2421c;Name=Rv2421c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2421c-1;rank=1 Chromosome ena CDS 2718173 2718808 . - 0 ID=CDS:Rv2421c;Parent=transcript:Rv2421c;protein_id=Rv2421c ### -Chromosome ena gene 2719083 2719355 . + . ID=gene:Rv2422;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2422;logic_name=ena +Chromosome ena gene 2719083 2719355 . + . ID=gene:Rv2422;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2422;logic_name=ena Chromosome ena mRNA 2719083 2719355 . + . ID=transcript:Rv2422;Parent=gene:Rv2422;biotype=protein_coding;transcript_id=Rv2422 Chromosome ena exon 2719083 2719355 . + . Parent=transcript:Rv2422;Name=Rv2422-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2422-1;rank=1 Chromosome ena CDS 2719083 2719355 . + 0 ID=CDS:Rv2422;Parent=transcript:Rv2422;protein_id=Rv2422 ### -Chromosome ena gene 2719597 2720643 . + . ID=gene:Rv2423;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2423;logic_name=ena +Chromosome ena gene 2719597 2720643 . + . ID=gene:Rv2423;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2423;logic_name=ena Chromosome ena mRNA 2719597 2720643 . + . ID=transcript:Rv2423;Parent=gene:Rv2423;biotype=protein_coding;transcript_id=Rv2423 Chromosome ena exon 2719597 2720643 . + . Parent=transcript:Rv2423;Name=Rv2423-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2423-1;rank=1 Chromosome ena CDS 2719597 2720643 . + 0 ID=CDS:Rv2423;Parent=transcript:Rv2423;protein_id=Rv2423 ### -Chromosome ena gene 2720776 2721777 . - . ID=gene:Rv2424c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2424c;logic_name=ena +Chromosome ena gene 2720776 2721777 . - . ID=gene:Rv2424c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2424c;logic_name=ena Chromosome ena mRNA 2720776 2721777 . - . ID=transcript:Rv2424c;Parent=gene:Rv2424c;biotype=protein_coding;transcript_id=Rv2424c Chromosome ena exon 2720776 2721777 . - . Parent=transcript:Rv2424c;Name=Rv2424c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2424c-1;rank=1 Chromosome ena CDS 2720776 2721777 . - 0 ID=CDS:Rv2424c;Parent=transcript:Rv2424c;protein_id=Rv2424c ### -Chromosome ena_mobile_element biological_region 2720779 2721777 . - . external_name=Rv2424c%3B IS1558-2%2C len: 999 nt. Insertion sequence IS1558.;logic_name=ena_mobile_element -Chromosome ena gene 2721866 2723308 . - . ID=gene:Rv2425c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2425c;logic_name=ena +Chromosome ena_mobile_element biological_region 2720779 2721777 . - . external_name=Rv2424c%3B IS1558-2%2C len: 999 nt. Insertion sequence IS1558.;logic_name=ena_mobile_element +Chromosome ena gene 2721866 2723308 . - . ID=gene:Rv2425c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2425c;logic_name=ena Chromosome ena mRNA 2721866 2723308 . - . ID=transcript:Rv2425c;Parent=gene:Rv2425c;biotype=protein_coding;transcript_id=Rv2425c Chromosome ena exon 2721866 2723308 . - . Parent=transcript:Rv2425c;Name=Rv2425c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2425c-1;rank=1 Chromosome ena CDS 2721866 2723308 . - 0 ID=CDS:Rv2425c;Parent=transcript:Rv2425c;protein_id=Rv2425c ### -Chromosome ena gene 2723308 2724183 . - . ID=gene:Rv2426c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2426c;logic_name=ena +Chromosome ena gene 2723308 2724183 . - . ID=gene:Rv2426c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2426c;logic_name=ena Chromosome ena mRNA 2723308 2724183 . - . ID=transcript:Rv2426c;Parent=gene:Rv2426c;biotype=protein_coding;transcript_id=Rv2426c Chromosome ena exon 2723308 2724183 . - . Parent=transcript:Rv2426c;Name=Rv2426c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2426c-1;rank=1 Chromosome ena CDS 2723308 2724183 . - 0 ID=CDS:Rv2426c;Parent=transcript:Rv2426c;protein_id=Rv2426c ### -Chromosome ena gene 2724230 2725477 . - . ID=gene:Rv2427c;Name=proA;biotype=protein_coding;description=Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase);gene_id=Rv2427c;logic_name=ena +Chromosome ena gene 2724230 2725477 . - . ID=gene:Rv2427c;Name=proA;biotype=protein_coding;description=Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase);gene_id=Rv2427c;logic_name=ena Chromosome ena mRNA 2724230 2725477 . - . ID=transcript:Rv2427c;Parent=gene:Rv2427c;Name=proA-1;biotype=protein_coding;transcript_id=Rv2427c Chromosome ena exon 2724230 2725477 . - . Parent=transcript:Rv2427c;Name=Rv2427c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2427c-1;rank=1 Chromosome ena CDS 2724230 2725477 . - 0 ID=CDS:Rv2427c;Parent=transcript:Rv2427c;protein_id=Rv2427c ### -Chromosome ena pseudogene 2725571 2726087 . - . ID=gene:Rv2427A;Name=oxyR';biotype=pseudogene;description=Transcriptional regulator OxyR'%2C pseudogene;gene_id=Rv2427A;logic_name=ena +Chromosome ena pseudogene 2725571 2726087 . - . ID=gene:Rv2427A;Name=oxyR';biotype=pseudogene;description=Transcriptional regulator OxyR'%2C pseudogene;gene_id=Rv2427A;logic_name=ena Chromosome ena pseudogene 2725571 2726087 . - . ID=transcript:Rv2427A;Parent=gene:Rv2427A;Name=oxyR'-1;biotype=pseudogene;transcript_id=Rv2427A Chromosome ena exon 2725571 2726087 . - . Parent=transcript:Rv2427A;Name=Rv2427A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2427A-1;rank=1 ### -Chromosome ena gene 2726193 2726780 . + . ID=gene:Rv2428;Name=ahpC;biotype=protein_coding;description=Alkyl hydroperoxide reductase C protein AhpC (alkyl hydroperoxidase C);gene_id=Rv2428;logic_name=ena +Chromosome ena gene 2726193 2726780 . + . ID=gene:Rv2428;Name=ahpC;biotype=protein_coding;description=Alkyl hydroperoxide reductase C protein AhpC (alkyl hydroperoxidase C);gene_id=Rv2428;logic_name=ena Chromosome ena mRNA 2726193 2726780 . + . ID=transcript:Rv2428;Parent=gene:Rv2428;Name=ahpC-1;biotype=protein_coding;transcript_id=Rv2428 Chromosome ena exon 2726193 2726780 . + . Parent=transcript:Rv2428;Name=Rv2428-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2428-1;rank=1 Chromosome ena CDS 2726193 2726780 . + 0 ID=CDS:Rv2428;Parent=transcript:Rv2428;protein_id=Rv2428 ### -Chromosome ena gene 2726806 2727339 . + . ID=gene:Rv2429;Name=ahpD;biotype=protein_coding;description=Alkyl hydroperoxide reductase D protein AhpD (alkyl hydroperoxidase D);gene_id=Rv2429;logic_name=ena +Chromosome ena gene 2726806 2727339 . + . ID=gene:Rv2429;Name=ahpD;biotype=protein_coding;description=Alkyl hydroperoxide reductase D protein AhpD (alkyl hydroperoxidase D);gene_id=Rv2429;logic_name=ena Chromosome ena mRNA 2726806 2727339 . + . ID=transcript:Rv2429;Parent=gene:Rv2429;Name=ahpD-1;biotype=protein_coding;transcript_id=Rv2429 Chromosome ena exon 2726806 2727339 . + . Parent=transcript:Rv2429;Name=Rv2429-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2429-1;rank=1 Chromosome ena CDS 2726806 2727339 . + 0 ID=CDS:Rv2429;Parent=transcript:Rv2429;protein_id=Rv2429 ### -Chromosome ena gene 2727336 2727920 . - . ID=gene:Rv2430c;Name=PPE41;biotype=protein_coding;description=PPE family protein PPE41;gene_id=Rv2430c;logic_name=ena +Chromosome ena gene 2727336 2727920 . - . ID=gene:Rv2430c;Name=PPE41;biotype=protein_coding;description=PPE family protein PPE41;gene_id=Rv2430c;logic_name=ena Chromosome ena mRNA 2727336 2727920 . - . ID=transcript:Rv2430c;Parent=gene:Rv2430c;Name=PPE41-1;biotype=protein_coding;transcript_id=Rv2430c Chromosome ena exon 2727336 2727920 . - . Parent=transcript:Rv2430c;Name=Rv2430c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2430c-1;rank=1 Chromosome ena CDS 2727336 2727920 . - 0 ID=CDS:Rv2430c;Parent=transcript:Rv2430c;protein_id=Rv2430c ### -Chromosome ena gene 2727967 2728266 . - . ID=gene:Rv2431c;Name=PE25;biotype=protein_coding;description=PE family protein PE25;gene_id=Rv2431c;logic_name=ena +Chromosome ena gene 2727967 2728266 . - . ID=gene:Rv2431c;Name=PE25;biotype=protein_coding;description=PE family protein PE25;gene_id=Rv2431c;logic_name=ena Chromosome ena mRNA 2727967 2728266 . - . ID=transcript:Rv2431c;Parent=gene:Rv2431c;Name=PE25-1;biotype=protein_coding;transcript_id=Rv2431c Chromosome ena exon 2727967 2728266 . - . Parent=transcript:Rv2431c;Name=Rv2431c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2431c-1;rank=1 Chromosome ena CDS 2727967 2728266 . - 0 ID=CDS:Rv2431c;Parent=transcript:Rv2431c;protein_id=Rv2431c ### -Chromosome ena gene 2728437 2728847 . - . ID=gene:Rv2432c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2432c;logic_name=ena +Chromosome ena gene 2728437 2728847 . - . ID=gene:Rv2432c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2432c;logic_name=ena Chromosome ena mRNA 2728437 2728847 . - . ID=transcript:Rv2432c;Parent=gene:Rv2432c;biotype=protein_coding;transcript_id=Rv2432c Chromosome ena exon 2728437 2728847 . - . Parent=transcript:Rv2432c;Name=Rv2432c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2432c-1;rank=1 Chromosome ena CDS 2728437 2728847 . - 0 ID=CDS:Rv2432c;Parent=transcript:Rv2432c;protein_id=Rv2432c ### -Chromosome ena gene 2728844 2729134 . - . ID=gene:Rv2433c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2433c;logic_name=ena +Chromosome ena gene 2728844 2729134 . - . ID=gene:Rv2433c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2433c;logic_name=ena Chromosome ena mRNA 2728844 2729134 . - . ID=transcript:Rv2433c;Parent=gene:Rv2433c;biotype=protein_coding;transcript_id=Rv2433c Chromosome ena exon 2728844 2729134 . - . Parent=transcript:Rv2433c;Name=Rv2433c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2433c-1;rank=1 Chromosome ena CDS 2728844 2729134 . - 0 ID=CDS:Rv2433c;Parent=transcript:Rv2433c;protein_id=Rv2433c ### -Chromosome ena gene 2729115 2730560 . - . ID=gene:Rv2434c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2434c;logic_name=ena +Chromosome ena gene 2729115 2730560 . - . ID=gene:Rv2434c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2434c;logic_name=ena Chromosome ena mRNA 2729115 2730560 . - . ID=transcript:Rv2434c;Parent=gene:Rv2434c;biotype=protein_coding;transcript_id=Rv2434c Chromosome ena exon 2729115 2730560 . - . Parent=transcript:Rv2434c;Name=Rv2434c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2434c-1;rank=1 Chromosome ena CDS 2729115 2730560 . - 0 ID=CDS:Rv2434c;Parent=transcript:Rv2434c;protein_id=Rv2434c ### -Chromosome ena gene 2730557 2732749 . - . ID=gene:Rv2435c;biotype=protein_coding;description=Probable cyclase (adenylyl-or guanylyl-)(adenylate-or guanylate-);gene_id=Rv2435c;logic_name=ena +Chromosome ena gene 2730557 2732749 . - . ID=gene:Rv2435c;biotype=protein_coding;description=Probable cyclase (adenylyl-or guanylyl-)(adenylate-or guanylate-);gene_id=Rv2435c;logic_name=ena Chromosome ena mRNA 2730557 2732749 . - . ID=transcript:Rv2435c;Parent=gene:Rv2435c;biotype=protein_coding;transcript_id=Rv2435c Chromosome ena exon 2730557 2732749 . - . Parent=transcript:Rv2435c;Name=Rv2435c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2435c-1;rank=1 Chromosome ena CDS 2730557 2732749 . - 0 ID=CDS:Rv2435c;Parent=transcript:Rv2435c;protein_id=Rv2435c ### -Chromosome ena gene 2733230 2734144 . + . ID=gene:Rv2436;Name=rbsK;biotype=protein_coding;description=Ribokinase RbsK;gene_id=Rv2436;logic_name=ena +Chromosome ena gene 2733230 2734144 . + . ID=gene:Rv2436;Name=rbsK;biotype=protein_coding;description=Ribokinase RbsK;gene_id=Rv2436;logic_name=ena Chromosome ena mRNA 2733230 2734144 . + . ID=transcript:Rv2436;Parent=gene:Rv2436;Name=rbsK-1;biotype=protein_coding;transcript_id=Rv2436 Chromosome ena exon 2733230 2734144 . + . Parent=transcript:Rv2436;Name=Rv2436-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2436-1;rank=1 Chromosome ena CDS 2733230 2734144 . + 0 ID=CDS:Rv2436;Parent=transcript:Rv2436;protein_id=Rv2436 ### -Chromosome ena gene 2734376 2734795 . + . ID=gene:Rv2437;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2437;logic_name=ena +Chromosome ena gene 2734376 2734795 . + . ID=gene:Rv2437;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv2437;logic_name=ena Chromosome ena mRNA 2734376 2734795 . + . ID=transcript:Rv2437;Parent=gene:Rv2437;biotype=protein_coding;transcript_id=Rv2437 Chromosome ena exon 2734376 2734795 . + . Parent=transcript:Rv2437;Name=Rv2437-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2437-1;rank=1 Chromosome ena CDS 2734376 2734795 . + 0 ID=CDS:Rv2437;Parent=transcript:Rv2437;protein_id=Rv2437 ### -Chromosome ena gene 2734792 2736831 . - . ID=gene:Rv2438c;Name=nadE;biotype=protein_coding;description=Glutamine-dependent NAD(+) synthetase NadE (NAD(+) synthase [glutamine-hydrolysing]);gene_id=Rv2438c;logic_name=ena +Chromosome ena gene 2734792 2736831 . - . ID=gene:Rv2438c;Name=nadE;biotype=protein_coding;description=Glutamine-dependent NAD(+) synthetase NadE (NAD(+) synthase [glutamine-hydrolysing]);gene_id=Rv2438c;logic_name=ena Chromosome ena mRNA 2734792 2736831 . - . ID=transcript:Rv2438c;Parent=gene:Rv2438c;Name=nadE-1;biotype=protein_coding;transcript_id=Rv2438c Chromosome ena exon 2734792 2736831 . - . Parent=transcript:Rv2438c;Name=Rv2438c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2438c-1;rank=1 Chromosome ena CDS 2734792 2736831 . - 0 ID=CDS:Rv2438c;Parent=transcript:Rv2438c;protein_id=Rv2438c ### -Chromosome ena gene 2736709 2736987 . + . ID=gene:Rv2438A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2438A;logic_name=ena +Chromosome ena gene 2736709 2736987 . + . ID=gene:Rv2438A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2438A;logic_name=ena Chromosome ena mRNA 2736709 2736987 . + . ID=transcript:Rv2438A;Parent=gene:Rv2438A;biotype=protein_coding;transcript_id=Rv2438A Chromosome ena exon 2736709 2736987 . + . Parent=transcript:Rv2438A;Name=Rv2438A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2438A-1;rank=1 Chromosome ena CDS 2736709 2736987 . + 0 ID=CDS:Rv2438A;Parent=transcript:Rv2438A;protein_id=Rv2438A ### -Chromosome ena gene 2737117 2738247 . - . ID=gene:Rv2439c;Name=proB;biotype=protein_coding;description=Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK);gene_id=Rv2439c;logic_name=ena +Chromosome ena gene 2737117 2738247 . - . ID=gene:Rv2439c;Name=proB;biotype=protein_coding;description=Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK);gene_id=Rv2439c;logic_name=ena Chromosome ena mRNA 2737117 2738247 . - . ID=transcript:Rv2439c;Parent=gene:Rv2439c;Name=proB-1;biotype=protein_coding;transcript_id=Rv2439c Chromosome ena exon 2737117 2738247 . - . Parent=transcript:Rv2439c;Name=Rv2439c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2439c-1;rank=1 Chromosome ena CDS 2737117 2738247 . - 0 ID=CDS:Rv2439c;Parent=transcript:Rv2439c;protein_id=Rv2439c ### -Chromosome ena gene 2738247 2739686 . - . ID=gene:Rv2440c;Name=obg;biotype=protein_coding;description=Probable GTP1/Obg-family GTP-binding protein Obg;gene_id=Rv2440c;logic_name=ena +Chromosome ena gene 2738247 2739686 . - . ID=gene:Rv2440c;Name=obg;biotype=protein_coding;description=Probable GTP1/Obg-family GTP-binding protein Obg;gene_id=Rv2440c;logic_name=ena Chromosome ena mRNA 2738247 2739686 . - . ID=transcript:Rv2440c;Parent=gene:Rv2440c;Name=obg-1;biotype=protein_coding;transcript_id=Rv2440c Chromosome ena exon 2738247 2739686 . - . Parent=transcript:Rv2440c;Name=Rv2440c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2440c-1;rank=1 Chromosome ena CDS 2738247 2739686 . - 0 ID=CDS:Rv2440c;Parent=transcript:Rv2440c;protein_id=Rv2440c ### -Chromosome ena gene 2739772 2740032 . - . ID=gene:Rv2441c;Name=rpmA;biotype=protein_coding;description=50S ribosomal protein L27 RpmA;gene_id=Rv2441c;logic_name=ena +Chromosome ena gene 2739772 2740032 . - . ID=gene:Rv2441c;Name=rpmA;biotype=protein_coding;description=50S ribosomal protein L27 RpmA;gene_id=Rv2441c;logic_name=ena Chromosome ena mRNA 2739772 2740032 . - . ID=transcript:Rv2441c;Parent=gene:Rv2441c;Name=rpmA-1;biotype=protein_coding;transcript_id=Rv2441c Chromosome ena exon 2739772 2740032 . - . Parent=transcript:Rv2441c;Name=Rv2441c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2441c-1;rank=1 Chromosome ena CDS 2739772 2740032 . - 0 ID=CDS:Rv2441c;Parent=transcript:Rv2441c;protein_id=Rv2441c ### -Chromosome ena gene 2740047 2740361 . - . ID=gene:Rv2442c;Name=rplU;biotype=protein_coding;description=50S ribosomal protein L21 RplU;gene_id=Rv2442c;logic_name=ena +Chromosome ena gene 2740047 2740361 . - . ID=gene:Rv2442c;Name=rplU;biotype=protein_coding;description=50S ribosomal protein L21 RplU;gene_id=Rv2442c;logic_name=ena Chromosome ena mRNA 2740047 2740361 . - . ID=transcript:Rv2442c;Parent=gene:Rv2442c;Name=rplU-1;biotype=protein_coding;transcript_id=Rv2442c Chromosome ena exon 2740047 2740361 . - . Parent=transcript:Rv2442c;Name=Rv2442c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2442c-1;rank=1 Chromosome ena CDS 2740047 2740361 . - 0 ID=CDS:Rv2442c;Parent=transcript:Rv2442c;protein_id=Rv2442c ### -Chromosome ena gene 2740709 2742184 . + . ID=gene:Rv2443;Name=dctA;biotype=protein_coding;description=Probable C4-dicarboxylate-transport transmembrane protein DctA;gene_id=Rv2443;logic_name=ena +Chromosome ena gene 2740709 2742184 . + . ID=gene:Rv2443;Name=dctA;biotype=protein_coding;description=Probable C4-dicarboxylate-transport transmembrane protein DctA;gene_id=Rv2443;logic_name=ena Chromosome ena mRNA 2740709 2742184 . + . ID=transcript:Rv2443;Parent=gene:Rv2443;Name=dctA-1;biotype=protein_coding;transcript_id=Rv2443 Chromosome ena exon 2740709 2742184 . + . Parent=transcript:Rv2443;Name=Rv2443-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2443-1;rank=1 Chromosome ena CDS 2740709 2742184 . + 0 ID=CDS:Rv2443;Parent=transcript:Rv2443;protein_id=Rv2443 ### -Chromosome ena gene 2742123 2744984 . - . ID=gene:Rv2444c;Name=rne;biotype=protein_coding;description=Possible ribonuclease E Rne;gene_id=Rv2444c;logic_name=ena +Chromosome ena gene 2742123 2744984 . - . ID=gene:Rv2444c;Name=rne;biotype=protein_coding;description=Possible ribonuclease E Rne;gene_id=Rv2444c;logic_name=ena Chromosome ena mRNA 2742123 2744984 . - . ID=transcript:Rv2444c;Parent=gene:Rv2444c;Name=rne-1;biotype=protein_coding;transcript_id=Rv2444c Chromosome ena exon 2742123 2744984 . - . Parent=transcript:Rv2444c;Name=Rv2444c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2444c-1;rank=1 Chromosome ena CDS 2742123 2744984 . - 0 ID=CDS:Rv2444c;Parent=transcript:Rv2444c;protein_id=Rv2444c ### -Chromosome ena gene 2745314 2745724 . - . ID=gene:Rv2445c;Name=ndkA;biotype=protein_coding;description=Probable nucleoside diphosphate kinase NdkA (NDK) (NDP kinase) (nucleoside-2-P kinase);gene_id=Rv2445c;logic_name=ena +Chromosome ena gene 2745314 2745724 . - . ID=gene:Rv2445c;Name=ndkA;biotype=protein_coding;description=Probable nucleoside diphosphate kinase NdkA (NDK) (NDP kinase) (nucleoside-2-P kinase);gene_id=Rv2445c;logic_name=ena Chromosome ena mRNA 2745314 2745724 . - . ID=transcript:Rv2445c;Parent=gene:Rv2445c;Name=ndkA-1;biotype=protein_coding;transcript_id=Rv2445c Chromosome ena exon 2745314 2745724 . - . Parent=transcript:Rv2445c;Name=Rv2445c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2445c-1;rank=1 Chromosome ena CDS 2745314 2745724 . - 0 ID=CDS:Rv2445c;Parent=transcript:Rv2445c;protein_id=Rv2445c ### -Chromosome ena gene 2745767 2746138 . - . ID=gene:Rv2446c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2446c;logic_name=ena +Chromosome ena gene 2745767 2746138 . - . ID=gene:Rv2446c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2446c;logic_name=ena Chromosome ena mRNA 2745767 2746138 . - . ID=transcript:Rv2446c;Parent=gene:Rv2446c;biotype=protein_coding;transcript_id=Rv2446c Chromosome ena exon 2745767 2746138 . - . Parent=transcript:Rv2446c;Name=Rv2446c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2446c-1;rank=1 Chromosome ena CDS 2745767 2746138 . - 0 ID=CDS:Rv2446c;Parent=transcript:Rv2446c;protein_id=Rv2446c ### -Chromosome ena gene 2746135 2747598 . - . ID=gene:Rv2447c;Name=folC;biotype=protein_coding;description=Probable folylpolyglutamate synthase protein FolC (folylpoly-gamma-glutamate synthetase) (FPGS);gene_id=Rv2447c;logic_name=ena +Chromosome ena gene 2746135 2747598 . - . ID=gene:Rv2447c;Name=folC;biotype=protein_coding;description=Probable folylpolyglutamate synthase protein FolC (folylpoly-gamma-glutamate synthetase) (FPGS);gene_id=Rv2447c;logic_name=ena Chromosome ena mRNA 2746135 2747598 . - . ID=transcript:Rv2447c;Parent=gene:Rv2447c;Name=folC-1;biotype=protein_coding;transcript_id=Rv2447c Chromosome ena exon 2746135 2747598 . - . Parent=transcript:Rv2447c;Name=Rv2447c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2447c-1;rank=1 Chromosome ena CDS 2746135 2747598 . - 0 ID=CDS:Rv2447c;Parent=transcript:Rv2447c;protein_id=Rv2447c ### -Chromosome ena gene 2747595 2750225 . - . ID=gene:Rv2448c;Name=valS;biotype=protein_coding;description=Probable valyl-tRNA synthase protein ValS (valyl-tRNA synthetase) (valine--tRNA ligase) (valine translase);gene_id=Rv2448c;logic_name=ena +Chromosome ena gene 2747595 2750225 . - . ID=gene:Rv2448c;Name=valS;biotype=protein_coding;description=Probable valyl-tRNA synthase protein ValS (valyl-tRNA synthetase) (valine--tRNA ligase) (valine translase);gene_id=Rv2448c;logic_name=ena Chromosome ena mRNA 2747595 2750225 . - . ID=transcript:Rv2448c;Parent=gene:Rv2448c;Name=valS-1;biotype=protein_coding;transcript_id=Rv2448c Chromosome ena exon 2747595 2750225 . - . Parent=transcript:Rv2448c;Name=Rv2448c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2448c-1;rank=1 Chromosome ena CDS 2747595 2750225 . - 0 ID=CDS:Rv2448c;Parent=transcript:Rv2448c;protein_id=Rv2448c ### -Chromosome ena gene 2750313 2751572 . - . ID=gene:Rv2449c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2449c;logic_name=ena +Chromosome ena gene 2750313 2751572 . - . ID=gene:Rv2449c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2449c;logic_name=ena Chromosome ena mRNA 2750313 2751572 . - . ID=transcript:Rv2449c;Parent=gene:Rv2449c;biotype=protein_coding;transcript_id=Rv2449c Chromosome ena exon 2750313 2751572 . - . Parent=transcript:Rv2449c;Name=Rv2449c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2449c-1;rank=1 Chromosome ena CDS 2750313 2751572 . - 0 ID=CDS:Rv2449c;Parent=transcript:Rv2449c;protein_id=Rv2449c ### -Chromosome ena gene 2751662 2752180 . - . ID=gene:Rv2450c;Name=rpfE;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfE;gene_id=Rv2450c;logic_name=ena +Chromosome ena gene 2751662 2752180 . - . ID=gene:Rv2450c;Name=rpfE;biotype=protein_coding;description=Probable resuscitation-promoting factor RpfE;gene_id=Rv2450c;logic_name=ena Chromosome ena mRNA 2751662 2752180 . - . ID=transcript:Rv2450c;Parent=gene:Rv2450c;Name=rpfE-1;biotype=protein_coding;transcript_id=Rv2450c Chromosome ena exon 2751662 2752180 . - . Parent=transcript:Rv2450c;Name=Rv2450c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2450c-1;rank=1 Chromosome ena CDS 2751662 2752180 . - 0 ID=CDS:Rv2450c;Parent=transcript:Rv2450c;protein_id=Rv2450c ### -Chromosome ena gene 2752262 2752660 . + . ID=gene:Rv2451;biotype=protein_coding;description=Hypothetical proline and serine rich protein;gene_id=Rv2451;logic_name=ena +Chromosome ena gene 2752262 2752660 . + . ID=gene:Rv2451;biotype=protein_coding;description=Hypothetical proline and serine rich protein;gene_id=Rv2451;logic_name=ena Chromosome ena mRNA 2752262 2752660 . + . ID=transcript:Rv2451;Parent=gene:Rv2451;biotype=protein_coding;transcript_id=Rv2451 Chromosome ena exon 2752262 2752660 . + . Parent=transcript:Rv2451;Name=Rv2451-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2451-1;rank=1 Chromosome ena CDS 2752262 2752660 . + 0 ID=CDS:Rv2451;Parent=transcript:Rv2451;protein_id=Rv2451 ### -Chromosome ena gene 2752848 2752994 . - . ID=gene:Rv2452c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2452c;logic_name=ena +Chromosome ena gene 2752848 2752994 . - . ID=gene:Rv2452c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2452c;logic_name=ena Chromosome ena mRNA 2752848 2752994 . - . ID=transcript:Rv2452c;Parent=gene:Rv2452c;biotype=protein_coding;transcript_id=Rv2452c Chromosome ena exon 2752848 2752994 . - . Parent=transcript:Rv2452c;Name=Rv2452c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2452c-1;rank=1 Chromosome ena CDS 2752848 2752994 . - 0 ID=CDS:Rv2452c;Parent=transcript:Rv2452c;protein_id=Rv2452c ### -Chromosome ena gene 2753018 2753623 . - . ID=gene:Rv2453c;Name=mobA;biotype=protein_coding;description=Probable molybdopterin-guanine dinucleotide biosynthesis protein A MobA;gene_id=Rv2453c;logic_name=ena +Chromosome ena gene 2753018 2753623 . - . ID=gene:Rv2453c;Name=mobA;biotype=protein_coding;description=Probable molybdopterin-guanine dinucleotide biosynthesis protein A MobA;gene_id=Rv2453c;logic_name=ena Chromosome ena mRNA 2753018 2753623 . - . ID=transcript:Rv2453c;Parent=gene:Rv2453c;Name=mobA-1;biotype=protein_coding;transcript_id=Rv2453c Chromosome ena exon 2753018 2753623 . - . Parent=transcript:Rv2453c;Name=Rv2453c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2453c-1;rank=1 Chromosome ena CDS 2753018 2753623 . - 0 ID=CDS:Rv2453c;Parent=transcript:Rv2453c;protein_id=Rv2453c ### -Chromosome ena gene 2753625 2754746 . - . ID=gene:Rv2454c;biotype=protein_coding;description=Probable oxidoreductase (beta subunit);gene_id=Rv2454c;logic_name=ena +Chromosome ena gene 2753625 2754746 . - . ID=gene:Rv2454c;biotype=protein_coding;description=Probable oxidoreductase (beta subunit);gene_id=Rv2454c;logic_name=ena Chromosome ena mRNA 2753625 2754746 . - . ID=transcript:Rv2454c;Parent=gene:Rv2454c;biotype=protein_coding;transcript_id=Rv2454c Chromosome ena exon 2753625 2754746 . - . Parent=transcript:Rv2454c;Name=Rv2454c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2454c-1;rank=1 Chromosome ena CDS 2753625 2754746 . - 0 ID=CDS:Rv2454c;Parent=transcript:Rv2454c;protein_id=Rv2454c ### -Chromosome ena gene 2754743 2756704 . - . ID=gene:Rv2455c;biotype=protein_coding;description=Probable oxidoreductase (alpha subunit);gene_id=Rv2455c;logic_name=ena +Chromosome ena gene 2754743 2756704 . - . ID=gene:Rv2455c;biotype=protein_coding;description=Probable oxidoreductase (alpha subunit);gene_id=Rv2455c;logic_name=ena Chromosome ena mRNA 2754743 2756704 . - . ID=transcript:Rv2455c;Parent=gene:Rv2455c;biotype=protein_coding;transcript_id=Rv2455c Chromosome ena exon 2754743 2756704 . - . Parent=transcript:Rv2455c;Name=Rv2455c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2455c-1;rank=1 Chromosome ena CDS 2754743 2756704 . - 0 ID=CDS:Rv2455c;Parent=transcript:Rv2455c;protein_id=Rv2455c ### -Chromosome ena gene 2756936 2758192 . - . ID=gene:Rv2456c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv2456c;logic_name=ena +Chromosome ena gene 2756936 2758192 . - . ID=gene:Rv2456c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv2456c;logic_name=ena Chromosome ena mRNA 2756936 2758192 . - . ID=transcript:Rv2456c;Parent=gene:Rv2456c;biotype=protein_coding;transcript_id=Rv2456c Chromosome ena exon 2756936 2758192 . - . Parent=transcript:Rv2456c;Name=Rv2456c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2456c-1;rank=1 Chromosome ena CDS 2756936 2758192 . - 0 ID=CDS:Rv2456c;Parent=transcript:Rv2456c;protein_id=Rv2456c ### -Chromosome ena gene 2758208 2759488 . - . ID=gene:Rv2457c;Name=clpX;biotype=protein_coding;description=Probable ATP-dependent CLP protease ATP-binding subunit ClpX;gene_id=Rv2457c;logic_name=ena +Chromosome ena gene 2758208 2759488 . - . ID=gene:Rv2457c;Name=clpX;biotype=protein_coding;description=Probable ATP-dependent CLP protease ATP-binding subunit ClpX;gene_id=Rv2457c;logic_name=ena Chromosome ena mRNA 2758208 2759488 . - . ID=transcript:Rv2457c;Parent=gene:Rv2457c;Name=clpX-1;biotype=protein_coding;transcript_id=Rv2457c Chromosome ena exon 2758208 2759488 . - . Parent=transcript:Rv2457c;Name=Rv2457c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2457c-1;rank=1 Chromosome ena CDS 2758208 2759488 . - 0 ID=CDS:Rv2457c;Parent=transcript:Rv2457c;protein_id=Rv2457c ### -Chromosome ena gene 2759779 2760687 . + . ID=gene:Rv2458;Name=mmuM;biotype=protein_coding;description=Probable homocysteine S-methyltransferase MmuM (S-methylmethionine:homocysteine methyltransferase) (cysteine methyltransferase);gene_id=Rv2458;logic_name=ena +Chromosome ena gene 2759779 2760687 . + . ID=gene:Rv2458;Name=mmuM;biotype=protein_coding;description=Probable homocysteine S-methyltransferase MmuM (S-methylmethionine:homocysteine methyltransferase) (cysteine methyltransferase);gene_id=Rv2458;logic_name=ena Chromosome ena mRNA 2759779 2760687 . + . ID=transcript:Rv2458;Parent=gene:Rv2458;Name=mmuM-1;biotype=protein_coding;transcript_id=Rv2458 Chromosome ena exon 2759779 2760687 . + . Parent=transcript:Rv2458;Name=Rv2458-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2458-1;rank=1 Chromosome ena CDS 2759779 2760687 . + 0 ID=CDS:Rv2458;Parent=transcript:Rv2458;protein_id=Rv2458 ### -Chromosome ena gene 2760854 2762380 . + . ID=gene:Rv2459;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv2459;logic_name=ena +Chromosome ena gene 2760854 2762380 . + . ID=gene:Rv2459;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv2459;logic_name=ena Chromosome ena mRNA 2760854 2762380 . + . ID=transcript:Rv2459;Parent=gene:Rv2459;biotype=protein_coding;transcript_id=Rv2459 Chromosome ena exon 2760854 2762380 . + . Parent=transcript:Rv2459;Name=Rv2459-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2459-1;rank=1 Chromosome ena CDS 2760854 2762380 . + 0 ID=CDS:Rv2459;Parent=transcript:Rv2459;protein_id=Rv2459 ### -Chromosome ena gene 2762531 2763175 . - . ID=gene:Rv2460c;Name=clpP2;biotype=protein_coding;description=Probable ATP-dependent CLP protease proteolytic subunit 2 ClpP2 (endopeptidase CLP 2);gene_id=Rv2460c;logic_name=ena +Chromosome ena gene 2762531 2763175 . - . ID=gene:Rv2460c;Name=clpP2;biotype=protein_coding;description=Probable ATP-dependent CLP protease proteolytic subunit 2 ClpP2 (endopeptidase CLP 2);gene_id=Rv2460c;logic_name=ena Chromosome ena mRNA 2762531 2763175 . - . ID=transcript:Rv2460c;Parent=gene:Rv2460c;Name=clpP2-1;biotype=protein_coding;transcript_id=Rv2460c Chromosome ena exon 2762531 2763175 . - . Parent=transcript:Rv2460c;Name=Rv2460c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2460c-1;rank=1 Chromosome ena CDS 2762531 2763175 . - 0 ID=CDS:Rv2460c;Parent=transcript:Rv2460c;protein_id=Rv2460c ### -Chromosome ena gene 2763172 2763774 . - . ID=gene:Rv2461c;Name=clpP1;biotype=protein_coding;description=Probable ATP-dependent CLP protease proteolytic subunit 1 ClpP1 (endopeptidase CLP);gene_id=Rv2461c;logic_name=ena +Chromosome ena gene 2763172 2763774 . - . ID=gene:Rv2461c;Name=clpP1;biotype=protein_coding;description=Probable ATP-dependent CLP protease proteolytic subunit 1 ClpP1 (endopeptidase CLP);gene_id=Rv2461c;logic_name=ena Chromosome ena mRNA 2763172 2763774 . - . ID=transcript:Rv2461c;Parent=gene:Rv2461c;Name=clpP1-1;biotype=protein_coding;transcript_id=Rv2461c Chromosome ena exon 2763172 2763774 . - . Parent=transcript:Rv2461c;Name=Rv2461c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2461c-1;rank=1 Chromosome ena CDS 2763172 2763774 . - 0 ID=CDS:Rv2461c;Parent=transcript:Rv2461c;protein_id=Rv2461c ### -Chromosome ena gene 2763891 2765291 . - . ID=gene:Rv2462c;Name=tig;biotype=protein_coding;description=Probable trigger factor (TF) protein Tig;gene_id=Rv2462c;logic_name=ena +Chromosome ena gene 2763891 2765291 . - . ID=gene:Rv2462c;Name=tig;biotype=protein_coding;description=Probable trigger factor (TF) protein Tig;gene_id=Rv2462c;logic_name=ena Chromosome ena mRNA 2763891 2765291 . - . ID=transcript:Rv2462c;Parent=gene:Rv2462c;Name=tig-1;biotype=protein_coding;transcript_id=Rv2462c Chromosome ena exon 2763891 2765291 . - . Parent=transcript:Rv2462c;Name=Rv2462c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2462c-1;rank=1 Chromosome ena CDS 2763891 2765291 . - 0 ID=CDS:Rv2462c;Parent=transcript:Rv2462c;protein_id=Rv2462c @@ -12947,123 +12947,123 @@ Chromosome ena transcript 2765541 2765611 . + . ID=transcript:EBG00000313361;Par Chromosome ena exon 2765541 2765611 . + . Parent=transcript:EBG00000313361;Name=EBG00000313361;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313361;rank=1 ### Chromosome ena_gene biological_region 2765541 2765611 . + . external_name=AL123456.3:gene:2765541..2765611;logic_name=ena_gene -Chromosome ena gene 2765655 2766839 . + . ID=gene:Rv2463;Name=lipP;biotype=protein_coding;description=Probable esterase/lipase LipP;gene_id=Rv2463;logic_name=ena +Chromosome ena gene 2765655 2766839 . + . ID=gene:Rv2463;Name=lipP;biotype=protein_coding;description=Probable esterase/lipase LipP;gene_id=Rv2463;logic_name=ena Chromosome ena mRNA 2765655 2766839 . + . ID=transcript:Rv2463;Parent=gene:Rv2463;Name=lipP-1;biotype=protein_coding;transcript_id=Rv2463 Chromosome ena exon 2765655 2766839 . + . Parent=transcript:Rv2463;Name=Rv2463-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2463-1;rank=1 Chromosome ena CDS 2765655 2766839 . + 0 ID=CDS:Rv2463;Parent=transcript:Rv2463;protein_id=Rv2463 ### -Chromosome ena gene 2766859 2767665 . - . ID=gene:Rv2464c;biotype=protein_coding;description=Possible DNA glycosylase;gene_id=Rv2464c;logic_name=ena +Chromosome ena gene 2766859 2767665 . - . ID=gene:Rv2464c;biotype=protein_coding;description=Possible DNA glycosylase;gene_id=Rv2464c;logic_name=ena Chromosome ena mRNA 2766859 2767665 . - . ID=transcript:Rv2464c;Parent=gene:Rv2464c;biotype=protein_coding;transcript_id=Rv2464c Chromosome ena exon 2766859 2767665 . - . Parent=transcript:Rv2464c;Name=Rv2464c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2464c-1;rank=1 Chromosome ena CDS 2766859 2767665 . - 0 ID=CDS:Rv2464c;Parent=transcript:Rv2464c;protein_id=Rv2464c ### -Chromosome ena gene 2767671 2768159 . - . ID=gene:Rv2465c;Name=rpiB;biotype=protein_coding;description=Ribose-5-phosphate isomerase;gene_id=Rv2465c;logic_name=ena +Chromosome ena gene 2767671 2768159 . - . ID=gene:Rv2465c;Name=rpiB;biotype=protein_coding;description=Ribose-5-phosphate isomerase;gene_id=Rv2465c;logic_name=ena Chromosome ena mRNA 2767671 2768159 . - . ID=transcript:Rv2465c;Parent=gene:Rv2465c;Name=rpiB-1;biotype=protein_coding;transcript_id=Rv2465c Chromosome ena exon 2767671 2768159 . - . Parent=transcript:Rv2465c;Name=Rv2465c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2465c-1;rank=1 Chromosome ena CDS 2767671 2768159 . - 0 ID=CDS:Rv2465c;Parent=transcript:Rv2465c;protein_id=Rv2465c ### -Chromosome ena gene 2768261 2768884 . - . ID=gene:Rv2466c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2466c;logic_name=ena +Chromosome ena gene 2768261 2768884 . - . ID=gene:Rv2466c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2466c;logic_name=ena Chromosome ena mRNA 2768261 2768884 . - . ID=transcript:Rv2466c;Parent=gene:Rv2466c;biotype=protein_coding;transcript_id=Rv2466c Chromosome ena exon 2768261 2768884 . - . Parent=transcript:Rv2466c;Name=Rv2466c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2466c-1;rank=1 Chromosome ena CDS 2768261 2768884 . - 0 ID=CDS:Rv2466c;Parent=transcript:Rv2466c;protein_id=Rv2466c ### -Chromosome ena gene 2768986 2771571 . + . ID=gene:Rv2467;Name=pepN;biotype=protein_coding;description=Probable aminopeptidase N PepN (Lysyl aminopeptidase) (LYS-AP) (alanine aminopeptidase);gene_id=Rv2467;logic_name=ena +Chromosome ena gene 2768986 2771571 . + . ID=gene:Rv2467;Name=pepN;biotype=protein_coding;description=Probable aminopeptidase N PepN (Lysyl aminopeptidase) (LYS-AP) (alanine aminopeptidase);gene_id=Rv2467;logic_name=ena Chromosome ena mRNA 2768986 2771571 . + . ID=transcript:Rv2467;Parent=gene:Rv2467;Name=pepN-1;biotype=protein_coding;transcript_id=Rv2467 Chromosome ena exon 2768986 2771571 . + . Parent=transcript:Rv2467;Name=Rv2467-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2467-1;rank=1 Chromosome ena CDS 2768986 2771571 . + 0 ID=CDS:Rv2467;Parent=transcript:Rv2467;protein_id=Rv2467 ### -Chromosome ena gene 2771644 2772147 . - . ID=gene:Rv2468c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2468c;logic_name=ena +Chromosome ena gene 2771644 2772147 . - . ID=gene:Rv2468c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2468c;logic_name=ena Chromosome ena mRNA 2771644 2772147 . - . ID=transcript:Rv2468c;Parent=gene:Rv2468c;biotype=protein_coding;transcript_id=Rv2468c Chromosome ena exon 2771644 2772147 . - . Parent=transcript:Rv2468c;Name=Rv2468c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2468c-1;rank=1 Chromosome ena CDS 2771644 2772147 . - 0 ID=CDS:Rv2468c;Parent=transcript:Rv2468c;protein_id=Rv2468c ### -Chromosome ena gene 2772098 2772331 . - . ID=gene:Rv2468A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2468A;logic_name=ena +Chromosome ena gene 2772098 2772331 . - . ID=gene:Rv2468A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2468A;logic_name=ena Chromosome ena mRNA 2772098 2772331 . - . ID=transcript:Rv2468A;Parent=gene:Rv2468A;biotype=protein_coding;transcript_id=Rv2468A Chromosome ena exon 2772098 2772331 . - . Parent=transcript:Rv2468A;Name=Rv2468A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2468A-1;rank=1 Chromosome ena CDS 2772098 2772331 . - 0 ID=CDS:Rv2468A;Parent=transcript:Rv2468A;protein_id=Rv2468A ### -Chromosome ena gene 2772367 2773035 . - . ID=gene:Rv2469c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2469c;logic_name=ena +Chromosome ena gene 2772367 2773035 . - . ID=gene:Rv2469c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2469c;logic_name=ena Chromosome ena mRNA 2772367 2773035 . - . ID=transcript:Rv2469c;Parent=gene:Rv2469c;biotype=protein_coding;transcript_id=Rv2469c Chromosome ena exon 2772367 2773035 . - . Parent=transcript:Rv2469c;Name=Rv2469c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2469c-1;rank=1 Chromosome ena CDS 2772367 2773035 . - 0 ID=CDS:Rv2469c;Parent=transcript:Rv2469c;protein_id=Rv2469c ### -Chromosome ena gene 2773178 2773564 . + . ID=gene:Rv2470;Name=glbO;biotype=protein_coding;description=Globin (oxygen-binding protein) GlbO;gene_id=Rv2470;logic_name=ena +Chromosome ena gene 2773178 2773564 . + . ID=gene:Rv2470;Name=glbO;biotype=protein_coding;description=Globin (oxygen-binding protein) GlbO;gene_id=Rv2470;logic_name=ena Chromosome ena mRNA 2773178 2773564 . + . ID=transcript:Rv2470;Parent=gene:Rv2470;Name=glbO-1;biotype=protein_coding;transcript_id=Rv2470 Chromosome ena exon 2773178 2773564 . + . Parent=transcript:Rv2470;Name=Rv2470-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2470-1;rank=1 Chromosome ena CDS 2773178 2773564 . + 0 ID=CDS:Rv2470;Parent=transcript:Rv2470;protein_id=Rv2470 ### -Chromosome ena gene 2773564 2775204 . + . ID=gene:Rv2471;Name=aglA;biotype=protein_coding;description=Probable alpha-glucosidase AglA (maltase) (glucoinvertase) (glucosidosucrase) (maltase-glucoamylase) (lysosomal alpha-glucosidase) (acid maltase);gene_id=Rv2471;logic_name=ena +Chromosome ena gene 2773564 2775204 . + . ID=gene:Rv2471;Name=aglA;biotype=protein_coding;description=Probable alpha-glucosidase AglA (maltase) (glucoinvertase) (glucosidosucrase) (maltase-glucoamylase) (lysosomal alpha-glucosidase) (acid maltase);gene_id=Rv2471;logic_name=ena Chromosome ena mRNA 2773564 2775204 . + . ID=transcript:Rv2471;Parent=gene:Rv2471;Name=aglA-1;biotype=protein_coding;transcript_id=Rv2471 Chromosome ena exon 2773564 2775204 . + . Parent=transcript:Rv2471;Name=Rv2471-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2471-1;rank=1 Chromosome ena CDS 2773564 2775204 . + 0 ID=CDS:Rv2471;Parent=transcript:Rv2471;protein_id=Rv2471 ### -Chromosome ena gene 2775272 2775565 . + . ID=gene:Rv2472;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2472;logic_name=ena +Chromosome ena gene 2775272 2775565 . + . ID=gene:Rv2472;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2472;logic_name=ena Chromosome ena mRNA 2775272 2775565 . + . ID=transcript:Rv2472;Parent=gene:Rv2472;biotype=protein_coding;transcript_id=Rv2472 Chromosome ena exon 2775272 2775565 . + . Parent=transcript:Rv2472;Name=Rv2472-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2472-1;rank=1 Chromosome ena CDS 2775272 2775565 . + 0 ID=CDS:Rv2472;Parent=transcript:Rv2472;protein_id=Rv2472 ### -Chromosome ena gene 2775568 2776284 . + . ID=gene:Rv2473;biotype=protein_coding;description=Possible alanine and proline rich membrane protein;gene_id=Rv2473;logic_name=ena +Chromosome ena gene 2775568 2776284 . + . ID=gene:Rv2473;biotype=protein_coding;description=Possible alanine and proline rich membrane protein;gene_id=Rv2473;logic_name=ena Chromosome ena mRNA 2775568 2776284 . + . ID=transcript:Rv2473;Parent=gene:Rv2473;biotype=protein_coding;transcript_id=Rv2473 Chromosome ena exon 2775568 2776284 . + . Parent=transcript:Rv2473;Name=Rv2473-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2473-1;rank=1 Chromosome ena CDS 2775568 2776284 . + 0 ID=CDS:Rv2473;Parent=transcript:Rv2473;protein_id=Rv2473 ### -Chromosome ena gene 2776316 2776969 . - . ID=gene:Rv2474c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2474c;logic_name=ena +Chromosome ena gene 2776316 2776969 . - . ID=gene:Rv2474c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2474c;logic_name=ena Chromosome ena mRNA 2776316 2776969 . - . ID=transcript:Rv2474c;Parent=gene:Rv2474c;biotype=protein_coding;transcript_id=Rv2474c Chromosome ena exon 2776316 2776969 . - . Parent=transcript:Rv2474c;Name=Rv2474c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2474c-1;rank=1 Chromosome ena CDS 2776316 2776969 . - 0 ID=CDS:Rv2474c;Parent=transcript:Rv2474c;protein_id=Rv2474c ### -Chromosome ena gene 2776975 2777391 . - . ID=gene:Rv2475c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2475c;logic_name=ena +Chromosome ena gene 2776975 2777391 . - . ID=gene:Rv2475c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2475c;logic_name=ena Chromosome ena mRNA 2776975 2777391 . - . ID=transcript:Rv2475c;Parent=gene:Rv2475c;biotype=protein_coding;transcript_id=Rv2475c Chromosome ena exon 2776975 2777391 . - . Parent=transcript:Rv2475c;Name=Rv2475c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2475c-1;rank=1 Chromosome ena CDS 2776975 2777391 . - 0 ID=CDS:Rv2475c;Parent=transcript:Rv2475c;protein_id=Rv2475c ### -Chromosome ena gene 2777388 2782262 . - . ID=gene:Rv2476c;Name=gdh;biotype=protein_coding;description=Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase);gene_id=Rv2476c;logic_name=ena +Chromosome ena gene 2777388 2782262 . - . ID=gene:Rv2476c;Name=gdh;biotype=protein_coding;description=Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase);gene_id=Rv2476c;logic_name=ena Chromosome ena mRNA 2777388 2782262 . - . ID=transcript:Rv2476c;Parent=gene:Rv2476c;Name=gdh-1;biotype=protein_coding;transcript_id=Rv2476c Chromosome ena exon 2777388 2782262 . - . Parent=transcript:Rv2476c;Name=Rv2476c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2476c-1;rank=1 Chromosome ena CDS 2777388 2782262 . - 0 ID=CDS:Rv2476c;Parent=transcript:Rv2476c;protein_id=Rv2476c ### -Chromosome ena gene 2782366 2784042 . - . ID=gene:Rv2477c;biotype=protein_coding;description=Probable macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv2477c;logic_name=ena +Chromosome ena gene 2782366 2784042 . - . ID=gene:Rv2477c;biotype=protein_coding;description=Probable macrolide-transport ATP-binding protein ABC transporter;gene_id=Rv2477c;logic_name=ena Chromosome ena mRNA 2782366 2784042 . - . ID=transcript:Rv2477c;Parent=gene:Rv2477c;biotype=protein_coding;transcript_id=Rv2477c Chromosome ena exon 2782366 2784042 . - . Parent=transcript:Rv2477c;Name=Rv2477c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2477c-1;rank=1 Chromosome ena CDS 2782366 2784042 . - 0 ID=CDS:Rv2477c;Parent=transcript:Rv2477c;protein_id=Rv2477c ### -Chromosome ena gene 2784123 2784608 . - . ID=gene:Rv2478c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2478c;logic_name=ena +Chromosome ena gene 2784123 2784608 . - . ID=gene:Rv2478c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2478c;logic_name=ena Chromosome ena mRNA 2784123 2784608 . - . ID=transcript:Rv2478c;Parent=gene:Rv2478c;biotype=protein_coding;transcript_id=Rv2478c Chromosome ena exon 2784123 2784608 . - . Parent=transcript:Rv2478c;Name=Rv2478c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2478c-1;rank=1 Chromosome ena CDS 2784123 2784608 . - 0 ID=CDS:Rv2478c;Parent=transcript:Rv2478c;protein_id=Rv2478c ### -Chromosome ena_mobile_element biological_region 2784614 2785970 . - . external_name=IS6110-9%2C len: 1357 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 2784657 2785643 . - . ID=gene:Rv2479c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2479c;logic_name=ena +Chromosome ena_mobile_element biological_region 2784614 2785970 . - . external_name=IS6110-9%2C len: 1357 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 2784657 2785643 . - . ID=gene:Rv2479c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2479c;logic_name=ena Chromosome ena mRNA 2784657 2785643 . - . ID=transcript:Rv2479c;Parent=gene:Rv2479c;biotype=protein_coding;transcript_id=Rv2479c Chromosome ena exon 2784657 2785643 . - . Parent=transcript:Rv2479c;Name=Rv2479c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2479c-1;rank=1 Chromosome ena CDS 2784657 2785643 . - 0 ID=CDS:Rv2479c;Parent=transcript:Rv2479c;protein_id=Rv2479c ### -Chromosome ena gene 2785592 2785918 . - . ID=gene:Rv2480c;biotype=protein_coding;description=Possible transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2480c;logic_name=ena +Chromosome ena gene 2785592 2785918 . - . ID=gene:Rv2480c;biotype=protein_coding;description=Possible transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2480c;logic_name=ena Chromosome ena mRNA 2785592 2785918 . - . ID=transcript:Rv2480c;Parent=gene:Rv2480c;biotype=protein_coding;transcript_id=Rv2480c Chromosome ena exon 2785592 2785918 . - . Parent=transcript:Rv2480c;Name=Rv2480c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2480c-1;rank=1 Chromosome ena CDS 2785592 2785918 . - 0 ID=CDS:Rv2480c;Parent=transcript:Rv2480c;protein_id=Rv2480c ### -Chromosome ena gene 2786575 2786898 . - . ID=gene:Rv2481c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2481c;logic_name=ena +Chromosome ena gene 2786575 2786898 . - . ID=gene:Rv2481c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2481c;logic_name=ena Chromosome ena mRNA 2786575 2786898 . - . ID=transcript:Rv2481c;Parent=gene:Rv2481c;biotype=protein_coding;transcript_id=Rv2481c Chromosome ena exon 2786575 2786898 . - . Parent=transcript:Rv2481c;Name=Rv2481c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2481c-1;rank=1 Chromosome ena CDS 2786575 2786898 . - 0 ID=CDS:Rv2481c;Parent=transcript:Rv2481c;protein_id=Rv2481c ### -Chromosome ena gene 2786914 2789283 . - . ID=gene:Rv2482c;Name=plsB2;biotype=protein_coding;description=Probable glycerol-3-phosphate acyltransferase PlsB2 (GPAT);gene_id=Rv2482c;logic_name=ena +Chromosome ena gene 2786914 2789283 . - . ID=gene:Rv2482c;Name=plsB2;biotype=protein_coding;description=Probable glycerol-3-phosphate acyltransferase PlsB2 (GPAT);gene_id=Rv2482c;logic_name=ena Chromosome ena mRNA 2786914 2789283 . - . ID=transcript:Rv2482c;Parent=gene:Rv2482c;Name=plsB2-1;biotype=protein_coding;transcript_id=Rv2482c Chromosome ena exon 2786914 2789283 . - . Parent=transcript:Rv2482c;Name=Rv2482c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2482c-1;rank=1 Chromosome ena CDS 2786914 2789283 . - 0 ID=CDS:Rv2482c;Parent=transcript:Rv2482c;protein_id=Rv2482c ### -Chromosome ena gene 2789280 2791022 . - . ID=gene:Rv2483c;Name=plsC;biotype=protein_coding;description=Possible transmembrane phospholipid biosynthesis bifunctional enzyme PlsC: putative L-3-phosphoserine phosphatase (O-phosphoserine phosphohydrolase) (PSP) (pspase) + 1-acyl-SN-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (lysophosphatidic acid acyltransferase) (LPAAT);gene_id=Rv2483c;logic_name=ena +Chromosome ena gene 2789280 2791022 . - . ID=gene:Rv2483c;Name=plsC;biotype=protein_coding;description=Possible transmembrane phospholipid biosynthesis bifunctional enzyme PlsC: putative L-3-phosphoserine phosphatase (O-phosphoserine phosphohydrolase) (PSP) (pspase) + 1-acyl-SN-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (lysophosphatidic acid acyltransferase) (LPAAT);gene_id=Rv2483c;logic_name=ena Chromosome ena mRNA 2789280 2791022 . - . ID=transcript:Rv2483c;Parent=gene:Rv2483c;Name=plsC-1;biotype=protein_coding;transcript_id=Rv2483c Chromosome ena exon 2789280 2791022 . - . Parent=transcript:Rv2483c;Name=Rv2483c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2483c-1;rank=1 Chromosome ena CDS 2789280 2791022 . - 0 ID=CDS:Rv2483c;Parent=transcript:Rv2483c;protein_id=Rv2483c ### -Chromosome ena gene 2791019 2792494 . - . ID=gene:Rv2484c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv2484c;logic_name=ena +Chromosome ena gene 2791019 2792494 . - . ID=gene:Rv2484c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv2484c;logic_name=ena Chromosome ena mRNA 2791019 2792494 . - . ID=transcript:Rv2484c;Parent=gene:Rv2484c;biotype=protein_coding;transcript_id=Rv2484c Chromosome ena exon 2791019 2792494 . - . Parent=transcript:Rv2484c;Name=Rv2484c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2484c-1;rank=1 Chromosome ena CDS 2791019 2792494 . - 0 ID=CDS:Rv2484c;Parent=transcript:Rv2484c;protein_id=Rv2484c ### -Chromosome ena gene 2792723 2793988 . - . ID=gene:Rv2485c;Name=lipQ;biotype=protein_coding;description=Probable carboxylesterase LipQ;gene_id=Rv2485c;logic_name=ena +Chromosome ena gene 2792723 2793988 . - . ID=gene:Rv2485c;Name=lipQ;biotype=protein_coding;description=Probable carboxylesterase LipQ;gene_id=Rv2485c;logic_name=ena Chromosome ena mRNA 2792723 2793988 . - . ID=transcript:Rv2485c;Parent=gene:Rv2485c;Name=lipQ-1;biotype=protein_coding;transcript_id=Rv2485c Chromosome ena exon 2792723 2793988 . - . Parent=transcript:Rv2485c;Name=Rv2485c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2485c-1;rank=1 Chromosome ena CDS 2792723 2793988 . - 0 ID=CDS:Rv2485c;Parent=transcript:Rv2485c;protein_id=Rv2485c @@ -13073,132 +13073,132 @@ Chromosome ena transcript 2794176 2794249 . + . ID=transcript:EBG00000313342;Par Chromosome ena exon 2794176 2794249 . + . Parent=transcript:EBG00000313342;Name=EBG00000313342;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313342;rank=1 ### Chromosome ena_gene biological_region 2794176 2794249 . + . external_name=AL123456.3:gene:2794176..2794249;logic_name=ena_gene -Chromosome ena gene 2794350 2795120 . + . ID=gene:Rv2486;Name=echA14;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA14 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2486;logic_name=ena +Chromosome ena gene 2794350 2795120 . + . ID=gene:Rv2486;Name=echA14;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA14 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2486;logic_name=ena Chromosome ena mRNA 2794350 2795120 . + . ID=transcript:Rv2486;Parent=gene:Rv2486;Name=echA14-1;biotype=protein_coding;transcript_id=Rv2486 Chromosome ena exon 2794350 2795120 . + . Parent=transcript:Rv2486;Name=Rv2486-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2486-1;rank=1 Chromosome ena CDS 2794350 2795120 . + 0 ID=CDS:Rv2486;Parent=transcript:Rv2486;protein_id=Rv2486 ### -Chromosome ena gene 2795301 2797385 . - . ID=gene:Rv2487c;Name=PE_PGRS42;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS42;gene_id=Rv2487c;logic_name=ena +Chromosome ena gene 2795301 2797385 . - . ID=gene:Rv2487c;Name=PE_PGRS42;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS42;gene_id=Rv2487c;logic_name=ena Chromosome ena mRNA 2795301 2797385 . - . ID=transcript:Rv2487c;Parent=gene:Rv2487c;Name=PE_PGRS42-1;biotype=protein_coding;transcript_id=Rv2487c Chromosome ena exon 2795301 2797385 . - . Parent=transcript:Rv2487c;Name=Rv2487c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2487c-1;rank=1 Chromosome ena CDS 2795301 2797385 . - 0 ID=CDS:Rv2487c;Parent=transcript:Rv2487c;protein_id=Rv2487c ### -Chromosome ena gene 2797467 2800880 . - . ID=gene:Rv2488c;biotype=protein_coding;description=Probable transcriptional regulatory protein (LuxR-family);gene_id=Rv2488c;logic_name=ena +Chromosome ena gene 2797467 2800880 . - . ID=gene:Rv2488c;biotype=protein_coding;description=Probable transcriptional regulatory protein (LuxR-family);gene_id=Rv2488c;logic_name=ena Chromosome ena mRNA 2797467 2800880 . - . ID=transcript:Rv2488c;Parent=gene:Rv2488c;biotype=protein_coding;transcript_id=Rv2488c Chromosome ena exon 2797467 2800880 . - . Parent=transcript:Rv2488c;Name=Rv2488c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2488c-1;rank=1 Chromosome ena CDS 2797467 2800880 . - 0 ID=CDS:Rv2488c;Parent=transcript:Rv2488c;protein_id=Rv2488c ### -Chromosome ena gene 2800846 2801145 . - . ID=gene:Rv2489c;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv2489c;logic_name=ena +Chromosome ena gene 2800846 2801145 . - . ID=gene:Rv2489c;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv2489c;logic_name=ena Chromosome ena mRNA 2800846 2801145 . - . ID=transcript:Rv2489c;Parent=gene:Rv2489c;biotype=protein_coding;transcript_id=Rv2489c Chromosome ena exon 2800846 2801145 . - . Parent=transcript:Rv2489c;Name=Rv2489c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2489c-1;rank=1 Chromosome ena CDS 2800846 2801145 . - 0 ID=CDS:Rv2489c;Parent=transcript:Rv2489c;protein_id=Rv2489c ### -Chromosome ena gene 2801254 2806236 . - . ID=gene:Rv2490c;Name=PE_PGRS43;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS43;gene_id=Rv2490c;logic_name=ena +Chromosome ena gene 2801254 2806236 . - . ID=gene:Rv2490c;Name=PE_PGRS43;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS43;gene_id=Rv2490c;logic_name=ena Chromosome ena mRNA 2801254 2806236 . - . ID=transcript:Rv2490c;Parent=gene:Rv2490c;Name=PE_PGRS43-1;biotype=protein_coding;transcript_id=Rv2490c Chromosome ena exon 2801254 2806236 . - . Parent=transcript:Rv2490c;Name=Rv2490c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2490c-1;rank=1 Chromosome ena CDS 2801254 2806236 . - 0 ID=CDS:Rv2490c;Parent=transcript:Rv2490c;protein_id=Rv2490c ### -Chromosome ena gene 2806665 2807288 . + . ID=gene:Rv2491;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2491;logic_name=ena +Chromosome ena gene 2806665 2807288 . + . ID=gene:Rv2491;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2491;logic_name=ena Chromosome ena mRNA 2806665 2807288 . + . ID=transcript:Rv2491;Parent=gene:Rv2491;biotype=protein_coding;transcript_id=Rv2491 Chromosome ena exon 2806665 2807288 . + . Parent=transcript:Rv2491;Name=Rv2491-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2491-1;rank=1 Chromosome ena CDS 2806665 2807288 . + 0 ID=CDS:Rv2491;Parent=transcript:Rv2491;protein_id=Rv2491 ### -Chromosome ena gene 2807278 2808030 . + . ID=gene:Rv2492;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2492;logic_name=ena +Chromosome ena gene 2807278 2808030 . + . ID=gene:Rv2492;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2492;logic_name=ena Chromosome ena mRNA 2807278 2808030 . + . ID=transcript:Rv2492;Parent=gene:Rv2492;biotype=protein_coding;transcript_id=Rv2492 Chromosome ena exon 2807278 2808030 . + . Parent=transcript:Rv2492;Name=Rv2492-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2492-1;rank=1 Chromosome ena CDS 2807278 2808030 . + 0 ID=CDS:Rv2492;Parent=transcript:Rv2492;protein_id=Rv2492 ### -Chromosome ena gene 2808083 2808304 . + . ID=gene:Rv2493;Name=vapB38;biotype=protein_coding;description=Possible antitoxin VapB38;gene_id=Rv2493;logic_name=ena +Chromosome ena gene 2808083 2808304 . + . ID=gene:Rv2493;Name=vapB38;biotype=protein_coding;description=Possible antitoxin VapB38;gene_id=Rv2493;logic_name=ena Chromosome ena mRNA 2808083 2808304 . + . ID=transcript:Rv2493;Parent=gene:Rv2493;Name=vapB38-1;biotype=protein_coding;transcript_id=Rv2493 Chromosome ena exon 2808083 2808304 . + . Parent=transcript:Rv2493;Name=Rv2493-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2493-1;rank=1 Chromosome ena CDS 2808083 2808304 . + 0 ID=CDS:Rv2493;Parent=transcript:Rv2493;protein_id=Rv2493 ### -Chromosome ena gene 2808310 2808735 . + . ID=gene:Rv2494;Name=vapC38;biotype=protein_coding;description=Possible toxin VapC38. Contains PIN domain.;gene_id=Rv2494;logic_name=ena +Chromosome ena gene 2808310 2808735 . + . ID=gene:Rv2494;Name=vapC38;biotype=protein_coding;description=Possible toxin VapC38. Contains PIN domain.;gene_id=Rv2494;logic_name=ena Chromosome ena mRNA 2808310 2808735 . + . ID=transcript:Rv2494;Parent=gene:Rv2494;Name=vapC38-1;biotype=protein_coding;transcript_id=Rv2494 Chromosome ena exon 2808310 2808735 . + . Parent=transcript:Rv2494;Name=Rv2494-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2494-1;rank=1 Chromosome ena CDS 2808310 2808735 . + 0 ID=CDS:Rv2494;Parent=transcript:Rv2494;protein_id=Rv2494 ### -Chromosome ena gene 2808758 2809939 . - . ID=gene:Rv2495c;Name=bkdC;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E2 component BkdC;gene_id=Rv2495c;logic_name=ena +Chromosome ena gene 2808758 2809939 . - . ID=gene:Rv2495c;Name=bkdC;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E2 component BkdC;gene_id=Rv2495c;logic_name=ena Chromosome ena mRNA 2808758 2809939 . - . ID=transcript:Rv2495c;Parent=gene:Rv2495c;Name=bkdC-1;biotype=protein_coding;transcript_id=Rv2495c Chromosome ena exon 2808758 2809939 . - . Parent=transcript:Rv2495c;Name=Rv2495c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2495c-1;rank=1 Chromosome ena CDS 2808758 2809939 . - 0 ID=CDS:Rv2495c;Parent=transcript:Rv2495c;protein_id=Rv2495c ### -Chromosome ena gene 2809936 2810982 . - . ID=gene:Rv2496c;Name=bkdB;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E1 component%2C beta subunit BkdB;gene_id=Rv2496c;logic_name=ena +Chromosome ena gene 2809936 2810982 . - . ID=gene:Rv2496c;Name=bkdB;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E1 component%2C beta subunit BkdB;gene_id=Rv2496c;logic_name=ena Chromosome ena mRNA 2809936 2810982 . - . ID=transcript:Rv2496c;Parent=gene:Rv2496c;Name=bkdB-1;biotype=protein_coding;transcript_id=Rv2496c Chromosome ena exon 2809936 2810982 . - . Parent=transcript:Rv2496c;Name=Rv2496c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2496c-1;rank=1 Chromosome ena CDS 2809936 2810982 . - 0 ID=CDS:Rv2496c;Parent=transcript:Rv2496c;protein_id=Rv2496c ### -Chromosome ena gene 2810993 2812096 . - . ID=gene:Rv2497c;Name=bkdA;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E1 component%2C alpha subunit BkdA;gene_id=Rv2497c;logic_name=ena +Chromosome ena gene 2810993 2812096 . - . ID=gene:Rv2497c;Name=bkdA;biotype=protein_coding;description=Probable branched-chain keto acid dehydrogenase E1 component%2C alpha subunit BkdA;gene_id=Rv2497c;logic_name=ena Chromosome ena mRNA 2810993 2812096 . - . ID=transcript:Rv2497c;Parent=gene:Rv2497c;Name=bkdA-1;biotype=protein_coding;transcript_id=Rv2497c Chromosome ena exon 2810993 2812096 . - . Parent=transcript:Rv2497c;Name=Rv2497c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2497c-1;rank=1 Chromosome ena CDS 2810993 2812096 . - 0 ID=CDS:Rv2497c;Parent=transcript:Rv2497c;protein_id=Rv2497c ### -Chromosome ena gene 2812355 2813176 . - . ID=gene:Rv2498c;Name=citE;biotype=protein_coding;description=Probable citrate (pro-3S)-lyase (beta subunit) CitE (citrase) (citratase) (citritase) (citridesmolase) (citrase aldolase);gene_id=Rv2498c;logic_name=ena +Chromosome ena gene 2812355 2813176 . - . ID=gene:Rv2498c;Name=citE;biotype=protein_coding;description=Probable citrate (pro-3S)-lyase (beta subunit) CitE (citrase) (citratase) (citritase) (citridesmolase) (citrase aldolase);gene_id=Rv2498c;logic_name=ena Chromosome ena mRNA 2812355 2813176 . - . ID=transcript:Rv2498c;Parent=gene:Rv2498c;Name=citE-1;biotype=protein_coding;transcript_id=Rv2498c Chromosome ena exon 2812355 2813176 . - . Parent=transcript:Rv2498c;Name=Rv2498c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2498c-1;rank=1 Chromosome ena CDS 2812355 2813176 . - 0 ID=CDS:Rv2498c;Parent=transcript:Rv2498c;protein_id=Rv2498c ### -Chromosome ena gene 2813173 2813730 . - . ID=gene:Rv2499c;biotype=protein_coding;description=Possible oxidase regulatory-related protein;gene_id=Rv2499c;logic_name=ena +Chromosome ena gene 2813173 2813730 . - . ID=gene:Rv2499c;biotype=protein_coding;description=Possible oxidase regulatory-related protein;gene_id=Rv2499c;logic_name=ena Chromosome ena mRNA 2813173 2813730 . - . ID=transcript:Rv2499c;Parent=gene:Rv2499c;biotype=protein_coding;transcript_id=Rv2499c Chromosome ena exon 2813173 2813730 . - . Parent=transcript:Rv2499c;Name=Rv2499c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2499c-1;rank=1 Chromosome ena CDS 2813173 2813730 . - 0 ID=CDS:Rv2499c;Parent=transcript:Rv2499c;protein_id=Rv2499c ### -Chromosome ena gene 2813727 2814911 . - . ID=gene:Rv2500c;Name=fadE19;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE19 (MMGC);gene_id=Rv2500c;logic_name=ena +Chromosome ena gene 2813727 2814911 . - . ID=gene:Rv2500c;Name=fadE19;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE19 (MMGC);gene_id=Rv2500c;logic_name=ena Chromosome ena mRNA 2813727 2814911 . - . ID=transcript:Rv2500c;Parent=gene:Rv2500c;Name=fadE19-1;biotype=protein_coding;transcript_id=Rv2500c Chromosome ena exon 2813727 2814911 . - . Parent=transcript:Rv2500c;Name=Rv2500c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2500c-1;rank=1 Chromosome ena CDS 2813727 2814911 . - 0 ID=CDS:Rv2500c;Parent=transcript:Rv2500c;protein_id=Rv2500c ### -Chromosome ena gene 2814916 2816880 . - . ID=gene:Rv2501c;Name=accA1;biotype=protein_coding;description=Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA1: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv2501c;logic_name=ena +Chromosome ena gene 2814916 2816880 . - . ID=gene:Rv2501c;Name=accA1;biotype=protein_coding;description=Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA1: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv2501c;logic_name=ena Chromosome ena mRNA 2814916 2816880 . - . ID=transcript:Rv2501c;Parent=gene:Rv2501c;Name=accA1-1;biotype=protein_coding;transcript_id=Rv2501c Chromosome ena exon 2814916 2816880 . - . Parent=transcript:Rv2501c;Name=Rv2501c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2501c-1;rank=1 Chromosome ena CDS 2814916 2816880 . - 0 ID=CDS:Rv2501c;Parent=transcript:Rv2501c;protein_id=Rv2501c ### -Chromosome ena gene 2816885 2818474 . - . ID=gene:Rv2502c;Name=accD1;biotype=protein_coding;description=Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1;gene_id=Rv2502c;logic_name=ena +Chromosome ena gene 2816885 2818474 . - . ID=gene:Rv2502c;Name=accD1;biotype=protein_coding;description=Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1;gene_id=Rv2502c;logic_name=ena Chromosome ena mRNA 2816885 2818474 . - . ID=transcript:Rv2502c;Parent=gene:Rv2502c;Name=accD1-1;biotype=protein_coding;transcript_id=Rv2502c Chromosome ena exon 2816885 2818474 . - . Parent=transcript:Rv2502c;Name=Rv2502c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2502c-1;rank=1 Chromosome ena CDS 2816885 2818474 . - 0 ID=CDS:Rv2502c;Parent=transcript:Rv2502c;protein_id=Rv2502c ### -Chromosome ena gene 2818471 2819127 . - . ID=gene:Rv2503c;Name=scoB;biotype=protein_coding;description=Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB (3-oxo-acid:CoA transferase) (OXCT B) (succinyl CoA:3-oxoacid CoA-transferase);gene_id=Rv2503c;logic_name=ena +Chromosome ena gene 2818471 2819127 . - . ID=gene:Rv2503c;Name=scoB;biotype=protein_coding;description=Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB (3-oxo-acid:CoA transferase) (OXCT B) (succinyl CoA:3-oxoacid CoA-transferase);gene_id=Rv2503c;logic_name=ena Chromosome ena mRNA 2818471 2819127 . - . ID=transcript:Rv2503c;Parent=gene:Rv2503c;Name=scoB-1;biotype=protein_coding;transcript_id=Rv2503c Chromosome ena exon 2818471 2819127 . - . Parent=transcript:Rv2503c;Name=Rv2503c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2503c-1;rank=1 Chromosome ena CDS 2818471 2819127 . - 0 ID=CDS:Rv2503c;Parent=transcript:Rv2503c;protein_id=Rv2503c ### -Chromosome ena gene 2819124 2819870 . - . ID=gene:Rv2504c;Name=scoA;biotype=protein_coding;description=Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA (3-oxo acid:CoA transferase) (OXCT A) (succinyl-CoA:3-oxoacid-coenzyme A transferase);gene_id=Rv2504c;logic_name=ena +Chromosome ena gene 2819124 2819870 . - . ID=gene:Rv2504c;Name=scoA;biotype=protein_coding;description=Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA (3-oxo acid:CoA transferase) (OXCT A) (succinyl-CoA:3-oxoacid-coenzyme A transferase);gene_id=Rv2504c;logic_name=ena Chromosome ena mRNA 2819124 2819870 . - . ID=transcript:Rv2504c;Parent=gene:Rv2504c;Name=scoA-1;biotype=protein_coding;transcript_id=Rv2504c Chromosome ena exon 2819124 2819870 . - . Parent=transcript:Rv2504c;Name=Rv2504c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2504c-1;rank=1 Chromosome ena CDS 2819124 2819870 . - 0 ID=CDS:Rv2504c;Parent=transcript:Rv2504c;protein_id=Rv2504c ### -Chromosome ena gene 2819953 2821596 . - . ID=gene:Rv2505c;Name=fadD35;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2505c;logic_name=ena +Chromosome ena gene 2819953 2821596 . - . ID=gene:Rv2505c;Name=fadD35;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2505c;logic_name=ena Chromosome ena mRNA 2819953 2821596 . - . ID=transcript:Rv2505c;Parent=gene:Rv2505c;Name=fadD35-1;biotype=protein_coding;transcript_id=Rv2505c Chromosome ena exon 2819953 2821596 . - . Parent=transcript:Rv2505c;Name=Rv2505c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2505c-1;rank=1 Chromosome ena CDS 2819953 2821596 . - 0 ID=CDS:Rv2505c;Parent=transcript:Rv2505c;protein_id=Rv2505c ### -Chromosome ena gene 2821712 2822359 . + . ID=gene:Rv2506;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv2506;logic_name=ena +Chromosome ena gene 2821712 2822359 . + . ID=gene:Rv2506;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv2506;logic_name=ena Chromosome ena mRNA 2821712 2822359 . + . ID=transcript:Rv2506;Parent=gene:Rv2506;biotype=protein_coding;transcript_id=Rv2506 Chromosome ena exon 2821712 2822359 . + . Parent=transcript:Rv2506;Name=Rv2506-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2506-1;rank=1 Chromosome ena CDS 2821712 2822359 . + 0 ID=CDS:Rv2506;Parent=transcript:Rv2506;protein_id=Rv2506 ### -Chromosome ena gene 2822438 2823259 . + . ID=gene:Rv2507;biotype=protein_coding;description=Possible conserved proline rich membrane protein;gene_id=Rv2507;logic_name=ena +Chromosome ena gene 2822438 2823259 . + . ID=gene:Rv2507;biotype=protein_coding;description=Possible conserved proline rich membrane protein;gene_id=Rv2507;logic_name=ena Chromosome ena mRNA 2822438 2823259 . + . ID=transcript:Rv2507;Parent=gene:Rv2507;biotype=protein_coding;transcript_id=Rv2507 Chromosome ena exon 2822438 2823259 . + . Parent=transcript:Rv2507;Name=Rv2507-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2507-1;rank=1 Chromosome ena CDS 2822438 2823259 . + 0 ID=CDS:Rv2507;Parent=transcript:Rv2507;protein_id=Rv2507 ### -Chromosome ena gene 2823256 2824593 . - . ID=gene:Rv2508c;biotype=protein_coding;description=Probable conserved integral membrane leucine and alanine rich protein;gene_id=Rv2508c;logic_name=ena +Chromosome ena gene 2823256 2824593 . - . ID=gene:Rv2508c;biotype=protein_coding;description=Probable conserved integral membrane leucine and alanine rich protein;gene_id=Rv2508c;logic_name=ena Chromosome ena mRNA 2823256 2824593 . - . ID=transcript:Rv2508c;Parent=gene:Rv2508c;biotype=protein_coding;transcript_id=Rv2508c Chromosome ena exon 2823256 2824593 . - . Parent=transcript:Rv2508c;Name=Rv2508c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2508c-1;rank=1 Chromosome ena CDS 2823256 2824593 . - 0 ID=CDS:Rv2508c;Parent=transcript:Rv2508c;protein_id=Rv2508c ### -Chromosome ena gene 2824678 2825484 . + . ID=gene:Rv2509;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2509;logic_name=ena +Chromosome ena gene 2824678 2825484 . + . ID=gene:Rv2509;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2509;logic_name=ena Chromosome ena mRNA 2824678 2825484 . + . ID=transcript:Rv2509;Parent=gene:Rv2509;biotype=protein_coding;transcript_id=Rv2509 Chromosome ena exon 2824678 2825484 . + . Parent=transcript:Rv2509;Name=Rv2509-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2509-1;rank=1 Chromosome ena CDS 2824678 2825484 . + 0 ID=CDS:Rv2509;Parent=transcript:Rv2509;protein_id=Rv2509 ### -Chromosome ena gene 2825488 2827089 . - . ID=gene:Rv2510c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2510c;logic_name=ena +Chromosome ena gene 2825488 2827089 . - . ID=gene:Rv2510c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2510c;logic_name=ena Chromosome ena mRNA 2825488 2827089 . - . ID=transcript:Rv2510c;Parent=gene:Rv2510c;biotype=protein_coding;transcript_id=Rv2510c Chromosome ena exon 2825488 2827089 . - . Parent=transcript:Rv2510c;Name=Rv2510c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2510c-1;rank=1 Chromosome ena CDS 2825488 2827089 . - 0 ID=CDS:Rv2510c;Parent=transcript:Rv2510c;protein_id=Rv2510c ### -Chromosome ena gene 2827157 2827804 . + . ID=gene:Rv2511;Name=orn;biotype=protein_coding;description=Oligoribonuclease Orn;gene_id=Rv2511;logic_name=ena +Chromosome ena gene 2827157 2827804 . + . ID=gene:Rv2511;Name=orn;biotype=protein_coding;description=Oligoribonuclease Orn;gene_id=Rv2511;logic_name=ena Chromosome ena mRNA 2827157 2827804 . + . ID=transcript:Rv2511;Parent=gene:Rv2511;Name=orn-1;biotype=protein_coding;transcript_id=Rv2511 Chromosome ena exon 2827157 2827804 . + . Parent=transcript:Rv2511;Name=Rv2511-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2511-1;rank=1 Chromosome ena CDS 2827157 2827804 . + 0 ID=CDS:Rv2511;Parent=transcript:Rv2511;protein_id=Rv2511 @@ -13208,38 +13208,38 @@ Chromosome ena transcript 2827854 2827926 . + . ID=transcript:EBG00000313363;Par Chromosome ena exon 2827854 2827926 . + . Parent=transcript:EBG00000313363;Name=EBG00000313363;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313363;rank=1 ### Chromosome ena_gene biological_region 2827854 2827926 . + . external_name=AL123456.3:gene:2827854..2827926;logic_name=ena_gene -Chromosome ena_mobile_element biological_region 2828489 2829938 . - . external_name=IS1081-3%2C len: 1450 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element -Chromosome ena gene 2828556 2829803 . - . ID=gene:Rv2512c;biotype=protein_coding;description=Transposase for insertion sequence element IS1081;gene_id=Rv2512c;logic_name=ena +Chromosome ena_mobile_element biological_region 2828489 2829938 . - . external_name=IS1081-3%2C len: 1450 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element +Chromosome ena gene 2828556 2829803 . - . ID=gene:Rv2512c;biotype=protein_coding;description=Transposase for insertion sequence element IS1081;gene_id=Rv2512c;logic_name=ena Chromosome ena mRNA 2828556 2829803 . - . ID=transcript:Rv2512c;Parent=gene:Rv2512c;biotype=protein_coding;transcript_id=Rv2512c Chromosome ena exon 2828556 2829803 . - . Parent=transcript:Rv2512c;Name=Rv2512c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2512c-1;rank=1 Chromosome ena CDS 2828556 2829803 . - 0 ID=CDS:Rv2512c;Parent=transcript:Rv2512c;protein_id=Rv2512c ### -Chromosome ena gene 2830161 2830583 . + . ID=gene:Rv2513;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2513;logic_name=ena +Chromosome ena gene 2830161 2830583 . + . ID=gene:Rv2513;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2513;logic_name=ena Chromosome ena mRNA 2830161 2830583 . + . ID=transcript:Rv2513;Parent=gene:Rv2513;biotype=protein_coding;transcript_id=Rv2513 Chromosome ena exon 2830161 2830583 . + . Parent=transcript:Rv2513;Name=Rv2513-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2513-1;rank=1 Chromosome ena CDS 2830161 2830583 . + 0 ID=CDS:Rv2513;Parent=transcript:Rv2513;protein_id=Rv2513 ### -Chromosome ena gene 2830877 2831338 . - . ID=gene:Rv2514c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2514c;logic_name=ena +Chromosome ena gene 2830877 2831338 . - . ID=gene:Rv2514c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2514c;logic_name=ena Chromosome ena mRNA 2830877 2831338 . - . ID=transcript:Rv2514c;Parent=gene:Rv2514c;biotype=protein_coding;transcript_id=Rv2514c Chromosome ena exon 2830877 2831338 . - . Parent=transcript:Rv2514c;Name=Rv2514c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2514c-1;rank=1 Chromosome ena CDS 2830877 2831338 . - 0 ID=CDS:Rv2514c;Parent=transcript:Rv2514c;protein_id=Rv2514c ### -Chromosome ena gene 2831344 2832591 . - . ID=gene:Rv2515c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2515c;logic_name=ena +Chromosome ena gene 2831344 2832591 . - . ID=gene:Rv2515c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2515c;logic_name=ena Chromosome ena mRNA 2831344 2832591 . - . ID=transcript:Rv2515c;Parent=gene:Rv2515c;biotype=protein_coding;transcript_id=Rv2515c Chromosome ena exon 2831344 2832591 . - . Parent=transcript:Rv2515c;Name=Rv2515c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2515c-1;rank=1 Chromosome ena CDS 2831344 2832591 . - 0 ID=CDS:Rv2515c;Parent=transcript:Rv2515c;protein_id=Rv2515c ### -Chromosome ena gene 2832710 2833513 . - . ID=gene:Rv2516c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2516c;logic_name=ena +Chromosome ena gene 2832710 2833513 . - . ID=gene:Rv2516c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2516c;logic_name=ena Chromosome ena mRNA 2832710 2833513 . - . ID=transcript:Rv2516c;Parent=gene:Rv2516c;biotype=protein_coding;transcript_id=Rv2516c Chromosome ena exon 2832710 2833513 . - . Parent=transcript:Rv2516c;Name=Rv2516c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2516c-1;rank=1 Chromosome ena CDS 2832710 2833513 . - 0 ID=CDS:Rv2516c;Parent=transcript:Rv2516c;protein_id=Rv2516c ### -Chromosome ena gene 2833510 2833761 . - . ID=gene:Rv2517c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2517c;logic_name=ena +Chromosome ena gene 2833510 2833761 . - . ID=gene:Rv2517c;biotype=protein_coding;description=Unknown protein;gene_id=Rv2517c;logic_name=ena Chromosome ena mRNA 2833510 2833761 . - . ID=transcript:Rv2517c;Parent=gene:Rv2517c;biotype=protein_coding;transcript_id=Rv2517c Chromosome ena exon 2833510 2833761 . - . Parent=transcript:Rv2517c;Name=Rv2517c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2517c-1;rank=1 Chromosome ena CDS 2833510 2833761 . - 0 ID=CDS:Rv2517c;Parent=transcript:Rv2517c;protein_id=Rv2517c ### -Chromosome ena gene 2834109 2835335 . - . ID=gene:Rv2518c;Name=ldtB;biotype=protein_coding;description=Probable L%2CD-transpeptidase LdtB;gene_id=Rv2518c;logic_name=ena +Chromosome ena gene 2834109 2835335 . - . ID=gene:Rv2518c;Name=ldtB;biotype=protein_coding;description=Probable L%2CD-transpeptidase LdtB;gene_id=Rv2518c;logic_name=ena Chromosome ena mRNA 2834109 2835335 . - . ID=transcript:Rv2518c;Parent=gene:Rv2518c;Name=ldtB-1;biotype=protein_coding;transcript_id=Rv2518c Chromosome ena exon 2834109 2835335 . - . Parent=transcript:Rv2518c;Name=Rv2518c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2518c-1;rank=1 Chromosome ena CDS 2834109 2835335 . - 0 ID=CDS:Rv2518c;Parent=transcript:Rv2518c;protein_id=Rv2518c @@ -13249,222 +13249,222 @@ Chromosome ena transcript 2835494 2835566 . + . ID=transcript:EBG00000313316;Par Chromosome ena exon 2835494 2835566 . + . Parent=transcript:EBG00000313316;Name=EBG00000313316;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313316;rank=1 ### Chromosome ena_gene biological_region 2835494 2835566 . + . external_name=AL123456.3:gene:2835494..2835566;logic_name=ena_gene -Chromosome ena gene 2835785 2837263 . + . ID=gene:Rv2519;Name=PE26;biotype=protein_coding;description=PE family protein PE26;gene_id=Rv2519;logic_name=ena +Chromosome ena gene 2835785 2837263 . + . ID=gene:Rv2519;Name=PE26;biotype=protein_coding;description=PE family protein PE26;gene_id=Rv2519;logic_name=ena Chromosome ena mRNA 2835785 2837263 . + . ID=transcript:Rv2519;Parent=gene:Rv2519;Name=PE26-1;biotype=protein_coding;transcript_id=Rv2519 Chromosome ena exon 2835785 2837263 . + . Parent=transcript:Rv2519;Name=Rv2519-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2519-1;rank=1 Chromosome ena CDS 2835785 2837263 . + 0 ID=CDS:Rv2519;Parent=transcript:Rv2519;protein_id=Rv2519 ### -Chromosome ena gene 2837388 2837615 . - . ID=gene:Rv2520c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2520c;logic_name=ena +Chromosome ena gene 2837388 2837615 . - . ID=gene:Rv2520c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2520c;logic_name=ena Chromosome ena mRNA 2837388 2837615 . - . ID=transcript:Rv2520c;Parent=gene:Rv2520c;biotype=protein_coding;transcript_id=Rv2520c Chromosome ena exon 2837388 2837615 . - . Parent=transcript:Rv2520c;Name=Rv2520c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2520c-1;rank=1 Chromosome ena CDS 2837388 2837615 . - 0 ID=CDS:Rv2520c;Parent=transcript:Rv2520c;protein_id=Rv2520c ### -Chromosome ena gene 2837684 2838157 . + . ID=gene:Rv2521;Name=bcp;biotype=protein_coding;description=Probable bacterioferritin comigratory protein Bcp;gene_id=Rv2521;logic_name=ena +Chromosome ena gene 2837684 2838157 . + . ID=gene:Rv2521;Name=bcp;biotype=protein_coding;description=Probable bacterioferritin comigratory protein Bcp;gene_id=Rv2521;logic_name=ena Chromosome ena mRNA 2837684 2838157 . + . ID=transcript:Rv2521;Parent=gene:Rv2521;Name=bcp-1;biotype=protein_coding;transcript_id=Rv2521 Chromosome ena exon 2837684 2838157 . + . Parent=transcript:Rv2521;Name=Rv2521-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2521-1;rank=1 Chromosome ena CDS 2837684 2838157 . + 0 ID=CDS:Rv2521;Parent=transcript:Rv2521;protein_id=Rv2521 ### -Chromosome ena gene 2838129 2839541 . - . ID=gene:Rv2522c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2522c;logic_name=ena +Chromosome ena gene 2838129 2839541 . - . ID=gene:Rv2522c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2522c;logic_name=ena Chromosome ena mRNA 2838129 2839541 . - . ID=transcript:Rv2522c;Parent=gene:Rv2522c;biotype=protein_coding;transcript_id=Rv2522c Chromosome ena exon 2838129 2839541 . - . Parent=transcript:Rv2522c;Name=Rv2522c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2522c-1;rank=1 Chromosome ena CDS 2838129 2839541 . - 0 ID=CDS:Rv2522c;Parent=transcript:Rv2522c;protein_id=Rv2522c ### -Chromosome ena gene 2839538 2839930 . - . ID=gene:Rv2523c;Name=acpS;biotype=protein_coding;description=holo-[acyl-carrier protein] synthase AcpS (holo-ACP synthase) (CoA:APO-[ACP]pantetheinephosphotransferase) (CoA:APO-[acyl-carrier protein]pantetheinephosphotransferase);gene_id=Rv2523c;logic_name=ena +Chromosome ena gene 2839538 2839930 . - . ID=gene:Rv2523c;Name=acpS;biotype=protein_coding;description=holo-[acyl-carrier protein] synthase AcpS (holo-ACP synthase) (CoA:APO-[ACP]pantetheinephosphotransferase) (CoA:APO-[acyl-carrier protein]pantetheinephosphotransferase);gene_id=Rv2523c;logic_name=ena Chromosome ena mRNA 2839538 2839930 . - . ID=transcript:Rv2523c;Parent=gene:Rv2523c;Name=acpS-1;biotype=protein_coding;transcript_id=Rv2523c Chromosome ena exon 2839538 2839930 . - . Parent=transcript:Rv2523c;Name=Rv2523c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2523c-1;rank=1 Chromosome ena CDS 2839538 2839930 . - 0 ID=CDS:Rv2523c;Parent=transcript:Rv2523c;protein_id=Rv2523c ### -Chromosome ena gene 2840123 2849332 . - . ID=gene:Rv2524c;Name=fas;biotype=protein_coding;description=Probable fatty acid synthase Fas (fatty acid synthetase);gene_id=Rv2524c;logic_name=ena +Chromosome ena gene 2840123 2849332 . - . ID=gene:Rv2524c;Name=fas;biotype=protein_coding;description=Probable fatty acid synthase Fas (fatty acid synthetase);gene_id=Rv2524c;logic_name=ena Chromosome ena mRNA 2840123 2849332 . - . ID=transcript:Rv2524c;Parent=gene:Rv2524c;Name=fas-1;biotype=protein_coding;transcript_id=Rv2524c Chromosome ena exon 2840123 2849332 . - . Parent=transcript:Rv2524c;Name=Rv2524c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2524c-1;rank=1 Chromosome ena CDS 2840123 2849332 . - 0 ID=CDS:Rv2524c;Parent=transcript:Rv2524c;protein_id=Rv2524c ### -Chromosome ena gene 2849852 2850574 . - . ID=gene:Rv2525c;biotype=protein_coding;description=Conserved hypothetical protein. Secreted%3B predicted to be a substrate of the twin arginine translocation (tat) export system.;gene_id=Rv2525c;logic_name=ena +Chromosome ena gene 2849852 2850574 . - . ID=gene:Rv2525c;biotype=protein_coding;description=Conserved hypothetical protein. Secreted%3B predicted to be a substrate of the twin arginine translocation (tat) export system.;gene_id=Rv2525c;logic_name=ena Chromosome ena mRNA 2849852 2850574 . - . ID=transcript:Rv2525c;Parent=gene:Rv2525c;biotype=protein_coding;transcript_id=Rv2525c Chromosome ena exon 2849852 2850574 . - . Parent=transcript:Rv2525c;Name=Rv2525c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2525c-1;rank=1 Chromosome ena CDS 2849852 2850574 . - 0 ID=CDS:Rv2525c;Parent=transcript:Rv2525c;protein_id=Rv2525c ### -Chromosome ena gene 2851091 2851318 . + . ID=gene:Rv2526;Name=vapB17;biotype=protein_coding;description=Possible antitoxin VapB17;gene_id=Rv2526;logic_name=ena +Chromosome ena gene 2851091 2851318 . + . ID=gene:Rv2526;Name=vapB17;biotype=protein_coding;description=Possible antitoxin VapB17;gene_id=Rv2526;logic_name=ena Chromosome ena mRNA 2851091 2851318 . + . ID=transcript:Rv2526;Parent=gene:Rv2526;Name=vapB17-1;biotype=protein_coding;transcript_id=Rv2526 Chromosome ena exon 2851091 2851318 . + . Parent=transcript:Rv2526;Name=Rv2526-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2526-1;rank=1 Chromosome ena CDS 2851091 2851318 . + 0 ID=CDS:Rv2526;Parent=transcript:Rv2526;protein_id=Rv2526 ### -Chromosome ena gene 2851315 2851716 . + . ID=gene:Rv2527;Name=vapC17;biotype=protein_coding;description=Possible toxin VapC17;gene_id=Rv2527;logic_name=ena +Chromosome ena gene 2851315 2851716 . + . ID=gene:Rv2527;Name=vapC17;biotype=protein_coding;description=Possible toxin VapC17;gene_id=Rv2527;logic_name=ena Chromosome ena mRNA 2851315 2851716 . + . ID=transcript:Rv2527;Parent=gene:Rv2527;Name=vapC17-1;biotype=protein_coding;transcript_id=Rv2527 Chromosome ena exon 2851315 2851716 . + . Parent=transcript:Rv2527;Name=Rv2527-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2527-1;rank=1 Chromosome ena CDS 2851315 2851716 . + 0 ID=CDS:Rv2527;Parent=transcript:Rv2527;protein_id=Rv2527 ### -Chromosome ena gene 2851751 2852671 . - . ID=gene:Rv2528c;Name=mrr;biotype=protein_coding;description=Probable restriction system protein Mrr;gene_id=Rv2528c;logic_name=ena +Chromosome ena gene 2851751 2852671 . - . ID=gene:Rv2528c;Name=mrr;biotype=protein_coding;description=Probable restriction system protein Mrr;gene_id=Rv2528c;logic_name=ena Chromosome ena mRNA 2851751 2852671 . - . ID=transcript:Rv2528c;Parent=gene:Rv2528c;Name=mrr-1;biotype=protein_coding;transcript_id=Rv2528c Chromosome ena exon 2851751 2852671 . - . Parent=transcript:Rv2528c;Name=Rv2528c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2528c-1;rank=1 Chromosome ena CDS 2851751 2852671 . - 0 ID=CDS:Rv2528c;Parent=transcript:Rv2528c;protein_id=Rv2528c ### -Chromosome ena gene 2852875 2854266 . + . ID=gene:Rv2529;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2529;logic_name=ena +Chromosome ena gene 2852875 2854266 . + . ID=gene:Rv2529;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2529;logic_name=ena Chromosome ena mRNA 2852875 2854266 . + . ID=transcript:Rv2529;Parent=gene:Rv2529;biotype=protein_coding;transcript_id=Rv2529 Chromosome ena exon 2852875 2854266 . + . Parent=transcript:Rv2529;Name=Rv2529-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2529-1;rank=1 Chromosome ena CDS 2852875 2854266 . + 0 ID=CDS:Rv2529;Parent=transcript:Rv2529;protein_id=Rv2529 ### -Chromosome ena gene 2854267 2854686 . - . ID=gene:Rv2530c;Name=vapC39;biotype=protein_coding;description=Possible toxin VapC39. Contains PIN domain.;gene_id=Rv2530c;logic_name=ena +Chromosome ena gene 2854267 2854686 . - . ID=gene:Rv2530c;Name=vapC39;biotype=protein_coding;description=Possible toxin VapC39. Contains PIN domain.;gene_id=Rv2530c;logic_name=ena Chromosome ena mRNA 2854267 2854686 . - . ID=transcript:Rv2530c;Parent=gene:Rv2530c;Name=vapC39-1;biotype=protein_coding;transcript_id=Rv2530c Chromosome ena exon 2854267 2854686 . - . Parent=transcript:Rv2530c;Name=Rv2530c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2530c-1;rank=1 Chromosome ena CDS 2854267 2854686 . - 0 ID=CDS:Rv2530c;Parent=transcript:Rv2530c;protein_id=Rv2530c ### -Chromosome ena gene 2854683 2854907 . - . ID=gene:Rv2530A;Name=vapB39;biotype=protein_coding;description=Possible antitoxin VapB39;gene_id=Rv2530A;logic_name=ena +Chromosome ena gene 2854683 2854907 . - . ID=gene:Rv2530A;Name=vapB39;biotype=protein_coding;description=Possible antitoxin VapB39;gene_id=Rv2530A;logic_name=ena Chromosome ena mRNA 2854683 2854907 . - . ID=transcript:Rv2530A;Parent=gene:Rv2530A;Name=vapB39-1;biotype=protein_coding;transcript_id=Rv2530A Chromosome ena exon 2854683 2854907 . - . Parent=transcript:Rv2530A;Name=Rv2530A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2530A-1;rank=1 Chromosome ena CDS 2854683 2854907 . - 0 ID=CDS:Rv2530A;Parent=transcript:Rv2530A;protein_id=Rv2530A ### -Chromosome ena gene 2854938 2857781 . - . ID=gene:Rv2531c;biotype=protein_coding;description=Probable amino acid decarboxylase;gene_id=Rv2531c;logic_name=ena +Chromosome ena gene 2854938 2857781 . - . ID=gene:Rv2531c;biotype=protein_coding;description=Probable amino acid decarboxylase;gene_id=Rv2531c;logic_name=ena Chromosome ena mRNA 2854938 2857781 . - . ID=transcript:Rv2531c;Parent=gene:Rv2531c;biotype=protein_coding;transcript_id=Rv2531c Chromosome ena exon 2854938 2857781 . - . Parent=transcript:Rv2531c;Name=Rv2531c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2531c-1;rank=1 Chromosome ena CDS 2854938 2857781 . - 0 ID=CDS:Rv2531c;Parent=transcript:Rv2531c;protein_id=Rv2531c ### -Chromosome ena gene 2857853 2858254 . - . ID=gene:Rv2532c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2532c;logic_name=ena +Chromosome ena gene 2857853 2858254 . - . ID=gene:Rv2532c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2532c;logic_name=ena Chromosome ena mRNA 2857853 2858254 . - . ID=transcript:Rv2532c;Parent=gene:Rv2532c;biotype=protein_coding;transcript_id=Rv2532c Chromosome ena exon 2857853 2858254 . - . Parent=transcript:Rv2532c;Name=Rv2532c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2532c-1;rank=1 Chromosome ena CDS 2857853 2858254 . - 0 ID=CDS:Rv2532c;Parent=transcript:Rv2532c;protein_id=Rv2532c ### -Chromosome ena gene 2858254 2858724 . - . ID=gene:Rv2533c;Name=nusB;biotype=protein_coding;description=N utilization substance protein NusB (NusB protein);gene_id=Rv2533c;logic_name=ena +Chromosome ena gene 2858254 2858724 . - . ID=gene:Rv2533c;Name=nusB;biotype=protein_coding;description=N utilization substance protein NusB (NusB protein);gene_id=Rv2533c;logic_name=ena Chromosome ena mRNA 2858254 2858724 . - . ID=transcript:Rv2533c;Parent=gene:Rv2533c;Name=nusB-1;biotype=protein_coding;transcript_id=Rv2533c Chromosome ena exon 2858254 2858724 . - . Parent=transcript:Rv2533c;Name=Rv2533c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2533c-1;rank=1 Chromosome ena CDS 2858254 2858724 . - 0 ID=CDS:Rv2533c;Parent=transcript:Rv2533c;protein_id=Rv2533c ### -Chromosome ena gene 2858727 2859290 . - . ID=gene:Rv2534c;Name=efp;biotype=protein_coding;description=Probable elongation factor P Efp;gene_id=Rv2534c;logic_name=ena +Chromosome ena gene 2858727 2859290 . - . ID=gene:Rv2534c;Name=efp;biotype=protein_coding;description=Probable elongation factor P Efp;gene_id=Rv2534c;logic_name=ena Chromosome ena mRNA 2858727 2859290 . - . ID=transcript:Rv2534c;Parent=gene:Rv2534c;Name=efp-1;biotype=protein_coding;transcript_id=Rv2534c Chromosome ena exon 2858727 2859290 . - . Parent=transcript:Rv2534c;Name=Rv2534c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2534c-1;rank=1 Chromosome ena CDS 2858727 2859290 . - 0 ID=CDS:Rv2534c;Parent=transcript:Rv2534c;protein_id=Rv2534c ### -Chromosome ena gene 2859300 2860418 . - . ID=gene:Rv2535c;Name=pepQ;biotype=protein_coding;description=Probable cytoplasmic peptidase PepQ;gene_id=Rv2535c;logic_name=ena +Chromosome ena gene 2859300 2860418 . - . ID=gene:Rv2535c;Name=pepQ;biotype=protein_coding;description=Probable cytoplasmic peptidase PepQ;gene_id=Rv2535c;logic_name=ena Chromosome ena mRNA 2859300 2860418 . - . ID=transcript:Rv2535c;Parent=gene:Rv2535c;Name=pepQ-1;biotype=protein_coding;transcript_id=Rv2535c Chromosome ena exon 2859300 2860418 . - . Parent=transcript:Rv2535c;Name=Rv2535c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2535c-1;rank=1 Chromosome ena CDS 2859300 2860418 . - 0 ID=CDS:Rv2535c;Parent=transcript:Rv2535c;protein_id=Rv2535c ### -Chromosome ena gene 2860452 2861144 . + . ID=gene:Rv2536;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2536;logic_name=ena +Chromosome ena gene 2860452 2861144 . + . ID=gene:Rv2536;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2536;logic_name=ena Chromosome ena mRNA 2860452 2861144 . + . ID=transcript:Rv2536;Parent=gene:Rv2536;biotype=protein_coding;transcript_id=Rv2536 Chromosome ena exon 2860452 2861144 . + . Parent=transcript:Rv2536;Name=Rv2536-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2536-1;rank=1 Chromosome ena CDS 2860452 2861144 . + 0 ID=CDS:Rv2536;Parent=transcript:Rv2536;protein_id=Rv2536 ### -Chromosome ena gene 2861148 2861591 . - . ID=gene:Rv2537c;Name=aroD;biotype=protein_coding;description=3-dehydroquinate dehydratase AroD (AROQ) (3-dehydroquinase) (type II dhqase);gene_id=Rv2537c;logic_name=ena +Chromosome ena gene 2861148 2861591 . - . ID=gene:Rv2537c;Name=aroD;biotype=protein_coding;description=3-dehydroquinate dehydratase AroD (AROQ) (3-dehydroquinase) (type II dhqase);gene_id=Rv2537c;logic_name=ena Chromosome ena mRNA 2861148 2861591 . - . ID=transcript:Rv2537c;Parent=gene:Rv2537c;Name=aroD-1;biotype=protein_coding;transcript_id=Rv2537c Chromosome ena exon 2861148 2861591 . - . Parent=transcript:Rv2537c;Name=Rv2537c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2537c-1;rank=1 Chromosome ena CDS 2861148 2861591 . - 0 ID=CDS:Rv2537c;Parent=transcript:Rv2537c;protein_id=Rv2537c ### -Chromosome ena gene 2861588 2862676 . - . ID=gene:Rv2538c;Name=aroB;biotype=protein_coding;description=3-dehydroquinate synthase AroB;gene_id=Rv2538c;logic_name=ena +Chromosome ena gene 2861588 2862676 . - . ID=gene:Rv2538c;Name=aroB;biotype=protein_coding;description=3-dehydroquinate synthase AroB;gene_id=Rv2538c;logic_name=ena Chromosome ena mRNA 2861588 2862676 . - . ID=transcript:Rv2538c;Parent=gene:Rv2538c;Name=aroB-1;biotype=protein_coding;transcript_id=Rv2538c Chromosome ena exon 2861588 2862676 . - . Parent=transcript:Rv2538c;Name=Rv2538c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2538c-1;rank=1 Chromosome ena CDS 2861588 2862676 . - 0 ID=CDS:Rv2538c;Parent=transcript:Rv2538c;protein_id=Rv2538c ### -Chromosome ena gene 2862673 2863203 . - . ID=gene:Rv2539c;Name=aroK;biotype=protein_coding;description=Shikimate kinase AroK (SK);gene_id=Rv2539c;logic_name=ena +Chromosome ena gene 2862673 2863203 . - . ID=gene:Rv2539c;Name=aroK;biotype=protein_coding;description=Shikimate kinase AroK (SK);gene_id=Rv2539c;logic_name=ena Chromosome ena mRNA 2862673 2863203 . - . ID=transcript:Rv2539c;Parent=gene:Rv2539c;Name=aroK-1;biotype=protein_coding;transcript_id=Rv2539c Chromosome ena exon 2862673 2863203 . - . Parent=transcript:Rv2539c;Name=Rv2539c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2539c-1;rank=1 Chromosome ena CDS 2862673 2863203 . - 0 ID=CDS:Rv2539c;Parent=transcript:Rv2539c;protein_id=Rv2539c ### -Chromosome ena gene 2863207 2864412 . - . ID=gene:Rv2540c;Name=aroF;biotype=protein_coding;description=Probable chorismate synthase AroF (5-enolpyruvylshikimate-3-phosphate phospholyase);gene_id=Rv2540c;logic_name=ena +Chromosome ena gene 2863207 2864412 . - . ID=gene:Rv2540c;Name=aroF;biotype=protein_coding;description=Probable chorismate synthase AroF (5-enolpyruvylshikimate-3-phosphate phospholyase);gene_id=Rv2540c;logic_name=ena Chromosome ena mRNA 2863207 2864412 . - . ID=transcript:Rv2540c;Parent=gene:Rv2540c;Name=aroF-1;biotype=protein_coding;transcript_id=Rv2540c Chromosome ena exon 2863207 2864412 . - . Parent=transcript:Rv2540c;Name=Rv2540c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2540c-1;rank=1 Chromosome ena CDS 2863207 2864412 . - 0 ID=CDS:Rv2540c;Parent=transcript:Rv2540c;protein_id=Rv2540c ### -Chromosome ena gene 2864427 2864834 . + . ID=gene:Rv2541;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv2541;logic_name=ena +Chromosome ena gene 2864427 2864834 . + . ID=gene:Rv2541;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv2541;logic_name=ena Chromosome ena mRNA 2864427 2864834 . + . ID=transcript:Rv2541;Parent=gene:Rv2541;biotype=protein_coding;transcript_id=Rv2541 Chromosome ena exon 2864427 2864834 . + . Parent=transcript:Rv2541;Name=Rv2541-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2541-1;rank=1 Chromosome ena CDS 2864427 2864834 . + 0 ID=CDS:Rv2541;Parent=transcript:Rv2541;protein_id=Rv2541 ### -Chromosome ena gene 2865130 2866341 . + . ID=gene:Rv2542;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2542;logic_name=ena +Chromosome ena gene 2865130 2866341 . + . ID=gene:Rv2542;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2542;logic_name=ena Chromosome ena mRNA 2865130 2866341 . + . ID=transcript:Rv2542;Parent=gene:Rv2542;biotype=protein_coding;transcript_id=Rv2542 Chromosome ena exon 2865130 2866341 . + . Parent=transcript:Rv2542;Name=Rv2542-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2542-1;rank=1 Chromosome ena CDS 2865130 2866341 . + 0 ID=CDS:Rv2542;Parent=transcript:Rv2542;protein_id=Rv2542 ### -Chromosome ena gene 2866468 2867127 . + . ID=gene:Rv2543;Name=lppA;biotype=protein_coding;description=Probable conserved lipoprotein LppA;gene_id=Rv2543;logic_name=ena +Chromosome ena gene 2866468 2867127 . + . ID=gene:Rv2543;Name=lppA;biotype=protein_coding;description=Probable conserved lipoprotein LppA;gene_id=Rv2543;logic_name=ena Chromosome ena mRNA 2866468 2867127 . + . ID=transcript:Rv2543;Parent=gene:Rv2543;Name=lppA-1;biotype=protein_coding;transcript_id=Rv2543 Chromosome ena exon 2866468 2867127 . + . Parent=transcript:Rv2543;Name=Rv2543-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2543-1;rank=1 Chromosome ena CDS 2866468 2867127 . + 0 ID=CDS:Rv2543;Parent=transcript:Rv2543;protein_id=Rv2543 ### -Chromosome ena gene 2867124 2867786 . + . ID=gene:Rv2544;Name=lppB;biotype=protein_coding;description=Probable conserved lipoprotein LppB;gene_id=Rv2544;logic_name=ena +Chromosome ena gene 2867124 2867786 . + . ID=gene:Rv2544;Name=lppB;biotype=protein_coding;description=Probable conserved lipoprotein LppB;gene_id=Rv2544;logic_name=ena Chromosome ena mRNA 2867124 2867786 . + . ID=transcript:Rv2544;Parent=gene:Rv2544;Name=lppB-1;biotype=protein_coding;transcript_id=Rv2544 Chromosome ena exon 2867124 2867786 . + . Parent=transcript:Rv2544;Name=Rv2544-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2544-1;rank=1 Chromosome ena CDS 2867124 2867786 . + 0 ID=CDS:Rv2544;Parent=transcript:Rv2544;protein_id=Rv2544 ### -Chromosome ena gene 2867783 2868061 . + . ID=gene:Rv2545;Name=vapB18;biotype=protein_coding;description=Possible antitoxin VapB18;gene_id=Rv2545;logic_name=ena +Chromosome ena gene 2867783 2868061 . + . ID=gene:Rv2545;Name=vapB18;biotype=protein_coding;description=Possible antitoxin VapB18;gene_id=Rv2545;logic_name=ena Chromosome ena mRNA 2867783 2868061 . + . ID=transcript:Rv2545;Parent=gene:Rv2545;Name=vapB18-1;biotype=protein_coding;transcript_id=Rv2545 Chromosome ena exon 2867783 2868061 . + . Parent=transcript:Rv2545;Name=Rv2545-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2545-1;rank=1 Chromosome ena CDS 2867783 2868061 . + 0 ID=CDS:Rv2545;Parent=transcript:Rv2545;protein_id=Rv2545 ### -Chromosome ena gene 2868154 2868567 . + . ID=gene:Rv2546;Name=vapC18;biotype=protein_coding;description=Possible toxin VapC18;gene_id=Rv2546;logic_name=ena +Chromosome ena gene 2868154 2868567 . + . ID=gene:Rv2546;Name=vapC18;biotype=protein_coding;description=Possible toxin VapC18;gene_id=Rv2546;logic_name=ena Chromosome ena mRNA 2868154 2868567 . + . ID=transcript:Rv2546;Parent=gene:Rv2546;Name=vapC18-1;biotype=protein_coding;transcript_id=Rv2546 Chromosome ena exon 2868154 2868567 . + . Parent=transcript:Rv2546;Name=Rv2546-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2546-1;rank=1 Chromosome ena CDS 2868154 2868567 . + 0 ID=CDS:Rv2546;Parent=transcript:Rv2546;protein_id=Rv2546 ### -Chromosome ena gene 2868606 2868863 . + . ID=gene:Rv2547;Name=vapB19;biotype=protein_coding;description=Possible antitoxin VapB19;gene_id=Rv2547;logic_name=ena +Chromosome ena gene 2868606 2868863 . + . ID=gene:Rv2547;Name=vapB19;biotype=protein_coding;description=Possible antitoxin VapB19;gene_id=Rv2547;logic_name=ena Chromosome ena mRNA 2868606 2868863 . + . ID=transcript:Rv2547;Parent=gene:Rv2547;Name=vapB19-1;biotype=protein_coding;transcript_id=Rv2547 Chromosome ena exon 2868606 2868863 . + . Parent=transcript:Rv2547;Name=Rv2547-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2547-1;rank=1 Chromosome ena CDS 2868606 2868863 . + 0 ID=CDS:Rv2547;Parent=transcript:Rv2547;protein_id=Rv2547 ### -Chromosome ena gene 2868860 2869237 . + . ID=gene:Rv2548;Name=vapC19;biotype=protein_coding;description=Possible toxin VapC19;gene_id=Rv2548;logic_name=ena +Chromosome ena gene 2868860 2869237 . + . ID=gene:Rv2548;Name=vapC19;biotype=protein_coding;description=Possible toxin VapC19;gene_id=Rv2548;logic_name=ena Chromosome ena mRNA 2868860 2869237 . + . ID=transcript:Rv2548;Parent=gene:Rv2548;Name=vapC19-1;biotype=protein_coding;transcript_id=Rv2548 Chromosome ena exon 2868860 2869237 . + . Parent=transcript:Rv2548;Name=Rv2548-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2548-1;rank=1 Chromosome ena CDS 2868860 2869237 . + 0 ID=CDS:Rv2548;Parent=transcript:Rv2548;protein_id=Rv2548 ### -Chromosome ena gene 2869253 2869627 . - . ID=gene:Rv2548A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2548A;logic_name=ena +Chromosome ena gene 2869253 2869627 . - . ID=gene:Rv2548A;biotype=protein_coding;description=Conserved protein;gene_id=Rv2548A;logic_name=ena Chromosome ena mRNA 2869253 2869627 . - . ID=transcript:Rv2548A;Parent=gene:Rv2548A;biotype=protein_coding;transcript_id=Rv2548A Chromosome ena exon 2869253 2869627 . - . Parent=transcript:Rv2548A;Name=Rv2548A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2548A-1;rank=1 Chromosome ena CDS 2869253 2869627 . - 0 ID=CDS:Rv2548A;Parent=transcript:Rv2548A;protein_id=Rv2548A ### -Chromosome ena gene 2869727 2870122 . - . ID=gene:Rv2549c;Name=vapC20;biotype=protein_coding;description=Possible toxin VapC20;gene_id=Rv2549c;logic_name=ena +Chromosome ena gene 2869727 2870122 . - . ID=gene:Rv2549c;Name=vapC20;biotype=protein_coding;description=Possible toxin VapC20;gene_id=Rv2549c;logic_name=ena Chromosome ena mRNA 2869727 2870122 . - . ID=transcript:Rv2549c;Parent=gene:Rv2549c;Name=vapC20-1;biotype=protein_coding;transcript_id=Rv2549c Chromosome ena exon 2869727 2870122 . - . Parent=transcript:Rv2549c;Name=Rv2549c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2549c-1;rank=1 Chromosome ena CDS 2869727 2870122 . - 0 ID=CDS:Rv2549c;Parent=transcript:Rv2549c;protein_id=Rv2549c ### -Chromosome ena gene 2870119 2870364 . - . ID=gene:Rv2550c;Name=vapB20;biotype=protein_coding;description=Possible antitoxin VapB20;gene_id=Rv2550c;logic_name=ena +Chromosome ena gene 2870119 2870364 . - . ID=gene:Rv2550c;Name=vapB20;biotype=protein_coding;description=Possible antitoxin VapB20;gene_id=Rv2550c;logic_name=ena Chromosome ena mRNA 2870119 2870364 . - . ID=transcript:Rv2550c;Parent=gene:Rv2550c;Name=vapB20-1;biotype=protein_coding;transcript_id=Rv2550c Chromosome ena exon 2870119 2870364 . - . Parent=transcript:Rv2550c;Name=Rv2550c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2550c-1;rank=1 Chromosome ena CDS 2870119 2870364 . - 0 ID=CDS:Rv2550c;Parent=transcript:Rv2550c;protein_id=Rv2550c ### -Chromosome ena gene 2870775 2871194 . - . ID=gene:Rv2551c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2551c;logic_name=ena +Chromosome ena gene 2870775 2871194 . - . ID=gene:Rv2551c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2551c;logic_name=ena Chromosome ena mRNA 2870775 2871194 . - . ID=transcript:Rv2551c;Parent=gene:Rv2551c;biotype=protein_coding;transcript_id=Rv2551c Chromosome ena exon 2870775 2871194 . - . Parent=transcript:Rv2551c;Name=Rv2551c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2551c-1;rank=1 Chromosome ena CDS 2870775 2871194 . - 0 ID=CDS:Rv2551c;Parent=transcript:Rv2551c;protein_id=Rv2551c ### -Chromosome ena gene 2871206 2872015 . - . ID=gene:Rv2552c;Name=aroE;biotype=protein_coding;description=Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase);gene_id=Rv2552c;logic_name=ena +Chromosome ena gene 2871206 2872015 . - . ID=gene:Rv2552c;Name=aroE;biotype=protein_coding;description=Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase);gene_id=Rv2552c;logic_name=ena Chromosome ena mRNA 2871206 2872015 . - . ID=transcript:Rv2552c;Parent=gene:Rv2552c;Name=aroE-1;biotype=protein_coding;transcript_id=Rv2552c Chromosome ena exon 2871206 2872015 . - . Parent=transcript:Rv2552c;Name=Rv2552c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2552c-1;rank=1 Chromosome ena CDS 2871206 2872015 . - 0 ID=CDS:Rv2552c;Parent=transcript:Rv2552c;protein_id=Rv2552c ### -Chromosome ena gene 2872012 2873265 . - . ID=gene:Rv2553c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2553c;logic_name=ena +Chromosome ena gene 2872012 2873265 . - . ID=gene:Rv2553c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2553c;logic_name=ena Chromosome ena mRNA 2872012 2873265 . - . ID=transcript:Rv2553c;Parent=gene:Rv2553c;biotype=protein_coding;transcript_id=Rv2553c Chromosome ena exon 2872012 2873265 . - . Parent=transcript:Rv2553c;Name=Rv2553c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2553c-1;rank=1 Chromosome ena CDS 2872012 2873265 . - 0 ID=CDS:Rv2553c;Parent=transcript:Rv2553c;protein_id=Rv2553c ### -Chromosome ena gene 2873258 2873770 . - . ID=gene:Rv2554c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2554c;logic_name=ena +Chromosome ena gene 2873258 2873770 . - . ID=gene:Rv2554c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2554c;logic_name=ena Chromosome ena mRNA 2873258 2873770 . - . ID=transcript:Rv2554c;Parent=gene:Rv2554c;biotype=protein_coding;transcript_id=Rv2554c Chromosome ena exon 2873258 2873770 . - . Parent=transcript:Rv2554c;Name=Rv2554c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2554c-1;rank=1 Chromosome ena CDS 2873258 2873770 . - 0 ID=CDS:Rv2554c;Parent=transcript:Rv2554c;protein_id=Rv2554c ### -Chromosome ena gene 2873771 2876485 . - . ID=gene:Rv2555c;Name=alaS;biotype=protein_coding;description=Probable alanyl-tRNA synthetase AlaS (alanine--tRNA ligase) (alanine translase) (ALARS);gene_id=Rv2555c;logic_name=ena +Chromosome ena gene 2873771 2876485 . - . ID=gene:Rv2555c;Name=alaS;biotype=protein_coding;description=Probable alanyl-tRNA synthetase AlaS (alanine--tRNA ligase) (alanine translase) (ALARS);gene_id=Rv2555c;logic_name=ena Chromosome ena mRNA 2873771 2876485 . - . ID=transcript:Rv2555c;Parent=gene:Rv2555c;Name=alaS-1;biotype=protein_coding;transcript_id=Rv2555c Chromosome ena exon 2873771 2876485 . - . Parent=transcript:Rv2555c;Name=Rv2555c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2555c-1;rank=1 Chromosome ena CDS 2873771 2876485 . - 0 ID=CDS:Rv2555c;Parent=transcript:Rv2555c;protein_id=Rv2555c ### -Chromosome ena gene 2876576 2876965 . - . ID=gene:Rv2556c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2556c;logic_name=ena +Chromosome ena gene 2876576 2876965 . - . ID=gene:Rv2556c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2556c;logic_name=ena Chromosome ena mRNA 2876576 2876965 . - . ID=transcript:Rv2556c;Parent=gene:Rv2556c;biotype=protein_coding;transcript_id=Rv2556c Chromosome ena exon 2876576 2876965 . - . Parent=transcript:Rv2556c;Name=Rv2556c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2556c-1;rank=1 Chromosome ena CDS 2876576 2876965 . - 0 ID=CDS:Rv2556c;Parent=transcript:Rv2556c;protein_id=Rv2556c ### -Chromosome ena gene 2877072 2877746 . + . ID=gene:Rv2557;biotype=protein_coding;description=Conserved protein;gene_id=Rv2557;logic_name=ena +Chromosome ena gene 2877072 2877746 . + . ID=gene:Rv2557;biotype=protein_coding;description=Conserved protein;gene_id=Rv2557;logic_name=ena Chromosome ena mRNA 2877072 2877746 . + . ID=transcript:Rv2557;Parent=gene:Rv2557;biotype=protein_coding;transcript_id=Rv2557 Chromosome ena exon 2877072 2877746 . + . Parent=transcript:Rv2557;Name=Rv2557-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2557-1;rank=1 Chromosome ena CDS 2877072 2877746 . + 0 ID=CDS:Rv2557;Parent=transcript:Rv2557;protein_id=Rv2557 ### -Chromosome ena gene 2877831 2878541 . + . ID=gene:Rv2558;biotype=protein_coding;description=Conserved protein;gene_id=Rv2558;logic_name=ena +Chromosome ena gene 2877831 2878541 . + . ID=gene:Rv2558;biotype=protein_coding;description=Conserved protein;gene_id=Rv2558;logic_name=ena Chromosome ena mRNA 2877831 2878541 . + . ID=transcript:Rv2558;Parent=gene:Rv2558;biotype=protein_coding;transcript_id=Rv2558 Chromosome ena exon 2877831 2878541 . + . Parent=transcript:Rv2558;Name=Rv2558-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2558-1;rank=1 Chromosome ena CDS 2877831 2878541 . + 0 ID=CDS:Rv2558;Parent=transcript:Rv2558;protein_id=Rv2558 ### -Chromosome ena gene 2878571 2879929 . - . ID=gene:Rv2559c;biotype=protein_coding;description=Conserved hypothetical alanine leucine valine rich protein;gene_id=Rv2559c;logic_name=ena +Chromosome ena gene 2878571 2879929 . - . ID=gene:Rv2559c;biotype=protein_coding;description=Conserved hypothetical alanine leucine valine rich protein;gene_id=Rv2559c;logic_name=ena Chromosome ena mRNA 2878571 2879929 . - . ID=transcript:Rv2559c;Parent=gene:Rv2559c;biotype=protein_coding;transcript_id=Rv2559c Chromosome ena exon 2878571 2879929 . - . Parent=transcript:Rv2559c;Name=Rv2559c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2559c-1;rank=1 Chromosome ena CDS 2878571 2879929 . - 0 ID=CDS:Rv2559c;Parent=transcript:Rv2559c;protein_id=Rv2559c ### -Chromosome ena gene 2880075 2881052 . + . ID=gene:Rv2560;biotype=protein_coding;description=Probable proline and glycine rich transmembrane protein;gene_id=Rv2560;logic_name=ena +Chromosome ena gene 2880075 2881052 . + . ID=gene:Rv2560;biotype=protein_coding;description=Probable proline and glycine rich transmembrane protein;gene_id=Rv2560;logic_name=ena Chromosome ena mRNA 2880075 2881052 . + . ID=transcript:Rv2560;Parent=gene:Rv2560;biotype=protein_coding;transcript_id=Rv2560 Chromosome ena exon 2880075 2881052 . + . Parent=transcript:Rv2560;Name=Rv2560-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2560-1;rank=1 Chromosome ena CDS 2880075 2881052 . + 0 ID=CDS:Rv2560;Parent=transcript:Rv2560;protein_id=Rv2560 @@ -13474,12 +13474,12 @@ Chromosome ena transcript 2881252 2881320 . + . ID=transcript:EBG00000313368;Par Chromosome ena exon 2881252 2881320 . + . Parent=transcript:EBG00000313368;Name=EBG00000313368;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313368;rank=1 ### Chromosome ena_gene biological_region 2881252 2881320 . + . external_name=AL123456.3:gene:2881252..2881320;logic_name=ena_gene -Chromosome ena gene 2881409 2881702 . + . ID=gene:Rv2561;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2561;logic_name=ena +Chromosome ena gene 2881409 2881702 . + . ID=gene:Rv2561;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2561;logic_name=ena Chromosome ena mRNA 2881409 2881702 . + . ID=transcript:Rv2561;Parent=gene:Rv2561;biotype=protein_coding;transcript_id=Rv2561 Chromosome ena exon 2881409 2881702 . + . Parent=transcript:Rv2561;Name=Rv2561-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2561-1;rank=1 Chromosome ena CDS 2881409 2881702 . + 0 ID=CDS:Rv2561;Parent=transcript:Rv2561;protein_id=Rv2561 ### -Chromosome ena gene 2881758 2882147 . + . ID=gene:Rv2562;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2562;logic_name=ena +Chromosome ena gene 2881758 2882147 . + . ID=gene:Rv2562;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2562;logic_name=ena Chromosome ena mRNA 2881758 2882147 . + . ID=transcript:Rv2562;Parent=gene:Rv2562;biotype=protein_coding;transcript_id=Rv2562 Chromosome ena exon 2881758 2882147 . + . Parent=transcript:Rv2562;Name=Rv2562-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2562-1;rank=1 Chromosome ena CDS 2881758 2882147 . + 0 ID=CDS:Rv2562;Parent=transcript:Rv2562;protein_id=Rv2562 @@ -13489,422 +13489,422 @@ Chromosome ena transcript 2882185 2882276 . + . ID=transcript:EBG00000313313;Par Chromosome ena exon 2882185 2882276 . + . Parent=transcript:EBG00000313313;Name=EBG00000313313;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313313;rank=1 ### Chromosome ena_gene biological_region 2882185 2882276 . + . external_name=AL123456.3:gene:2882185..2882276;logic_name=ena_gene -Chromosome ena gene 2882290 2883339 . + . ID=gene:Rv2563;biotype=protein_coding;description=Probable glutamine-transport transmembrane protein ABC transporter;gene_id=Rv2563;logic_name=ena +Chromosome ena gene 2882290 2883339 . + . ID=gene:Rv2563;biotype=protein_coding;description=Probable glutamine-transport transmembrane protein ABC transporter;gene_id=Rv2563;logic_name=ena Chromosome ena mRNA 2882290 2883339 . + . ID=transcript:Rv2563;Parent=gene:Rv2563;biotype=protein_coding;transcript_id=Rv2563 Chromosome ena exon 2882290 2883339 . + . Parent=transcript:Rv2563;Name=Rv2563-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2563-1;rank=1 Chromosome ena CDS 2882290 2883339 . + 0 ID=CDS:Rv2563;Parent=transcript:Rv2563;protein_id=Rv2563 ### -Chromosome ena gene 2883342 2884334 . + . ID=gene:Rv2564;Name=glnQ;biotype=protein_coding;description=Probable glutamine-transport ATP-binding protein ABC transporter GlnQ;gene_id=Rv2564;logic_name=ena +Chromosome ena gene 2883342 2884334 . + . ID=gene:Rv2564;Name=glnQ;biotype=protein_coding;description=Probable glutamine-transport ATP-binding protein ABC transporter GlnQ;gene_id=Rv2564;logic_name=ena Chromosome ena mRNA 2883342 2884334 . + . ID=transcript:Rv2564;Parent=gene:Rv2564;Name=glnQ-1;biotype=protein_coding;transcript_id=Rv2564 Chromosome ena exon 2883342 2884334 . + . Parent=transcript:Rv2564;Name=Rv2564-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2564-1;rank=1 Chromosome ena CDS 2883342 2884334 . + 0 ID=CDS:Rv2564;Parent=transcript:Rv2564;protein_id=Rv2564 ### -Chromosome ena gene 2884611 2886362 . + . ID=gene:Rv2565;biotype=protein_coding;description=Conserved protein;gene_id=Rv2565;logic_name=ena +Chromosome ena gene 2884611 2886362 . + . ID=gene:Rv2565;biotype=protein_coding;description=Conserved protein;gene_id=Rv2565;logic_name=ena Chromosome ena mRNA 2884611 2886362 . + . ID=transcript:Rv2565;Parent=gene:Rv2565;biotype=protein_coding;transcript_id=Rv2565 Chromosome ena exon 2884611 2886362 . + . Parent=transcript:Rv2565;Name=Rv2565-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2565-1;rank=1 Chromosome ena CDS 2884611 2886362 . + 0 ID=CDS:Rv2565;Parent=transcript:Rv2565;protein_id=Rv2565 ### -Chromosome ena gene 2886373 2889795 . + . ID=gene:Rv2566;biotype=protein_coding;description=Long conserved protein;gene_id=Rv2566;logic_name=ena +Chromosome ena gene 2886373 2889795 . + . ID=gene:Rv2566;biotype=protein_coding;description=Long conserved protein;gene_id=Rv2566;logic_name=ena Chromosome ena mRNA 2886373 2889795 . + . ID=transcript:Rv2566;Parent=gene:Rv2566;biotype=protein_coding;transcript_id=Rv2566 Chromosome ena exon 2886373 2889795 . + . Parent=transcript:Rv2566;Name=Rv2566-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2566-1;rank=1 Chromosome ena CDS 2886373 2889795 . + 0 ID=CDS:Rv2566;Parent=transcript:Rv2566;protein_id=Rv2566 ### -Chromosome ena gene 2889795 2892449 . + . ID=gene:Rv2567;biotype=protein_coding;description=Conserved hypothetical alanine and leucine rich protein;gene_id=Rv2567;logic_name=ena +Chromosome ena gene 2889795 2892449 . + . ID=gene:Rv2567;biotype=protein_coding;description=Conserved hypothetical alanine and leucine rich protein;gene_id=Rv2567;logic_name=ena Chromosome ena mRNA 2889795 2892449 . + . ID=transcript:Rv2567;Parent=gene:Rv2567;biotype=protein_coding;transcript_id=Rv2567 Chromosome ena exon 2889795 2892449 . + . Parent=transcript:Rv2567;Name=Rv2567-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2567-1;rank=1 Chromosome ena CDS 2889795 2892449 . + 0 ID=CDS:Rv2567;Parent=transcript:Rv2567;protein_id=Rv2567 ### -Chromosome ena gene 2892446 2893471 . - . ID=gene:Rv2568c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2568c;logic_name=ena +Chromosome ena gene 2892446 2893471 . - . ID=gene:Rv2568c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2568c;logic_name=ena Chromosome ena mRNA 2892446 2893471 . - . ID=transcript:Rv2568c;Parent=gene:Rv2568c;biotype=protein_coding;transcript_id=Rv2568c Chromosome ena exon 2892446 2893471 . - . Parent=transcript:Rv2568c;Name=Rv2568c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2568c-1;rank=1 Chromosome ena CDS 2892446 2893471 . - 0 ID=CDS:Rv2568c;Parent=transcript:Rv2568c;protein_id=Rv2568c ### -Chromosome ena gene 2893464 2894408 . - . ID=gene:Rv2569c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2569c;logic_name=ena +Chromosome ena gene 2893464 2894408 . - . ID=gene:Rv2569c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2569c;logic_name=ena Chromosome ena mRNA 2893464 2894408 . - . ID=transcript:Rv2569c;Parent=gene:Rv2569c;biotype=protein_coding;transcript_id=Rv2569c Chromosome ena exon 2893464 2894408 . - . Parent=transcript:Rv2569c;Name=Rv2569c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2569c-1;rank=1 Chromosome ena CDS 2893464 2894408 . - 0 ID=CDS:Rv2569c;Parent=transcript:Rv2569c;protein_id=Rv2569c ### -Chromosome ena gene 2894512 2894901 . + . ID=gene:Rv2570;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2570;logic_name=ena +Chromosome ena gene 2894512 2894901 . + . ID=gene:Rv2570;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2570;logic_name=ena Chromosome ena mRNA 2894512 2894901 . + . ID=transcript:Rv2570;Parent=gene:Rv2570;biotype=protein_coding;transcript_id=Rv2570 Chromosome ena exon 2894512 2894901 . + . Parent=transcript:Rv2570;Name=Rv2570-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2570-1;rank=1 Chromosome ena CDS 2894512 2894901 . + 0 ID=CDS:Rv2570;Parent=transcript:Rv2570;protein_id=Rv2570 ### -Chromosome ena gene 2894893 2895960 . - . ID=gene:Rv2571c;biotype=protein_coding;description=Probable transmembrane alanine and valine and leucine rich protein;gene_id=Rv2571c;logic_name=ena +Chromosome ena gene 2894893 2895960 . - . ID=gene:Rv2571c;biotype=protein_coding;description=Probable transmembrane alanine and valine and leucine rich protein;gene_id=Rv2571c;logic_name=ena Chromosome ena mRNA 2894893 2895960 . - . ID=transcript:Rv2571c;Parent=gene:Rv2571c;biotype=protein_coding;transcript_id=Rv2571c Chromosome ena exon 2894893 2895960 . - . Parent=transcript:Rv2571c;Name=Rv2571c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2571c-1;rank=1 Chromosome ena CDS 2894893 2895960 . - 0 ID=CDS:Rv2571c;Parent=transcript:Rv2571c;protein_id=Rv2571c ### -Chromosome ena gene 2896013 2897803 . - . ID=gene:Rv2572c;Name=aspS;biotype=protein_coding;description=Probable aspartyl-tRNA synthetase AspS (aspartate--tRNA ligase) (ASPRS) (aspartic acid translase);gene_id=Rv2572c;logic_name=ena +Chromosome ena gene 2896013 2897803 . - . ID=gene:Rv2572c;Name=aspS;biotype=protein_coding;description=Probable aspartyl-tRNA synthetase AspS (aspartate--tRNA ligase) (ASPRS) (aspartic acid translase);gene_id=Rv2572c;logic_name=ena Chromosome ena mRNA 2896013 2897803 . - . ID=transcript:Rv2572c;Parent=gene:Rv2572c;Name=aspS-1;biotype=protein_coding;transcript_id=Rv2572c Chromosome ena exon 2896013 2897803 . - . Parent=transcript:Rv2572c;Name=Rv2572c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2572c-1;rank=1 Chromosome ena CDS 2896013 2897803 . - 0 ID=CDS:Rv2572c;Parent=transcript:Rv2572c;protein_id=Rv2572c ### -Chromosome ena gene 2898043 2898783 . + . ID=gene:Rv2573;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2573;logic_name=ena +Chromosome ena gene 2898043 2898783 . + . ID=gene:Rv2573;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2573;logic_name=ena Chromosome ena mRNA 2898043 2898783 . + . ID=transcript:Rv2573;Parent=gene:Rv2573;biotype=protein_coding;transcript_id=Rv2573 Chromosome ena exon 2898043 2898783 . + . Parent=transcript:Rv2573;Name=Rv2573-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2573-1;rank=1 Chromosome ena CDS 2898043 2898783 . + 0 ID=CDS:Rv2573;Parent=transcript:Rv2573;protein_id=Rv2573 ### -Chromosome ena gene 2898806 2899309 . + . ID=gene:Rv2574;biotype=protein_coding;description=Conserved protein;gene_id=Rv2574;logic_name=ena +Chromosome ena gene 2898806 2899309 . + . ID=gene:Rv2574;biotype=protein_coding;description=Conserved protein;gene_id=Rv2574;logic_name=ena Chromosome ena mRNA 2898806 2899309 . + . ID=transcript:Rv2574;Parent=gene:Rv2574;biotype=protein_coding;transcript_id=Rv2574 Chromosome ena exon 2898806 2899309 . + . Parent=transcript:Rv2574;Name=Rv2574-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2574-1;rank=1 Chromosome ena CDS 2898806 2899309 . + 0 ID=CDS:Rv2574;Parent=transcript:Rv2574;protein_id=Rv2574 ### -Chromosome ena gene 2899339 2900220 . + . ID=gene:Rv2575;biotype=protein_coding;description=Possible conserved membrane glycine rich protein;gene_id=Rv2575;logic_name=ena +Chromosome ena gene 2899339 2900220 . + . ID=gene:Rv2575;biotype=protein_coding;description=Possible conserved membrane glycine rich protein;gene_id=Rv2575;logic_name=ena Chromosome ena mRNA 2899339 2900220 . + . ID=transcript:Rv2575;Parent=gene:Rv2575;biotype=protein_coding;transcript_id=Rv2575 Chromosome ena exon 2899339 2900220 . + . Parent=transcript:Rv2575;Name=Rv2575-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2575-1;rank=1 Chromosome ena CDS 2899339 2900220 . + 0 ID=CDS:Rv2575;Parent=transcript:Rv2575;protein_id=Rv2575 ### -Chromosome ena gene 2900226 2900690 . - . ID=gene:Rv2576c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2576c;logic_name=ena +Chromosome ena gene 2900226 2900690 . - . ID=gene:Rv2576c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2576c;logic_name=ena Chromosome ena mRNA 2900226 2900690 . - . ID=transcript:Rv2576c;Parent=gene:Rv2576c;biotype=protein_coding;transcript_id=Rv2576c Chromosome ena exon 2900226 2900690 . - . Parent=transcript:Rv2576c;Name=Rv2576c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2576c-1;rank=1 Chromosome ena CDS 2900226 2900690 . - 0 ID=CDS:Rv2576c;Parent=transcript:Rv2576c;protein_id=Rv2576c ### -Chromosome ena gene 2900918 2902507 . + . ID=gene:Rv2577;biotype=protein_coding;description=Conserved protein;gene_id=Rv2577;logic_name=ena +Chromosome ena gene 2900918 2902507 . + . ID=gene:Rv2577;biotype=protein_coding;description=Conserved protein;gene_id=Rv2577;logic_name=ena Chromosome ena mRNA 2900918 2902507 . + . ID=transcript:Rv2577;Parent=gene:Rv2577;biotype=protein_coding;transcript_id=Rv2577 Chromosome ena exon 2900918 2902507 . + . Parent=transcript:Rv2577;Name=Rv2577-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2577-1;rank=1 Chromosome ena CDS 2900918 2902507 . + 0 ID=CDS:Rv2577;Parent=transcript:Rv2577;protein_id=Rv2577 ### -Chromosome ena gene 2902509 2903531 . - . ID=gene:Rv2578c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2578c;logic_name=ena +Chromosome ena gene 2902509 2903531 . - . ID=gene:Rv2578c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2578c;logic_name=ena Chromosome ena mRNA 2902509 2903531 . - . ID=transcript:Rv2578c;Parent=gene:Rv2578c;biotype=protein_coding;transcript_id=Rv2578c Chromosome ena exon 2902509 2903531 . - . Parent=transcript:Rv2578c;Name=Rv2578c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2578c-1;rank=1 Chromosome ena CDS 2902509 2903531 . - 0 ID=CDS:Rv2578c;Parent=transcript:Rv2578c;protein_id=Rv2578c ### -Chromosome ena gene 2903639 2904541 . + . ID=gene:Rv2579;Name=dhaA;biotype=protein_coding;description=Possible haloalkane dehalogenase DhaA (1-chlorohexane halidohydrolase);gene_id=Rv2579;logic_name=ena +Chromosome ena gene 2903639 2904541 . + . ID=gene:Rv2579;Name=dhaA;biotype=protein_coding;description=Possible haloalkane dehalogenase DhaA (1-chlorohexane halidohydrolase);gene_id=Rv2579;logic_name=ena Chromosome ena mRNA 2903639 2904541 . + . ID=transcript:Rv2579;Parent=gene:Rv2579;Name=dhaA-1;biotype=protein_coding;transcript_id=Rv2579 Chromosome ena exon 2903639 2904541 . + . Parent=transcript:Rv2579;Name=Rv2579-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2579-1;rank=1 Chromosome ena CDS 2903639 2904541 . + 0 ID=CDS:Rv2579;Parent=transcript:Rv2579;protein_id=Rv2579 ### -Chromosome ena gene 2904821 2906092 . - . ID=gene:Rv2580c;Name=hisS;biotype=protein_coding;description=Probable histidyl-tRNA synthetase HisS (histidine--tRNA ligase) (HISRS) (histidine--translase);gene_id=Rv2580c;logic_name=ena +Chromosome ena gene 2904821 2906092 . - . ID=gene:Rv2580c;Name=hisS;biotype=protein_coding;description=Probable histidyl-tRNA synthetase HisS (histidine--tRNA ligase) (HISRS) (histidine--translase);gene_id=Rv2580c;logic_name=ena Chromosome ena mRNA 2904821 2906092 . - . ID=transcript:Rv2580c;Parent=gene:Rv2580c;Name=hisS-1;biotype=protein_coding;transcript_id=Rv2580c Chromosome ena exon 2904821 2906092 . - . Parent=transcript:Rv2580c;Name=Rv2580c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2580c-1;rank=1 Chromosome ena CDS 2904821 2906092 . - 0 ID=CDS:Rv2580c;Parent=transcript:Rv2580c;protein_id=Rv2580c ### -Chromosome ena gene 2906089 2906763 . - . ID=gene:Rv2581c;biotype=protein_coding;description=Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II);gene_id=Rv2581c;logic_name=ena +Chromosome ena gene 2906089 2906763 . - . ID=gene:Rv2581c;biotype=protein_coding;description=Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II);gene_id=Rv2581c;logic_name=ena Chromosome ena mRNA 2906089 2906763 . - . ID=transcript:Rv2581c;Parent=gene:Rv2581c;biotype=protein_coding;transcript_id=Rv2581c Chromosome ena exon 2906089 2906763 . - . Parent=transcript:Rv2581c;Name=Rv2581c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2581c-1;rank=1 Chromosome ena CDS 2906089 2906763 . - 0 ID=CDS:Rv2581c;Parent=transcript:Rv2581c;protein_id=Rv2581c ### -Chromosome ena gene 2906814 2907740 . + . ID=gene:Rv2582;Name=ppiB;biotype=protein_coding;description=Probable peptidyl-prolyl cis-trans isomerase B PpiB (cyclophilin) (PPIase) (rotamase) (peptidylprolyl isomerase);gene_id=Rv2582;logic_name=ena +Chromosome ena gene 2906814 2907740 . + . ID=gene:Rv2582;Name=ppiB;biotype=protein_coding;description=Probable peptidyl-prolyl cis-trans isomerase B PpiB (cyclophilin) (PPIase) (rotamase) (peptidylprolyl isomerase);gene_id=Rv2582;logic_name=ena Chromosome ena mRNA 2906814 2907740 . + . ID=transcript:Rv2582;Parent=gene:Rv2582;Name=ppiB-1;biotype=protein_coding;transcript_id=Rv2582 Chromosome ena exon 2906814 2907740 . + . Parent=transcript:Rv2582;Name=Rv2582-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2582-1;rank=1 Chromosome ena CDS 2906814 2907740 . + 0 ID=CDS:Rv2582;Parent=transcript:Rv2582;protein_id=Rv2582 ### -Chromosome ena gene 2907826 2910198 . - . ID=gene:Rv2583c;Name=relA;biotype=protein_coding;description=Probable GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase);gene_id=Rv2583c;logic_name=ena +Chromosome ena gene 2907826 2910198 . - . ID=gene:Rv2583c;Name=relA;biotype=protein_coding;description=Probable GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase);gene_id=Rv2583c;logic_name=ena Chromosome ena mRNA 2907826 2910198 . - . ID=transcript:Rv2583c;Parent=gene:Rv2583c;Name=relA-1;biotype=protein_coding;transcript_id=Rv2583c Chromosome ena exon 2907826 2910198 . - . Parent=transcript:Rv2583c;Name=Rv2583c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2583c-1;rank=1 Chromosome ena CDS 2907826 2910198 . - 0 ID=CDS:Rv2583c;Parent=transcript:Rv2583c;protein_id=Rv2583c ### -Chromosome ena gene 2910229 2910900 . - . ID=gene:Rv2584c;Name=apt;biotype=protein_coding;description=Adenine phosphoribosyltransferase Apt (APRT) (AMP diphosphorylase) (AMP pyrophosphorylase) (transphosphoribosidase);gene_id=Rv2584c;logic_name=ena +Chromosome ena gene 2910229 2910900 . - . ID=gene:Rv2584c;Name=apt;biotype=protein_coding;description=Adenine phosphoribosyltransferase Apt (APRT) (AMP diphosphorylase) (AMP pyrophosphorylase) (transphosphoribosidase);gene_id=Rv2584c;logic_name=ena Chromosome ena mRNA 2910229 2910900 . - . ID=transcript:Rv2584c;Parent=gene:Rv2584c;Name=apt-1;biotype=protein_coding;transcript_id=Rv2584c Chromosome ena exon 2910229 2910900 . - . Parent=transcript:Rv2584c;Name=Rv2584c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2584c-1;rank=1 Chromosome ena CDS 2910229 2910900 . - 0 ID=CDS:Rv2584c;Parent=transcript:Rv2584c;protein_id=Rv2584c ### -Chromosome ena gene 2911004 2912677 . - . ID=gene:Rv2585c;biotype=protein_coding;description=Possible conserved lipoprotein;gene_id=Rv2585c;logic_name=ena +Chromosome ena gene 2911004 2912677 . - . ID=gene:Rv2585c;biotype=protein_coding;description=Possible conserved lipoprotein;gene_id=Rv2585c;logic_name=ena Chromosome ena mRNA 2911004 2912677 . - . ID=transcript:Rv2585c;Parent=gene:Rv2585c;biotype=protein_coding;transcript_id=Rv2585c Chromosome ena exon 2911004 2912677 . - . Parent=transcript:Rv2585c;Name=Rv2585c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2585c-1;rank=1 Chromosome ena CDS 2911004 2912677 . - 0 ID=CDS:Rv2585c;Parent=transcript:Rv2585c;protein_id=Rv2585c ### -Chromosome ena gene 2912683 2914011 . - . ID=gene:Rv2586c;Name=secF;biotype=protein_coding;description=Probable protein-export membrane protein SecF;gene_id=Rv2586c;logic_name=ena +Chromosome ena gene 2912683 2914011 . - . ID=gene:Rv2586c;Name=secF;biotype=protein_coding;description=Probable protein-export membrane protein SecF;gene_id=Rv2586c;logic_name=ena Chromosome ena mRNA 2912683 2914011 . - . ID=transcript:Rv2586c;Parent=gene:Rv2586c;Name=secF-1;biotype=protein_coding;transcript_id=Rv2586c Chromosome ena exon 2912683 2914011 . - . Parent=transcript:Rv2586c;Name=Rv2586c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2586c-1;rank=1 Chromosome ena CDS 2912683 2914011 . - 0 ID=CDS:Rv2586c;Parent=transcript:Rv2586c;protein_id=Rv2586c ### -Chromosome ena gene 2914015 2915736 . - . ID=gene:Rv2587c;Name=secD;biotype=protein_coding;description=Probable protein-export membrane protein SecD;gene_id=Rv2587c;logic_name=ena +Chromosome ena gene 2914015 2915736 . - . ID=gene:Rv2587c;Name=secD;biotype=protein_coding;description=Probable protein-export membrane protein SecD;gene_id=Rv2587c;logic_name=ena Chromosome ena mRNA 2914015 2915736 . - . ID=transcript:Rv2587c;Parent=gene:Rv2587c;Name=secD-1;biotype=protein_coding;transcript_id=Rv2587c Chromosome ena exon 2914015 2915736 . - . Parent=transcript:Rv2587c;Name=Rv2587c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2587c-1;rank=1 Chromosome ena CDS 2914015 2915736 . - 0 ID=CDS:Rv2587c;Parent=transcript:Rv2587c;protein_id=Rv2587c ### -Chromosome ena gene 2915846 2916193 . - . ID=gene:Rv2588c;Name=yajC;biotype=protein_coding;description=Probable conserved membrane protein secretion factor YajC;gene_id=Rv2588c;logic_name=ena +Chromosome ena gene 2915846 2916193 . - . ID=gene:Rv2588c;Name=yajC;biotype=protein_coding;description=Probable conserved membrane protein secretion factor YajC;gene_id=Rv2588c;logic_name=ena Chromosome ena mRNA 2915846 2916193 . - . ID=transcript:Rv2588c;Parent=gene:Rv2588c;Name=yajC-1;biotype=protein_coding;transcript_id=Rv2588c Chromosome ena exon 2915846 2916193 . - . Parent=transcript:Rv2588c;Name=Rv2588c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2588c-1;rank=1 Chromosome ena CDS 2915846 2916193 . - 0 ID=CDS:Rv2588c;Parent=transcript:Rv2588c;protein_id=Rv2588c ### -Chromosome ena gene 2916360 2917709 . + . ID=gene:Rv2589;Name=gabT;biotype=protein_coding;description=4-aminobutyrate aminotransferase GabT (gamma-amino-N-butyrate transaminase) (GABA transaminase) (glutamate:succinic semialdehyde transaminase) (GABA aminotransferase) (GABA-at);gene_id=Rv2589;logic_name=ena +Chromosome ena gene 2916360 2917709 . + . ID=gene:Rv2589;Name=gabT;biotype=protein_coding;description=4-aminobutyrate aminotransferase GabT (gamma-amino-N-butyrate transaminase) (GABA transaminase) (glutamate:succinic semialdehyde transaminase) (GABA aminotransferase) (GABA-at);gene_id=Rv2589;logic_name=ena Chromosome ena mRNA 2916360 2917709 . + . ID=transcript:Rv2589;Parent=gene:Rv2589;Name=gabT-1;biotype=protein_coding;transcript_id=Rv2589 Chromosome ena exon 2916360 2917709 . + . Parent=transcript:Rv2589;Name=Rv2589-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2589-1;rank=1 Chromosome ena CDS 2916360 2917709 . + 0 ID=CDS:Rv2589;Parent=transcript:Rv2589;protein_id=Rv2589 ### -Chromosome ena gene 2917871 2921377 . + . ID=gene:Rv2590;Name=fadD9;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD9 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2590;logic_name=ena +Chromosome ena gene 2917871 2921377 . + . ID=gene:Rv2590;Name=fadD9;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD9 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv2590;logic_name=ena Chromosome ena mRNA 2917871 2921377 . + . ID=transcript:Rv2590;Parent=gene:Rv2590;Name=fadD9-1;biotype=protein_coding;transcript_id=Rv2590 Chromosome ena exon 2917871 2921377 . + . Parent=transcript:Rv2590;Name=Rv2590-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2590-1;rank=1 Chromosome ena CDS 2917871 2921377 . + 0 ID=CDS:Rv2590;Parent=transcript:Rv2590;protein_id=Rv2590 ### -Chromosome ena gene 2921551 2923182 . + . ID=gene:Rv2591;Name=PE_PGRS44;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS44;gene_id=Rv2591;logic_name=ena +Chromosome ena gene 2921551 2923182 . + . ID=gene:Rv2591;Name=PE_PGRS44;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS44;gene_id=Rv2591;logic_name=ena Chromosome ena mRNA 2921551 2923182 . + . ID=transcript:Rv2591;Parent=gene:Rv2591;Name=PE_PGRS44-1;biotype=protein_coding;transcript_id=Rv2591 Chromosome ena exon 2921551 2923182 . + . Parent=transcript:Rv2591;Name=Rv2591-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2591-1;rank=1 Chromosome ena CDS 2921551 2923182 . + 0 ID=CDS:Rv2591;Parent=transcript:Rv2591;protein_id=Rv2591 ### -Chromosome ena gene 2923199 2924233 . - . ID=gene:Rv2592c;Name=ruvB;biotype=protein_coding;description=Probable holliday junction DNA helicase RuvB;gene_id=Rv2592c;logic_name=ena +Chromosome ena gene 2923199 2924233 . - . ID=gene:Rv2592c;Name=ruvB;biotype=protein_coding;description=Probable holliday junction DNA helicase RuvB;gene_id=Rv2592c;logic_name=ena Chromosome ena mRNA 2923199 2924233 . - . ID=transcript:Rv2592c;Parent=gene:Rv2592c;Name=ruvB-1;biotype=protein_coding;transcript_id=Rv2592c Chromosome ena exon 2923199 2924233 . - . Parent=transcript:Rv2592c;Name=Rv2592c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2592c-1;rank=1 Chromosome ena CDS 2923199 2924233 . - 0 ID=CDS:Rv2592c;Parent=transcript:Rv2592c;protein_id=Rv2592c ### -Chromosome ena gene 2924230 2924820 . - . ID=gene:Rv2593c;Name=ruvA;biotype=protein_coding;description=Probable holliday junction DNA helicase RuvA;gene_id=Rv2593c;logic_name=ena +Chromosome ena gene 2924230 2924820 . - . ID=gene:Rv2593c;Name=ruvA;biotype=protein_coding;description=Probable holliday junction DNA helicase RuvA;gene_id=Rv2593c;logic_name=ena Chromosome ena mRNA 2924230 2924820 . - . ID=transcript:Rv2593c;Parent=gene:Rv2593c;Name=ruvA-1;biotype=protein_coding;transcript_id=Rv2593c Chromosome ena exon 2924230 2924820 . - . Parent=transcript:Rv2593c;Name=Rv2593c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2593c-1;rank=1 Chromosome ena CDS 2924230 2924820 . - 0 ID=CDS:Rv2593c;Parent=transcript:Rv2593c;protein_id=Rv2593c ### -Chromosome ena gene 2924817 2925383 . - . ID=gene:Rv2594c;Name=ruvC;biotype=protein_coding;description=Probable crossover junction endodeoxyribonuclease RuvC (holliday junction nuclease) (holliday junction resolvase);gene_id=Rv2594c;logic_name=ena +Chromosome ena gene 2924817 2925383 . - . ID=gene:Rv2594c;Name=ruvC;biotype=protein_coding;description=Probable crossover junction endodeoxyribonuclease RuvC (holliday junction nuclease) (holliday junction resolvase);gene_id=Rv2594c;logic_name=ena Chromosome ena mRNA 2924817 2925383 . - . ID=transcript:Rv2594c;Parent=gene:Rv2594c;Name=ruvC-1;biotype=protein_coding;transcript_id=Rv2594c Chromosome ena exon 2924817 2925383 . - . Parent=transcript:Rv2594c;Name=Rv2594c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2594c-1;rank=1 Chromosome ena CDS 2924817 2925383 . - 0 ID=CDS:Rv2594c;Parent=transcript:Rv2594c;protein_id=Rv2594c ### -Chromosome ena gene 2925492 2925737 . + . ID=gene:Rv2595;Name=vapB40;biotype=protein_coding;description=Possible antitoxin VapB40;gene_id=Rv2595;logic_name=ena +Chromosome ena gene 2925492 2925737 . + . ID=gene:Rv2595;Name=vapB40;biotype=protein_coding;description=Possible antitoxin VapB40;gene_id=Rv2595;logic_name=ena Chromosome ena mRNA 2925492 2925737 . + . ID=transcript:Rv2595;Parent=gene:Rv2595;Name=vapB40-1;biotype=protein_coding;transcript_id=Rv2595 Chromosome ena exon 2925492 2925737 . + . Parent=transcript:Rv2595;Name=Rv2595-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2595-1;rank=1 Chromosome ena CDS 2925492 2925737 . + 0 ID=CDS:Rv2595;Parent=transcript:Rv2595;protein_id=Rv2595 ### -Chromosome ena gene 2925734 2926138 . + . ID=gene:Rv2596;Name=vapC40;biotype=protein_coding;description=Possible toxin VapC40. Contains PIN domain.;gene_id=Rv2596;logic_name=ena +Chromosome ena gene 2925734 2926138 . + . ID=gene:Rv2596;Name=vapC40;biotype=protein_coding;description=Possible toxin VapC40. Contains PIN domain.;gene_id=Rv2596;logic_name=ena Chromosome ena mRNA 2925734 2926138 . + . ID=transcript:Rv2596;Parent=gene:Rv2596;Name=vapC40-1;biotype=protein_coding;transcript_id=Rv2596 Chromosome ena exon 2925734 2926138 . + . Parent=transcript:Rv2596;Name=Rv2596-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2596-1;rank=1 Chromosome ena CDS 2925734 2926138 . + 0 ID=CDS:Rv2596;Parent=transcript:Rv2596;protein_id=Rv2596 ### -Chromosome ena gene 2926355 2926975 . + . ID=gene:Rv2597;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2597;logic_name=ena +Chromosome ena gene 2926355 2926975 . + . ID=gene:Rv2597;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2597;logic_name=ena Chromosome ena mRNA 2926355 2926975 . + . ID=transcript:Rv2597;Parent=gene:Rv2597;biotype=protein_coding;transcript_id=Rv2597 Chromosome ena exon 2926355 2926975 . + . Parent=transcript:Rv2597;Name=Rv2597-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2597-1;rank=1 Chromosome ena CDS 2926355 2926975 . + 0 ID=CDS:Rv2597;Parent=transcript:Rv2597;protein_id=Rv2597 ### -Chromosome ena gene 2926986 2927480 . + . ID=gene:Rv2598;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2598;logic_name=ena +Chromosome ena gene 2926986 2927480 . + . ID=gene:Rv2598;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2598;logic_name=ena Chromosome ena mRNA 2926986 2927480 . + . ID=transcript:Rv2598;Parent=gene:Rv2598;biotype=protein_coding;transcript_id=Rv2598 Chromosome ena exon 2926986 2927480 . + . Parent=transcript:Rv2598;Name=Rv2598-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2598-1;rank=1 Chromosome ena CDS 2926986 2927480 . + 0 ID=CDS:Rv2598;Parent=transcript:Rv2598;protein_id=Rv2598 ### -Chromosome ena gene 2927477 2927908 . + . ID=gene:Rv2599;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2599;logic_name=ena +Chromosome ena gene 2927477 2927908 . + . ID=gene:Rv2599;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2599;logic_name=ena Chromosome ena mRNA 2927477 2927908 . + . ID=transcript:Rv2599;Parent=gene:Rv2599;biotype=protein_coding;transcript_id=Rv2599 Chromosome ena exon 2927477 2927908 . + . Parent=transcript:Rv2599;Name=Rv2599-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2599-1;rank=1 Chromosome ena CDS 2927477 2927908 . + 0 ID=CDS:Rv2599;Parent=transcript:Rv2599;protein_id=Rv2599 ### -Chromosome ena gene 2927990 2928391 . + . ID=gene:Rv2600;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2600;logic_name=ena +Chromosome ena gene 2927990 2928391 . + . ID=gene:Rv2600;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2600;logic_name=ena Chromosome ena mRNA 2927990 2928391 . + . ID=transcript:Rv2600;Parent=gene:Rv2600;biotype=protein_coding;transcript_id=Rv2600 Chromosome ena exon 2927990 2928391 . + . Parent=transcript:Rv2600;Name=Rv2600-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2600-1;rank=1 Chromosome ena CDS 2927990 2928391 . + 0 ID=CDS:Rv2600;Parent=transcript:Rv2600;protein_id=Rv2600 ### -Chromosome ena gene 2928388 2929959 . + . ID=gene:Rv2601;Name=speE;biotype=protein_coding;description=Probable spermidine synthase SpeE (putrescine aminopropyltransferase) (aminopropyltransferase) (SPDSY);gene_id=Rv2601;logic_name=ena +Chromosome ena gene 2928388 2929959 . + . ID=gene:Rv2601;Name=speE;biotype=protein_coding;description=Probable spermidine synthase SpeE (putrescine aminopropyltransferase) (aminopropyltransferase) (SPDSY);gene_id=Rv2601;logic_name=ena Chromosome ena mRNA 2928388 2929959 . + . ID=transcript:Rv2601;Parent=gene:Rv2601;Name=speE-1;biotype=protein_coding;transcript_id=Rv2601 Chromosome ena exon 2928388 2929959 . + . Parent=transcript:Rv2601;Name=Rv2601-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2601-1;rank=1 Chromosome ena CDS 2928388 2929959 . + 0 ID=CDS:Rv2601;Parent=transcript:Rv2601;protein_id=Rv2601 ### -Chromosome ena gene 2930070 2930357 . + . ID=gene:Rv2601A;Name=vapB41;biotype=protein_coding;description=Possible antitoxin VapB41;gene_id=Rv2601A;logic_name=ena +Chromosome ena gene 2930070 2930357 . + . ID=gene:Rv2601A;Name=vapB41;biotype=protein_coding;description=Possible antitoxin VapB41;gene_id=Rv2601A;logic_name=ena Chromosome ena mRNA 2930070 2930357 . + . ID=transcript:Rv2601A;Parent=gene:Rv2601A;Name=vapB41-1;biotype=protein_coding;transcript_id=Rv2601A Chromosome ena exon 2930070 2930357 . + . Parent=transcript:Rv2601A;Name=Rv2601A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2601A-1;rank=1 Chromosome ena CDS 2930070 2930357 . + 0 ID=CDS:Rv2601A;Parent=transcript:Rv2601A;protein_id=Rv2601A ### -Chromosome ena gene 2930344 2930784 . + . ID=gene:Rv2602;Name=vapC41;biotype=protein_coding;description=Possible toxin VapC41. Contains PIN domain.;gene_id=Rv2602;logic_name=ena +Chromosome ena gene 2930344 2930784 . + . ID=gene:Rv2602;Name=vapC41;biotype=protein_coding;description=Possible toxin VapC41. Contains PIN domain.;gene_id=Rv2602;logic_name=ena Chromosome ena mRNA 2930344 2930784 . + . ID=transcript:Rv2602;Parent=gene:Rv2602;Name=vapC41-1;biotype=protein_coding;transcript_id=Rv2602 Chromosome ena exon 2930344 2930784 . + . Parent=transcript:Rv2602;Name=Rv2602-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2602-1;rank=1 Chromosome ena CDS 2930344 2930784 . + 0 ID=CDS:Rv2602;Parent=transcript:Rv2602;protein_id=Rv2602 ### -Chromosome ena gene 2930805 2931560 . - . ID=gene:Rv2603c;biotype=protein_coding;description=Highly conserved protein;gene_id=Rv2603c;logic_name=ena +Chromosome ena gene 2930805 2931560 . - . ID=gene:Rv2603c;biotype=protein_coding;description=Highly conserved protein;gene_id=Rv2603c;logic_name=ena Chromosome ena mRNA 2930805 2931560 . - . ID=transcript:Rv2603c;Parent=gene:Rv2603c;biotype=protein_coding;transcript_id=Rv2603c Chromosome ena exon 2930805 2931560 . - . Parent=transcript:Rv2603c;Name=Rv2603c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2603c-1;rank=1 Chromosome ena CDS 2930805 2931560 . - 0 ID=CDS:Rv2603c;Parent=transcript:Rv2603c;protein_id=Rv2603c ### -Chromosome ena gene 2931693 2932289 . - . ID=gene:Rv2604c;Name=snoP;biotype=protein_coding;description=Probable glutamine amidotransferase SnoP;gene_id=Rv2604c;logic_name=ena +Chromosome ena gene 2931693 2932289 . - . ID=gene:Rv2604c;Name=snoP;biotype=protein_coding;description=Probable glutamine amidotransferase SnoP;gene_id=Rv2604c;logic_name=ena Chromosome ena mRNA 2931693 2932289 . - . ID=transcript:Rv2604c;Parent=gene:Rv2604c;Name=snoP-1;biotype=protein_coding;transcript_id=Rv2604c Chromosome ena exon 2931693 2932289 . - . Parent=transcript:Rv2604c;Name=Rv2604c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2604c-1;rank=1 Chromosome ena CDS 2931693 2932289 . - 0 ID=CDS:Rv2604c;Parent=transcript:Rv2604c;protein_id=Rv2604c ### -Chromosome ena gene 2932297 2933142 . - . ID=gene:Rv2605c;Name=tesB2;biotype=protein_coding;description=Probable acyl-CoA thioesterase II TesB2 (TEII);gene_id=Rv2605c;logic_name=ena +Chromosome ena gene 2932297 2933142 . - . ID=gene:Rv2605c;Name=tesB2;biotype=protein_coding;description=Probable acyl-CoA thioesterase II TesB2 (TEII);gene_id=Rv2605c;logic_name=ena Chromosome ena mRNA 2932297 2933142 . - . ID=transcript:Rv2605c;Parent=gene:Rv2605c;Name=tesB2-1;biotype=protein_coding;transcript_id=Rv2605c Chromosome ena exon 2932297 2933142 . - . Parent=transcript:Rv2605c;Name=Rv2605c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2605c-1;rank=1 Chromosome ena CDS 2932297 2933142 . - 0 ID=CDS:Rv2605c;Parent=transcript:Rv2605c;protein_id=Rv2605c ### -Chromosome ena gene 2933171 2934070 . - . ID=gene:Rv2606c;Name=snzP;biotype=protein_coding;description=Possible pyridoxine biosynthesis protein SnzP;gene_id=Rv2606c;logic_name=ena +Chromosome ena gene 2933171 2934070 . - . ID=gene:Rv2606c;Name=snzP;biotype=protein_coding;description=Possible pyridoxine biosynthesis protein SnzP;gene_id=Rv2606c;logic_name=ena Chromosome ena mRNA 2933171 2934070 . - . ID=transcript:Rv2606c;Parent=gene:Rv2606c;Name=snzP-1;biotype=protein_coding;transcript_id=Rv2606c Chromosome ena exon 2933171 2934070 . - . Parent=transcript:Rv2606c;Name=Rv2606c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2606c-1;rank=1 Chromosome ena CDS 2933171 2934070 . - 0 ID=CDS:Rv2606c;Parent=transcript:Rv2606c;protein_id=Rv2606c ### -Chromosome ena gene 2934198 2934872 . + . ID=gene:Rv2607;Name=pdxH;biotype=protein_coding;description=Probable pyridoxamine 5'-phosphate oxidase PdxH (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv2607;logic_name=ena +Chromosome ena gene 2934198 2934872 . + . ID=gene:Rv2607;Name=pdxH;biotype=protein_coding;description=Probable pyridoxamine 5'-phosphate oxidase PdxH (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase);gene_id=Rv2607;logic_name=ena Chromosome ena mRNA 2934198 2934872 . + . ID=transcript:Rv2607;Parent=gene:Rv2607;Name=pdxH-1;biotype=protein_coding;transcript_id=Rv2607 Chromosome ena exon 2934198 2934872 . + . Parent=transcript:Rv2607;Name=Rv2607-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2607-1;rank=1 Chromosome ena CDS 2934198 2934872 . + 0 ID=CDS:Rv2607;Parent=transcript:Rv2607;protein_id=Rv2607 ### -Chromosome ena gene 2935046 2936788 . + . ID=gene:Rv2608;Name=PPE42;biotype=protein_coding;description=PPE family protein PPE42;gene_id=Rv2608;logic_name=ena +Chromosome ena gene 2935046 2936788 . + . ID=gene:Rv2608;Name=PPE42;biotype=protein_coding;description=PPE family protein PPE42;gene_id=Rv2608;logic_name=ena Chromosome ena mRNA 2935046 2936788 . + . ID=transcript:Rv2608;Parent=gene:Rv2608;Name=PPE42-1;biotype=protein_coding;transcript_id=Rv2608 Chromosome ena exon 2935046 2936788 . + . Parent=transcript:Rv2608;Name=Rv2608-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2608-1;rank=1 Chromosome ena CDS 2935046 2936788 . + 0 ID=CDS:Rv2608;Parent=transcript:Rv2608;protein_id=Rv2608 ### -Chromosome ena gene 2936810 2937865 . - . ID=gene:Rv2609c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2609c;logic_name=ena +Chromosome ena gene 2936810 2937865 . - . ID=gene:Rv2609c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv2609c;logic_name=ena Chromosome ena mRNA 2936810 2937865 . - . ID=transcript:Rv2609c;Parent=gene:Rv2609c;biotype=protein_coding;transcript_id=Rv2609c Chromosome ena exon 2936810 2937865 . - . Parent=transcript:Rv2609c;Name=Rv2609c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2609c-1;rank=1 Chromosome ena CDS 2936810 2937865 . - 0 ID=CDS:Rv2609c;Parent=transcript:Rv2609c;protein_id=Rv2609c ### -Chromosome ena gene 2937865 2939001 . - . ID=gene:Rv2610c;Name=pimA;biotype=protein_coding;description=Alpha-mannosyltransferase PimA;gene_id=Rv2610c;logic_name=ena +Chromosome ena gene 2937865 2939001 . - . ID=gene:Rv2610c;Name=pimA;biotype=protein_coding;description=Alpha-mannosyltransferase PimA;gene_id=Rv2610c;logic_name=ena Chromosome ena mRNA 2937865 2939001 . - . ID=transcript:Rv2610c;Parent=gene:Rv2610c;Name=pimA-1;biotype=protein_coding;transcript_id=Rv2610c Chromosome ena exon 2937865 2939001 . - . Parent=transcript:Rv2610c;Name=Rv2610c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2610c-1;rank=1 Chromosome ena CDS 2937865 2939001 . - 0 ID=CDS:Rv2610c;Parent=transcript:Rv2610c;protein_id=Rv2610c ### -Chromosome ena gene 2939012 2939962 . - . ID=gene:Rv2611c;biotype=protein_coding;description=Probable acyltransferase;gene_id=Rv2611c;logic_name=ena +Chromosome ena gene 2939012 2939962 . - . ID=gene:Rv2611c;biotype=protein_coding;description=Probable acyltransferase;gene_id=Rv2611c;logic_name=ena Chromosome ena mRNA 2939012 2939962 . - . ID=transcript:Rv2611c;Parent=gene:Rv2611c;biotype=protein_coding;transcript_id=Rv2611c Chromosome ena exon 2939012 2939962 . - . Parent=transcript:Rv2611c;Name=Rv2611c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2611c-1;rank=1 Chromosome ena CDS 2939012 2939962 . - 0 ID=CDS:Rv2611c;Parent=transcript:Rv2611c;protein_id=Rv2611c ### -Chromosome ena gene 2939959 2940612 . - . ID=gene:Rv2612c;Name=pgsA1;biotype=protein_coding;description=PI synthase PgsA1 (phosphatidylinositol synthase) (CDP-diacylglycerol--inositol-3-phosphatidyltransferase);gene_id=Rv2612c;logic_name=ena +Chromosome ena gene 2939959 2940612 . - . ID=gene:Rv2612c;Name=pgsA1;biotype=protein_coding;description=PI synthase PgsA1 (phosphatidylinositol synthase) (CDP-diacylglycerol--inositol-3-phosphatidyltransferase);gene_id=Rv2612c;logic_name=ena Chromosome ena mRNA 2939959 2940612 . - . ID=transcript:Rv2612c;Parent=gene:Rv2612c;Name=pgsA1-1;biotype=protein_coding;transcript_id=Rv2612c Chromosome ena exon 2939959 2940612 . - . Parent=transcript:Rv2612c;Name=Rv2612c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2612c-1;rank=1 Chromosome ena CDS 2939959 2940612 . - 0 ID=CDS:Rv2612c;Parent=transcript:Rv2612c;protein_id=Rv2612c ### -Chromosome ena gene 2940609 2941196 . - . ID=gene:Rv2613c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2613c;logic_name=ena +Chromosome ena gene 2940609 2941196 . - . ID=gene:Rv2613c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2613c;logic_name=ena Chromosome ena mRNA 2940609 2941196 . - . ID=transcript:Rv2613c;Parent=gene:Rv2613c;biotype=protein_coding;transcript_id=Rv2613c Chromosome ena exon 2940609 2941196 . - . Parent=transcript:Rv2613c;Name=Rv2613c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2613c-1;rank=1 Chromosome ena CDS 2940609 2941196 . - 0 ID=CDS:Rv2613c;Parent=transcript:Rv2613c;protein_id=Rv2613c ### -Chromosome ena gene 2941189 2943267 . - . ID=gene:Rv2614c;Name=thrS;biotype=protein_coding;description=Probable threonyl-tRNA synthetase ThrS (threonine-tRNA synthetase)(ThrRS) (threonine-tRNA ligase);gene_id=Rv2614c;logic_name=ena +Chromosome ena gene 2941189 2943267 . - . ID=gene:Rv2614c;Name=thrS;biotype=protein_coding;description=Probable threonyl-tRNA synthetase ThrS (threonine-tRNA synthetase)(ThrRS) (threonine-tRNA ligase);gene_id=Rv2614c;logic_name=ena Chromosome ena mRNA 2941189 2943267 . - . ID=transcript:Rv2614c;Parent=gene:Rv2614c;Name=thrS-1;biotype=protein_coding;transcript_id=Rv2614c Chromosome ena exon 2941189 2943267 . - . Parent=transcript:Rv2614c;Name=Rv2614c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2614c-1;rank=1 Chromosome ena CDS 2941189 2943267 . - 0 ID=CDS:Rv2614c;Parent=transcript:Rv2614c;protein_id=Rv2614c ### -Chromosome ena gene 2943376 2943603 . + . ID=gene:Rv2614A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2614A;logic_name=ena +Chromosome ena gene 2943376 2943603 . + . ID=gene:Rv2614A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2614A;logic_name=ena Chromosome ena mRNA 2943376 2943603 . + . ID=transcript:Rv2614A;Parent=gene:Rv2614A;biotype=protein_coding;transcript_id=Rv2614A Chromosome ena exon 2943376 2943603 . + . Parent=transcript:Rv2614A;Name=Rv2614A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2614A-1;rank=1 Chromosome ena CDS 2943376 2943603 . + 0 ID=CDS:Rv2614A;Parent=transcript:Rv2614A;protein_id=Rv2614A ### -Chromosome ena gene 2943600 2944985 . - . ID=gene:Rv2615c;Name=PE_PGRS45;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS45;gene_id=Rv2615c;logic_name=ena +Chromosome ena gene 2943600 2944985 . - . ID=gene:Rv2615c;Name=PE_PGRS45;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS45;gene_id=Rv2615c;logic_name=ena Chromosome ena mRNA 2943600 2944985 . - . ID=transcript:Rv2615c;Parent=gene:Rv2615c;Name=PE_PGRS45-1;biotype=protein_coding;transcript_id=Rv2615c Chromosome ena exon 2943600 2944985 . - . Parent=transcript:Rv2615c;Name=Rv2615c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2615c-1;rank=1 Chromosome ena CDS 2943600 2944985 . - 0 ID=CDS:Rv2615c;Parent=transcript:Rv2615c;protein_id=Rv2615c ### -Chromosome ena gene 2945330 2945830 . + . ID=gene:Rv2616;biotype=protein_coding;description=Conserved protein;gene_id=Rv2616;logic_name=ena +Chromosome ena gene 2945330 2945830 . + . ID=gene:Rv2616;biotype=protein_coding;description=Conserved protein;gene_id=Rv2616;logic_name=ena Chromosome ena mRNA 2945330 2945830 . + . ID=transcript:Rv2616;Parent=gene:Rv2616;biotype=protein_coding;transcript_id=Rv2616 Chromosome ena exon 2945330 2945830 . + . Parent=transcript:Rv2616;Name=Rv2616-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2616-1;rank=1 Chromosome ena CDS 2945330 2945830 . + 0 ID=CDS:Rv2616;Parent=transcript:Rv2616;protein_id=Rv2616 ### -Chromosome ena gene 2945847 2946287 . - . ID=gene:Rv2617c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv2617c;logic_name=ena +Chromosome ena gene 2945847 2946287 . - . ID=gene:Rv2617c;biotype=protein_coding;description=Probable transmembrane protein;gene_id=Rv2617c;logic_name=ena Chromosome ena mRNA 2945847 2946287 . - . ID=transcript:Rv2617c;Parent=gene:Rv2617c;biotype=protein_coding;transcript_id=Rv2617c Chromosome ena exon 2945847 2946287 . - . Parent=transcript:Rv2617c;Name=Rv2617c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2617c-1;rank=1 Chromosome ena CDS 2945847 2946287 . - 0 ID=CDS:Rv2617c;Parent=transcript:Rv2617c;protein_id=Rv2617c ### -Chromosome ena gene 2946434 2947111 . + . ID=gene:Rv2618;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2618;logic_name=ena +Chromosome ena gene 2946434 2947111 . + . ID=gene:Rv2618;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2618;logic_name=ena Chromosome ena mRNA 2946434 2947111 . + . ID=transcript:Rv2618;Parent=gene:Rv2618;biotype=protein_coding;transcript_id=Rv2618 Chromosome ena exon 2946434 2947111 . + . Parent=transcript:Rv2618;Name=Rv2618-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2618-1;rank=1 Chromosome ena CDS 2946434 2947111 . + 0 ID=CDS:Rv2618;Parent=transcript:Rv2618;protein_id=Rv2618 ### -Chromosome ena gene 2947096 2947449 . - . ID=gene:Rv2619c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2619c;logic_name=ena +Chromosome ena gene 2947096 2947449 . - . ID=gene:Rv2619c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2619c;logic_name=ena Chromosome ena mRNA 2947096 2947449 . - . ID=transcript:Rv2619c;Parent=gene:Rv2619c;biotype=protein_coding;transcript_id=Rv2619c Chromosome ena exon 2947096 2947449 . - . Parent=transcript:Rv2619c;Name=Rv2619c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2619c-1;rank=1 Chromosome ena CDS 2947096 2947449 . - 0 ID=CDS:Rv2619c;Parent=transcript:Rv2619c;protein_id=Rv2619c ### -Chromosome ena gene 2947462 2947887 . - . ID=gene:Rv2620c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2620c;logic_name=ena +Chromosome ena gene 2947462 2947887 . - . ID=gene:Rv2620c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2620c;logic_name=ena Chromosome ena mRNA 2947462 2947887 . - . ID=transcript:Rv2620c;Parent=gene:Rv2620c;biotype=protein_coding;transcript_id=Rv2620c Chromosome ena exon 2947462 2947887 . - . Parent=transcript:Rv2620c;Name=Rv2620c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2620c-1;rank=1 Chromosome ena CDS 2947462 2947887 . - 0 ID=CDS:Rv2620c;Parent=transcript:Rv2620c;protein_id=Rv2620c ### -Chromosome ena gene 2947884 2948558 . - . ID=gene:Rv2621c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2621c;logic_name=ena +Chromosome ena gene 2947884 2948558 . - . ID=gene:Rv2621c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv2621c;logic_name=ena Chromosome ena mRNA 2947884 2948558 . - . ID=transcript:Rv2621c;Parent=gene:Rv2621c;biotype=protein_coding;transcript_id=Rv2621c Chromosome ena exon 2947884 2948558 . - . Parent=transcript:Rv2621c;Name=Rv2621c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2621c-1;rank=1 Chromosome ena CDS 2947884 2948558 . - 0 ID=CDS:Rv2621c;Parent=transcript:Rv2621c;protein_id=Rv2621c ### -Chromosome ena gene 2948636 2949457 . + . ID=gene:Rv2622;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2622;logic_name=ena +Chromosome ena gene 2948636 2949457 . + . ID=gene:Rv2622;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2622;logic_name=ena Chromosome ena mRNA 2948636 2949457 . + . ID=transcript:Rv2622;Parent=gene:Rv2622;biotype=protein_coding;transcript_id=Rv2622 Chromosome ena exon 2948636 2949457 . + . Parent=transcript:Rv2622;Name=Rv2622-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2622-1;rank=1 Chromosome ena CDS 2948636 2949457 . + 0 ID=CDS:Rv2622;Parent=transcript:Rv2622;protein_id=Rv2622 ### -Chromosome ena gene 2949593 2950486 . + . ID=gene:Rv2623;Name=TB31.7;biotype=protein_coding;description=Universal stress protein family protein TB31.7;gene_id=Rv2623;logic_name=ena +Chromosome ena gene 2949593 2950486 . + . ID=gene:Rv2623;Name=TB31.7;biotype=protein_coding;description=Universal stress protein family protein TB31.7;gene_id=Rv2623;logic_name=ena Chromosome ena mRNA 2949593 2950486 . + . ID=transcript:Rv2623;Parent=gene:Rv2623;Name=TB31.7-1;biotype=protein_coding;transcript_id=Rv2623 Chromosome ena exon 2949593 2950486 . + . Parent=transcript:Rv2623;Name=Rv2623-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2623-1;rank=1 Chromosome ena CDS 2949593 2950486 . + 0 ID=CDS:Rv2623;Parent=transcript:Rv2623;protein_id=Rv2623 ### -Chromosome ena gene 2950489 2951307 . - . ID=gene:Rv2624c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2624c;logic_name=ena +Chromosome ena gene 2950489 2951307 . - . ID=gene:Rv2624c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv2624c;logic_name=ena Chromosome ena mRNA 2950489 2951307 . - . ID=transcript:Rv2624c;Parent=gene:Rv2624c;biotype=protein_coding;transcript_id=Rv2624c Chromosome ena exon 2950489 2951307 . - . Parent=transcript:Rv2624c;Name=Rv2624c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2624c-1;rank=1 Chromosome ena CDS 2950489 2951307 . - 0 ID=CDS:Rv2624c;Parent=transcript:Rv2624c;protein_id=Rv2624c ### -Chromosome ena gene 2951322 2952503 . - . ID=gene:Rv2625c;biotype=protein_coding;description=Probable conserved transmembrane alanine and leucine rich protein;gene_id=Rv2625c;logic_name=ena +Chromosome ena gene 2951322 2952503 . - . ID=gene:Rv2625c;biotype=protein_coding;description=Probable conserved transmembrane alanine and leucine rich protein;gene_id=Rv2625c;logic_name=ena Chromosome ena mRNA 2951322 2952503 . - . ID=transcript:Rv2625c;Parent=gene:Rv2625c;biotype=protein_coding;transcript_id=Rv2625c Chromosome ena exon 2951322 2952503 . - . Parent=transcript:Rv2625c;Name=Rv2625c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2625c-1;rank=1 Chromosome ena CDS 2951322 2952503 . - 0 ID=CDS:Rv2625c;Parent=transcript:Rv2625c;protein_id=Rv2625c ### -Chromosome ena gene 2952562 2952993 . - . ID=gene:Rv2626c;Name=hrp1;biotype=protein_coding;description=Hypoxic response protein 1 Hrp1;gene_id=Rv2626c;logic_name=ena +Chromosome ena gene 2952562 2952993 . - . ID=gene:Rv2626c;Name=hrp1;biotype=protein_coding;description=Hypoxic response protein 1 Hrp1;gene_id=Rv2626c;logic_name=ena Chromosome ena mRNA 2952562 2952993 . - . ID=transcript:Rv2626c;Parent=gene:Rv2626c;Name=hrp1-1;biotype=protein_coding;transcript_id=Rv2626c Chromosome ena exon 2952562 2952993 . - . Parent=transcript:Rv2626c;Name=Rv2626c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2626c-1;rank=1 Chromosome ena CDS 2952562 2952993 . - 0 ID=CDS:Rv2626c;Parent=transcript:Rv2626c;protein_id=Rv2626c ### -Chromosome ena gene 2953507 2954748 . - . ID=gene:Rv2627c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2627c;logic_name=ena +Chromosome ena gene 2953507 2954748 . - . ID=gene:Rv2627c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2627c;logic_name=ena Chromosome ena mRNA 2953507 2954748 . - . ID=transcript:Rv2627c;Parent=gene:Rv2627c;biotype=protein_coding;transcript_id=Rv2627c Chromosome ena exon 2953507 2954748 . - . Parent=transcript:Rv2627c;Name=Rv2627c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2627c-1;rank=1 Chromosome ena CDS 2953507 2954748 . - 0 ID=CDS:Rv2627c;Parent=transcript:Rv2627c;protein_id=Rv2627c ### -Chromosome ena gene 2955058 2955420 . + . ID=gene:Rv2628;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2628;logic_name=ena +Chromosome ena gene 2955058 2955420 . + . ID=gene:Rv2628;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2628;logic_name=ena Chromosome ena mRNA 2955058 2955420 . + . ID=transcript:Rv2628;Parent=gene:Rv2628;biotype=protein_coding;transcript_id=Rv2628 Chromosome ena exon 2955058 2955420 . + . Parent=transcript:Rv2628;Name=Rv2628-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2628-1;rank=1 Chromosome ena CDS 2955058 2955420 . + 0 ID=CDS:Rv2628;Parent=transcript:Rv2628;protein_id=Rv2628 ### -Chromosome ena gene 2955767 2956891 . + . ID=gene:Rv2629;biotype=protein_coding;description=Conserved protein;gene_id=Rv2629;logic_name=ena +Chromosome ena gene 2955767 2956891 . + . ID=gene:Rv2629;biotype=protein_coding;description=Conserved protein;gene_id=Rv2629;logic_name=ena Chromosome ena mRNA 2955767 2956891 . + . ID=transcript:Rv2629;Parent=gene:Rv2629;biotype=protein_coding;transcript_id=Rv2629 Chromosome ena exon 2955767 2956891 . + . Parent=transcript:Rv2629;Name=Rv2629-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2629-1;rank=1 Chromosome ena CDS 2955767 2956891 . + 0 ID=CDS:Rv2629;Parent=transcript:Rv2629;protein_id=Rv2629 ### -Chromosome ena gene 2956893 2957432 . + . ID=gene:Rv2630;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2630;logic_name=ena +Chromosome ena gene 2956893 2957432 . + . ID=gene:Rv2630;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2630;logic_name=ena Chromosome ena mRNA 2956893 2957432 . + . ID=transcript:Rv2630;Parent=gene:Rv2630;biotype=protein_coding;transcript_id=Rv2630 Chromosome ena exon 2956893 2957432 . + . Parent=transcript:Rv2630;Name=Rv2630-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2630-1;rank=1 Chromosome ena CDS 2956893 2957432 . + 0 ID=CDS:Rv2630;Parent=transcript:Rv2630;protein_id=Rv2630 ### -Chromosome ena gene 2957572 2958870 . + . ID=gene:Rv2631;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2631;logic_name=ena +Chromosome ena gene 2957572 2958870 . + . ID=gene:Rv2631;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2631;logic_name=ena Chromosome ena mRNA 2957572 2958870 . + . ID=transcript:Rv2631;Parent=gene:Rv2631;biotype=protein_coding;transcript_id=Rv2631 Chromosome ena exon 2957572 2958870 . + . Parent=transcript:Rv2631;Name=Rv2631-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2631-1;rank=1 Chromosome ena CDS 2957572 2958870 . + 0 ID=CDS:Rv2631;Parent=transcript:Rv2631;protein_id=Rv2631 ### -Chromosome ena gene 2958909 2959190 . - . ID=gene:Rv2632c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2632c;logic_name=ena +Chromosome ena gene 2958909 2959190 . - . ID=gene:Rv2632c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2632c;logic_name=ena Chromosome ena mRNA 2958909 2959190 . - . ID=transcript:Rv2632c;Parent=gene:Rv2632c;biotype=protein_coding;transcript_id=Rv2632c Chromosome ena exon 2958909 2959190 . - . Parent=transcript:Rv2632c;Name=Rv2632c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2632c-1;rank=1 Chromosome ena CDS 2958909 2959190 . - 0 ID=CDS:Rv2632c;Parent=transcript:Rv2632c;protein_id=Rv2632c ### -Chromosome ena gene 2959335 2959820 . - . ID=gene:Rv2633c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2633c;logic_name=ena +Chromosome ena gene 2959335 2959820 . - . ID=gene:Rv2633c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2633c;logic_name=ena Chromosome ena mRNA 2959335 2959820 . - . ID=transcript:Rv2633c;Parent=gene:Rv2633c;biotype=protein_coding;transcript_id=Rv2633c Chromosome ena exon 2959335 2959820 . - . Parent=transcript:Rv2633c;Name=Rv2633c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2633c-1;rank=1 Chromosome ena CDS 2959335 2959820 . - 0 ID=CDS:Rv2633c;Parent=transcript:Rv2633c;protein_id=Rv2633c ### -Chromosome ena gene 2960105 2962441 . - . ID=gene:Rv2634c;Name=PE_PGRS46;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS46;gene_id=Rv2634c;logic_name=ena +Chromosome ena gene 2960105 2962441 . - . ID=gene:Rv2634c;Name=PE_PGRS46;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS46;gene_id=Rv2634c;logic_name=ena Chromosome ena mRNA 2960105 2962441 . - . ID=transcript:Rv2634c;Parent=gene:Rv2634c;Name=PE_PGRS46-1;biotype=protein_coding;transcript_id=Rv2634c Chromosome ena exon 2960105 2962441 . - . Parent=transcript:Rv2634c;Name=Rv2634c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2634c-1;rank=1 Chromosome ena CDS 2960105 2962441 . - 0 ID=CDS:Rv2634c;Parent=transcript:Rv2634c;protein_id=Rv2634c ### -Chromosome ena gene 2962470 2962712 . + . ID=gene:Rv2635;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2635;logic_name=ena +Chromosome ena gene 2962470 2962712 . + . ID=gene:Rv2635;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2635;logic_name=ena Chromosome ena mRNA 2962470 2962712 . + . ID=transcript:Rv2635;Parent=gene:Rv2635;biotype=protein_coding;transcript_id=Rv2635 Chromosome ena exon 2962470 2962712 . + . Parent=transcript:Rv2635;Name=Rv2635-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2635-1;rank=1 Chromosome ena CDS 2962470 2962712 . + 0 ID=CDS:Rv2635;Parent=transcript:Rv2635;protein_id=Rv2635 ### -Chromosome ena gene 2962713 2963390 . + . ID=gene:Rv2636;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2636;logic_name=ena +Chromosome ena gene 2962713 2963390 . + . ID=gene:Rv2636;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2636;logic_name=ena Chromosome ena mRNA 2962713 2963390 . + . ID=transcript:Rv2636;Parent=gene:Rv2636;biotype=protein_coding;transcript_id=Rv2636 Chromosome ena exon 2962713 2963390 . + . Parent=transcript:Rv2636;Name=Rv2636-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2636-1;rank=1 Chromosome ena CDS 2962713 2963390 . + 0 ID=CDS:Rv2636;Parent=transcript:Rv2636;protein_id=Rv2636 ### -Chromosome ena gene 2963586 2964242 . + . ID=gene:Rv2637;Name=dedA;biotype=protein_coding;description=Possible transmembrane protein DedA;gene_id=Rv2637;logic_name=ena +Chromosome ena gene 2963586 2964242 . + . ID=gene:Rv2637;Name=dedA;biotype=protein_coding;description=Possible transmembrane protein DedA;gene_id=Rv2637;logic_name=ena Chromosome ena mRNA 2963586 2964242 . + . ID=transcript:Rv2637;Parent=gene:Rv2637;Name=dedA-1;biotype=protein_coding;transcript_id=Rv2637 Chromosome ena exon 2963586 2964242 . + . Parent=transcript:Rv2637;Name=Rv2637-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2637-1;rank=1 Chromosome ena CDS 2963586 2964242 . + 0 ID=CDS:Rv2637;Parent=transcript:Rv2637;protein_id=Rv2637 ### -Chromosome ena gene 2964405 2964851 . + . ID=gene:Rv2638;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2638;logic_name=ena +Chromosome ena gene 2964405 2964851 . + . ID=gene:Rv2638;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2638;logic_name=ena Chromosome ena mRNA 2964405 2964851 . + . ID=transcript:Rv2638;Parent=gene:Rv2638;biotype=protein_coding;transcript_id=Rv2638 Chromosome ena exon 2964405 2964851 . + . Parent=transcript:Rv2638;Name=Rv2638-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2638-1;rank=1 Chromosome ena CDS 2964405 2964851 . + 0 ID=CDS:Rv2638;Parent=transcript:Rv2638;protein_id=Rv2638 ### -Chromosome ena gene 2965026 2965358 . - . ID=gene:Rv2639c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2639c;logic_name=ena +Chromosome ena gene 2965026 2965358 . - . ID=gene:Rv2639c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2639c;logic_name=ena Chromosome ena mRNA 2965026 2965358 . - . ID=transcript:Rv2639c;Parent=gene:Rv2639c;biotype=protein_coding;transcript_id=Rv2639c Chromosome ena exon 2965026 2965358 . - . Parent=transcript:Rv2639c;Name=Rv2639c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2639c-1;rank=1 Chromosome ena CDS 2965026 2965358 . - 0 ID=CDS:Rv2639c;Parent=transcript:Rv2639c;protein_id=Rv2639c ### -Chromosome ena gene 2965478 2965837 . - . ID=gene:Rv2640c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably ArsR-family);gene_id=Rv2640c;logic_name=ena +Chromosome ena gene 2965478 2965837 . - . ID=gene:Rv2640c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably ArsR-family);gene_id=Rv2640c;logic_name=ena Chromosome ena mRNA 2965478 2965837 . - . ID=transcript:Rv2640c;Parent=gene:Rv2640c;biotype=protein_coding;transcript_id=Rv2640c Chromosome ena exon 2965478 2965837 . - . Parent=transcript:Rv2640c;Name=Rv2640c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2640c-1;rank=1 Chromosome ena CDS 2965478 2965837 . - 0 ID=CDS:Rv2640c;Parent=transcript:Rv2640c;protein_id=Rv2640c ### -Chromosome ena gene 2965939 2966397 . + . ID=gene:Rv2641;Name=cadI;biotype=protein_coding;description=Cadmium inducible protein CadI;gene_id=Rv2641;logic_name=ena +Chromosome ena gene 2965939 2966397 . + . ID=gene:Rv2641;Name=cadI;biotype=protein_coding;description=Cadmium inducible protein CadI;gene_id=Rv2641;logic_name=ena Chromosome ena mRNA 2965939 2966397 . + . ID=transcript:Rv2641;Parent=gene:Rv2641;Name=cadI-1;biotype=protein_coding;transcript_id=Rv2641 Chromosome ena exon 2965939 2966397 . + . Parent=transcript:Rv2641;Name=Rv2641-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2641-1;rank=1 Chromosome ena CDS 2965939 2966397 . + 0 ID=CDS:Rv2641;Parent=transcript:Rv2641;protein_id=Rv2641 ### -Chromosome ena gene 2966533 2966913 . + . ID=gene:Rv2642;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably ArsR-family);gene_id=Rv2642;logic_name=ena +Chromosome ena gene 2966533 2966913 . + . ID=gene:Rv2642;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably ArsR-family);gene_id=Rv2642;logic_name=ena Chromosome ena mRNA 2966533 2966913 . + . ID=transcript:Rv2642;Parent=gene:Rv2642;biotype=protein_coding;transcript_id=Rv2642 Chromosome ena exon 2966533 2966913 . + . Parent=transcript:Rv2642;Name=Rv2642-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2642-1;rank=1 Chromosome ena CDS 2966533 2966913 . + 0 ID=CDS:Rv2642;Parent=transcript:Rv2642;protein_id=Rv2642 ### -Chromosome ena gene 2966910 2968406 . + . ID=gene:Rv2643;Name=arsC;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsC;gene_id=Rv2643;logic_name=ena +Chromosome ena gene 2966910 2968406 . + . ID=gene:Rv2643;Name=arsC;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsC;gene_id=Rv2643;logic_name=ena Chromosome ena mRNA 2966910 2968406 . + . ID=transcript:Rv2643;Parent=gene:Rv2643;Name=arsC-1;biotype=protein_coding;transcript_id=Rv2643 Chromosome ena exon 2966910 2968406 . + . Parent=transcript:Rv2643;Name=Rv2643-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2643-1;rank=1 Chromosome ena CDS 2966910 2968406 . + 0 ID=CDS:Rv2643;Parent=transcript:Rv2643;protein_id=Rv2643 ### -Chromosome ena gene 2968533 2968850 . - . ID=gene:Rv2644c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2644c;logic_name=ena +Chromosome ena gene 2968533 2968850 . - . ID=gene:Rv2644c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2644c;logic_name=ena Chromosome ena mRNA 2968533 2968850 . - . ID=transcript:Rv2644c;Parent=gene:Rv2644c;biotype=protein_coding;transcript_id=Rv2644c Chromosome ena exon 2968533 2968850 . - . Parent=transcript:Rv2644c;Name=Rv2644c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2644c-1;rank=1 Chromosome ena CDS 2968533 2968850 . - 0 ID=CDS:Rv2644c;Parent=transcript:Rv2644c;protein_id=Rv2644c @@ -13929,1781 +13929,1781 @@ Chromosome ena transcript 2969942 2970013 . + . ID=transcript:EBG00000313362;Par Chromosome ena exon 2969942 2970013 . + . Parent=transcript:EBG00000313362;Name=EBG00000313362;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313362;rank=1 ### Chromosome ena_gene biological_region 2969942 2970013 . + . external_name=AL123456.3:gene:2969942..2970013;logic_name=ena_gene -Chromosome ena gene 2970123 2970554 . + . ID=gene:Rv2645;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2645;logic_name=ena +Chromosome ena gene 2970123 2970554 . + . ID=gene:Rv2645;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2645;logic_name=ena Chromosome ena mRNA 2970123 2970554 . + . ID=transcript:Rv2645;Parent=gene:Rv2645;biotype=protein_coding;transcript_id=Rv2645 Chromosome ena exon 2970123 2970554 . + . Parent=transcript:Rv2645;Name=Rv2645-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2645-1;rank=1 Chromosome ena CDS 2970123 2970554 . + 0 ID=CDS:Rv2645;Parent=transcript:Rv2645;protein_id=Rv2645 ### -Chromosome ena gene 2970551 2971549 . + . ID=gene:Rv2646;biotype=protein_coding;description=Probable integrase;gene_id=Rv2646;logic_name=ena +Chromosome ena gene 2970551 2971549 . + . ID=gene:Rv2646;biotype=protein_coding;description=Probable integrase;gene_id=Rv2646;logic_name=ena Chromosome ena mRNA 2970551 2971549 . + . ID=transcript:Rv2646;Parent=gene:Rv2646;biotype=protein_coding;transcript_id=Rv2646 Chromosome ena exon 2970551 2971549 . + . Parent=transcript:Rv2646;Name=Rv2646-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2646-1;rank=1 Chromosome ena CDS 2970551 2971549 . + 0 ID=CDS:Rv2646;Parent=transcript:Rv2646;protein_id=Rv2646 ### -Chromosome ena gene 2971659 2972027 . + . ID=gene:Rv2647;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2647;logic_name=ena +Chromosome ena gene 2971659 2972027 . + . ID=gene:Rv2647;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2647;logic_name=ena Chromosome ena mRNA 2971659 2972027 . + . ID=transcript:Rv2647;Parent=gene:Rv2647;biotype=protein_coding;transcript_id=Rv2647 Chromosome ena exon 2971659 2972027 . + . Parent=transcript:Rv2647;Name=Rv2647-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2647-1;rank=1 Chromosome ena CDS 2971659 2972027 . + 0 ID=CDS:Rv2647;Parent=transcript:Rv2647;protein_id=Rv2647 ### -Chromosome ena_mobile_element biological_region 2972109 2973463 . + . external_name=IS6110-10%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 2972160 2972486 . + . ID=gene:Rv2648;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2648;logic_name=ena +Chromosome ena_mobile_element biological_region 2972109 2973463 . + . external_name=IS6110-10%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 2972160 2972486 . + . ID=gene:Rv2648;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv2648;logic_name=ena Chromosome ena mRNA 2972160 2972486 . + . ID=transcript:Rv2648;Parent=gene:Rv2648;biotype=protein_coding;transcript_id=Rv2648 Chromosome ena exon 2972160 2972486 . + . Parent=transcript:Rv2648;Name=Rv2648-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2648-1;rank=1 Chromosome ena CDS 2972160 2972486 . + 0 ID=CDS:Rv2648;Parent=transcript:Rv2648;protein_id=Rv2648 ### -Chromosome ena gene 2972435 2973421 . + . ID=gene:Rv2649;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110;gene_id=Rv2649;logic_name=ena +Chromosome ena gene 2972435 2973421 . + . ID=gene:Rv2649;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110;gene_id=Rv2649;logic_name=ena Chromosome ena mRNA 2972435 2973421 . + . ID=transcript:Rv2649;Parent=gene:Rv2649;biotype=protein_coding;transcript_id=Rv2649 Chromosome ena exon 2972435 2973421 . + . Parent=transcript:Rv2649;Name=Rv2649-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2649-1;rank=1 Chromosome ena CDS 2972435 2973421 . + 0 ID=CDS:Rv2649;Parent=transcript:Rv2649;protein_id=Rv2649 ### -Chromosome ena gene 2973795 2975234 . - . ID=gene:Rv2650c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2650c;logic_name=ena +Chromosome ena gene 2973795 2975234 . - . ID=gene:Rv2650c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2650c;logic_name=ena Chromosome ena mRNA 2973795 2975234 . - . ID=transcript:Rv2650c;Parent=gene:Rv2650c;biotype=protein_coding;transcript_id=Rv2650c Chromosome ena exon 2973795 2975234 . - . Parent=transcript:Rv2650c;Name=Rv2650c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2650c-1;rank=1 Chromosome ena CDS 2973795 2975234 . - 0 ID=CDS:Rv2650c;Parent=transcript:Rv2650c;protein_id=Rv2650c ### -Chromosome ena gene 2975242 2975775 . - . ID=gene:Rv2651c;biotype=protein_coding;description=Possible PhiRv2 prophage protease;gene_id=Rv2651c;logic_name=ena +Chromosome ena gene 2975242 2975775 . - . ID=gene:Rv2651c;biotype=protein_coding;description=Possible PhiRv2 prophage protease;gene_id=Rv2651c;logic_name=ena Chromosome ena mRNA 2975242 2975775 . - . ID=transcript:Rv2651c;Parent=gene:Rv2651c;biotype=protein_coding;transcript_id=Rv2651c Chromosome ena exon 2975242 2975775 . - . Parent=transcript:Rv2651c;Name=Rv2651c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2651c-1;rank=1 Chromosome ena CDS 2975242 2975775 . - 0 ID=CDS:Rv2651c;Parent=transcript:Rv2651c;protein_id=Rv2651c ### -Chromosome ena gene 2975928 2976554 . - . ID=gene:Rv2652c;biotype=protein_coding;description=Probable PhiRv2 prophage protein;gene_id=Rv2652c;logic_name=ena +Chromosome ena gene 2975928 2976554 . - . ID=gene:Rv2652c;biotype=protein_coding;description=Probable PhiRv2 prophage protein;gene_id=Rv2652c;logic_name=ena Chromosome ena mRNA 2975928 2976554 . - . ID=transcript:Rv2652c;Parent=gene:Rv2652c;biotype=protein_coding;transcript_id=Rv2652c Chromosome ena exon 2975928 2976554 . - . Parent=transcript:Rv2652c;Name=Rv2652c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2652c-1;rank=1 Chromosome ena CDS 2975928 2976554 . - 0 ID=CDS:Rv2652c;Parent=transcript:Rv2652c;protein_id=Rv2652c ### -Chromosome ena gene 2976586 2976909 . - . ID=gene:Rv2653c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2653c;logic_name=ena +Chromosome ena gene 2976586 2976909 . - . ID=gene:Rv2653c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2653c;logic_name=ena Chromosome ena mRNA 2976586 2976909 . - . ID=transcript:Rv2653c;Parent=gene:Rv2653c;biotype=protein_coding;transcript_id=Rv2653c Chromosome ena exon 2976586 2976909 . - . Parent=transcript:Rv2653c;Name=Rv2653c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2653c-1;rank=1 Chromosome ena CDS 2976586 2976909 . - 0 ID=CDS:Rv2653c;Parent=transcript:Rv2653c;protein_id=Rv2653c ### -Chromosome ena gene 2976989 2977234 . - . ID=gene:Rv2654c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2654c;logic_name=ena +Chromosome ena gene 2976989 2977234 . - . ID=gene:Rv2654c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2654c;logic_name=ena Chromosome ena mRNA 2976989 2977234 . - . ID=transcript:Rv2654c;Parent=gene:Rv2654c;biotype=protein_coding;transcript_id=Rv2654c Chromosome ena exon 2976989 2977234 . - . Parent=transcript:Rv2654c;Name=Rv2654c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2654c-1;rank=1 Chromosome ena CDS 2976989 2977234 . - 0 ID=CDS:Rv2654c;Parent=transcript:Rv2654c;protein_id=Rv2654c ### -Chromosome ena gene 2977231 2978658 . - . ID=gene:Rv2655c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2655c;logic_name=ena +Chromosome ena gene 2977231 2978658 . - . ID=gene:Rv2655c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2655c;logic_name=ena Chromosome ena mRNA 2977231 2978658 . - . ID=transcript:Rv2655c;Parent=gene:Rv2655c;biotype=protein_coding;transcript_id=Rv2655c Chromosome ena exon 2977231 2978658 . - . Parent=transcript:Rv2655c;Name=Rv2655c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2655c-1;rank=1 Chromosome ena CDS 2977231 2978658 . - 0 ID=CDS:Rv2655c;Parent=transcript:Rv2655c;protein_id=Rv2655c ### -Chromosome ena gene 2978660 2979052 . - . ID=gene:Rv2656c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2656c;logic_name=ena +Chromosome ena gene 2978660 2979052 . - . ID=gene:Rv2656c;biotype=protein_coding;description=Possible PhiRv2 prophage protein;gene_id=Rv2656c;logic_name=ena Chromosome ena mRNA 2978660 2979052 . - . ID=transcript:Rv2656c;Parent=gene:Rv2656c;biotype=protein_coding;transcript_id=Rv2656c Chromosome ena exon 2978660 2979052 . - . Parent=transcript:Rv2656c;Name=Rv2656c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2656c-1;rank=1 Chromosome ena CDS 2978660 2979052 . - 0 ID=CDS:Rv2656c;Parent=transcript:Rv2656c;protein_id=Rv2656c ### -Chromosome ena gene 2979049 2979309 . - . ID=gene:Rv2657c;biotype=protein_coding;description=Probable PhiRv2 prophage protein;gene_id=Rv2657c;logic_name=ena +Chromosome ena gene 2979049 2979309 . - . ID=gene:Rv2657c;biotype=protein_coding;description=Probable PhiRv2 prophage protein;gene_id=Rv2657c;logic_name=ena Chromosome ena mRNA 2979049 2979309 . - . ID=transcript:Rv2657c;Parent=gene:Rv2657c;biotype=protein_coding;transcript_id=Rv2657c Chromosome ena exon 2979049 2979309 . - . Parent=transcript:Rv2657c;Name=Rv2657c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2657c-1;rank=1 Chromosome ena CDS 2979049 2979309 . - 0 ID=CDS:Rv2657c;Parent=transcript:Rv2657c;protein_id=Rv2657c ### -Chromosome ena gene 2979326 2979688 . - . ID=gene:Rv2658c;biotype=protein_coding;description=Possible prophage protein;gene_id=Rv2658c;logic_name=ena +Chromosome ena gene 2979326 2979688 . - . ID=gene:Rv2658c;biotype=protein_coding;description=Possible prophage protein;gene_id=Rv2658c;logic_name=ena Chromosome ena mRNA 2979326 2979688 . - . ID=transcript:Rv2658c;Parent=gene:Rv2658c;biotype=protein_coding;transcript_id=Rv2658c Chromosome ena exon 2979326 2979688 . - . Parent=transcript:Rv2658c;Name=Rv2658c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2658c-1;rank=1 Chromosome ena CDS 2979326 2979688 . - 0 ID=CDS:Rv2658c;Parent=transcript:Rv2658c;protein_id=Rv2658c ### -Chromosome ena gene 2979691 2980818 . - . ID=gene:Rv2659c;biotype=protein_coding;description=Probable PhiRv2 prophage integrase;gene_id=Rv2659c;logic_name=ena +Chromosome ena gene 2979691 2980818 . - . ID=gene:Rv2659c;biotype=protein_coding;description=Probable PhiRv2 prophage integrase;gene_id=Rv2659c;logic_name=ena Chromosome ena mRNA 2979691 2980818 . - . ID=transcript:Rv2659c;Parent=gene:Rv2659c;biotype=protein_coding;transcript_id=Rv2659c Chromosome ena exon 2979691 2980818 . - . Parent=transcript:Rv2659c;Name=Rv2659c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2659c-1;rank=1 Chromosome ena CDS 2979691 2980818 . - 0 ID=CDS:Rv2659c;Parent=transcript:Rv2659c;protein_id=Rv2659c ### -Chromosome ena gene 2980963 2981190 . - . ID=gene:Rv2660c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2660c;logic_name=ena +Chromosome ena gene 2980963 2981190 . - . ID=gene:Rv2660c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2660c;logic_name=ena Chromosome ena mRNA 2980963 2981190 . - . ID=transcript:Rv2660c;Parent=gene:Rv2660c;biotype=protein_coding;transcript_id=Rv2660c Chromosome ena exon 2980963 2981190 . - . Parent=transcript:Rv2660c;Name=Rv2660c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2660c-1;rank=1 Chromosome ena CDS 2980963 2981190 . - 0 ID=CDS:Rv2660c;Parent=transcript:Rv2660c;protein_id=Rv2660c ### -Chromosome ena gene 2981187 2981576 . - . ID=gene:Rv2661c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2661c;logic_name=ena +Chromosome ena gene 2981187 2981576 . - . ID=gene:Rv2661c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2661c;logic_name=ena Chromosome ena mRNA 2981187 2981576 . - . ID=transcript:Rv2661c;Parent=gene:Rv2661c;biotype=protein_coding;transcript_id=Rv2661c Chromosome ena exon 2981187 2981576 . - . Parent=transcript:Rv2661c;Name=Rv2661c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2661c-1;rank=1 Chromosome ena CDS 2981187 2981576 . - 0 ID=CDS:Rv2661c;Parent=transcript:Rv2661c;protein_id=Rv2661c ### -Chromosome ena gene 2981482 2981754 . + . ID=gene:Rv2662;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2662;logic_name=ena +Chromosome ena gene 2981482 2981754 . + . ID=gene:Rv2662;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2662;logic_name=ena Chromosome ena mRNA 2981482 2981754 . + . ID=transcript:Rv2662;Parent=gene:Rv2662;biotype=protein_coding;transcript_id=Rv2662 Chromosome ena exon 2981482 2981754 . + . Parent=transcript:Rv2662;Name=Rv2662-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2662-1;rank=1 Chromosome ena CDS 2981482 2981754 . + 0 ID=CDS:Rv2662;Parent=transcript:Rv2662;protein_id=Rv2662 ### -Chromosome ena gene 2981853 2982086 . + . ID=gene:Rv2663;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2663;logic_name=ena +Chromosome ena gene 2981853 2982086 . + . ID=gene:Rv2663;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2663;logic_name=ena Chromosome ena mRNA 2981853 2982086 . + . ID=transcript:Rv2663;Parent=gene:Rv2663;biotype=protein_coding;transcript_id=Rv2663 Chromosome ena exon 2981853 2982086 . + . Parent=transcript:Rv2663;Name=Rv2663-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2663-1;rank=1 Chromosome ena CDS 2981853 2982086 . + 0 ID=CDS:Rv2663;Parent=transcript:Rv2663;protein_id=Rv2663 ### -Chromosome ena gene 2982097 2982351 . + . ID=gene:Rv2664;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2664;logic_name=ena +Chromosome ena gene 2982097 2982351 . + . ID=gene:Rv2664;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2664;logic_name=ena Chromosome ena mRNA 2982097 2982351 . + . ID=transcript:Rv2664;Parent=gene:Rv2664;biotype=protein_coding;transcript_id=Rv2664 Chromosome ena exon 2982097 2982351 . + . Parent=transcript:Rv2664;Name=Rv2664-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2664-1;rank=1 Chromosome ena CDS 2982097 2982351 . + 0 ID=CDS:Rv2664;Parent=transcript:Rv2664;protein_id=Rv2664 ### -Chromosome ena gene 2982699 2982980 . + . ID=gene:Rv2665;biotype=protein_coding;description=Hypothetical arginine rich protein;gene_id=Rv2665;logic_name=ena +Chromosome ena gene 2982699 2982980 . + . ID=gene:Rv2665;biotype=protein_coding;description=Hypothetical arginine rich protein;gene_id=Rv2665;logic_name=ena Chromosome ena mRNA 2982699 2982980 . + . ID=transcript:Rv2665;Parent=gene:Rv2665;biotype=protein_coding;transcript_id=Rv2665 Chromosome ena exon 2982699 2982980 . + . Parent=transcript:Rv2665;Name=Rv2665-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2665-1;rank=1 Chromosome ena CDS 2982699 2982980 . + 0 ID=CDS:Rv2665;Parent=transcript:Rv2665;protein_id=Rv2665 ### -Chromosome ena_mobile_element biological_region 2982946 2983854 . + . external_name=IS1081'-4%2C len: 909 nt. Defective Insertion sequence IS1081 element%3B truncated at 3'-end.;logic_name=ena_mobile_element -Chromosome ena gene 2983071 2983874 . + . ID=gene:Rv2666;biotype=protein_coding;description=Probable transposase for insertion sequence element IS1081 (fragment);gene_id=Rv2666;logic_name=ena +Chromosome ena_mobile_element biological_region 2982946 2983854 . + . external_name=IS1081'-4%2C len: 909 nt. Defective Insertion sequence IS1081 element%3B truncated at 3'-end.;logic_name=ena_mobile_element +Chromosome ena gene 2983071 2983874 . + . ID=gene:Rv2666;biotype=protein_coding;description=Probable transposase for insertion sequence element IS1081 (fragment);gene_id=Rv2666;logic_name=ena Chromosome ena mRNA 2983071 2983874 . + . ID=transcript:Rv2666;Parent=gene:Rv2666;biotype=protein_coding;transcript_id=Rv2666 Chromosome ena exon 2983071 2983874 . + . Parent=transcript:Rv2666;Name=Rv2666-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2666-1;rank=1 Chromosome ena CDS 2983071 2983874 . + 0 ID=CDS:Rv2666;Parent=transcript:Rv2666;protein_id=Rv2666 ### -Chromosome ena gene 2983896 2984654 . + . ID=gene:Rv2667;Name=clpC2;biotype=protein_coding;description=Possible ATP-dependent protease ATP-binding subunit ClpC2;gene_id=Rv2667;logic_name=ena +Chromosome ena gene 2983896 2984654 . + . ID=gene:Rv2667;Name=clpC2;biotype=protein_coding;description=Possible ATP-dependent protease ATP-binding subunit ClpC2;gene_id=Rv2667;logic_name=ena Chromosome ena mRNA 2983896 2984654 . + . ID=transcript:Rv2667;Parent=gene:Rv2667;Name=clpC2-1;biotype=protein_coding;transcript_id=Rv2667 Chromosome ena exon 2983896 2984654 . + . Parent=transcript:Rv2667;Name=Rv2667-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2667-1;rank=1 Chromosome ena CDS 2983896 2984654 . + 0 ID=CDS:Rv2667;Parent=transcript:Rv2667;protein_id=Rv2667 ### -Chromosome ena gene 2984733 2985254 . + . ID=gene:Rv2668;biotype=protein_coding;description=Possible exported alanine and valine rich protein;gene_id=Rv2668;logic_name=ena +Chromosome ena gene 2984733 2985254 . + . ID=gene:Rv2668;biotype=protein_coding;description=Possible exported alanine and valine rich protein;gene_id=Rv2668;logic_name=ena Chromosome ena mRNA 2984733 2985254 . + . ID=transcript:Rv2668;Parent=gene:Rv2668;biotype=protein_coding;transcript_id=Rv2668 Chromosome ena exon 2984733 2985254 . + . Parent=transcript:Rv2668;Name=Rv2668-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2668-1;rank=1 Chromosome ena CDS 2984733 2985254 . + 0 ID=CDS:Rv2668;Parent=transcript:Rv2668;protein_id=Rv2668 ### -Chromosome ena gene 2985283 2985753 . + . ID=gene:Rv2669;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2669;logic_name=ena +Chromosome ena gene 2985283 2985753 . + . ID=gene:Rv2669;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2669;logic_name=ena Chromosome ena mRNA 2985283 2985753 . + . ID=transcript:Rv2669;Parent=gene:Rv2669;biotype=protein_coding;transcript_id=Rv2669 Chromosome ena exon 2985283 2985753 . + . Parent=transcript:Rv2669;Name=Rv2669-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2669-1;rank=1 Chromosome ena CDS 2985283 2985753 . + 0 ID=CDS:Rv2669;Parent=transcript:Rv2669;protein_id=Rv2669 ### -Chromosome ena gene 2985731 2986840 . - . ID=gene:Rv2670c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2670c;logic_name=ena +Chromosome ena gene 2985731 2986840 . - . ID=gene:Rv2670c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2670c;logic_name=ena Chromosome ena mRNA 2985731 2986840 . - . ID=transcript:Rv2670c;Parent=gene:Rv2670c;biotype=protein_coding;transcript_id=Rv2670c Chromosome ena exon 2985731 2986840 . - . Parent=transcript:Rv2670c;Name=Rv2670c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2670c-1;rank=1 Chromosome ena CDS 2985731 2986840 . - 0 ID=CDS:Rv2670c;Parent=transcript:Rv2670c;protein_id=Rv2670c ### -Chromosome ena gene 2986839 2987615 . + . ID=gene:Rv2671;Name=ribD;biotype=protein_coding;description=Possible bifunctional enzyme riboflavin biosynthesis protein RibD: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase);gene_id=Rv2671;logic_name=ena +Chromosome ena gene 2986839 2987615 . + . ID=gene:Rv2671;Name=ribD;biotype=protein_coding;description=Possible bifunctional enzyme riboflavin biosynthesis protein RibD: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP reductase);gene_id=Rv2671;logic_name=ena Chromosome ena mRNA 2986839 2987615 . + . ID=transcript:Rv2671;Parent=gene:Rv2671;Name=ribD-1;biotype=protein_coding;transcript_id=Rv2671 Chromosome ena exon 2986839 2987615 . + . Parent=transcript:Rv2671;Name=Rv2671-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2671-1;rank=1 Chromosome ena CDS 2986839 2987615 . + 0 ID=CDS:Rv2671;Parent=transcript:Rv2671;protein_id=Rv2671 ### -Chromosome ena gene 2987682 2989268 . + . ID=gene:Rv2672;biotype=protein_coding;description=Possible secreted protease;gene_id=Rv2672;logic_name=ena +Chromosome ena gene 2987682 2989268 . + . ID=gene:Rv2672;biotype=protein_coding;description=Possible secreted protease;gene_id=Rv2672;logic_name=ena Chromosome ena mRNA 2987682 2989268 . + . ID=transcript:Rv2672;Parent=gene:Rv2672;biotype=protein_coding;transcript_id=Rv2672 Chromosome ena exon 2987682 2989268 . + . Parent=transcript:Rv2672;Name=Rv2672-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2672-1;rank=1 Chromosome ena CDS 2987682 2989268 . + 0 ID=CDS:Rv2672;Parent=transcript:Rv2672;protein_id=Rv2672 ### -Chromosome ena gene 2989291 2990592 . + . ID=gene:Rv2673;Name=aftC;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftC;gene_id=Rv2673;logic_name=ena +Chromosome ena gene 2989291 2990592 . + . ID=gene:Rv2673;Name=aftC;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftC;gene_id=Rv2673;logic_name=ena Chromosome ena mRNA 2989291 2990592 . + . ID=transcript:Rv2673;Parent=gene:Rv2673;Name=aftC-1;biotype=protein_coding;transcript_id=Rv2673 Chromosome ena exon 2989291 2990592 . + . Parent=transcript:Rv2673;Name=Rv2673-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2673-1;rank=1 Chromosome ena CDS 2989291 2990592 . + 0 ID=CDS:Rv2673;Parent=transcript:Rv2673;protein_id=Rv2673 ### -Chromosome ena gene 2990706 2991116 . + . ID=gene:Rv2674;Name=msrB;biotype=protein_coding;description=Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase);gene_id=Rv2674;logic_name=ena +Chromosome ena gene 2990706 2991116 . + . ID=gene:Rv2674;Name=msrB;biotype=protein_coding;description=Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase);gene_id=Rv2674;logic_name=ena Chromosome ena mRNA 2990706 2991116 . + . ID=transcript:Rv2674;Parent=gene:Rv2674;Name=msrB-1;biotype=protein_coding;transcript_id=Rv2674 Chromosome ena exon 2990706 2991116 . + . Parent=transcript:Rv2674;Name=Rv2674-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2674-1;rank=1 Chromosome ena CDS 2990706 2991116 . + 0 ID=CDS:Rv2674;Parent=transcript:Rv2674;protein_id=Rv2674 ### -Chromosome ena gene 2991184 2991936 . - . ID=gene:Rv2675c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2675c;logic_name=ena +Chromosome ena gene 2991184 2991936 . - . ID=gene:Rv2675c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2675c;logic_name=ena Chromosome ena mRNA 2991184 2991936 . - . ID=transcript:Rv2675c;Parent=gene:Rv2675c;biotype=protein_coding;transcript_id=Rv2675c Chromosome ena exon 2991184 2991936 . - . Parent=transcript:Rv2675c;Name=Rv2675c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2675c-1;rank=1 Chromosome ena CDS 2991184 2991936 . - 0 ID=CDS:Rv2675c;Parent=transcript:Rv2675c;protein_id=Rv2675c ### -Chromosome ena gene 2991933 2992628 . - . ID=gene:Rv2676c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2676c;logic_name=ena +Chromosome ena gene 2991933 2992628 . - . ID=gene:Rv2676c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2676c;logic_name=ena Chromosome ena mRNA 2991933 2992628 . - . ID=transcript:Rv2676c;Parent=gene:Rv2676c;biotype=protein_coding;transcript_id=Rv2676c Chromosome ena exon 2991933 2992628 . - . Parent=transcript:Rv2676c;Name=Rv2676c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2676c-1;rank=1 Chromosome ena CDS 2991933 2992628 . - 0 ID=CDS:Rv2676c;Parent=transcript:Rv2676c;protein_id=Rv2676c ### -Chromosome ena gene 2992634 2993992 . - . ID=gene:Rv2677c;Name=hemY;biotype=protein_coding;description=Probable protoporphyrinogen oxidase HemY (protoporphyrinogen-IX oxidase) (protoporphyrinogenase) (PPO);gene_id=Rv2677c;logic_name=ena +Chromosome ena gene 2992634 2993992 . - . ID=gene:Rv2677c;Name=hemY;biotype=protein_coding;description=Probable protoporphyrinogen oxidase HemY (protoporphyrinogen-IX oxidase) (protoporphyrinogenase) (PPO);gene_id=Rv2677c;logic_name=ena Chromosome ena mRNA 2992634 2993992 . - . ID=transcript:Rv2677c;Parent=gene:Rv2677c;Name=hemY-1;biotype=protein_coding;transcript_id=Rv2677c Chromosome ena exon 2992634 2993992 . - . Parent=transcript:Rv2677c;Name=Rv2677c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2677c-1;rank=1 Chromosome ena CDS 2992634 2993992 . - 0 ID=CDS:Rv2677c;Parent=transcript:Rv2677c;protein_id=Rv2677c ### -Chromosome ena gene 2993989 2995062 . - . ID=gene:Rv2678c;Name=hemE;biotype=protein_coding;description=Probable uroporphyrinogen decarboxylase HemE (uroporphyrinogen III decarboxylase) (URO-D) (UPD);gene_id=Rv2678c;logic_name=ena +Chromosome ena gene 2993989 2995062 . - . ID=gene:Rv2678c;Name=hemE;biotype=protein_coding;description=Probable uroporphyrinogen decarboxylase HemE (uroporphyrinogen III decarboxylase) (URO-D) (UPD);gene_id=Rv2678c;logic_name=ena Chromosome ena mRNA 2993989 2995062 . - . ID=transcript:Rv2678c;Parent=gene:Rv2678c;Name=hemE-1;biotype=protein_coding;transcript_id=Rv2678c Chromosome ena exon 2993989 2995062 . - . Parent=transcript:Rv2678c;Name=Rv2678c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2678c-1;rank=1 Chromosome ena CDS 2993989 2995062 . - 0 ID=CDS:Rv2678c;Parent=transcript:Rv2678c;protein_id=Rv2678c ### -Chromosome ena gene 2995115 2995945 . + . ID=gene:Rv2679;Name=echA15;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA15 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2679;logic_name=ena +Chromosome ena gene 2995115 2995945 . + . ID=gene:Rv2679;Name=echA15;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA15 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2679;logic_name=ena Chromosome ena mRNA 2995115 2995945 . + . ID=transcript:Rv2679;Parent=gene:Rv2679;Name=echA15-1;biotype=protein_coding;transcript_id=Rv2679 Chromosome ena exon 2995115 2995945 . + . Parent=transcript:Rv2679;Name=Rv2679-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2679-1;rank=1 Chromosome ena CDS 2995115 2995945 . + 0 ID=CDS:Rv2679;Parent=transcript:Rv2679;protein_id=Rv2679 ### -Chromosome ena gene 2996105 2996737 . + . ID=gene:Rv2680;biotype=protein_coding;description=Conserved protein;gene_id=Rv2680;logic_name=ena +Chromosome ena gene 2996105 2996737 . + . ID=gene:Rv2680;biotype=protein_coding;description=Conserved protein;gene_id=Rv2680;logic_name=ena Chromosome ena mRNA 2996105 2996737 . + . ID=transcript:Rv2680;Parent=gene:Rv2680;biotype=protein_coding;transcript_id=Rv2680 Chromosome ena exon 2996105 2996737 . + . Parent=transcript:Rv2680;Name=Rv2680-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2680-1;rank=1 Chromosome ena CDS 2996105 2996737 . + 0 ID=CDS:Rv2680;Parent=transcript:Rv2680;protein_id=Rv2680 ### -Chromosome ena gene 2996739 2998055 . + . ID=gene:Rv2681;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2681;logic_name=ena +Chromosome ena gene 2996739 2998055 . + . ID=gene:Rv2681;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2681;logic_name=ena Chromosome ena mRNA 2996739 2998055 . + . ID=transcript:Rv2681;Parent=gene:Rv2681;biotype=protein_coding;transcript_id=Rv2681 Chromosome ena exon 2996739 2998055 . + . Parent=transcript:Rv2681;Name=Rv2681-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2681-1;rank=1 Chromosome ena CDS 2996739 2998055 . + 0 ID=CDS:Rv2681;Parent=transcript:Rv2681;protein_id=Rv2681 ### -Chromosome ena gene 2998052 2999968 . - . ID=gene:Rv2682c;Name=dxs1;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate synthase Dxs1 (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS);gene_id=Rv2682c;logic_name=ena +Chromosome ena gene 2998052 2999968 . - . ID=gene:Rv2682c;Name=dxs1;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate synthase Dxs1 (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS);gene_id=Rv2682c;logic_name=ena Chromosome ena mRNA 2998052 2999968 . - . ID=transcript:Rv2682c;Parent=gene:Rv2682c;Name=dxs1-1;biotype=protein_coding;transcript_id=Rv2682c Chromosome ena exon 2998052 2999968 . - . Parent=transcript:Rv2682c;Name=Rv2682c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2682c-1;rank=1 Chromosome ena CDS 2998052 2999968 . - 0 ID=CDS:Rv2682c;Parent=transcript:Rv2682c;protein_id=Rv2682c ### -Chromosome ena gene 3000112 3000609 . + . ID=gene:Rv2683;biotype=protein_coding;description=Conserved protein;gene_id=Rv2683;logic_name=ena +Chromosome ena gene 3000112 3000609 . + . ID=gene:Rv2683;biotype=protein_coding;description=Conserved protein;gene_id=Rv2683;logic_name=ena Chromosome ena mRNA 3000112 3000609 . + . ID=transcript:Rv2683;Parent=gene:Rv2683;biotype=protein_coding;transcript_id=Rv2683 Chromosome ena exon 3000112 3000609 . + . Parent=transcript:Rv2683;Name=Rv2683-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2683-1;rank=1 Chromosome ena CDS 3000112 3000609 . + 0 ID=CDS:Rv2683;Parent=transcript:Rv2683;protein_id=Rv2683 ### -Chromosome ena gene 3000614 3001903 . + . ID=gene:Rv2684;Name=arsA;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsA;gene_id=Rv2684;logic_name=ena +Chromosome ena gene 3000614 3001903 . + . ID=gene:Rv2684;Name=arsA;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsA;gene_id=Rv2684;logic_name=ena Chromosome ena mRNA 3000614 3001903 . + . ID=transcript:Rv2684;Parent=gene:Rv2684;Name=arsA-1;biotype=protein_coding;transcript_id=Rv2684 Chromosome ena exon 3000614 3001903 . + . Parent=transcript:Rv2684;Name=Rv2684-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2684-1;rank=1 Chromosome ena CDS 3000614 3001903 . + 0 ID=CDS:Rv2684;Parent=transcript:Rv2684;protein_id=Rv2684 ### -Chromosome ena gene 3001983 3003269 . + . ID=gene:Rv2685;Name=arsB1;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsB1;gene_id=Rv2685;logic_name=ena +Chromosome ena gene 3001983 3003269 . + . ID=gene:Rv2685;Name=arsB1;biotype=protein_coding;description=Probable arsenic-transport integral membrane protein ArsB1;gene_id=Rv2685;logic_name=ena Chromosome ena mRNA 3001983 3003269 . + . ID=transcript:Rv2685;Parent=gene:Rv2685;Name=arsB1-1;biotype=protein_coding;transcript_id=Rv2685 Chromosome ena exon 3001983 3003269 . + . Parent=transcript:Rv2685;Name=Rv2685-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2685-1;rank=1 Chromosome ena CDS 3001983 3003269 . + 0 ID=CDS:Rv2685;Parent=transcript:Rv2685;protein_id=Rv2685 ### -Chromosome ena gene 3003280 3004038 . - . ID=gene:Rv2686c;biotype=protein_coding;description=Antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter;gene_id=Rv2686c;logic_name=ena +Chromosome ena gene 3003280 3004038 . - . ID=gene:Rv2686c;biotype=protein_coding;description=Antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter;gene_id=Rv2686c;logic_name=ena Chromosome ena mRNA 3003280 3004038 . - . ID=transcript:Rv2686c;Parent=gene:Rv2686c;biotype=protein_coding;transcript_id=Rv2686c Chromosome ena exon 3003280 3004038 . - . Parent=transcript:Rv2686c;Name=Rv2686c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2686c-1;rank=1 Chromosome ena CDS 3003280 3004038 . - 0 ID=CDS:Rv2686c;Parent=transcript:Rv2686c;protein_id=Rv2686c ### -Chromosome ena gene 3004035 3004748 . - . ID=gene:Rv2687c;biotype=protein_coding;description=Antibiotic-transport integral membrane leucine and valine rich protein ABC transporter;gene_id=Rv2687c;logic_name=ena +Chromosome ena gene 3004035 3004748 . - . ID=gene:Rv2687c;biotype=protein_coding;description=Antibiotic-transport integral membrane leucine and valine rich protein ABC transporter;gene_id=Rv2687c;logic_name=ena Chromosome ena mRNA 3004035 3004748 . - . ID=transcript:Rv2687c;Parent=gene:Rv2687c;biotype=protein_coding;transcript_id=Rv2687c Chromosome ena exon 3004035 3004748 . - . Parent=transcript:Rv2687c;Name=Rv2687c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2687c-1;rank=1 Chromosome ena CDS 3004035 3004748 . - 0 ID=CDS:Rv2687c;Parent=transcript:Rv2687c;protein_id=Rv2687c ### -Chromosome ena gene 3004745 3005650 . - . ID=gene:Rv2688c;biotype=protein_coding;description=Antibiotic-transport ATP-binding protein ABC transporter;gene_id=Rv2688c;logic_name=ena +Chromosome ena gene 3004745 3005650 . - . ID=gene:Rv2688c;biotype=protein_coding;description=Antibiotic-transport ATP-binding protein ABC transporter;gene_id=Rv2688c;logic_name=ena Chromosome ena mRNA 3004745 3005650 . - . ID=transcript:Rv2688c;Parent=gene:Rv2688c;biotype=protein_coding;transcript_id=Rv2688c Chromosome ena exon 3004745 3005650 . - . Parent=transcript:Rv2688c;Name=Rv2688c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2688c-1;rank=1 Chromosome ena CDS 3004745 3005650 . - 0 ID=CDS:Rv2688c;Parent=transcript:Rv2688c;protein_id=Rv2688c ### -Chromosome ena gene 3005845 3007062 . - . ID=gene:Rv2689c;biotype=protein_coding;description=Conserved alanine and valine and glycine rich protein;gene_id=Rv2689c;logic_name=ena +Chromosome ena gene 3005845 3007062 . - . ID=gene:Rv2689c;biotype=protein_coding;description=Conserved alanine and valine and glycine rich protein;gene_id=Rv2689c;logic_name=ena Chromosome ena mRNA 3005845 3007062 . - . ID=transcript:Rv2689c;Parent=gene:Rv2689c;biotype=protein_coding;transcript_id=Rv2689c Chromosome ena exon 3005845 3007062 . - . Parent=transcript:Rv2689c;Name=Rv2689c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2689c-1;rank=1 Chromosome ena CDS 3005845 3007062 . - 0 ID=CDS:Rv2689c;Parent=transcript:Rv2689c;protein_id=Rv2689c ### -Chromosome ena gene 3007236 3009209 . - . ID=gene:Rv2690c;biotype=protein_coding;description=Probable conserved integral membrane alanine and valine and leucine rich protein;gene_id=Rv2690c;logic_name=ena +Chromosome ena gene 3007236 3009209 . - . ID=gene:Rv2690c;biotype=protein_coding;description=Probable conserved integral membrane alanine and valine and leucine rich protein;gene_id=Rv2690c;logic_name=ena Chromosome ena mRNA 3007236 3009209 . - . ID=transcript:Rv2690c;Parent=gene:Rv2690c;biotype=protein_coding;transcript_id=Rv2690c Chromosome ena exon 3007236 3009209 . - . Parent=transcript:Rv2690c;Name=Rv2690c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2690c-1;rank=1 Chromosome ena CDS 3007236 3009209 . - 0 ID=CDS:Rv2690c;Parent=transcript:Rv2690c;protein_id=Rv2690c ### -Chromosome ena gene 3009344 3010027 . + . ID=gene:Rv2691;Name=ceoB;biotype=protein_coding;description=TRK system potassium uptake protein CeoB;gene_id=Rv2691;logic_name=ena +Chromosome ena gene 3009344 3010027 . + . ID=gene:Rv2691;Name=ceoB;biotype=protein_coding;description=TRK system potassium uptake protein CeoB;gene_id=Rv2691;logic_name=ena Chromosome ena mRNA 3009344 3010027 . + . ID=transcript:Rv2691;Parent=gene:Rv2691;Name=ceoB-1;biotype=protein_coding;transcript_id=Rv2691 Chromosome ena exon 3009344 3010027 . + . Parent=transcript:Rv2691;Name=Rv2691-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2691-1;rank=1 Chromosome ena CDS 3009344 3010027 . + 0 ID=CDS:Rv2691;Parent=transcript:Rv2691;protein_id=Rv2691 ### -Chromosome ena gene 3010024 3010686 . + . ID=gene:Rv2692;Name=ceoC;biotype=protein_coding;description=TRK system potassium uptake protein CeoC;gene_id=Rv2692;logic_name=ena +Chromosome ena gene 3010024 3010686 . + . ID=gene:Rv2692;Name=ceoC;biotype=protein_coding;description=TRK system potassium uptake protein CeoC;gene_id=Rv2692;logic_name=ena Chromosome ena mRNA 3010024 3010686 . + . ID=transcript:Rv2692;Parent=gene:Rv2692;Name=ceoC-1;biotype=protein_coding;transcript_id=Rv2692 Chromosome ena exon 3010024 3010686 . + . Parent=transcript:Rv2692;Name=Rv2692-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2692-1;rank=1 Chromosome ena CDS 3010024 3010686 . + 0 ID=CDS:Rv2692;Parent=transcript:Rv2692;protein_id=Rv2692 ### -Chromosome ena gene 3010697 3011368 . - . ID=gene:Rv2693c;biotype=protein_coding;description=Probable conserved integral membrane alanine and leucine rich protein;gene_id=Rv2693c;logic_name=ena +Chromosome ena gene 3010697 3011368 . - . ID=gene:Rv2693c;biotype=protein_coding;description=Probable conserved integral membrane alanine and leucine rich protein;gene_id=Rv2693c;logic_name=ena Chromosome ena mRNA 3010697 3011368 . - . ID=transcript:Rv2693c;Parent=gene:Rv2693c;biotype=protein_coding;transcript_id=Rv2693c Chromosome ena exon 3010697 3011368 . - . Parent=transcript:Rv2693c;Name=Rv2693c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2693c-1;rank=1 Chromosome ena CDS 3010697 3011368 . - 0 ID=CDS:Rv2693c;Parent=transcript:Rv2693c;protein_id=Rv2693c ### -Chromosome ena gene 3011399 3011767 . - . ID=gene:Rv2694c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2694c;logic_name=ena +Chromosome ena gene 3011399 3011767 . - . ID=gene:Rv2694c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2694c;logic_name=ena Chromosome ena mRNA 3011399 3011767 . - . ID=transcript:Rv2694c;Parent=gene:Rv2694c;biotype=protein_coding;transcript_id=Rv2694c Chromosome ena exon 3011399 3011767 . - . Parent=transcript:Rv2694c;Name=Rv2694c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2694c-1;rank=1 Chromosome ena CDS 3011399 3011767 . - 0 ID=CDS:Rv2694c;Parent=transcript:Rv2694c;protein_id=Rv2694c ### -Chromosome ena gene 3011916 3012623 . + . ID=gene:Rv2695;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2695;logic_name=ena +Chromosome ena gene 3011916 3012623 . + . ID=gene:Rv2695;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2695;logic_name=ena Chromosome ena mRNA 3011916 3012623 . + . ID=transcript:Rv2695;Parent=gene:Rv2695;biotype=protein_coding;transcript_id=Rv2695 Chromosome ena exon 3011916 3012623 . + . Parent=transcript:Rv2695;Name=Rv2695-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2695-1;rank=1 Chromosome ena CDS 3011916 3012623 . + 0 ID=CDS:Rv2695;Parent=transcript:Rv2695;protein_id=Rv2695 ### -Chromosome ena gene 3012829 3013608 . - . ID=gene:Rv2696c;biotype=protein_coding;description=Conserved alanine and glycine and valine rich protein;gene_id=Rv2696c;logic_name=ena +Chromosome ena gene 3012829 3013608 . - . ID=gene:Rv2696c;biotype=protein_coding;description=Conserved alanine and glycine and valine rich protein;gene_id=Rv2696c;logic_name=ena Chromosome ena mRNA 3012829 3013608 . - . ID=transcript:Rv2696c;Parent=gene:Rv2696c;biotype=protein_coding;transcript_id=Rv2696c Chromosome ena exon 3012829 3013608 . - . Parent=transcript:Rv2696c;Name=Rv2696c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2696c-1;rank=1 Chromosome ena CDS 3012829 3013608 . - 0 ID=CDS:Rv2696c;Parent=transcript:Rv2696c;protein_id=Rv2696c ### -Chromosome ena gene 3013683 3014147 . - . ID=gene:Rv2697c;Name=dut;biotype=protein_coding;description=Probable deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (dUTPase) (dUTP pyrophosphatase) (deoxyuridine 5'-triphosphatase) (dUTP diphosphatase) (deoxyuridine-triphosphatase);gene_id=Rv2697c;logic_name=ena +Chromosome ena gene 3013683 3014147 . - . ID=gene:Rv2697c;Name=dut;biotype=protein_coding;description=Probable deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (dUTPase) (dUTP pyrophosphatase) (deoxyuridine 5'-triphosphatase) (dUTP diphosphatase) (deoxyuridine-triphosphatase);gene_id=Rv2697c;logic_name=ena Chromosome ena mRNA 3013683 3014147 . - . ID=transcript:Rv2697c;Parent=gene:Rv2697c;Name=dut-1;biotype=protein_coding;transcript_id=Rv2697c Chromosome ena exon 3013683 3014147 . - . Parent=transcript:Rv2697c;Name=Rv2697c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2697c-1;rank=1 Chromosome ena CDS 3013683 3014147 . - 0 ID=CDS:Rv2697c;Parent=transcript:Rv2697c;protein_id=Rv2697c ### -Chromosome ena gene 3014173 3014658 . + . ID=gene:Rv2698;biotype=protein_coding;description=Probable conserved alanine rich transmembrane protein;gene_id=Rv2698;logic_name=ena +Chromosome ena gene 3014173 3014658 . + . ID=gene:Rv2698;biotype=protein_coding;description=Probable conserved alanine rich transmembrane protein;gene_id=Rv2698;logic_name=ena Chromosome ena mRNA 3014173 3014658 . + . ID=transcript:Rv2698;Parent=gene:Rv2698;biotype=protein_coding;transcript_id=Rv2698 Chromosome ena exon 3014173 3014658 . + . Parent=transcript:Rv2698;Name=Rv2698-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2698-1;rank=1 Chromosome ena CDS 3014173 3014658 . + 0 ID=CDS:Rv2698;Parent=transcript:Rv2698;protein_id=Rv2698 ### -Chromosome ena gene 3014663 3014965 . - . ID=gene:Rv2699c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2699c;logic_name=ena +Chromosome ena gene 3014663 3014965 . - . ID=gene:Rv2699c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2699c;logic_name=ena Chromosome ena mRNA 3014663 3014965 . - . ID=transcript:Rv2699c;Parent=gene:Rv2699c;biotype=protein_coding;transcript_id=Rv2699c Chromosome ena exon 3014663 3014965 . - . Parent=transcript:Rv2699c;Name=Rv2699c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2699c-1;rank=1 Chromosome ena CDS 3014663 3014965 . - 0 ID=CDS:Rv2699c;Parent=transcript:Rv2699c;protein_id=Rv2699c ### -Chromosome ena gene 3015203 3015853 . + . ID=gene:Rv2700;biotype=protein_coding;description=Possible conserved secreted alanine rich protein;gene_id=Rv2700;logic_name=ena +Chromosome ena gene 3015203 3015853 . + . ID=gene:Rv2700;biotype=protein_coding;description=Possible conserved secreted alanine rich protein;gene_id=Rv2700;logic_name=ena Chromosome ena mRNA 3015203 3015853 . + . ID=transcript:Rv2700;Parent=gene:Rv2700;biotype=protein_coding;transcript_id=Rv2700 Chromosome ena exon 3015203 3015853 . + . Parent=transcript:Rv2700;Name=Rv2700-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2700-1;rank=1 Chromosome ena CDS 3015203 3015853 . + 0 ID=CDS:Rv2700;Parent=transcript:Rv2700;protein_id=Rv2700 ### -Chromosome ena gene 3015863 3016735 . - . ID=gene:Rv2701c;Name=suhB;biotype=protein_coding;description=Inositol-1-monophosphatase SuhB;gene_id=Rv2701c;logic_name=ena +Chromosome ena gene 3015863 3016735 . - . ID=gene:Rv2701c;Name=suhB;biotype=protein_coding;description=Inositol-1-monophosphatase SuhB;gene_id=Rv2701c;logic_name=ena Chromosome ena mRNA 3015863 3016735 . - . ID=transcript:Rv2701c;Parent=gene:Rv2701c;Name=suhB-1;biotype=protein_coding;transcript_id=Rv2701c Chromosome ena exon 3015863 3016735 . - . Parent=transcript:Rv2701c;Name=Rv2701c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2701c-1;rank=1 Chromosome ena CDS 3015863 3016735 . - 0 ID=CDS:Rv2701c;Parent=transcript:Rv2701c;protein_id=Rv2701c ### -Chromosome ena gene 3016858 3017655 . + . ID=gene:Rv2702;Name=ppgK;biotype=protein_coding;description=Polyphosphate glucokinase PpgK (polyphosphate-glucose phosphotransferase);gene_id=Rv2702;logic_name=ena +Chromosome ena gene 3016858 3017655 . + . ID=gene:Rv2702;Name=ppgK;biotype=protein_coding;description=Polyphosphate glucokinase PpgK (polyphosphate-glucose phosphotransferase);gene_id=Rv2702;logic_name=ena Chromosome ena mRNA 3016858 3017655 . + . ID=transcript:Rv2702;Parent=gene:Rv2702;Name=ppgK-1;biotype=protein_coding;transcript_id=Rv2702 Chromosome ena exon 3016858 3017655 . + . Parent=transcript:Rv2702;Name=Rv2702-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2702-1;rank=1 Chromosome ena CDS 3016858 3017655 . + 0 ID=CDS:Rv2702;Parent=transcript:Rv2702;protein_id=Rv2702 ### -Chromosome ena gene 3017835 3019421 . + . ID=gene:Rv2703;Name=sigA;biotype=protein_coding;description=RNA polymerase sigma factor SigA (sigma-A);gene_id=Rv2703;logic_name=ena +Chromosome ena gene 3017835 3019421 . + . ID=gene:Rv2703;Name=sigA;biotype=protein_coding;description=RNA polymerase sigma factor SigA (sigma-A);gene_id=Rv2703;logic_name=ena Chromosome ena mRNA 3017835 3019421 . + . ID=transcript:Rv2703;Parent=gene:Rv2703;Name=sigA-1;biotype=protein_coding;transcript_id=Rv2703 Chromosome ena exon 3017835 3019421 . + . Parent=transcript:Rv2703;Name=Rv2703-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2703-1;rank=1 Chromosome ena CDS 3017835 3019421 . + 0 ID=CDS:Rv2703;Parent=transcript:Rv2703;protein_id=Rv2703 ### -Chromosome ena gene 3019458 3019886 . + . ID=gene:Rv2704;biotype=protein_coding;description=Conserved protein;gene_id=Rv2704;logic_name=ena +Chromosome ena gene 3019458 3019886 . + . ID=gene:Rv2704;biotype=protein_coding;description=Conserved protein;gene_id=Rv2704;logic_name=ena Chromosome ena mRNA 3019458 3019886 . + . ID=transcript:Rv2704;Parent=gene:Rv2704;biotype=protein_coding;transcript_id=Rv2704 Chromosome ena exon 3019458 3019886 . + . Parent=transcript:Rv2704;Name=Rv2704-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2704-1;rank=1 Chromosome ena CDS 3019458 3019886 . + 0 ID=CDS:Rv2704;Parent=transcript:Rv2704;protein_id=Rv2704 ### -Chromosome ena gene 3019814 3020203 . - . ID=gene:Rv2705c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2705c;logic_name=ena +Chromosome ena gene 3019814 3020203 . - . ID=gene:Rv2705c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2705c;logic_name=ena Chromosome ena mRNA 3019814 3020203 . - . ID=transcript:Rv2705c;Parent=gene:Rv2705c;biotype=protein_coding;transcript_id=Rv2705c Chromosome ena exon 3019814 3020203 . - . Parent=transcript:Rv2705c;Name=Rv2705c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2705c-1;rank=1 Chromosome ena CDS 3019814 3020203 . - 0 ID=CDS:Rv2705c;Parent=transcript:Rv2705c;protein_id=Rv2705c ### -Chromosome ena gene 3020200 3020457 . - . ID=gene:Rv2706c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2706c;logic_name=ena +Chromosome ena gene 3020200 3020457 . - . ID=gene:Rv2706c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2706c;logic_name=ena Chromosome ena mRNA 3020200 3020457 . - . ID=transcript:Rv2706c;Parent=gene:Rv2706c;biotype=protein_coding;transcript_id=Rv2706c Chromosome ena exon 3020200 3020457 . - . Parent=transcript:Rv2706c;Name=Rv2706c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2706c-1;rank=1 Chromosome ena CDS 3020200 3020457 . - 0 ID=CDS:Rv2706c;Parent=transcript:Rv2706c;protein_id=Rv2706c ### -Chromosome ena gene 3020573 3021547 . + . ID=gene:Rv2707;biotype=protein_coding;description=Probable conserved transmembrane alanine and leucine rich protein;gene_id=Rv2707;logic_name=ena +Chromosome ena gene 3020573 3021547 . + . ID=gene:Rv2707;biotype=protein_coding;description=Probable conserved transmembrane alanine and leucine rich protein;gene_id=Rv2707;logic_name=ena Chromosome ena mRNA 3020573 3021547 . + . ID=transcript:Rv2707;Parent=gene:Rv2707;biotype=protein_coding;transcript_id=Rv2707 Chromosome ena exon 3020573 3021547 . + . Parent=transcript:Rv2707;Name=Rv2707-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2707-1;rank=1 Chromosome ena CDS 3020573 3021547 . + 0 ID=CDS:Rv2707;Parent=transcript:Rv2707;protein_id=Rv2707 ### -Chromosome ena gene 3021548 3021796 . - . ID=gene:Rv2708c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2708c;logic_name=ena +Chromosome ena gene 3021548 3021796 . - . ID=gene:Rv2708c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2708c;logic_name=ena Chromosome ena mRNA 3021548 3021796 . - . ID=transcript:Rv2708c;Parent=gene:Rv2708c;biotype=protein_coding;transcript_id=Rv2708c Chromosome ena exon 3021548 3021796 . - . Parent=transcript:Rv2708c;Name=Rv2708c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2708c-1;rank=1 Chromosome ena CDS 3021548 3021796 . - 0 ID=CDS:Rv2708c;Parent=transcript:Rv2708c;protein_id=Rv2708c ### -Chromosome ena gene 3021839 3022285 . + . ID=gene:Rv2709;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2709;logic_name=ena +Chromosome ena gene 3021839 3022285 . + . ID=gene:Rv2709;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2709;logic_name=ena Chromosome ena mRNA 3021839 3022285 . + . ID=transcript:Rv2709;Parent=gene:Rv2709;biotype=protein_coding;transcript_id=Rv2709 Chromosome ena exon 3021839 3022285 . + . Parent=transcript:Rv2709;Name=Rv2709-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2709-1;rank=1 Chromosome ena CDS 3021839 3022285 . + 0 ID=CDS:Rv2709;Parent=transcript:Rv2709;protein_id=Rv2709 ### -Chromosome ena gene 3022461 3023432 . + . ID=gene:Rv2710;Name=sigB;biotype=protein_coding;description=RNA polymerase sigma factor SigB;gene_id=Rv2710;logic_name=ena +Chromosome ena gene 3022461 3023432 . + . ID=gene:Rv2710;Name=sigB;biotype=protein_coding;description=RNA polymerase sigma factor SigB;gene_id=Rv2710;logic_name=ena Chromosome ena mRNA 3022461 3023432 . + . ID=transcript:Rv2710;Parent=gene:Rv2710;Name=sigB-1;biotype=protein_coding;transcript_id=Rv2710 Chromosome ena exon 3022461 3023432 . + . Parent=transcript:Rv2710;Name=Rv2710-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2710-1;rank=1 Chromosome ena CDS 3022461 3023432 . + 0 ID=CDS:Rv2710;Parent=transcript:Rv2710;protein_id=Rv2710 ### -Chromosome ena gene 3023565 3024257 . + . ID=gene:Rv2711;Name=ideR;biotype=protein_coding;description=Iron-dependent repressor and activator IdeR;gene_id=Rv2711;logic_name=ena +Chromosome ena gene 3023565 3024257 . + . ID=gene:Rv2711;Name=ideR;biotype=protein_coding;description=Iron-dependent repressor and activator IdeR;gene_id=Rv2711;logic_name=ena Chromosome ena mRNA 3023565 3024257 . + . ID=transcript:Rv2711;Parent=gene:Rv2711;Name=ideR-1;biotype=protein_coding;transcript_id=Rv2711 Chromosome ena exon 3023565 3024257 . + . Parent=transcript:Rv2711;Name=Rv2711-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2711-1;rank=1 Chromosome ena CDS 3023565 3024257 . + 0 ID=CDS:Rv2711;Parent=transcript:Rv2711;protein_id=Rv2711 ### -Chromosome ena gene 3024270 3025328 . - . ID=gene:Rv2712c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2712c;logic_name=ena +Chromosome ena gene 3024270 3025328 . - . ID=gene:Rv2712c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2712c;logic_name=ena Chromosome ena mRNA 3024270 3025328 . - . ID=transcript:Rv2712c;Parent=gene:Rv2712c;biotype=protein_coding;transcript_id=Rv2712c Chromosome ena exon 3024270 3025328 . - . Parent=transcript:Rv2712c;Name=Rv2712c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2712c-1;rank=1 Chromosome ena CDS 3024270 3025328 . - 0 ID=CDS:Rv2712c;Parent=transcript:Rv2712c;protein_id=Rv2712c ### -Chromosome ena gene 3025441 3026847 . + . ID=gene:Rv2713;Name=sthA;biotype=protein_coding;description=Probable soluble pyridine nucleotide transhydrogenase SthA (STH) (NAD(P)(+) transhydrogenase [B-specific]) (nicotinamide nucleotide transhydrogenase);gene_id=Rv2713;logic_name=ena +Chromosome ena gene 3025441 3026847 . + . ID=gene:Rv2713;Name=sthA;biotype=protein_coding;description=Probable soluble pyridine nucleotide transhydrogenase SthA (STH) (NAD(P)(+) transhydrogenase [B-specific]) (nicotinamide nucleotide transhydrogenase);gene_id=Rv2713;logic_name=ena Chromosome ena mRNA 3025441 3026847 . + . ID=transcript:Rv2713;Parent=gene:Rv2713;Name=sthA-1;biotype=protein_coding;transcript_id=Rv2713 Chromosome ena exon 3025441 3026847 . + . Parent=transcript:Rv2713;Name=Rv2713-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2713-1;rank=1 Chromosome ena CDS 3025441 3026847 . + 0 ID=CDS:Rv2713;Parent=transcript:Rv2713;protein_id=Rv2713 ### -Chromosome ena gene 3027065 3028039 . + . ID=gene:Rv2714;biotype=protein_coding;description=Conserved alanine and leucine rich protein;gene_id=Rv2714;logic_name=ena +Chromosome ena gene 3027065 3028039 . + . ID=gene:Rv2714;biotype=protein_coding;description=Conserved alanine and leucine rich protein;gene_id=Rv2714;logic_name=ena Chromosome ena mRNA 3027065 3028039 . + . ID=transcript:Rv2714;Parent=gene:Rv2714;biotype=protein_coding;transcript_id=Rv2714 Chromosome ena exon 3027065 3028039 . + . Parent=transcript:Rv2714;Name=Rv2714-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2714-1;rank=1 Chromosome ena CDS 3027065 3028039 . + 0 ID=CDS:Rv2714;Parent=transcript:Rv2714;protein_id=Rv2714 ### -Chromosome ena gene 3028098 3029123 . + . ID=gene:Rv2715;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv2715;logic_name=ena +Chromosome ena gene 3028098 3029123 . + . ID=gene:Rv2715;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv2715;logic_name=ena Chromosome ena mRNA 3028098 3029123 . + . ID=transcript:Rv2715;Parent=gene:Rv2715;biotype=protein_coding;transcript_id=Rv2715 Chromosome ena exon 3028098 3029123 . + . Parent=transcript:Rv2715;Name=Rv2715-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2715-1;rank=1 Chromosome ena CDS 3028098 3029123 . + 0 ID=CDS:Rv2715;Parent=transcript:Rv2715;protein_id=Rv2715 ### -Chromosome ena gene 3029172 3029858 . + . ID=gene:Rv2716;biotype=protein_coding;description=Conserved protein;gene_id=Rv2716;logic_name=ena +Chromosome ena gene 3029172 3029858 . + . ID=gene:Rv2716;biotype=protein_coding;description=Conserved protein;gene_id=Rv2716;logic_name=ena Chromosome ena mRNA 3029172 3029858 . + . ID=transcript:Rv2716;Parent=gene:Rv2716;biotype=protein_coding;transcript_id=Rv2716 Chromosome ena exon 3029172 3029858 . + . Parent=transcript:Rv2716;Name=Rv2716-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2716-1;rank=1 Chromosome ena CDS 3029172 3029858 . + 0 ID=CDS:Rv2716;Parent=transcript:Rv2716;protein_id=Rv2716 ### -Chromosome ena gene 3029867 3030361 . - . ID=gene:Rv2717c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2717c;logic_name=ena +Chromosome ena gene 3029867 3030361 . - . ID=gene:Rv2717c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2717c;logic_name=ena Chromosome ena mRNA 3029867 3030361 . - . ID=transcript:Rv2717c;Parent=gene:Rv2717c;biotype=protein_coding;transcript_id=Rv2717c Chromosome ena exon 3029867 3030361 . - . Parent=transcript:Rv2717c;Name=Rv2717c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2717c-1;rank=1 Chromosome ena CDS 3029867 3030361 . - 0 ID=CDS:Rv2717c;Parent=transcript:Rv2717c;protein_id=Rv2717c ### -Chromosome ena gene 3030413 3030877 . - . ID=gene:Rv2718c;Name=nrdR;biotype=protein_coding;description=Probable transcriptional regulatory protein NrdR;gene_id=Rv2718c;logic_name=ena +Chromosome ena gene 3030413 3030877 . - . ID=gene:Rv2718c;Name=nrdR;biotype=protein_coding;description=Probable transcriptional regulatory protein NrdR;gene_id=Rv2718c;logic_name=ena Chromosome ena mRNA 3030413 3030877 . - . ID=transcript:Rv2718c;Parent=gene:Rv2718c;Name=nrdR-1;biotype=protein_coding;transcript_id=Rv2718c Chromosome ena exon 3030413 3030877 . - . Parent=transcript:Rv2718c;Name=Rv2718c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2718c-1;rank=1 Chromosome ena CDS 3030413 3030877 . - 0 ID=CDS:Rv2718c;Parent=transcript:Rv2718c;protein_id=Rv2718c ### -Chromosome ena gene 3031040 3031537 . - . ID=gene:Rv2719c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2719c;logic_name=ena +Chromosome ena gene 3031040 3031537 . - . ID=gene:Rv2719c;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv2719c;logic_name=ena Chromosome ena mRNA 3031040 3031537 . - . ID=transcript:Rv2719c;Parent=gene:Rv2719c;biotype=protein_coding;transcript_id=Rv2719c Chromosome ena exon 3031040 3031537 . - . Parent=transcript:Rv2719c;Name=Rv2719c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2719c-1;rank=1 Chromosome ena CDS 3031040 3031537 . - 0 ID=CDS:Rv2719c;Parent=transcript:Rv2719c;protein_id=Rv2719c ### -Chromosome ena gene 3031788 3032498 . + . ID=gene:Rv2720;Name=lexA;biotype=protein_coding;description=Repressor LexA;gene_id=Rv2720;logic_name=ena +Chromosome ena gene 3031788 3032498 . + . ID=gene:Rv2720;Name=lexA;biotype=protein_coding;description=Repressor LexA;gene_id=Rv2720;logic_name=ena Chromosome ena mRNA 3031788 3032498 . + . ID=transcript:Rv2720;Parent=gene:Rv2720;Name=lexA-1;biotype=protein_coding;transcript_id=Rv2720 Chromosome ena exon 3031788 3032498 . + . Parent=transcript:Rv2720;Name=Rv2720-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2720-1;rank=1 Chromosome ena CDS 3031788 3032498 . + 0 ID=CDS:Rv2720;Parent=transcript:Rv2720;protein_id=Rv2720 ### -Chromosome ena gene 3032520 3034619 . - . ID=gene:Rv2721c;biotype=protein_coding;description=Possible conserved transmembrane alanine and glycine rich protein;gene_id=Rv2721c;logic_name=ena +Chromosome ena gene 3032520 3034619 . - . ID=gene:Rv2721c;biotype=protein_coding;description=Possible conserved transmembrane alanine and glycine rich protein;gene_id=Rv2721c;logic_name=ena Chromosome ena mRNA 3032520 3034619 . - . ID=transcript:Rv2721c;Parent=gene:Rv2721c;biotype=protein_coding;transcript_id=Rv2721c Chromosome ena exon 3032520 3034619 . - . Parent=transcript:Rv2721c;Name=Rv2721c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2721c-1;rank=1 Chromosome ena CDS 3032520 3034619 . - 0 ID=CDS:Rv2721c;Parent=transcript:Rv2721c;protein_id=Rv2721c ### -Chromosome ena gene 3034635 3034883 . + . ID=gene:Rv2722;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2722;logic_name=ena +Chromosome ena gene 3034635 3034883 . + . ID=gene:Rv2722;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2722;logic_name=ena Chromosome ena mRNA 3034635 3034883 . + . ID=transcript:Rv2722;Parent=gene:Rv2722;biotype=protein_coding;transcript_id=Rv2722 Chromosome ena exon 3034635 3034883 . + . Parent=transcript:Rv2722;Name=Rv2722-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2722-1;rank=1 Chromosome ena CDS 3034635 3034883 . + 0 ID=CDS:Rv2722;Parent=transcript:Rv2722;protein_id=Rv2722 ### -Chromosome ena gene 3034909 3036102 . + . ID=gene:Rv2723;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2723;logic_name=ena +Chromosome ena gene 3034909 3036102 . + . ID=gene:Rv2723;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2723;logic_name=ena Chromosome ena mRNA 3034909 3036102 . + . ID=transcript:Rv2723;Parent=gene:Rv2723;biotype=protein_coding;transcript_id=Rv2723 Chromosome ena exon 3034909 3036102 . + . Parent=transcript:Rv2723;Name=Rv2723-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2723-1;rank=1 Chromosome ena CDS 3034909 3036102 . + 0 ID=CDS:Rv2723;Parent=transcript:Rv2723;protein_id=Rv2723 ### -Chromosome ena gene 3036131 3037291 . - . ID=gene:Rv2724c;Name=fadE20;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE20;gene_id=Rv2724c;logic_name=ena +Chromosome ena gene 3036131 3037291 . - . ID=gene:Rv2724c;Name=fadE20;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE20;gene_id=Rv2724c;logic_name=ena Chromosome ena mRNA 3036131 3037291 . - . ID=transcript:Rv2724c;Parent=gene:Rv2724c;Name=fadE20-1;biotype=protein_coding;transcript_id=Rv2724c Chromosome ena exon 3036131 3037291 . - . Parent=transcript:Rv2724c;Name=Rv2724c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2724c-1;rank=1 Chromosome ena CDS 3036131 3037291 . - 0 ID=CDS:Rv2724c;Parent=transcript:Rv2724c;protein_id=Rv2724c ### -Chromosome ena gene 3037427 3038914 . - . ID=gene:Rv2725c;Name=hflX;biotype=protein_coding;description=Probable GTP-binding protein HflX;gene_id=Rv2725c;logic_name=ena +Chromosome ena gene 3037427 3038914 . - . ID=gene:Rv2725c;Name=hflX;biotype=protein_coding;description=Probable GTP-binding protein HflX;gene_id=Rv2725c;logic_name=ena Chromosome ena mRNA 3037427 3038914 . - . ID=transcript:Rv2725c;Parent=gene:Rv2725c;Name=hflX-1;biotype=protein_coding;transcript_id=Rv2725c Chromosome ena exon 3037427 3038914 . - . Parent=transcript:Rv2725c;Name=Rv2725c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2725c-1;rank=1 Chromosome ena CDS 3037427 3038914 . - 0 ID=CDS:Rv2725c;Parent=transcript:Rv2725c;protein_id=Rv2725c ### -Chromosome ena gene 3038931 3039800 . - . ID=gene:Rv2726c;Name=dapF;biotype=protein_coding;description=Probable diaminopimelate epimerase DapF (DAP epimerase);gene_id=Rv2726c;logic_name=ena +Chromosome ena gene 3038931 3039800 . - . ID=gene:Rv2726c;Name=dapF;biotype=protein_coding;description=Probable diaminopimelate epimerase DapF (DAP epimerase);gene_id=Rv2726c;logic_name=ena Chromosome ena mRNA 3038931 3039800 . - . ID=transcript:Rv2726c;Parent=gene:Rv2726c;Name=dapF-1;biotype=protein_coding;transcript_id=Rv2726c Chromosome ena exon 3038931 3039800 . - . Parent=transcript:Rv2726c;Name=Rv2726c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2726c-1;rank=1 Chromosome ena CDS 3038931 3039800 . - 0 ID=CDS:Rv2726c;Parent=transcript:Rv2726c;protein_id=Rv2726c ### -Chromosome ena gene 3039825 3040769 . - . ID=gene:Rv2727c;Name=miaA;biotype=protein_coding;description=Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT);gene_id=Rv2727c;logic_name=ena +Chromosome ena gene 3039825 3040769 . - . ID=gene:Rv2727c;Name=miaA;biotype=protein_coding;description=Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT);gene_id=Rv2727c;logic_name=ena Chromosome ena mRNA 3039825 3040769 . - . ID=transcript:Rv2727c;Parent=gene:Rv2727c;Name=miaA-1;biotype=protein_coding;transcript_id=Rv2727c Chromosome ena exon 3039825 3040769 . - . Parent=transcript:Rv2727c;Name=Rv2727c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2727c-1;rank=1 Chromosome ena CDS 3039825 3040769 . - 0 ID=CDS:Rv2727c;Parent=transcript:Rv2727c;protein_id=Rv2727c ### -Chromosome ena gene 3040766 3041461 . - . ID=gene:Rv2728c;biotype=protein_coding;description=Conserved alanine rich protein;gene_id=Rv2728c;logic_name=ena +Chromosome ena gene 3040766 3041461 . - . ID=gene:Rv2728c;biotype=protein_coding;description=Conserved alanine rich protein;gene_id=Rv2728c;logic_name=ena Chromosome ena mRNA 3040766 3041461 . - . ID=transcript:Rv2728c;Parent=gene:Rv2728c;biotype=protein_coding;transcript_id=Rv2728c Chromosome ena exon 3040766 3041461 . - . Parent=transcript:Rv2728c;Name=Rv2728c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2728c-1;rank=1 Chromosome ena CDS 3040766 3041461 . - 0 ID=CDS:Rv2728c;Parent=transcript:Rv2728c;protein_id=Rv2728c ### -Chromosome ena gene 3041570 3042475 . - . ID=gene:Rv2729c;biotype=protein_coding;description=Probable conserved integral membrane alanine valine and leucine rich protein;gene_id=Rv2729c;logic_name=ena +Chromosome ena gene 3041570 3042475 . - . ID=gene:Rv2729c;biotype=protein_coding;description=Probable conserved integral membrane alanine valine and leucine rich protein;gene_id=Rv2729c;logic_name=ena Chromosome ena mRNA 3041570 3042475 . - . ID=transcript:Rv2729c;Parent=gene:Rv2729c;biotype=protein_coding;transcript_id=Rv2729c Chromosome ena exon 3041570 3042475 . - . Parent=transcript:Rv2729c;Name=Rv2729c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2729c-1;rank=1 Chromosome ena CDS 3041570 3042475 . - 0 ID=CDS:Rv2729c;Parent=transcript:Rv2729c;protein_id=Rv2729c ### -Chromosome ena gene 3042542 3043018 . + . ID=gene:Rv2730;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2730;logic_name=ena +Chromosome ena gene 3042542 3043018 . + . ID=gene:Rv2730;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2730;logic_name=ena Chromosome ena mRNA 3042542 3043018 . + . ID=transcript:Rv2730;Parent=gene:Rv2730;biotype=protein_coding;transcript_id=Rv2730 Chromosome ena exon 3042542 3043018 . + . Parent=transcript:Rv2730;Name=Rv2730-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2730-1;rank=1 Chromosome ena CDS 3042542 3043018 . + 0 ID=CDS:Rv2730;Parent=transcript:Rv2730;protein_id=Rv2730 ### -Chromosome ena gene 3043026 3044378 . + . ID=gene:Rv2731;biotype=protein_coding;description=Conserved alanine and arginine rich protein;gene_id=Rv2731;logic_name=ena +Chromosome ena gene 3043026 3044378 . + . ID=gene:Rv2731;biotype=protein_coding;description=Conserved alanine and arginine rich protein;gene_id=Rv2731;logic_name=ena Chromosome ena mRNA 3043026 3044378 . + . ID=transcript:Rv2731;Parent=gene:Rv2731;biotype=protein_coding;transcript_id=Rv2731 Chromosome ena exon 3043026 3044378 . + . Parent=transcript:Rv2731;Name=Rv2731-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2731-1;rank=1 Chromosome ena CDS 3043026 3044378 . + 0 ID=CDS:Rv2731;Parent=transcript:Rv2731;protein_id=Rv2731 ### -Chromosome ena gene 3044375 3044989 . - . ID=gene:Rv2732c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2732c;logic_name=ena +Chromosome ena gene 3044375 3044989 . - . ID=gene:Rv2732c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2732c;logic_name=ena Chromosome ena mRNA 3044375 3044989 . - . ID=transcript:Rv2732c;Parent=gene:Rv2732c;biotype=protein_coding;transcript_id=Rv2732c Chromosome ena exon 3044375 3044989 . - . Parent=transcript:Rv2732c;Name=Rv2732c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2732c-1;rank=1 Chromosome ena CDS 3044375 3044989 . - 0 ID=CDS:Rv2732c;Parent=transcript:Rv2732c;protein_id=Rv2732c ### -Chromosome ena gene 3044986 3046524 . - . ID=gene:Rv2733c;biotype=protein_coding;description=Conserved hypothetical alanine%2C arginine-rich protein;gene_id=Rv2733c;logic_name=ena +Chromosome ena gene 3044986 3046524 . - . ID=gene:Rv2733c;biotype=protein_coding;description=Conserved hypothetical alanine%2C arginine-rich protein;gene_id=Rv2733c;logic_name=ena Chromosome ena mRNA 3044986 3046524 . - . ID=transcript:Rv2733c;Parent=gene:Rv2733c;biotype=protein_coding;transcript_id=Rv2733c Chromosome ena exon 3044986 3046524 . - . Parent=transcript:Rv2733c;Name=Rv2733c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2733c-1;rank=1 Chromosome ena CDS 3044986 3046524 . - 0 ID=CDS:Rv2733c;Parent=transcript:Rv2733c;protein_id=Rv2733c ### -Chromosome ena gene 3046821 3047675 . + . ID=gene:Rv2734;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2734;logic_name=ena +Chromosome ena gene 3046821 3047675 . + . ID=gene:Rv2734;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2734;logic_name=ena Chromosome ena mRNA 3046821 3047675 . + . ID=transcript:Rv2734;Parent=gene:Rv2734;biotype=protein_coding;transcript_id=Rv2734 Chromosome ena exon 3046821 3047675 . + . Parent=transcript:Rv2734;Name=Rv2734-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2734-1;rank=1 Chromosome ena CDS 3046821 3047675 . + 0 ID=CDS:Rv2734;Parent=transcript:Rv2734;protein_id=Rv2734 ### -Chromosome ena gene 3047560 3048552 . - . ID=gene:Rv2735c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2735c;logic_name=ena +Chromosome ena gene 3047560 3048552 . - . ID=gene:Rv2735c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2735c;logic_name=ena Chromosome ena mRNA 3047560 3048552 . - . ID=transcript:Rv2735c;Parent=gene:Rv2735c;biotype=protein_coding;transcript_id=Rv2735c Chromosome ena exon 3047560 3048552 . - . Parent=transcript:Rv2735c;Name=Rv2735c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2735c-1;rank=1 Chromosome ena CDS 3047560 3048552 . - 0 ID=CDS:Rv2735c;Parent=transcript:Rv2735c;protein_id=Rv2735c ### -Chromosome ena gene 3048562 3049086 . - . ID=gene:Rv2736c;Name=recX;biotype=protein_coding;description=Regulatory protein RecX;gene_id=Rv2736c;logic_name=ena +Chromosome ena gene 3048562 3049086 . - . ID=gene:Rv2736c;Name=recX;biotype=protein_coding;description=Regulatory protein RecX;gene_id=Rv2736c;logic_name=ena Chromosome ena mRNA 3048562 3049086 . - . ID=transcript:Rv2736c;Parent=gene:Rv2736c;Name=recX-1;biotype=protein_coding;transcript_id=Rv2736c Chromosome ena exon 3048562 3049086 . - . Parent=transcript:Rv2736c;Name=Rv2736c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2736c-1;rank=1 Chromosome ena CDS 3048562 3049086 . - 0 ID=CDS:Rv2736c;Parent=transcript:Rv2736c;protein_id=Rv2736c ### -Chromosome ena gene 3049052 3051424 . - . ID=gene:Rv2737c;Name=recA;biotype=protein_coding;description=RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)].;gene_id=Rv2737c;logic_name=ena +Chromosome ena gene 3049052 3051424 . - . ID=gene:Rv2737c;Name=recA;biotype=protein_coding;description=RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)].;gene_id=Rv2737c;logic_name=ena Chromosome ena mRNA 3049052 3051424 . - . ID=transcript:Rv2737c;Parent=gene:Rv2737c;Name=recA-1;biotype=protein_coding;transcript_id=Rv2737c Chromosome ena exon 3049052 3051424 . - . Parent=transcript:Rv2737c;Name=Rv2737c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2737c-1;rank=1 Chromosome ena CDS 3049052 3051424 . - 0 ID=CDS:Rv2737c;Parent=transcript:Rv2737c;protein_id=Rv2737c ### -Chromosome ena gene 3051619 3051792 . + . ID=gene:Rv2737A;biotype=protein_coding;description=Conserved hypothetical cysteine rich protein (fragment);gene_id=Rv2737A;logic_name=ena +Chromosome ena gene 3051619 3051792 . + . ID=gene:Rv2737A;biotype=protein_coding;description=Conserved hypothetical cysteine rich protein (fragment);gene_id=Rv2737A;logic_name=ena Chromosome ena mRNA 3051619 3051792 . + . ID=transcript:Rv2737A;Parent=gene:Rv2737A;biotype=protein_coding;transcript_id=Rv2737A Chromosome ena exon 3051619 3051792 . + . Parent=transcript:Rv2737A;Name=Rv2737A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2737A-1;rank=1 Chromosome ena CDS 3051619 3051792 . + 0 ID=CDS:Rv2737A;Parent=transcript:Rv2737A;protein_id=Rv2737A ### -Chromosome ena gene 3051806 3052012 . - . ID=gene:Rv2738c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2738c;logic_name=ena +Chromosome ena gene 3051806 3052012 . - . ID=gene:Rv2738c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2738c;logic_name=ena Chromosome ena mRNA 3051806 3052012 . - . ID=transcript:Rv2738c;Parent=gene:Rv2738c;biotype=protein_coding;transcript_id=Rv2738c Chromosome ena exon 3051806 3052012 . - . Parent=transcript:Rv2738c;Name=Rv2738c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2738c-1;rank=1 Chromosome ena CDS 3051806 3052012 . - 0 ID=CDS:Rv2738c;Parent=transcript:Rv2738c;protein_id=Rv2738c ### -Chromosome ena gene 3052023 3053189 . - . ID=gene:Rv2739c;biotype=protein_coding;description=Possible alanine rich transferase;gene_id=Rv2739c;logic_name=ena +Chromosome ena gene 3052023 3053189 . - . ID=gene:Rv2739c;biotype=protein_coding;description=Possible alanine rich transferase;gene_id=Rv2739c;logic_name=ena Chromosome ena mRNA 3052023 3053189 . - . ID=transcript:Rv2739c;Parent=gene:Rv2739c;biotype=protein_coding;transcript_id=Rv2739c Chromosome ena exon 3052023 3053189 . - . Parent=transcript:Rv2739c;Name=Rv2739c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2739c-1;rank=1 Chromosome ena CDS 3052023 3053189 . - 0 ID=CDS:Rv2739c;Parent=transcript:Rv2739c;protein_id=Rv2739c ### -Chromosome ena gene 3053233 3053682 . + . ID=gene:Rv2740;Name=ephG;biotype=protein_coding;description=Epoxide hydrolase;gene_id=Rv2740;logic_name=ena +Chromosome ena gene 3053233 3053682 . + . ID=gene:Rv2740;Name=ephG;biotype=protein_coding;description=Epoxide hydrolase;gene_id=Rv2740;logic_name=ena Chromosome ena mRNA 3053233 3053682 . + . ID=transcript:Rv2740;Parent=gene:Rv2740;Name=ephG-1;biotype=protein_coding;transcript_id=Rv2740 Chromosome ena exon 3053233 3053682 . + . Parent=transcript:Rv2740;Name=Rv2740-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2740-1;rank=1 Chromosome ena CDS 3053233 3053682 . + 0 ID=CDS:Rv2740;Parent=transcript:Rv2740;protein_id=Rv2740 ### -Chromosome ena gene 3053914 3055491 . + . ID=gene:Rv2741;Name=PE_PGRS47;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS47;gene_id=Rv2741;logic_name=ena +Chromosome ena gene 3053914 3055491 . + . ID=gene:Rv2741;Name=PE_PGRS47;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS47;gene_id=Rv2741;logic_name=ena Chromosome ena mRNA 3053914 3055491 . + . ID=transcript:Rv2741;Parent=gene:Rv2741;Name=PE_PGRS47-1;biotype=protein_coding;transcript_id=Rv2741 Chromosome ena exon 3053914 3055491 . + . Parent=transcript:Rv2741;Name=Rv2741-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2741-1;rank=1 Chromosome ena CDS 3053914 3055491 . + 0 ID=CDS:Rv2741;Parent=transcript:Rv2741;protein_id=Rv2741 ### -Chromosome ena gene 3055515 3056348 . - . ID=gene:Rv2742c;biotype=protein_coding;description=Conserved hypothetical arginine rich protein;gene_id=Rv2742c;logic_name=ena +Chromosome ena gene 3055515 3056348 . - . ID=gene:Rv2742c;biotype=protein_coding;description=Conserved hypothetical arginine rich protein;gene_id=Rv2742c;logic_name=ena Chromosome ena mRNA 3055515 3056348 . - . ID=transcript:Rv2742c;Parent=gene:Rv2742c;biotype=protein_coding;transcript_id=Rv2742c Chromosome ena exon 3055515 3056348 . - . Parent=transcript:Rv2742c;Name=Rv2742c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2742c-1;rank=1 Chromosome ena CDS 3055515 3056348 . - 0 ID=CDS:Rv2742c;Parent=transcript:Rv2742c;protein_id=Rv2742c ### -Chromosome ena gene 3056420 3057232 . - . ID=gene:Rv2743c;biotype=protein_coding;description=Possible conserved transmembrane alanine rich protein;gene_id=Rv2743c;logic_name=ena +Chromosome ena gene 3056420 3057232 . - . ID=gene:Rv2743c;biotype=protein_coding;description=Possible conserved transmembrane alanine rich protein;gene_id=Rv2743c;logic_name=ena Chromosome ena mRNA 3056420 3057232 . - . ID=transcript:Rv2743c;Parent=gene:Rv2743c;biotype=protein_coding;transcript_id=Rv2743c Chromosome ena exon 3056420 3057232 . - . Parent=transcript:Rv2743c;Name=Rv2743c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2743c-1;rank=1 Chromosome ena CDS 3056420 3057232 . - 0 ID=CDS:Rv2743c;Parent=transcript:Rv2743c;protein_id=Rv2743c ### -Chromosome ena gene 3057251 3058063 . - . ID=gene:Rv2744c;Name=35kd_ag;biotype=protein_coding;description=Conserved 35 kDa alanine rich protein;gene_id=Rv2744c;logic_name=ena +Chromosome ena gene 3057251 3058063 . - . ID=gene:Rv2744c;Name=35kd_ag;biotype=protein_coding;description=Conserved 35 kDa alanine rich protein;gene_id=Rv2744c;logic_name=ena Chromosome ena mRNA 3057251 3058063 . - . ID=transcript:Rv2744c;Parent=gene:Rv2744c;Name=35kd_ag-1;biotype=protein_coding;transcript_id=Rv2744c Chromosome ena exon 3057251 3058063 . - . Parent=transcript:Rv2744c;Name=Rv2744c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2744c-1;rank=1 Chromosome ena CDS 3057251 3058063 . - 0 ID=CDS:Rv2744c;Parent=transcript:Rv2744c;protein_id=Rv2744c ### -Chromosome ena gene 3058193 3058531 . - . ID=gene:Rv2745c;Name=clgR;biotype=protein_coding;description=Transcriptional regulatory protein ClgR;gene_id=Rv2745c;logic_name=ena +Chromosome ena gene 3058193 3058531 . - . ID=gene:Rv2745c;Name=clgR;biotype=protein_coding;description=Transcriptional regulatory protein ClgR;gene_id=Rv2745c;logic_name=ena Chromosome ena mRNA 3058193 3058531 . - . ID=transcript:Rv2745c;Parent=gene:Rv2745c;Name=clgR-1;biotype=protein_coding;transcript_id=Rv2745c Chromosome ena exon 3058193 3058531 . - . Parent=transcript:Rv2745c;Name=Rv2745c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2745c-1;rank=1 Chromosome ena CDS 3058193 3058531 . - 0 ID=CDS:Rv2745c;Parent=transcript:Rv2745c;protein_id=Rv2745c ### -Chromosome ena gene 3058602 3059231 . - . ID=gene:Rv2746c;Name=pgsA3;biotype=protein_coding;description=Probable PGP synthase PgsA3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase) (phosphatidylglycerophosphate synthase);gene_id=Rv2746c;logic_name=ena +Chromosome ena gene 3058602 3059231 . - . ID=gene:Rv2746c;Name=pgsA3;biotype=protein_coding;description=Probable PGP synthase PgsA3 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase) (phosphatidylglycerophosphate synthase);gene_id=Rv2746c;logic_name=ena Chromosome ena mRNA 3058602 3059231 . - . ID=transcript:Rv2746c;Parent=gene:Rv2746c;Name=pgsA3-1;biotype=protein_coding;transcript_id=Rv2746c Chromosome ena exon 3058602 3059231 . - . Parent=transcript:Rv2746c;Name=Rv2746c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2746c-1;rank=1 Chromosome ena CDS 3058602 3059231 . - 0 ID=CDS:Rv2746c;Parent=transcript:Rv2746c;protein_id=Rv2746c ### -Chromosome ena gene 3059262 3059786 . + . ID=gene:Rv2747;Name=argA;biotype=protein_coding;description=Probable L-glutamate alpha-N-acetyltranferase ArgA (alpha-N-acetylglutamate synthase);gene_id=Rv2747;logic_name=ena +Chromosome ena gene 3059262 3059786 . + . ID=gene:Rv2747;Name=argA;biotype=protein_coding;description=Probable L-glutamate alpha-N-acetyltranferase ArgA (alpha-N-acetylglutamate synthase);gene_id=Rv2747;logic_name=ena Chromosome ena mRNA 3059262 3059786 . + . ID=transcript:Rv2747;Parent=gene:Rv2747;Name=argA-1;biotype=protein_coding;transcript_id=Rv2747 Chromosome ena exon 3059262 3059786 . + . Parent=transcript:Rv2747;Name=Rv2747-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2747-1;rank=1 Chromosome ena CDS 3059262 3059786 . + 0 ID=CDS:Rv2747;Parent=transcript:Rv2747;protein_id=Rv2747 ### -Chromosome ena gene 3059855 3062506 . - . ID=gene:Rv2748c;Name=ftsK;biotype=protein_coding;description=Possible cell division transmembrane protein FtsK;gene_id=Rv2748c;logic_name=ena +Chromosome ena gene 3059855 3062506 . - . ID=gene:Rv2748c;Name=ftsK;biotype=protein_coding;description=Possible cell division transmembrane protein FtsK;gene_id=Rv2748c;logic_name=ena Chromosome ena mRNA 3059855 3062506 . - . ID=transcript:Rv2748c;Parent=gene:Rv2748c;Name=ftsK-1;biotype=protein_coding;transcript_id=Rv2748c Chromosome ena exon 3059855 3062506 . - . Parent=transcript:Rv2748c;Name=Rv2748c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2748c-1;rank=1 Chromosome ena CDS 3059855 3062506 . - 0 ID=CDS:Rv2748c;Parent=transcript:Rv2748c;protein_id=Rv2748c ### -Chromosome ena gene 3062505 3062819 . + . ID=gene:Rv2749;biotype=protein_coding;description=Conserved protein;gene_id=Rv2749;logic_name=ena +Chromosome ena gene 3062505 3062819 . + . ID=gene:Rv2749;biotype=protein_coding;description=Conserved protein;gene_id=Rv2749;logic_name=ena Chromosome ena mRNA 3062505 3062819 . + . ID=transcript:Rv2749;Parent=gene:Rv2749;biotype=protein_coding;transcript_id=Rv2749 Chromosome ena exon 3062505 3062819 . + . Parent=transcript:Rv2749;Name=Rv2749-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2749-1;rank=1 Chromosome ena CDS 3062505 3062819 . + 0 ID=CDS:Rv2749;Parent=transcript:Rv2749;protein_id=Rv2749 ### -Chromosome ena gene 3062816 3063634 . + . ID=gene:Rv2750;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv2750;logic_name=ena +Chromosome ena gene 3062816 3063634 . + . ID=gene:Rv2750;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv2750;logic_name=ena Chromosome ena mRNA 3062816 3063634 . + . ID=transcript:Rv2750;Parent=gene:Rv2750;biotype=protein_coding;transcript_id=Rv2750 Chromosome ena exon 3062816 3063634 . + . Parent=transcript:Rv2750;Name=Rv2750-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2750-1;rank=1 Chromosome ena CDS 3062816 3063634 . + 0 ID=CDS:Rv2750;Parent=transcript:Rv2750;protein_id=Rv2750 ### -Chromosome ena gene 3063638 3064528 . + . ID=gene:Rv2751;biotype=protein_coding;description=Conserved protein;gene_id=Rv2751;logic_name=ena +Chromosome ena gene 3063638 3064528 . + . ID=gene:Rv2751;biotype=protein_coding;description=Conserved protein;gene_id=Rv2751;logic_name=ena Chromosome ena mRNA 3063638 3064528 . + . ID=transcript:Rv2751;Parent=gene:Rv2751;biotype=protein_coding;transcript_id=Rv2751 Chromosome ena exon 3063638 3064528 . + . Parent=transcript:Rv2751;Name=Rv2751-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2751-1;rank=1 Chromosome ena CDS 3063638 3064528 . + 0 ID=CDS:Rv2751;Parent=transcript:Rv2751;protein_id=Rv2751 ### -Chromosome ena gene 3064515 3066191 . - . ID=gene:Rv2752c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2752c;logic_name=ena +Chromosome ena gene 3064515 3066191 . - . ID=gene:Rv2752c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2752c;logic_name=ena Chromosome ena mRNA 3064515 3066191 . - . ID=transcript:Rv2752c;Parent=gene:Rv2752c;biotype=protein_coding;transcript_id=Rv2752c Chromosome ena exon 3064515 3066191 . - . Parent=transcript:Rv2752c;Name=Rv2752c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2752c-1;rank=1 Chromosome ena CDS 3064515 3066191 . - 0 ID=CDS:Rv2752c;Parent=transcript:Rv2752c;protein_id=Rv2752c ### -Chromosome ena gene 3066222 3067124 . - . ID=gene:Rv2753c;Name=dapA;biotype=protein_coding;description=Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase);gene_id=Rv2753c;logic_name=ena +Chromosome ena gene 3066222 3067124 . - . ID=gene:Rv2753c;Name=dapA;biotype=protein_coding;description=Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase);gene_id=Rv2753c;logic_name=ena Chromosome ena mRNA 3066222 3067124 . - . ID=transcript:Rv2753c;Parent=gene:Rv2753c;Name=dapA-1;biotype=protein_coding;transcript_id=Rv2753c Chromosome ena exon 3066222 3067124 . - . Parent=transcript:Rv2753c;Name=Rv2753c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2753c-1;rank=1 Chromosome ena CDS 3066222 3067124 . - 0 ID=CDS:Rv2753c;Parent=transcript:Rv2753c;protein_id=Rv2753c ### -Chromosome ena gene 3067193 3067945 . - . ID=gene:Rv2754c;Name=thyX;biotype=protein_coding;description=Probable thymidylate synthase ThyX (ts) (TSase);gene_id=Rv2754c;logic_name=ena +Chromosome ena gene 3067193 3067945 . - . ID=gene:Rv2754c;Name=thyX;biotype=protein_coding;description=Probable thymidylate synthase ThyX (ts) (TSase);gene_id=Rv2754c;logic_name=ena Chromosome ena mRNA 3067193 3067945 . - . ID=transcript:Rv2754c;Parent=gene:Rv2754c;Name=thyX-1;biotype=protein_coding;transcript_id=Rv2754c Chromosome ena exon 3067193 3067945 . - . Parent=transcript:Rv2754c;Name=Rv2754c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2754c-1;rank=1 Chromosome ena CDS 3067193 3067945 . - 0 ID=CDS:Rv2754c;Parent=transcript:Rv2754c;protein_id=Rv2754c ### -Chromosome ena gene 3068189 3068464 . - . ID=gene:Rv2755c;Name=hsdS.1;biotype=protein_coding;description=Possible type I restriction/modification system specificity determinant (fragment) HsdS.1 (S protein);gene_id=Rv2755c;logic_name=ena +Chromosome ena gene 3068189 3068464 . - . ID=gene:Rv2755c;Name=hsdS.1;biotype=protein_coding;description=Possible type I restriction/modification system specificity determinant (fragment) HsdS.1 (S protein);gene_id=Rv2755c;logic_name=ena Chromosome ena mRNA 3068189 3068464 . - . ID=transcript:Rv2755c;Parent=gene:Rv2755c;Name=hsdS.1-1;biotype=protein_coding;transcript_id=Rv2755c Chromosome ena exon 3068189 3068464 . - . Parent=transcript:Rv2755c;Name=Rv2755c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2755c-1;rank=1 Chromosome ena CDS 3068189 3068464 . - 0 ID=CDS:Rv2755c;Parent=transcript:Rv2755c;protein_id=Rv2755c ### -Chromosome ena gene 3068461 3070083 . - . ID=gene:Rv2756c;Name=hsdM;biotype=protein_coding;description=Possible type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase);gene_id=Rv2756c;logic_name=ena +Chromosome ena gene 3068461 3070083 . - . ID=gene:Rv2756c;Name=hsdM;biotype=protein_coding;description=Possible type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase);gene_id=Rv2756c;logic_name=ena Chromosome ena mRNA 3068461 3070083 . - . ID=transcript:Rv2756c;Parent=gene:Rv2756c;Name=hsdM-1;biotype=protein_coding;transcript_id=Rv2756c Chromosome ena exon 3068461 3070083 . - . Parent=transcript:Rv2756c;Name=Rv2756c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2756c-1;rank=1 Chromosome ena CDS 3068461 3070083 . - 0 ID=CDS:Rv2756c;Parent=transcript:Rv2756c;protein_id=Rv2756c ### -Chromosome ena gene 3070170 3070586 . - . ID=gene:Rv2757c;Name=vapC21;biotype=protein_coding;description=Possible toxin VapC21;gene_id=Rv2757c;logic_name=ena +Chromosome ena gene 3070170 3070586 . - . ID=gene:Rv2757c;Name=vapC21;biotype=protein_coding;description=Possible toxin VapC21;gene_id=Rv2757c;logic_name=ena Chromosome ena mRNA 3070170 3070586 . - . ID=transcript:Rv2757c;Parent=gene:Rv2757c;Name=vapC21-1;biotype=protein_coding;transcript_id=Rv2757c Chromosome ena exon 3070170 3070586 . - . Parent=transcript:Rv2757c;Name=Rv2757c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2757c-1;rank=1 Chromosome ena CDS 3070170 3070586 . - 0 ID=CDS:Rv2757c;Parent=transcript:Rv2757c;protein_id=Rv2757c ### -Chromosome ena gene 3070583 3070849 . - . ID=gene:Rv2758c;Name=vapB21;biotype=protein_coding;description=Possible antitoxin VapB21;gene_id=Rv2758c;logic_name=ena +Chromosome ena gene 3070583 3070849 . - . ID=gene:Rv2758c;Name=vapB21;biotype=protein_coding;description=Possible antitoxin VapB21;gene_id=Rv2758c;logic_name=ena Chromosome ena mRNA 3070583 3070849 . - . ID=transcript:Rv2758c;Parent=gene:Rv2758c;Name=vapB21-1;biotype=protein_coding;transcript_id=Rv2758c Chromosome ena exon 3070583 3070849 . - . Parent=transcript:Rv2758c;Name=Rv2758c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2758c-1;rank=1 Chromosome ena CDS 3070583 3070849 . - 0 ID=CDS:Rv2758c;Parent=transcript:Rv2758c;protein_id=Rv2758c ### -Chromosome ena gene 3070875 3071270 . - . ID=gene:Rv2759c;Name=vapC42;biotype=protein_coding;description=Possible toxin VapC42. Contains PIN domain.;gene_id=Rv2759c;logic_name=ena +Chromosome ena gene 3070875 3071270 . - . ID=gene:Rv2759c;Name=vapC42;biotype=protein_coding;description=Possible toxin VapC42. Contains PIN domain.;gene_id=Rv2759c;logic_name=ena Chromosome ena mRNA 3070875 3071270 . - . ID=transcript:Rv2759c;Parent=gene:Rv2759c;Name=vapC42-1;biotype=protein_coding;transcript_id=Rv2759c Chromosome ena exon 3070875 3071270 . - . Parent=transcript:Rv2759c;Name=Rv2759c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2759c-1;rank=1 Chromosome ena CDS 3070875 3071270 . - 0 ID=CDS:Rv2759c;Parent=transcript:Rv2759c;protein_id=Rv2759c ### -Chromosome ena gene 3071267 3071536 . - . ID=gene:Rv2760c;Name=vapB42;biotype=protein_coding;description=Possible antitoxin VapB42;gene_id=Rv2760c;logic_name=ena +Chromosome ena gene 3071267 3071536 . - . ID=gene:Rv2760c;Name=vapB42;biotype=protein_coding;description=Possible antitoxin VapB42;gene_id=Rv2760c;logic_name=ena Chromosome ena mRNA 3071267 3071536 . - . ID=transcript:Rv2760c;Parent=gene:Rv2760c;Name=vapB42-1;biotype=protein_coding;transcript_id=Rv2760c Chromosome ena exon 3071267 3071536 . - . Parent=transcript:Rv2760c;Name=Rv2760c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2760c-1;rank=1 Chromosome ena CDS 3071267 3071536 . - 0 ID=CDS:Rv2760c;Parent=transcript:Rv2760c;protein_id=Rv2760c ### -Chromosome ena gene 3071546 3072640 . - . ID=gene:Rv2761c;Name=hsdS;biotype=protein_coding;description=Possible type I restriction/modification system specificity determinant HsdS (S protein);gene_id=Rv2761c;logic_name=ena +Chromosome ena gene 3071546 3072640 . - . ID=gene:Rv2761c;Name=hsdS;biotype=protein_coding;description=Possible type I restriction/modification system specificity determinant HsdS (S protein);gene_id=Rv2761c;logic_name=ena Chromosome ena mRNA 3071546 3072640 . - . ID=transcript:Rv2761c;Parent=gene:Rv2761c;Name=hsdS-1;biotype=protein_coding;transcript_id=Rv2761c Chromosome ena exon 3071546 3072640 . - . Parent=transcript:Rv2761c;Name=Rv2761c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2761c-1;rank=1 Chromosome ena CDS 3071546 3072640 . - 0 ID=CDS:Rv2761c;Parent=transcript:Rv2761c;protein_id=Rv2761c ### -Chromosome ena gene 3072637 3073056 . - . ID=gene:Rv2762c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2762c;logic_name=ena +Chromosome ena gene 3072637 3073056 . - . ID=gene:Rv2762c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2762c;logic_name=ena Chromosome ena mRNA 3072637 3073056 . - . ID=transcript:Rv2762c;Parent=gene:Rv2762c;biotype=protein_coding;transcript_id=Rv2762c Chromosome ena exon 3072637 3073056 . - . Parent=transcript:Rv2762c;Name=Rv2762c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2762c-1;rank=1 Chromosome ena CDS 3072637 3073056 . - 0 ID=CDS:Rv2762c;Parent=transcript:Rv2762c;protein_id=Rv2762c ### -Chromosome ena gene 3073130 3073609 . - . ID=gene:Rv2763c;Name=dfrA;biotype=protein_coding;description=Dihydrofolate reductase DfrA (DHFR) (tetrahydrofolate dehydrogenase);gene_id=Rv2763c;logic_name=ena +Chromosome ena gene 3073130 3073609 . - . ID=gene:Rv2763c;Name=dfrA;biotype=protein_coding;description=Dihydrofolate reductase DfrA (DHFR) (tetrahydrofolate dehydrogenase);gene_id=Rv2763c;logic_name=ena Chromosome ena mRNA 3073130 3073609 . - . ID=transcript:Rv2763c;Parent=gene:Rv2763c;Name=dfrA-1;biotype=protein_coding;transcript_id=Rv2763c Chromosome ena exon 3073130 3073609 . - . Parent=transcript:Rv2763c;Name=Rv2763c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2763c-1;rank=1 Chromosome ena CDS 3073130 3073609 . - 0 ID=CDS:Rv2763c;Parent=transcript:Rv2763c;protein_id=Rv2763c ### -Chromosome ena gene 3073680 3074471 . - . ID=gene:Rv2764c;Name=thyA;biotype=protein_coding;description=Probable thymidylate synthase ThyA (ts) (TSASE);gene_id=Rv2764c;logic_name=ena +Chromosome ena gene 3073680 3074471 . - . ID=gene:Rv2764c;Name=thyA;biotype=protein_coding;description=Probable thymidylate synthase ThyA (ts) (TSASE);gene_id=Rv2764c;logic_name=ena Chromosome ena mRNA 3073680 3074471 . - . ID=transcript:Rv2764c;Parent=gene:Rv2764c;Name=thyA-1;biotype=protein_coding;transcript_id=Rv2764c Chromosome ena exon 3073680 3074471 . - . Parent=transcript:Rv2764c;Name=Rv2764c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2764c-1;rank=1 Chromosome ena CDS 3073680 3074471 . - 0 ID=CDS:Rv2764c;Parent=transcript:Rv2764c;protein_id=Rv2764c ### -Chromosome ena gene 3074636 3075373 . + . ID=gene:Rv2765;biotype=protein_coding;description=Probable alanine rich hydrolase;gene_id=Rv2765;logic_name=ena +Chromosome ena gene 3074636 3075373 . + . ID=gene:Rv2765;biotype=protein_coding;description=Probable alanine rich hydrolase;gene_id=Rv2765;logic_name=ena Chromosome ena mRNA 3074636 3075373 . + . ID=transcript:Rv2765;Parent=gene:Rv2765;biotype=protein_coding;transcript_id=Rv2765 Chromosome ena exon 3074636 3075373 . + . Parent=transcript:Rv2765;Name=Rv2765-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2765-1;rank=1 Chromosome ena CDS 3074636 3075373 . + 0 ID=CDS:Rv2765;Parent=transcript:Rv2765;protein_id=Rv2765 ### -Chromosome ena gene 3075588 3076370 . - . ID=gene:Rv2766c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2766c;logic_name=ena +Chromosome ena gene 3075588 3076370 . - . ID=gene:Rv2766c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2766c;logic_name=ena Chromosome ena mRNA 3075588 3076370 . - . ID=transcript:Rv2766c;Parent=gene:Rv2766c;biotype=protein_coding;transcript_id=Rv2766c Chromosome ena exon 3075588 3076370 . - . Parent=transcript:Rv2766c;Name=Rv2766c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2766c-1;rank=1 Chromosome ena CDS 3075588 3076370 . - 0 ID=CDS:Rv2766c;Parent=transcript:Rv2766c;protein_id=Rv2766c ### -Chromosome ena gene 3076367 3076720 . - . ID=gene:Rv2767c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv2767c;logic_name=ena +Chromosome ena gene 3076367 3076720 . - . ID=gene:Rv2767c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv2767c;logic_name=ena Chromosome ena mRNA 3076367 3076720 . - . ID=transcript:Rv2767c;Parent=gene:Rv2767c;biotype=protein_coding;transcript_id=Rv2767c Chromosome ena exon 3076367 3076720 . - . Parent=transcript:Rv2767c;Name=Rv2767c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2767c-1;rank=1 Chromosome ena CDS 3076367 3076720 . - 0 ID=CDS:Rv2767c;Parent=transcript:Rv2767c;protein_id=Rv2767c ### -Chromosome ena gene 3076894 3078078 . - . ID=gene:Rv2768c;Name=PPE43;biotype=protein_coding;description=PPE family protein PPE43;gene_id=Rv2768c;logic_name=ena +Chromosome ena gene 3076894 3078078 . - . ID=gene:Rv2768c;Name=PPE43;biotype=protein_coding;description=PPE family protein PPE43;gene_id=Rv2768c;logic_name=ena Chromosome ena mRNA 3076894 3078078 . - . ID=transcript:Rv2768c;Parent=gene:Rv2768c;Name=PPE43-1;biotype=protein_coding;transcript_id=Rv2768c Chromosome ena exon 3076894 3078078 . - . Parent=transcript:Rv2768c;Name=Rv2768c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2768c-1;rank=1 Chromosome ena CDS 3076894 3078078 . - 0 ID=CDS:Rv2768c;Parent=transcript:Rv2768c;protein_id=Rv2768c ### -Chromosome ena gene 3078158 3078985 . - . ID=gene:Rv2769c;Name=PE27;biotype=protein_coding;description=PE family protein PE27;gene_id=Rv2769c;logic_name=ena +Chromosome ena gene 3078158 3078985 . - . ID=gene:Rv2769c;Name=PE27;biotype=protein_coding;description=PE family protein PE27;gene_id=Rv2769c;logic_name=ena Chromosome ena mRNA 3078158 3078985 . - . ID=transcript:Rv2769c;Parent=gene:Rv2769c;Name=PE27-1;biotype=protein_coding;transcript_id=Rv2769c Chromosome ena exon 3078158 3078985 . - . Parent=transcript:Rv2769c;Name=Rv2769c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2769c-1;rank=1 Chromosome ena CDS 3078158 3078985 . - 0 ID=CDS:Rv2769c;Parent=transcript:Rv2769c;protein_id=Rv2769c ### -Chromosome ena gene 3079309 3080457 . - . ID=gene:Rv2770c;Name=PPE44;biotype=protein_coding;description=PPE family protein PPE44;gene_id=Rv2770c;logic_name=ena +Chromosome ena gene 3079309 3080457 . - . ID=gene:Rv2770c;Name=PPE44;biotype=protein_coding;description=PPE family protein PPE44;gene_id=Rv2770c;logic_name=ena Chromosome ena mRNA 3079309 3080457 . - . ID=transcript:Rv2770c;Parent=gene:Rv2770c;Name=PPE44-1;biotype=protein_coding;transcript_id=Rv2770c Chromosome ena exon 3079309 3080457 . - . Parent=transcript:Rv2770c;Name=Rv2770c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2770c-1;rank=1 Chromosome ena CDS 3079309 3080457 . - 0 ID=CDS:Rv2770c;Parent=transcript:Rv2770c;protein_id=Rv2770c ### -Chromosome ena gene 3080581 3081033 . - . ID=gene:Rv2771c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2771c;logic_name=ena +Chromosome ena gene 3080581 3081033 . - . ID=gene:Rv2771c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2771c;logic_name=ena Chromosome ena mRNA 3080581 3081033 . - . ID=transcript:Rv2771c;Parent=gene:Rv2771c;biotype=protein_coding;transcript_id=Rv2771c Chromosome ena exon 3080581 3081033 . - . Parent=transcript:Rv2771c;Name=Rv2771c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2771c-1;rank=1 Chromosome ena CDS 3080581 3081033 . - 0 ID=CDS:Rv2771c;Parent=transcript:Rv2771c;protein_id=Rv2771c ### -Chromosome ena gene 3081119 3081592 . - . ID=gene:Rv2772c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2772c;logic_name=ena +Chromosome ena gene 3081119 3081592 . - . ID=gene:Rv2772c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv2772c;logic_name=ena Chromosome ena mRNA 3081119 3081592 . - . ID=transcript:Rv2772c;Parent=gene:Rv2772c;biotype=protein_coding;transcript_id=Rv2772c Chromosome ena exon 3081119 3081592 . - . Parent=transcript:Rv2772c;Name=Rv2772c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2772c-1;rank=1 Chromosome ena CDS 3081119 3081592 . - 0 ID=CDS:Rv2772c;Parent=transcript:Rv2772c;protein_id=Rv2772c ### -Chromosome ena gene 3081604 3082341 . - . ID=gene:Rv2773c;Name=dapB;biotype=protein_coding;description=Dihydrodipicolinate reductase DapB (DHPR);gene_id=Rv2773c;logic_name=ena +Chromosome ena gene 3081604 3082341 . - . ID=gene:Rv2773c;Name=dapB;biotype=protein_coding;description=Dihydrodipicolinate reductase DapB (DHPR);gene_id=Rv2773c;logic_name=ena Chromosome ena mRNA 3081604 3082341 . - . ID=transcript:Rv2773c;Parent=gene:Rv2773c;Name=dapB-1;biotype=protein_coding;transcript_id=Rv2773c Chromosome ena exon 3081604 3082341 . - . Parent=transcript:Rv2773c;Name=Rv2773c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2773c-1;rank=1 Chromosome ena CDS 3081604 3082341 . - 0 ID=CDS:Rv2773c;Parent=transcript:Rv2773c;protein_id=Rv2773c ### -Chromosome ena gene 3082352 3082756 . - . ID=gene:Rv2774c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2774c;logic_name=ena +Chromosome ena gene 3082352 3082756 . - . ID=gene:Rv2774c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2774c;logic_name=ena Chromosome ena mRNA 3082352 3082756 . - . ID=transcript:Rv2774c;Parent=gene:Rv2774c;biotype=protein_coding;transcript_id=Rv2774c Chromosome ena exon 3082352 3082756 . - . Parent=transcript:Rv2774c;Name=Rv2774c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2774c-1;rank=1 Chromosome ena CDS 3082352 3082756 . - 0 ID=CDS:Rv2774c;Parent=transcript:Rv2774c;protein_id=Rv2774c ### -Chromosome ena gene 3082909 3083370 . + . ID=gene:Rv2775;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2775;logic_name=ena +Chromosome ena gene 3082909 3083370 . + . ID=gene:Rv2775;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2775;logic_name=ena Chromosome ena mRNA 3082909 3083370 . + . ID=transcript:Rv2775;Parent=gene:Rv2775;biotype=protein_coding;transcript_id=Rv2775 Chromosome ena exon 3082909 3083370 . + . Parent=transcript:Rv2775;Name=Rv2775-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2775-1;rank=1 Chromosome ena CDS 3082909 3083370 . + 0 ID=CDS:Rv2775;Parent=transcript:Rv2775;protein_id=Rv2775 ### -Chromosome ena gene 3083374 3084303 . - . ID=gene:Rv2776c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2776c;logic_name=ena +Chromosome ena gene 3083374 3084303 . - . ID=gene:Rv2776c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2776c;logic_name=ena Chromosome ena mRNA 3083374 3084303 . - . ID=transcript:Rv2776c;Parent=gene:Rv2776c;biotype=protein_coding;transcript_id=Rv2776c Chromosome ena exon 3083374 3084303 . - . Parent=transcript:Rv2776c;Name=Rv2776c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2776c-1;rank=1 Chromosome ena CDS 3083374 3084303 . - 0 ID=CDS:Rv2776c;Parent=transcript:Rv2776c;protein_id=Rv2776c ### -Chromosome ena gene 3084485 3085555 . - . ID=gene:Rv2777c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2777c;logic_name=ena +Chromosome ena gene 3084485 3085555 . - . ID=gene:Rv2777c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2777c;logic_name=ena Chromosome ena mRNA 3084485 3085555 . - . ID=transcript:Rv2777c;Parent=gene:Rv2777c;biotype=protein_coding;transcript_id=Rv2777c Chromosome ena exon 3084485 3085555 . - . Parent=transcript:Rv2777c;Name=Rv2777c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2777c-1;rank=1 Chromosome ena CDS 3084485 3085555 . - 0 ID=CDS:Rv2777c;Parent=transcript:Rv2777c;protein_id=Rv2777c ### -Chromosome ena gene 3085713 3086183 . - . ID=gene:Rv2778c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2778c;logic_name=ena +Chromosome ena gene 3085713 3086183 . - . ID=gene:Rv2778c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2778c;logic_name=ena Chromosome ena mRNA 3085713 3086183 . - . ID=transcript:Rv2778c;Parent=gene:Rv2778c;biotype=protein_coding;transcript_id=Rv2778c Chromosome ena exon 3085713 3086183 . - . Parent=transcript:Rv2778c;Name=Rv2778c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2778c-1;rank=1 Chromosome ena CDS 3085713 3086183 . - 0 ID=CDS:Rv2778c;Parent=transcript:Rv2778c;protein_id=Rv2778c ### -Chromosome ena gene 3086215 3086754 . - . ID=gene:Rv2779c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably Lrp/AsnC-family);gene_id=Rv2779c;logic_name=ena +Chromosome ena gene 3086215 3086754 . - . ID=gene:Rv2779c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably Lrp/AsnC-family);gene_id=Rv2779c;logic_name=ena Chromosome ena mRNA 3086215 3086754 . - . ID=transcript:Rv2779c;Parent=gene:Rv2779c;biotype=protein_coding;transcript_id=Rv2779c Chromosome ena exon 3086215 3086754 . - . Parent=transcript:Rv2779c;Name=Rv2779c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2779c-1;rank=1 Chromosome ena CDS 3086215 3086754 . - 0 ID=CDS:Rv2779c;Parent=transcript:Rv2779c;protein_id=Rv2779c ### -Chromosome ena gene 3086820 3087935 . + . ID=gene:Rv2780;Name=ald;biotype=protein_coding;description=Secreted L-alanine dehydrogenase Ald (40 kDa antigen) (TB43);gene_id=Rv2780;logic_name=ena +Chromosome ena gene 3086820 3087935 . + . ID=gene:Rv2780;Name=ald;biotype=protein_coding;description=Secreted L-alanine dehydrogenase Ald (40 kDa antigen) (TB43);gene_id=Rv2780;logic_name=ena Chromosome ena mRNA 3086820 3087935 . + . ID=transcript:Rv2780;Parent=gene:Rv2780;Name=ald-1;biotype=protein_coding;transcript_id=Rv2780 Chromosome ena exon 3086820 3087935 . + . Parent=transcript:Rv2780;Name=Rv2780-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2780-1;rank=1 Chromosome ena CDS 3086820 3087935 . + 0 ID=CDS:Rv2780;Parent=transcript:Rv2780;protein_id=Rv2780 ### -Chromosome ena gene 3087950 3088984 . - . ID=gene:Rv2781c;biotype=protein_coding;description=Possible alanine rich oxidoreductase;gene_id=Rv2781c;logic_name=ena +Chromosome ena gene 3087950 3088984 . - . ID=gene:Rv2781c;biotype=protein_coding;description=Possible alanine rich oxidoreductase;gene_id=Rv2781c;logic_name=ena Chromosome ena mRNA 3087950 3088984 . - . ID=transcript:Rv2781c;Parent=gene:Rv2781c;biotype=protein_coding;transcript_id=Rv2781c Chromosome ena exon 3087950 3088984 . - . Parent=transcript:Rv2781c;Name=Rv2781c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2781c-1;rank=1 Chromosome ena CDS 3087950 3088984 . - 0 ID=CDS:Rv2781c;Parent=transcript:Rv2781c;protein_id=Rv2781c ### -Chromosome ena gene 3089045 3090361 . - . ID=gene:Rv2782c;Name=pepR;biotype=protein_coding;description=Probable zinc protease PepR;gene_id=Rv2782c;logic_name=ena +Chromosome ena gene 3089045 3090361 . - . ID=gene:Rv2782c;Name=pepR;biotype=protein_coding;description=Probable zinc protease PepR;gene_id=Rv2782c;logic_name=ena Chromosome ena mRNA 3089045 3090361 . - . ID=transcript:Rv2782c;Parent=gene:Rv2782c;Name=pepR-1;biotype=protein_coding;transcript_id=Rv2782c Chromosome ena exon 3089045 3090361 . - . Parent=transcript:Rv2782c;Name=Rv2782c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2782c-1;rank=1 Chromosome ena CDS 3089045 3090361 . - 0 ID=CDS:Rv2782c;Parent=transcript:Rv2782c;protein_id=Rv2782c ### -Chromosome ena gene 3090339 3092597 . - . ID=gene:Rv2783c;Name=gpsI;biotype=protein_coding;description=Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase);gene_id=Rv2783c;logic_name=ena +Chromosome ena gene 3090339 3092597 . - . ID=gene:Rv2783c;Name=gpsI;biotype=protein_coding;description=Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase);gene_id=Rv2783c;logic_name=ena Chromosome ena mRNA 3090339 3092597 . - . ID=transcript:Rv2783c;Parent=gene:Rv2783c;Name=gpsI-1;biotype=protein_coding;transcript_id=Rv2783c Chromosome ena exon 3090339 3092597 . - . Parent=transcript:Rv2783c;Name=Rv2783c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2783c-1;rank=1 Chromosome ena CDS 3090339 3092597 . - 0 ID=CDS:Rv2783c;Parent=transcript:Rv2783c;protein_id=Rv2783c ### -Chromosome ena gene 3092951 3093466 . - . ID=gene:Rv2784c;Name=lppU;biotype=protein_coding;description=Probable lipoprotein LppU;gene_id=Rv2784c;logic_name=ena +Chromosome ena gene 3092951 3093466 . - . ID=gene:Rv2784c;Name=lppU;biotype=protein_coding;description=Probable lipoprotein LppU;gene_id=Rv2784c;logic_name=ena Chromosome ena mRNA 3092951 3093466 . - . ID=transcript:Rv2784c;Parent=gene:Rv2784c;Name=lppU-1;biotype=protein_coding;transcript_id=Rv2784c Chromosome ena exon 3092951 3093466 . - . Parent=transcript:Rv2784c;Name=Rv2784c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2784c-1;rank=1 Chromosome ena CDS 3092951 3093466 . - 0 ID=CDS:Rv2784c;Parent=transcript:Rv2784c;protein_id=Rv2784c ### -Chromosome ena gene 3093479 3093748 . - . ID=gene:Rv2785c;Name=rpsO;biotype=protein_coding;description=30S ribosomal protein S15 RpsO;gene_id=Rv2785c;logic_name=ena +Chromosome ena gene 3093479 3093748 . - . ID=gene:Rv2785c;Name=rpsO;biotype=protein_coding;description=30S ribosomal protein S15 RpsO;gene_id=Rv2785c;logic_name=ena Chromosome ena mRNA 3093479 3093748 . - . ID=transcript:Rv2785c;Parent=gene:Rv2785c;Name=rpsO-1;biotype=protein_coding;transcript_id=Rv2785c Chromosome ena exon 3093479 3093748 . - . Parent=transcript:Rv2785c;Name=Rv2785c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2785c-1;rank=1 Chromosome ena CDS 3093479 3093748 . - 0 ID=CDS:Rv2785c;Parent=transcript:Rv2785c;protein_id=Rv2785c ### -Chromosome ena gene 3093905 3094900 . - . ID=gene:Rv2786c;Name=ribF;biotype=protein_coding;description=Probable bifunctional FAD synthetase/riboflavin biosynthesis protein RibF: riboflavin kinase (flavokinase) + FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)(FAD diphosphorylase) (flavin adenine dinucleotide synthetase);gene_id=Rv2786c;logic_name=ena +Chromosome ena gene 3093905 3094900 . - . ID=gene:Rv2786c;Name=ribF;biotype=protein_coding;description=Probable bifunctional FAD synthetase/riboflavin biosynthesis protein RibF: riboflavin kinase (flavokinase) + FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)(FAD diphosphorylase) (flavin adenine dinucleotide synthetase);gene_id=Rv2786c;logic_name=ena Chromosome ena mRNA 3093905 3094900 . - . ID=transcript:Rv2786c;Parent=gene:Rv2786c;Name=ribF-1;biotype=protein_coding;transcript_id=Rv2786c Chromosome ena exon 3093905 3094900 . - . Parent=transcript:Rv2786c;Name=Rv2786c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2786c-1;rank=1 Chromosome ena CDS 3093905 3094900 . - 0 ID=CDS:Rv2786c;Parent=transcript:Rv2786c;protein_id=Rv2786c ### -Chromosome ena gene 3095111 3096874 . + . ID=gene:Rv2787;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2787;logic_name=ena +Chromosome ena gene 3095111 3096874 . + . ID=gene:Rv2787;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2787;logic_name=ena Chromosome ena mRNA 3095111 3096874 . + . ID=transcript:Rv2787;Parent=gene:Rv2787;biotype=protein_coding;transcript_id=Rv2787 Chromosome ena exon 3095111 3096874 . + . Parent=transcript:Rv2787;Name=Rv2787-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2787-1;rank=1 Chromosome ena CDS 3095111 3096874 . + 0 ID=CDS:Rv2787;Parent=transcript:Rv2787;protein_id=Rv2787 ### -Chromosome ena gene 3096959 3097645 . + . ID=gene:Rv2788;Name=sirR;biotype=protein_coding;description=Probable transcriptional repressor SirR;gene_id=Rv2788;logic_name=ena +Chromosome ena gene 3096959 3097645 . + . ID=gene:Rv2788;Name=sirR;biotype=protein_coding;description=Probable transcriptional repressor SirR;gene_id=Rv2788;logic_name=ena Chromosome ena mRNA 3096959 3097645 . + . ID=transcript:Rv2788;Parent=gene:Rv2788;Name=sirR-1;biotype=protein_coding;transcript_id=Rv2788 Chromosome ena exon 3096959 3097645 . + . Parent=transcript:Rv2788;Name=Rv2788-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2788-1;rank=1 Chromosome ena CDS 3096959 3097645 . + 0 ID=CDS:Rv2788;Parent=transcript:Rv2788;protein_id=Rv2788 ### -Chromosome ena gene 3097706 3098938 . - . ID=gene:Rv2789c;Name=fadE21;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE21;gene_id=Rv2789c;logic_name=ena +Chromosome ena gene 3097706 3098938 . - . ID=gene:Rv2789c;Name=fadE21;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE21;gene_id=Rv2789c;logic_name=ena Chromosome ena mRNA 3097706 3098938 . - . ID=transcript:Rv2789c;Parent=gene:Rv2789c;Name=fadE21-1;biotype=protein_coding;transcript_id=Rv2789c Chromosome ena exon 3097706 3098938 . - . Parent=transcript:Rv2789c;Name=Rv2789c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2789c-1;rank=1 Chromosome ena CDS 3097706 3098938 . - 0 ID=CDS:Rv2789c;Parent=transcript:Rv2789c;protein_id=Rv2789c ### -Chromosome ena gene 3098964 3100169 . - . ID=gene:Rv2790c;Name=ltp1;biotype=protein_coding;description=Probable lipid-transfer protein Ltp1;gene_id=Rv2790c;logic_name=ena +Chromosome ena gene 3098964 3100169 . - . ID=gene:Rv2790c;Name=ltp1;biotype=protein_coding;description=Probable lipid-transfer protein Ltp1;gene_id=Rv2790c;logic_name=ena Chromosome ena mRNA 3098964 3100169 . - . ID=transcript:Rv2790c;Parent=gene:Rv2790c;Name=ltp1-1;biotype=protein_coding;transcript_id=Rv2790c Chromosome ena exon 3098964 3100169 . - . Parent=transcript:Rv2790c;Name=Rv2790c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2790c-1;rank=1 Chromosome ena CDS 3098964 3100169 . - 0 ID=CDS:Rv2790c;Parent=transcript:Rv2790c;protein_id=Rv2790c ### -Chromosome ena_mobile_element biological_region 3100175 3102206 . + . external_name=IS1602%2C len: 2032 nt. Insertion sequence IS1602.;logic_name=ena_mobile_element -Chromosome ena gene 3100202 3101581 . - . ID=gene:Rv2791c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2791c;logic_name=ena +Chromosome ena_mobile_element biological_region 3100175 3102206 . + . external_name=IS1602%2C len: 2032 nt. Insertion sequence IS1602.;logic_name=ena_mobile_element +Chromosome ena gene 3100202 3101581 . - . ID=gene:Rv2791c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2791c;logic_name=ena Chromosome ena mRNA 3100202 3101581 . - . ID=transcript:Rv2791c;Parent=gene:Rv2791c;biotype=protein_coding;transcript_id=Rv2791c Chromosome ena exon 3100202 3101581 . - . Parent=transcript:Rv2791c;Name=Rv2791c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2791c-1;rank=1 Chromosome ena CDS 3100202 3101581 . - 0 ID=CDS:Rv2791c;Parent=transcript:Rv2791c;protein_id=Rv2791c ### -Chromosome ena gene 3101581 3102162 . - . ID=gene:Rv2792c;biotype=protein_coding;description=Possible resolvase;gene_id=Rv2792c;logic_name=ena +Chromosome ena gene 3101581 3102162 . - . ID=gene:Rv2792c;biotype=protein_coding;description=Possible resolvase;gene_id=Rv2792c;logic_name=ena Chromosome ena mRNA 3101581 3102162 . - . ID=transcript:Rv2792c;Parent=gene:Rv2792c;biotype=protein_coding;transcript_id=Rv2792c Chromosome ena exon 3101581 3102162 . - . Parent=transcript:Rv2792c;Name=Rv2792c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2792c-1;rank=1 Chromosome ena CDS 3101581 3102162 . - 0 ID=CDS:Rv2792c;Parent=transcript:Rv2792c;protein_id=Rv2792c ### -Chromosome ena gene 3102364 3103260 . - . ID=gene:Rv2793c;Name=truB;biotype=protein_coding;description=Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase);gene_id=Rv2793c;logic_name=ena +Chromosome ena gene 3102364 3103260 . - . ID=gene:Rv2793c;Name=truB;biotype=protein_coding;description=Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase);gene_id=Rv2793c;logic_name=ena Chromosome ena mRNA 3102364 3103260 . - . ID=transcript:Rv2793c;Parent=gene:Rv2793c;Name=truB-1;biotype=protein_coding;transcript_id=Rv2793c Chromosome ena exon 3102364 3103260 . - . Parent=transcript:Rv2793c;Name=Rv2793c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2793c-1;rank=1 Chromosome ena CDS 3102364 3103260 . - 0 ID=CDS:Rv2793c;Parent=transcript:Rv2793c;protein_id=Rv2793c ### -Chromosome ena gene 3103257 3103940 . - . ID=gene:Rv2794c;Name=pptT;biotype=protein_coding;description=Phosphopantetheinyl transferase PptT (CoA:APO-[ACP]pantetheinephosphotransferase) (CoA:APO-[acyl-carrier protein]pantetheinephosphotransferase);gene_id=Rv2794c;logic_name=ena +Chromosome ena gene 3103257 3103940 . - . ID=gene:Rv2794c;Name=pptT;biotype=protein_coding;description=Phosphopantetheinyl transferase PptT (CoA:APO-[ACP]pantetheinephosphotransferase) (CoA:APO-[acyl-carrier protein]pantetheinephosphotransferase);gene_id=Rv2794c;logic_name=ena Chromosome ena mRNA 3103257 3103940 . - . ID=transcript:Rv2794c;Parent=gene:Rv2794c;Name=pptT-1;biotype=protein_coding;transcript_id=Rv2794c Chromosome ena exon 3103257 3103940 . - . Parent=transcript:Rv2794c;Name=Rv2794c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2794c-1;rank=1 Chromosome ena CDS 3103257 3103940 . - 0 ID=CDS:Rv2794c;Parent=transcript:Rv2794c;protein_id=Rv2794c ### -Chromosome ena gene 3103937 3104911 . - . ID=gene:Rv2795c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2795c;logic_name=ena +Chromosome ena gene 3103937 3104911 . - . ID=gene:Rv2795c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2795c;logic_name=ena Chromosome ena mRNA 3103937 3104911 . - . ID=transcript:Rv2795c;Parent=gene:Rv2795c;biotype=protein_coding;transcript_id=Rv2795c Chromosome ena exon 3103937 3104911 . - . Parent=transcript:Rv2795c;Name=Rv2795c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2795c-1;rank=1 Chromosome ena CDS 3103937 3104911 . - 0 ID=CDS:Rv2795c;Parent=transcript:Rv2795c;protein_id=Rv2795c ### -Chromosome ena gene 3105056 3105619 . - . ID=gene:Rv2796c;Name=lppV;biotype=protein_coding;description=Probable conserved lipoprotein LppV;gene_id=Rv2796c;logic_name=ena +Chromosome ena gene 3105056 3105619 . - . ID=gene:Rv2796c;Name=lppV;biotype=protein_coding;description=Probable conserved lipoprotein LppV;gene_id=Rv2796c;logic_name=ena Chromosome ena mRNA 3105056 3105619 . - . ID=transcript:Rv2796c;Parent=gene:Rv2796c;Name=lppV-1;biotype=protein_coding;transcript_id=Rv2796c Chromosome ena exon 3105056 3105619 . - . Parent=transcript:Rv2796c;Name=Rv2796c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2796c-1;rank=1 Chromosome ena CDS 3105056 3105619 . - 0 ID=CDS:Rv2796c;Parent=transcript:Rv2796c;protein_id=Rv2796c ### -Chromosome ena gene 3105619 3107307 . - . ID=gene:Rv2797c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2797c;logic_name=ena +Chromosome ena gene 3105619 3107307 . - . ID=gene:Rv2797c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2797c;logic_name=ena Chromosome ena mRNA 3105619 3107307 . - . ID=transcript:Rv2797c;Parent=gene:Rv2797c;biotype=protein_coding;transcript_id=Rv2797c Chromosome ena exon 3105619 3107307 . - . Parent=transcript:Rv2797c;Name=Rv2797c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2797c-1;rank=1 Chromosome ena CDS 3105619 3107307 . - 0 ID=CDS:Rv2797c;Parent=transcript:Rv2797c;protein_id=Rv2797c ### -Chromosome ena gene 3107311 3107637 . - . ID=gene:Rv2798c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2798c;logic_name=ena +Chromosome ena gene 3107311 3107637 . - . ID=gene:Rv2798c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2798c;logic_name=ena Chromosome ena mRNA 3107311 3107637 . - . ID=transcript:Rv2798c;Parent=gene:Rv2798c;biotype=protein_coding;transcript_id=Rv2798c Chromosome ena exon 3107311 3107637 . - . Parent=transcript:Rv2798c;Name=Rv2798c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2798c-1;rank=1 Chromosome ena CDS 3107311 3107637 . - 0 ID=CDS:Rv2798c;Parent=transcript:Rv2798c;protein_id=Rv2798c ### -Chromosome ena gene 3107768 3108397 . + . ID=gene:Rv2799;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2799;logic_name=ena +Chromosome ena gene 3107768 3108397 . + . ID=gene:Rv2799;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv2799;logic_name=ena Chromosome ena mRNA 3107768 3108397 . + . ID=transcript:Rv2799;Parent=gene:Rv2799;biotype=protein_coding;transcript_id=Rv2799 Chromosome ena exon 3107768 3108397 . + . Parent=transcript:Rv2799;Name=Rv2799-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2799-1;rank=1 Chromosome ena CDS 3107768 3108397 . + 0 ID=CDS:Rv2799;Parent=transcript:Rv2799;protein_id=Rv2799 ### -Chromosome ena gene 3108416 3110065 . + . ID=gene:Rv2800;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv2800;logic_name=ena +Chromosome ena gene 3108416 3110065 . + . ID=gene:Rv2800;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv2800;logic_name=ena Chromosome ena mRNA 3108416 3110065 . + . ID=transcript:Rv2800;Parent=gene:Rv2800;biotype=protein_coding;transcript_id=Rv2800 Chromosome ena exon 3108416 3110065 . + . Parent=transcript:Rv2800;Name=Rv2800-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2800-1;rank=1 Chromosome ena CDS 3108416 3110065 . + 0 ID=CDS:Rv2800;Parent=transcript:Rv2800;protein_id=Rv2800 ### -Chromosome ena gene 3110167 3110523 . - . ID=gene:Rv2801c;Name=mazF9;biotype=protein_coding;description=Toxin MazF9;gene_id=Rv2801c;logic_name=ena +Chromosome ena gene 3110167 3110523 . - . ID=gene:Rv2801c;Name=mazF9;biotype=protein_coding;description=Toxin MazF9;gene_id=Rv2801c;logic_name=ena Chromosome ena mRNA 3110167 3110523 . - . ID=transcript:Rv2801c;Parent=gene:Rv2801c;Name=mazF9-1;biotype=protein_coding;transcript_id=Rv2801c Chromosome ena exon 3110167 3110523 . - . Parent=transcript:Rv2801c;Name=Rv2801c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2801c-1;rank=1 Chromosome ena CDS 3110167 3110523 . - 0 ID=CDS:Rv2801c;Parent=transcript:Rv2801c;protein_id=Rv2801c ### -Chromosome ena gene 3110507 3110737 . - . ID=gene:Rv2801A;Name=mazE9;biotype=protein_coding;description=Possible antitoxin MazE9;gene_id=Rv2801A;logic_name=ena +Chromosome ena gene 3110507 3110737 . - . ID=gene:Rv2801A;Name=mazE9;biotype=protein_coding;description=Possible antitoxin MazE9;gene_id=Rv2801A;logic_name=ena Chromosome ena mRNA 3110507 3110737 . - . ID=transcript:Rv2801A;Parent=gene:Rv2801A;Name=mazE9-1;biotype=protein_coding;transcript_id=Rv2801A Chromosome ena exon 3110507 3110737 . - . Parent=transcript:Rv2801A;Name=Rv2801A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2801A-1;rank=1 Chromosome ena CDS 3110507 3110737 . - 0 ID=CDS:Rv2801A;Parent=transcript:Rv2801A;protein_id=Rv2801A ### -Chromosome ena gene 3110780 3111823 . - . ID=gene:Rv2802c;biotype=protein_coding;description=Hypothetical arginine and alanine rich protein;gene_id=Rv2802c;logic_name=ena +Chromosome ena gene 3110780 3111823 . - . ID=gene:Rv2802c;biotype=protein_coding;description=Hypothetical arginine and alanine rich protein;gene_id=Rv2802c;logic_name=ena Chromosome ena mRNA 3110780 3111823 . - . ID=transcript:Rv2802c;Parent=gene:Rv2802c;biotype=protein_coding;transcript_id=Rv2802c Chromosome ena exon 3110780 3111823 . - . Parent=transcript:Rv2802c;Name=Rv2802c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2802c-1;rank=1 Chromosome ena CDS 3110780 3111823 . - 0 ID=CDS:Rv2802c;Parent=transcript:Rv2802c;protein_id=Rv2802c ### -Chromosome ena gene 3111822 3112289 . + . ID=gene:Rv2803;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2803;logic_name=ena +Chromosome ena gene 3111822 3112289 . + . ID=gene:Rv2803;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2803;logic_name=ena Chromosome ena mRNA 3111822 3112289 . + . ID=transcript:Rv2803;Parent=gene:Rv2803;biotype=protein_coding;transcript_id=Rv2803 Chromosome ena exon 3111822 3112289 . + . Parent=transcript:Rv2803;Name=Rv2803-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2803-1;rank=1 Chromosome ena CDS 3111822 3112289 . + 0 ID=CDS:Rv2803;Parent=transcript:Rv2803;protein_id=Rv2803 ### -Chromosome ena gene 3112465 3113094 . - . ID=gene:Rv2804c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2804c;logic_name=ena +Chromosome ena gene 3112465 3113094 . - . ID=gene:Rv2804c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2804c;logic_name=ena Chromosome ena mRNA 3112465 3113094 . - . ID=transcript:Rv2804c;Parent=gene:Rv2804c;biotype=protein_coding;transcript_id=Rv2804c Chromosome ena exon 3112465 3113094 . - . Parent=transcript:Rv2804c;Name=Rv2804c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2804c-1;rank=1 Chromosome ena CDS 3112465 3113094 . - 0 ID=CDS:Rv2804c;Parent=transcript:Rv2804c;protein_id=Rv2804c ### -Chromosome ena gene 3112867 3113271 . + . ID=gene:Rv2805;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2805;logic_name=ena +Chromosome ena gene 3112867 3113271 . + . ID=gene:Rv2805;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2805;logic_name=ena Chromosome ena mRNA 3112867 3113271 . + . ID=transcript:Rv2805;Parent=gene:Rv2805;biotype=protein_coding;transcript_id=Rv2805 Chromosome ena exon 3112867 3113271 . + . Parent=transcript:Rv2805;Name=Rv2805-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2805-1;rank=1 Chromosome ena CDS 3112867 3113271 . + 0 ID=CDS:Rv2805;Parent=transcript:Rv2805;protein_id=Rv2805 ### -Chromosome ena gene 3113268 3113459 . + . ID=gene:Rv2806;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv2806;logic_name=ena +Chromosome ena gene 3113268 3113459 . + . ID=gene:Rv2806;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv2806;logic_name=ena Chromosome ena mRNA 3113268 3113459 . + . ID=transcript:Rv2806;Parent=gene:Rv2806;biotype=protein_coding;transcript_id=Rv2806 Chromosome ena exon 3113268 3113459 . + . Parent=transcript:Rv2806;Name=Rv2806-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2806-1;rank=1 Chromosome ena CDS 3113268 3113459 . + 0 ID=CDS:Rv2806;Parent=transcript:Rv2806;protein_id=Rv2806 ### -Chromosome ena gene 3113658 3114812 . + . ID=gene:Rv2807;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2807;logic_name=ena +Chromosome ena gene 3113658 3114812 . + . ID=gene:Rv2807;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2807;logic_name=ena Chromosome ena mRNA 3113658 3114812 . + . ID=transcript:Rv2807;Parent=gene:Rv2807;biotype=protein_coding;transcript_id=Rv2807 Chromosome ena exon 3113658 3114812 . + . Parent=transcript:Rv2807;Name=Rv2807-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2807-1;rank=1 Chromosome ena CDS 3113658 3114812 . + 0 ID=CDS:Rv2807;Parent=transcript:Rv2807;protein_id=Rv2807 ### -Chromosome ena gene 3115046 3115303 . + . ID=gene:Rv2808;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2808;logic_name=ena +Chromosome ena gene 3115046 3115303 . + . ID=gene:Rv2808;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2808;logic_name=ena Chromosome ena mRNA 3115046 3115303 . + . ID=transcript:Rv2808;Parent=gene:Rv2808;biotype=protein_coding;transcript_id=Rv2808 Chromosome ena exon 3115046 3115303 . + . Parent=transcript:Rv2808;Name=Rv2808-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2808-1;rank=1 Chromosome ena CDS 3115046 3115303 . + 0 ID=CDS:Rv2808;Parent=transcript:Rv2808;protein_id=Rv2808 ### -Chromosome ena gene 3115408 3115719 . + . ID=gene:Rv2809;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2809;logic_name=ena +Chromosome ena gene 3115408 3115719 . + . ID=gene:Rv2809;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2809;logic_name=ena Chromosome ena mRNA 3115408 3115719 . + . ID=transcript:Rv2809;Parent=gene:Rv2809;biotype=protein_coding;transcript_id=Rv2809 Chromosome ena exon 3115408 3115719 . + . Parent=transcript:Rv2809;Name=Rv2809-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2809-1;rank=1 Chromosome ena CDS 3115408 3115719 . + 0 ID=CDS:Rv2809;Parent=transcript:Rv2809;protein_id=Rv2809 ### -Chromosome ena gene 3115741 3116142 . - . ID=gene:Rv2810c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2810c;logic_name=ena +Chromosome ena gene 3115741 3116142 . - . ID=gene:Rv2810c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2810c;logic_name=ena Chromosome ena mRNA 3115741 3116142 . - . ID=transcript:Rv2810c;Parent=gene:Rv2810c;biotype=protein_coding;transcript_id=Rv2810c Chromosome ena exon 3115741 3116142 . - . Parent=transcript:Rv2810c;Name=Rv2810c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2810c-1;rank=1 Chromosome ena CDS 3115741 3116142 . - 0 ID=CDS:Rv2810c;Parent=transcript:Rv2810c;protein_id=Rv2810c ### -Chromosome ena_mobile_element biological_region 3115744 3116142 . - . external_name=Rv2810c%3B IS1555'%2C len: 399 nt. Probable defective Insertion sequence element%2C IS1555. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element -Chromosome ena gene 3116139 3116747 . + . ID=gene:Rv2811;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2811;logic_name=ena +Chromosome ena_mobile_element biological_region 3115744 3116142 . - . external_name=Rv2810c%3B IS1555'%2C len: 399 nt. Probable defective Insertion sequence element%2C IS1555. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C2007).;logic_name=ena_mobile_element +Chromosome ena gene 3116139 3116747 . + . ID=gene:Rv2811;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2811;logic_name=ena Chromosome ena mRNA 3116139 3116747 . + . ID=transcript:Rv2811;Parent=gene:Rv2811;biotype=protein_coding;transcript_id=Rv2811 Chromosome ena exon 3116139 3116747 . + . Parent=transcript:Rv2811;Name=Rv2811-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2811-1;rank=1 Chromosome ena CDS 3116139 3116747 . + 0 ID=CDS:Rv2811;Parent=transcript:Rv2811;protein_id=Rv2811 ### -Chromosome ena_mobile_element biological_region 3116817 3118225 . + . external_name=IS1604%2C len: 1409 nt. Insertion sequence IS1604. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 3116818 3118227 . + . ID=gene:Rv2812;biotype=protein_coding;description=Probable transposase;gene_id=Rv2812;logic_name=ena +Chromosome ena_mobile_element biological_region 3116817 3118225 . + . external_name=IS1604%2C len: 1409 nt. Insertion sequence IS1604. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 3116818 3118227 . + . ID=gene:Rv2812;biotype=protein_coding;description=Probable transposase;gene_id=Rv2812;logic_name=ena Chromosome ena mRNA 3116818 3118227 . + . ID=transcript:Rv2812;Parent=gene:Rv2812;biotype=protein_coding;transcript_id=Rv2812 Chromosome ena exon 3116818 3118227 . + . Parent=transcript:Rv2812;Name=Rv2812-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2812-1;rank=1 Chromosome ena CDS 3116818 3118227 . + 0 ID=CDS:Rv2812;Parent=transcript:Rv2812;protein_id=Rv2812 ### -Chromosome ena gene 3118224 3119036 . + . ID=gene:Rv2813;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2813;logic_name=ena +Chromosome ena gene 3118224 3119036 . + . ID=gene:Rv2813;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2813;logic_name=ena Chromosome ena mRNA 3118224 3119036 . + . ID=transcript:Rv2813;Parent=gene:Rv2813;biotype=protein_coding;transcript_id=Rv2813 Chromosome ena exon 3118224 3119036 . + . Parent=transcript:Rv2813;Name=Rv2813-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2813-1;rank=1 Chromosome ena CDS 3118224 3119036 . + 0 ID=CDS:Rv2813;Parent=transcript:Rv2813;protein_id=Rv2813 ### -Chromosome ena_mobile_element biological_region 3120523 3121897 . - . external_name=IS6110-11%2C len: 1375 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 3120566 3121552 . - . ID=gene:Rv2814c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2814c;logic_name=ena +Chromosome ena_mobile_element biological_region 3120523 3121897 . - . external_name=IS6110-11%2C len: 1375 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 3120566 3121552 . - . ID=gene:Rv2814c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2814c;logic_name=ena Chromosome ena mRNA 3120566 3121552 . - . ID=transcript:Rv2814c;Parent=gene:Rv2814c;biotype=protein_coding;transcript_id=Rv2814c Chromosome ena exon 3120566 3121552 . - . Parent=transcript:Rv2814c;Name=Rv2814c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2814c-1;rank=1 Chromosome ena CDS 3120566 3121552 . - 0 ID=CDS:Rv2814c;Parent=transcript:Rv2814c;protein_id=Rv2814c ### -Chromosome ena gene 3121501 3121827 . - . ID=gene:Rv2815c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2815c;logic_name=ena +Chromosome ena gene 3121501 3121827 . - . ID=gene:Rv2815c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2815c;logic_name=ena Chromosome ena mRNA 3121501 3121827 . - . ID=transcript:Rv2815c;Parent=gene:Rv2815c;biotype=protein_coding;transcript_id=Rv2815c Chromosome ena exon 3121501 3121827 . - . Parent=transcript:Rv2815c;Name=Rv2815c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2815c-1;rank=1 Chromosome ena CDS 3121501 3121827 . - 0 ID=CDS:Rv2815c;Parent=transcript:Rv2815c;protein_id=Rv2815c ### -Chromosome ena gene 3123625 3123966 . - . ID=gene:Rv2816c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2816c;logic_name=ena +Chromosome ena gene 3123625 3123966 . - . ID=gene:Rv2816c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2816c;logic_name=ena Chromosome ena mRNA 3123625 3123966 . - . ID=transcript:Rv2816c;Parent=gene:Rv2816c;biotype=protein_coding;transcript_id=Rv2816c Chromosome ena exon 3123625 3123966 . - . Parent=transcript:Rv2816c;Name=Rv2816c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2816c-1;rank=1 Chromosome ena CDS 3123625 3123966 . - 0 ID=CDS:Rv2816c;Parent=transcript:Rv2816c;protein_id=Rv2816c ### -Chromosome ena gene 3123967 3124983 . - . ID=gene:Rv2817c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2817c;logic_name=ena +Chromosome ena gene 3123967 3124983 . - . ID=gene:Rv2817c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2817c;logic_name=ena Chromosome ena mRNA 3123967 3124983 . - . ID=transcript:Rv2817c;Parent=gene:Rv2817c;biotype=protein_coding;transcript_id=Rv2817c Chromosome ena exon 3123967 3124983 . - . Parent=transcript:Rv2817c;Name=Rv2817c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2817c-1;rank=1 Chromosome ena CDS 3123967 3124983 . - 0 ID=CDS:Rv2817c;Parent=transcript:Rv2817c;protein_id=Rv2817c ### -Chromosome ena gene 3124996 3126144 . - . ID=gene:Rv2818c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2818c;logic_name=ena +Chromosome ena gene 3124996 3126144 . - . ID=gene:Rv2818c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2818c;logic_name=ena Chromosome ena mRNA 3124996 3126144 . - . ID=transcript:Rv2818c;Parent=gene:Rv2818c;biotype=protein_coding;transcript_id=Rv2818c Chromosome ena exon 3124996 3126144 . - . Parent=transcript:Rv2818c;Name=Rv2818c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2818c-1;rank=1 Chromosome ena CDS 3124996 3126144 . - 0 ID=CDS:Rv2818c;Parent=transcript:Rv2818c;protein_id=Rv2818c ### -Chromosome ena gene 3126240 3127367 . - . ID=gene:Rv2819c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2819c;logic_name=ena +Chromosome ena gene 3126240 3127367 . - . ID=gene:Rv2819c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2819c;logic_name=ena Chromosome ena mRNA 3126240 3127367 . - . ID=transcript:Rv2819c;Parent=gene:Rv2819c;biotype=protein_coding;transcript_id=Rv2819c Chromosome ena exon 3126240 3127367 . - . Parent=transcript:Rv2819c;Name=Rv2819c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2819c-1;rank=1 Chromosome ena CDS 3126240 3127367 . - 0 ID=CDS:Rv2819c;Parent=transcript:Rv2819c;protein_id=Rv2819c ### -Chromosome ena gene 3127364 3128272 . - . ID=gene:Rv2820c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2820c;logic_name=ena +Chromosome ena gene 3127364 3128272 . - . ID=gene:Rv2820c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2820c;logic_name=ena Chromosome ena mRNA 3127364 3128272 . - . ID=transcript:Rv2820c;Parent=gene:Rv2820c;biotype=protein_coding;transcript_id=Rv2820c Chromosome ena exon 3127364 3128272 . - . Parent=transcript:Rv2820c;Name=Rv2820c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2820c-1;rank=1 Chromosome ena CDS 3127364 3128272 . - 0 ID=CDS:Rv2820c;Parent=transcript:Rv2820c;protein_id=Rv2820c ### -Chromosome ena gene 3128253 3128963 . - . ID=gene:Rv2821c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2821c;logic_name=ena +Chromosome ena gene 3128253 3128963 . - . ID=gene:Rv2821c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2821c;logic_name=ena Chromosome ena mRNA 3128253 3128963 . - . ID=transcript:Rv2821c;Parent=gene:Rv2821c;biotype=protein_coding;transcript_id=Rv2821c Chromosome ena exon 3128253 3128963 . - . Parent=transcript:Rv2821c;Name=Rv2821c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2821c-1;rank=1 Chromosome ena CDS 3128253 3128963 . - 0 ID=CDS:Rv2821c;Parent=transcript:Rv2821c;protein_id=Rv2821c ### -Chromosome ena gene 3128973 3129347 . - . ID=gene:Rv2822c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2822c;logic_name=ena +Chromosome ena gene 3128973 3129347 . - . ID=gene:Rv2822c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2822c;logic_name=ena Chromosome ena mRNA 3128973 3129347 . - . ID=transcript:Rv2822c;Parent=gene:Rv2822c;biotype=protein_coding;transcript_id=Rv2822c Chromosome ena exon 3128973 3129347 . - . Parent=transcript:Rv2822c;Name=Rv2822c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2822c-1;rank=1 Chromosome ena CDS 3128973 3129347 . - 0 ID=CDS:Rv2822c;Parent=transcript:Rv2822c;protein_id=Rv2822c ### -Chromosome ena gene 3129344 3131773 . - . ID=gene:Rv2823c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2823c;logic_name=ena +Chromosome ena gene 3129344 3131773 . - . ID=gene:Rv2823c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2823c;logic_name=ena Chromosome ena mRNA 3129344 3131773 . - . ID=transcript:Rv2823c;Parent=gene:Rv2823c;biotype=protein_coding;transcript_id=Rv2823c Chromosome ena exon 3129344 3131773 . - . Parent=transcript:Rv2823c;Name=Rv2823c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2823c-1;rank=1 Chromosome ena CDS 3129344 3131773 . - 0 ID=CDS:Rv2823c;Parent=transcript:Rv2823c;protein_id=Rv2823c ### -Chromosome ena gene 3131770 3132714 . - . ID=gene:Rv2824c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2824c;logic_name=ena +Chromosome ena gene 3131770 3132714 . - . ID=gene:Rv2824c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2824c;logic_name=ena Chromosome ena mRNA 3131770 3132714 . - . ID=transcript:Rv2824c;Parent=gene:Rv2824c;biotype=protein_coding;transcript_id=Rv2824c Chromosome ena exon 3131770 3132714 . - . Parent=transcript:Rv2824c;Name=Rv2824c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2824c-1;rank=1 Chromosome ena CDS 3131770 3132714 . - 0 ID=CDS:Rv2824c;Parent=transcript:Rv2824c;protein_id=Rv2824c ### -Chromosome ena gene 3132892 3133539 . - . ID=gene:Rv2825c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2825c;logic_name=ena +Chromosome ena gene 3132892 3133539 . - . ID=gene:Rv2825c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2825c;logic_name=ena Chromosome ena mRNA 3132892 3133539 . - . ID=transcript:Rv2825c;Parent=gene:Rv2825c;biotype=protein_coding;transcript_id=Rv2825c Chromosome ena exon 3132892 3133539 . - . Parent=transcript:Rv2825c;Name=Rv2825c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2825c-1;rank=1 Chromosome ena CDS 3132892 3133539 . - 0 ID=CDS:Rv2825c;Parent=transcript:Rv2825c;protein_id=Rv2825c ### -Chromosome ena gene 3133709 3134593 . - . ID=gene:Rv2826c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2826c;logic_name=ena +Chromosome ena gene 3133709 3134593 . - . ID=gene:Rv2826c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2826c;logic_name=ena Chromosome ena mRNA 3133709 3134593 . - . ID=transcript:Rv2826c;Parent=gene:Rv2826c;biotype=protein_coding;transcript_id=Rv2826c Chromosome ena exon 3133709 3134593 . - . Parent=transcript:Rv2826c;Name=Rv2826c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2826c-1;rank=1 Chromosome ena CDS 3133709 3134593 . - 0 ID=CDS:Rv2826c;Parent=transcript:Rv2826c;protein_id=Rv2826c ### -Chromosome ena gene 3134596 3135483 . - . ID=gene:Rv2827c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2827c;logic_name=ena +Chromosome ena gene 3134596 3135483 . - . ID=gene:Rv2827c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2827c;logic_name=ena Chromosome ena mRNA 3134596 3135483 . - . ID=transcript:Rv2827c;Parent=gene:Rv2827c;biotype=protein_coding;transcript_id=Rv2827c Chromosome ena exon 3134596 3135483 . - . Parent=transcript:Rv2827c;Name=Rv2827c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2827c-1;rank=1 Chromosome ena CDS 3134596 3135483 . - 0 ID=CDS:Rv2827c;Parent=transcript:Rv2827c;protein_id=Rv2827c ### -Chromosome ena gene 3135788 3136333 . - . ID=gene:Rv2828c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2828c;logic_name=ena +Chromosome ena gene 3135788 3136333 . - . ID=gene:Rv2828c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2828c;logic_name=ena Chromosome ena mRNA 3135788 3136333 . - . ID=transcript:Rv2828c;Parent=gene:Rv2828c;biotype=protein_coding;transcript_id=Rv2828c Chromosome ena exon 3135788 3136333 . - . Parent=transcript:Rv2828c;Name=Rv2828c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2828c-1;rank=1 Chromosome ena CDS 3135788 3136333 . - 0 ID=CDS:Rv2828c;Parent=transcript:Rv2828c;protein_id=Rv2828c ### -Chromosome ena gene 3136330 3136599 . - . ID=gene:Rv2828A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2828A;logic_name=ena +Chromosome ena gene 3136330 3136599 . - . ID=gene:Rv2828A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2828A;logic_name=ena Chromosome ena mRNA 3136330 3136599 . - . ID=transcript:Rv2828A;Parent=gene:Rv2828A;biotype=protein_coding;transcript_id=Rv2828A Chromosome ena exon 3136330 3136599 . - . Parent=transcript:Rv2828A;Name=Rv2828A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2828A-1;rank=1 Chromosome ena CDS 3136330 3136599 . - 0 ID=CDS:Rv2828A;Parent=transcript:Rv2828A;protein_id=Rv2828A ### -Chromosome ena gene 3136620 3137012 . - . ID=gene:Rv2829c;Name=vapC22;biotype=protein_coding;description=Possible toxin VapC22;gene_id=Rv2829c;logic_name=ena +Chromosome ena gene 3136620 3137012 . - . ID=gene:Rv2829c;Name=vapC22;biotype=protein_coding;description=Possible toxin VapC22;gene_id=Rv2829c;logic_name=ena Chromosome ena mRNA 3136620 3137012 . - . ID=transcript:Rv2829c;Parent=gene:Rv2829c;Name=vapC22-1;biotype=protein_coding;transcript_id=Rv2829c Chromosome ena exon 3136620 3137012 . - . Parent=transcript:Rv2829c;Name=Rv2829c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2829c-1;rank=1 Chromosome ena CDS 3136620 3137012 . - 0 ID=CDS:Rv2829c;Parent=transcript:Rv2829c;protein_id=Rv2829c ### -Chromosome ena gene 3137009 3137224 . - . ID=gene:Rv2830c;Name=vapB22;biotype=protein_coding;description=Possible antitoxin VapB22;gene_id=Rv2830c;logic_name=ena +Chromosome ena gene 3137009 3137224 . - . ID=gene:Rv2830c;Name=vapB22;biotype=protein_coding;description=Possible antitoxin VapB22;gene_id=Rv2830c;logic_name=ena Chromosome ena mRNA 3137009 3137224 . - . ID=transcript:Rv2830c;Parent=gene:Rv2830c;Name=vapB22-1;biotype=protein_coding;transcript_id=Rv2830c Chromosome ena exon 3137009 3137224 . - . Parent=transcript:Rv2830c;Name=Rv2830c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2830c-1;rank=1 Chromosome ena CDS 3137009 3137224 . - 0 ID=CDS:Rv2830c;Parent=transcript:Rv2830c;protein_id=Rv2830c ### -Chromosome ena gene 3137271 3138020 . + . ID=gene:Rv2831;Name=echA16;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA16 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2831;logic_name=ena +Chromosome ena gene 3137271 3138020 . + . ID=gene:Rv2831;Name=echA16;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA16 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv2831;logic_name=ena Chromosome ena mRNA 3137271 3138020 . + . ID=transcript:Rv2831;Parent=gene:Rv2831;Name=echA16-1;biotype=protein_coding;transcript_id=Rv2831 Chromosome ena exon 3137271 3138020 . + . Parent=transcript:Rv2831;Name=Rv2831-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2831-1;rank=1 Chromosome ena CDS 3137271 3138020 . + 0 ID=CDS:Rv2831;Parent=transcript:Rv2831;protein_id=Rv2831 ### -Chromosome ena gene 3138099 3139181 . - . ID=gene:Rv2832c;Name=ugpC;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport ATP-binding protein ABC transporter UgpC;gene_id=Rv2832c;logic_name=ena +Chromosome ena gene 3138099 3139181 . - . ID=gene:Rv2832c;Name=ugpC;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport ATP-binding protein ABC transporter UgpC;gene_id=Rv2832c;logic_name=ena Chromosome ena mRNA 3138099 3139181 . - . ID=transcript:Rv2832c;Parent=gene:Rv2832c;Name=ugpC-1;biotype=protein_coding;transcript_id=Rv2832c Chromosome ena exon 3138099 3139181 . - . Parent=transcript:Rv2832c;Name=Rv2832c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2832c-1;rank=1 Chromosome ena CDS 3138099 3139181 . - 0 ID=CDS:Rv2832c;Parent=transcript:Rv2832c;protein_id=Rv2832c ### -Chromosome ena gene 3139174 3140484 . - . ID=gene:Rv2833c;Name=ugpB;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate-binding lipoprotein UgpB;gene_id=Rv2833c;logic_name=ena +Chromosome ena gene 3139174 3140484 . - . ID=gene:Rv2833c;Name=ugpB;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate-binding lipoprotein UgpB;gene_id=Rv2833c;logic_name=ena Chromosome ena mRNA 3139174 3140484 . - . ID=transcript:Rv2833c;Parent=gene:Rv2833c;Name=ugpB-1;biotype=protein_coding;transcript_id=Rv2833c Chromosome ena exon 3139174 3140484 . - . Parent=transcript:Rv2833c;Name=Rv2833c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2833c-1;rank=1 Chromosome ena CDS 3139174 3140484 . - 0 ID=CDS:Rv2833c;Parent=transcript:Rv2833c;protein_id=Rv2833c ### -Chromosome ena gene 3140487 3141314 . - . ID=gene:Rv2834c;Name=ugpE;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpE;gene_id=Rv2834c;logic_name=ena +Chromosome ena gene 3140487 3141314 . - . ID=gene:Rv2834c;Name=ugpE;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpE;gene_id=Rv2834c;logic_name=ena Chromosome ena mRNA 3140487 3141314 . - . ID=transcript:Rv2834c;Parent=gene:Rv2834c;Name=ugpE-1;biotype=protein_coding;transcript_id=Rv2834c Chromosome ena exon 3140487 3141314 . - . Parent=transcript:Rv2834c;Name=Rv2834c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2834c-1;rank=1 Chromosome ena CDS 3140487 3141314 . - 0 ID=CDS:Rv2834c;Parent=transcript:Rv2834c;protein_id=Rv2834c ### -Chromosome ena gene 3141311 3142222 . - . ID=gene:Rv2835c;Name=ugpA;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpA;gene_id=Rv2835c;logic_name=ena +Chromosome ena gene 3141311 3142222 . - . ID=gene:Rv2835c;Name=ugpA;biotype=protein_coding;description=Probable Sn-glycerol-3-phosphate transport integral membrane protein ABC transporter UgpA;gene_id=Rv2835c;logic_name=ena Chromosome ena mRNA 3141311 3142222 . - . ID=transcript:Rv2835c;Parent=gene:Rv2835c;Name=ugpA-1;biotype=protein_coding;transcript_id=Rv2835c Chromosome ena exon 3141311 3142222 . - . Parent=transcript:Rv2835c;Name=Rv2835c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2835c-1;rank=1 Chromosome ena CDS 3141311 3142222 . - 0 ID=CDS:Rv2835c;Parent=transcript:Rv2835c;protein_id=Rv2835c ### -Chromosome ena gene 3142309 3143628 . - . ID=gene:Rv2836c;Name=dinF;biotype=protein_coding;description=Possible DNA-damage-inducible protein F DinF;gene_id=Rv2836c;logic_name=ena +Chromosome ena gene 3142309 3143628 . - . ID=gene:Rv2836c;Name=dinF;biotype=protein_coding;description=Possible DNA-damage-inducible protein F DinF;gene_id=Rv2836c;logic_name=ena Chromosome ena mRNA 3142309 3143628 . - . ID=transcript:Rv2836c;Parent=gene:Rv2836c;Name=dinF-1;biotype=protein_coding;transcript_id=Rv2836c Chromosome ena exon 3142309 3143628 . - . Parent=transcript:Rv2836c;Name=Rv2836c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2836c-1;rank=1 Chromosome ena CDS 3142309 3143628 . - 0 ID=CDS:Rv2836c;Parent=transcript:Rv2836c;protein_id=Rv2836c ### -Chromosome ena gene 3143635 3144645 . - . ID=gene:Rv2837c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2837c;logic_name=ena +Chromosome ena gene 3143635 3144645 . - . ID=gene:Rv2837c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2837c;logic_name=ena Chromosome ena mRNA 3143635 3144645 . - . ID=transcript:Rv2837c;Parent=gene:Rv2837c;biotype=protein_coding;transcript_id=Rv2837c Chromosome ena exon 3143635 3144645 . - . Parent=transcript:Rv2837c;Name=Rv2837c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2837c-1;rank=1 Chromosome ena CDS 3143635 3144645 . - 0 ID=CDS:Rv2837c;Parent=transcript:Rv2837c;protein_id=Rv2837c ### -Chromosome ena gene 3144620 3145171 . - . ID=gene:Rv2838c;Name=rbfA;biotype=protein_coding;description=Probable ribosome-binding factor a RbfA (P15B protein);gene_id=Rv2838c;logic_name=ena +Chromosome ena gene 3144620 3145171 . - . ID=gene:Rv2838c;Name=rbfA;biotype=protein_coding;description=Probable ribosome-binding factor a RbfA (P15B protein);gene_id=Rv2838c;logic_name=ena Chromosome ena mRNA 3144620 3145171 . - . ID=transcript:Rv2838c;Parent=gene:Rv2838c;Name=rbfA-1;biotype=protein_coding;transcript_id=Rv2838c Chromosome ena exon 3144620 3145171 . - . Parent=transcript:Rv2838c;Name=Rv2838c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2838c-1;rank=1 Chromosome ena CDS 3144620 3145171 . - 0 ID=CDS:Rv2838c;Parent=transcript:Rv2838c;protein_id=Rv2838c ### -Chromosome ena gene 3145171 3147873 . - . ID=gene:Rv2839c;Name=infB;biotype=protein_coding;description=Probable translation initiation factor if-2 InfB;gene_id=Rv2839c;logic_name=ena +Chromosome ena gene 3145171 3147873 . - . ID=gene:Rv2839c;Name=infB;biotype=protein_coding;description=Probable translation initiation factor if-2 InfB;gene_id=Rv2839c;logic_name=ena Chromosome ena mRNA 3145171 3147873 . - . ID=transcript:Rv2839c;Parent=gene:Rv2839c;Name=infB-1;biotype=protein_coding;transcript_id=Rv2839c Chromosome ena exon 3145171 3147873 . - . Parent=transcript:Rv2839c;Name=Rv2839c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2839c-1;rank=1 Chromosome ena CDS 3145171 3147873 . - 0 ID=CDS:Rv2839c;Parent=transcript:Rv2839c;protein_id=Rv2839c ### -Chromosome ena gene 3147959 3148258 . - . ID=gene:Rv2840c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2840c;logic_name=ena +Chromosome ena gene 3147959 3148258 . - . ID=gene:Rv2840c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2840c;logic_name=ena Chromosome ena mRNA 3147959 3148258 . - . ID=transcript:Rv2840c;Parent=gene:Rv2840c;biotype=protein_coding;transcript_id=Rv2840c Chromosome ena exon 3147959 3148258 . - . Parent=transcript:Rv2840c;Name=Rv2840c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2840c-1;rank=1 Chromosome ena CDS 3147959 3148258 . - 0 ID=CDS:Rv2840c;Parent=transcript:Rv2840c;protein_id=Rv2840c ### -Chromosome ena gene 3148385 3149428 . - . ID=gene:Rv2841c;Name=nusA;biotype=protein_coding;description=Probable N utilization substance protein A NusA;gene_id=Rv2841c;logic_name=ena +Chromosome ena gene 3148385 3149428 . - . ID=gene:Rv2841c;Name=nusA;biotype=protein_coding;description=Probable N utilization substance protein A NusA;gene_id=Rv2841c;logic_name=ena Chromosome ena mRNA 3148385 3149428 . - . ID=transcript:Rv2841c;Parent=gene:Rv2841c;Name=nusA-1;biotype=protein_coding;transcript_id=Rv2841c Chromosome ena exon 3148385 3149428 . - . Parent=transcript:Rv2841c;Name=Rv2841c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2841c-1;rank=1 Chromosome ena CDS 3148385 3149428 . - 0 ID=CDS:Rv2841c;Parent=transcript:Rv2841c;protein_id=Rv2841c ### -Chromosome ena gene 3149425 3149976 . - . ID=gene:Rv2842c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2842c;logic_name=ena +Chromosome ena gene 3149425 3149976 . - . ID=gene:Rv2842c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2842c;logic_name=ena Chromosome ena mRNA 3149425 3149976 . - . ID=transcript:Rv2842c;Parent=gene:Rv2842c;biotype=protein_coding;transcript_id=Rv2842c Chromosome ena exon 3149425 3149976 . - . Parent=transcript:Rv2842c;Name=Rv2842c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2842c-1;rank=1 Chromosome ena CDS 3149425 3149976 . - 0 ID=CDS:Rv2842c;Parent=transcript:Rv2842c;protein_id=Rv2842c ### -Chromosome ena gene 3150171 3150716 . + . ID=gene:Rv2843;biotype=protein_coding;description=Probable conserved transmembrane alanine rich protein;gene_id=Rv2843;logic_name=ena +Chromosome ena gene 3150171 3150716 . + . ID=gene:Rv2843;biotype=protein_coding;description=Probable conserved transmembrane alanine rich protein;gene_id=Rv2843;logic_name=ena Chromosome ena mRNA 3150171 3150716 . + . ID=transcript:Rv2843;Parent=gene:Rv2843;biotype=protein_coding;transcript_id=Rv2843 Chromosome ena exon 3150171 3150716 . + . Parent=transcript:Rv2843;Name=Rv2843-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2843-1;rank=1 Chromosome ena CDS 3150171 3150716 . + 0 ID=CDS:Rv2843;Parent=transcript:Rv2843;protein_id=Rv2843 ### -Chromosome ena gene 3150713 3151201 . + . ID=gene:Rv2844;biotype=protein_coding;description=Conserved alanine rich protein;gene_id=Rv2844;logic_name=ena +Chromosome ena gene 3150713 3151201 . + . ID=gene:Rv2844;biotype=protein_coding;description=Conserved alanine rich protein;gene_id=Rv2844;logic_name=ena Chromosome ena mRNA 3150713 3151201 . + . ID=transcript:Rv2844;Parent=gene:Rv2844;biotype=protein_coding;transcript_id=Rv2844 Chromosome ena exon 3150713 3151201 . + . Parent=transcript:Rv2844;Name=Rv2844-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2844-1;rank=1 Chromosome ena CDS 3150713 3151201 . + 0 ID=CDS:Rv2844;Parent=transcript:Rv2844;protein_id=Rv2844 ### -Chromosome ena gene 3151202 3152950 . - . ID=gene:Rv2845c;Name=proS;biotype=protein_coding;description=Probable prolyl-tRNA synthetase ProS (proline--tRNA ligase) (PRORS) (global RNA synthesis factor) (proline translase);gene_id=Rv2845c;logic_name=ena +Chromosome ena gene 3151202 3152950 . - . ID=gene:Rv2845c;Name=proS;biotype=protein_coding;description=Probable prolyl-tRNA synthetase ProS (proline--tRNA ligase) (PRORS) (global RNA synthesis factor) (proline translase);gene_id=Rv2845c;logic_name=ena Chromosome ena mRNA 3151202 3152950 . - . ID=transcript:Rv2845c;Parent=gene:Rv2845c;Name=proS-1;biotype=protein_coding;transcript_id=Rv2845c Chromosome ena exon 3151202 3152950 . - . Parent=transcript:Rv2845c;Name=Rv2845c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2845c-1;rank=1 Chromosome ena CDS 3151202 3152950 . - 0 ID=CDS:Rv2845c;Parent=transcript:Rv2845c;protein_id=Rv2845c ### -Chromosome ena gene 3153039 3154631 . - . ID=gene:Rv2846c;Name=efpA;biotype=protein_coding;description=Possible integral membrane efflux protein EfpA;gene_id=Rv2846c;logic_name=ena +Chromosome ena gene 3153039 3154631 . - . ID=gene:Rv2846c;Name=efpA;biotype=protein_coding;description=Possible integral membrane efflux protein EfpA;gene_id=Rv2846c;logic_name=ena Chromosome ena mRNA 3153039 3154631 . - . ID=transcript:Rv2846c;Parent=gene:Rv2846c;Name=efpA-1;biotype=protein_coding;transcript_id=Rv2846c Chromosome ena exon 3153039 3154631 . - . Parent=transcript:Rv2846c;Name=Rv2846c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2846c-1;rank=1 Chromosome ena CDS 3153039 3154631 . - 0 ID=CDS:Rv2846c;Parent=transcript:Rv2846c;protein_id=Rv2846c ### -Chromosome ena gene 3154654 3155871 . - . ID=gene:Rv2847c;Name=cysG;biotype=protein_coding;description=Possible multifunctional enzyme siroheme synthase CysG: uroporphyrin-III C-methyltransferase (urogen III methylase) (SUMT) (uroporphyrinogen III methylase) (UROM) + precorrin-2 oxidase + ferrochelatase;gene_id=Rv2847c;logic_name=ena +Chromosome ena gene 3154654 3155871 . - . ID=gene:Rv2847c;Name=cysG;biotype=protein_coding;description=Possible multifunctional enzyme siroheme synthase CysG: uroporphyrin-III C-methyltransferase (urogen III methylase) (SUMT) (uroporphyrinogen III methylase) (UROM) + precorrin-2 oxidase + ferrochelatase;gene_id=Rv2847c;logic_name=ena Chromosome ena mRNA 3154654 3155871 . - . ID=transcript:Rv2847c;Parent=gene:Rv2847c;Name=cysG-1;biotype=protein_coding;transcript_id=Rv2847c Chromosome ena exon 3154654 3155871 . - . Parent=transcript:Rv2847c;Name=Rv2847c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2847c-1;rank=1 Chromosome ena CDS 3154654 3155871 . - 0 ID=CDS:Rv2847c;Parent=transcript:Rv2847c;protein_id=Rv2847c ### -Chromosome ena gene 3156148 3157521 . - . ID=gene:Rv2848c;Name=cobB;biotype=protein_coding;description=Probable cobyrinic acid A%2CC-diamide synthase CobB;gene_id=Rv2848c;logic_name=ena +Chromosome ena gene 3156148 3157521 . - . ID=gene:Rv2848c;Name=cobB;biotype=protein_coding;description=Probable cobyrinic acid A%2CC-diamide synthase CobB;gene_id=Rv2848c;logic_name=ena Chromosome ena mRNA 3156148 3157521 . - . ID=transcript:Rv2848c;Parent=gene:Rv2848c;Name=cobB-1;biotype=protein_coding;transcript_id=Rv2848c Chromosome ena exon 3156148 3157521 . - . Parent=transcript:Rv2848c;Name=Rv2848c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2848c-1;rank=1 Chromosome ena CDS 3156148 3157521 . - 0 ID=CDS:Rv2848c;Parent=transcript:Rv2848c;protein_id=Rv2848c ### -Chromosome ena gene 3157521 3158144 . - . ID=gene:Rv2849c;Name=cobO;biotype=protein_coding;description=Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity);gene_id=Rv2849c;logic_name=ena +Chromosome ena gene 3157521 3158144 . - . ID=gene:Rv2849c;Name=cobO;biotype=protein_coding;description=Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity);gene_id=Rv2849c;logic_name=ena Chromosome ena mRNA 3157521 3158144 . - . ID=transcript:Rv2849c;Parent=gene:Rv2849c;Name=cobO-1;biotype=protein_coding;transcript_id=Rv2849c Chromosome ena exon 3157521 3158144 . - . Parent=transcript:Rv2849c;Name=Rv2849c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2849c-1;rank=1 Chromosome ena CDS 3157521 3158144 . - 0 ID=CDS:Rv2849c;Parent=transcript:Rv2849c;protein_id=Rv2849c ### -Chromosome ena gene 3158165 3160054 . - . ID=gene:Rv2850c;biotype=protein_coding;description=Possible magnesium chelatase;gene_id=Rv2850c;logic_name=ena +Chromosome ena gene 3158165 3160054 . - . ID=gene:Rv2850c;biotype=protein_coding;description=Possible magnesium chelatase;gene_id=Rv2850c;logic_name=ena Chromosome ena mRNA 3158165 3160054 . - . ID=transcript:Rv2850c;Parent=gene:Rv2850c;biotype=protein_coding;transcript_id=Rv2850c Chromosome ena exon 3158165 3160054 . - . Parent=transcript:Rv2850c;Name=Rv2850c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2850c-1;rank=1 Chromosome ena CDS 3158165 3160054 . - 0 ID=CDS:Rv2850c;Parent=transcript:Rv2850c;protein_id=Rv2850c ### -Chromosome ena gene 3160051 3160521 . - . ID=gene:Rv2851c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2851c;logic_name=ena +Chromosome ena gene 3160051 3160521 . - . ID=gene:Rv2851c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2851c;logic_name=ena Chromosome ena mRNA 3160051 3160521 . - . ID=transcript:Rv2851c;Parent=gene:Rv2851c;biotype=protein_coding;transcript_id=Rv2851c Chromosome ena exon 3160051 3160521 . - . Parent=transcript:Rv2851c;Name=Rv2851c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2851c-1;rank=1 Chromosome ena CDS 3160051 3160521 . - 0 ID=CDS:Rv2851c;Parent=transcript:Rv2851c;protein_id=Rv2851c ### -Chromosome ena gene 3160580 3162061 . - . ID=gene:Rv2852c;Name=mqo;biotype=protein_coding;description=Probable malate:quinone oxidoreductase Mqo (malate dehydrogenase [acceptor]);gene_id=Rv2852c;logic_name=ena +Chromosome ena gene 3160580 3162061 . - . ID=gene:Rv2852c;Name=mqo;biotype=protein_coding;description=Probable malate:quinone oxidoreductase Mqo (malate dehydrogenase [acceptor]);gene_id=Rv2852c;logic_name=ena Chromosome ena mRNA 3160580 3162061 . - . ID=transcript:Rv2852c;Parent=gene:Rv2852c;Name=mqo-1;biotype=protein_coding;transcript_id=Rv2852c Chromosome ena exon 3160580 3162061 . - . Parent=transcript:Rv2852c;Name=Rv2852c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2852c-1;rank=1 Chromosome ena CDS 3160580 3162061 . - 0 ID=CDS:Rv2852c;Parent=transcript:Rv2852c;protein_id=Rv2852c ### -Chromosome ena gene 3162268 3164115 . + . ID=gene:Rv2853;Name=PE_PGRS48;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS48;gene_id=Rv2853;logic_name=ena +Chromosome ena gene 3162268 3164115 . + . ID=gene:Rv2853;Name=PE_PGRS48;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS48;gene_id=Rv2853;logic_name=ena Chromosome ena mRNA 3162268 3164115 . + . ID=transcript:Rv2853;Parent=gene:Rv2853;Name=PE_PGRS48-1;biotype=protein_coding;transcript_id=Rv2853 Chromosome ena exon 3162268 3164115 . + . Parent=transcript:Rv2853;Name=Rv2853-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2853-1;rank=1 Chromosome ena CDS 3162268 3164115 . + 0 ID=CDS:Rv2853;Parent=transcript:Rv2853;protein_id=Rv2853 ### -Chromosome ena gene 3164152 3165192 . + . ID=gene:Rv2854;biotype=protein_coding;description=Unknown protein;gene_id=Rv2854;logic_name=ena +Chromosome ena gene 3164152 3165192 . + . ID=gene:Rv2854;biotype=protein_coding;description=Unknown protein;gene_id=Rv2854;logic_name=ena Chromosome ena mRNA 3164152 3165192 . + . ID=transcript:Rv2854;Parent=gene:Rv2854;biotype=protein_coding;transcript_id=Rv2854 Chromosome ena exon 3164152 3165192 . + . Parent=transcript:Rv2854;Name=Rv2854-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2854-1;rank=1 Chromosome ena CDS 3164152 3165192 . + 0 ID=CDS:Rv2854;Parent=transcript:Rv2854;protein_id=Rv2854 ### -Chromosome ena gene 3165205 3166584 . + . ID=gene:Rv2855;Name=mtr;biotype=protein_coding;description=NADPH-dependent mycothiol reductase Mtr;gene_id=Rv2855;logic_name=ena +Chromosome ena gene 3165205 3166584 . + . ID=gene:Rv2855;Name=mtr;biotype=protein_coding;description=NADPH-dependent mycothiol reductase Mtr;gene_id=Rv2855;logic_name=ena Chromosome ena mRNA 3165205 3166584 . + . ID=transcript:Rv2855;Parent=gene:Rv2855;Name=mtr-1;biotype=protein_coding;transcript_id=Rv2855 Chromosome ena exon 3165205 3166584 . + . Parent=transcript:Rv2855;Name=Rv2855-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2855-1;rank=1 Chromosome ena CDS 3165205 3166584 . + 0 ID=CDS:Rv2855;Parent=transcript:Rv2855;protein_id=Rv2855 ### -Chromosome ena gene 3166684 3167802 . + . ID=gene:Rv2856;Name=nicT;biotype=protein_coding;description=Possible nickel-transport integral membrane protein NicT;gene_id=Rv2856;logic_name=ena +Chromosome ena gene 3166684 3167802 . + . ID=gene:Rv2856;Name=nicT;biotype=protein_coding;description=Possible nickel-transport integral membrane protein NicT;gene_id=Rv2856;logic_name=ena Chromosome ena mRNA 3166684 3167802 . + . ID=transcript:Rv2856;Parent=gene:Rv2856;Name=nicT-1;biotype=protein_coding;transcript_id=Rv2856 Chromosome ena exon 3166684 3167802 . + . Parent=transcript:Rv2856;Name=Rv2856-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2856-1;rank=1 Chromosome ena CDS 3166684 3167802 . + 0 ID=CDS:Rv2856;Parent=transcript:Rv2856;protein_id=Rv2856 ### -Chromosome ena gene 3168583 3169359 . - . ID=gene:Rv2857c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2857c;logic_name=ena +Chromosome ena gene 3168583 3169359 . - . ID=gene:Rv2857c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv2857c;logic_name=ena Chromosome ena mRNA 3168583 3169359 . - . ID=transcript:Rv2857c;Parent=gene:Rv2857c;biotype=protein_coding;transcript_id=Rv2857c Chromosome ena exon 3168583 3169359 . - . Parent=transcript:Rv2857c;Name=Rv2857c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2857c-1;rank=1 Chromosome ena CDS 3168583 3169359 . - 0 ID=CDS:Rv2857c;Parent=transcript:Rv2857c;protein_id=Rv2857c ### -Chromosome ena gene 3169356 3170723 . - . ID=gene:Rv2858c;Name=aldC;biotype=protein_coding;description=Probable aldehyde dehydrogenase AldC;gene_id=Rv2858c;logic_name=ena +Chromosome ena gene 3169356 3170723 . - . ID=gene:Rv2858c;Name=aldC;biotype=protein_coding;description=Probable aldehyde dehydrogenase AldC;gene_id=Rv2858c;logic_name=ena Chromosome ena mRNA 3169356 3170723 . - . ID=transcript:Rv2858c;Parent=gene:Rv2858c;Name=aldC-1;biotype=protein_coding;transcript_id=Rv2858c Chromosome ena exon 3169356 3170723 . - . Parent=transcript:Rv2858c;Name=Rv2858c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2858c-1;rank=1 Chromosome ena CDS 3169356 3170723 . - 0 ID=CDS:Rv2858c;Parent=transcript:Rv2858c;protein_id=Rv2858c ### -Chromosome ena gene 3170720 3171646 . - . ID=gene:Rv2859c;biotype=protein_coding;description=Possible amidotransferase;gene_id=Rv2859c;logic_name=ena +Chromosome ena gene 3170720 3171646 . - . ID=gene:Rv2859c;biotype=protein_coding;description=Possible amidotransferase;gene_id=Rv2859c;logic_name=ena Chromosome ena mRNA 3170720 3171646 . - . ID=transcript:Rv2859c;Parent=gene:Rv2859c;biotype=protein_coding;transcript_id=Rv2859c Chromosome ena exon 3170720 3171646 . - . Parent=transcript:Rv2859c;Name=Rv2859c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2859c-1;rank=1 Chromosome ena CDS 3170720 3171646 . - 0 ID=CDS:Rv2859c;Parent=transcript:Rv2859c;protein_id=Rv2859c ### -Chromosome ena gene 3171627 3173000 . - . ID=gene:Rv2860c;Name=glnA4;biotype=protein_coding;description=Probable glutamine synthetase GlnA4 (glutamine synthase) (GS-II);gene_id=Rv2860c;logic_name=ena +Chromosome ena gene 3171627 3173000 . - . ID=gene:Rv2860c;Name=glnA4;biotype=protein_coding;description=Probable glutamine synthetase GlnA4 (glutamine synthase) (GS-II);gene_id=Rv2860c;logic_name=ena Chromosome ena mRNA 3171627 3173000 . - . ID=transcript:Rv2860c;Parent=gene:Rv2860c;Name=glnA4-1;biotype=protein_coding;transcript_id=Rv2860c Chromosome ena exon 3171627 3173000 . - . Parent=transcript:Rv2860c;Name=Rv2860c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2860c-1;rank=1 Chromosome ena CDS 3171627 3173000 . - 0 ID=CDS:Rv2860c;Parent=transcript:Rv2860c;protein_id=Rv2860c ### -Chromosome ena gene 3173160 3174017 . - . ID=gene:Rv2861c;Name=mapB;biotype=protein_coding;description=Methionine aminopeptidase MapB (map) (peptidase M);gene_id=Rv2861c;logic_name=ena +Chromosome ena gene 3173160 3174017 . - . ID=gene:Rv2861c;Name=mapB;biotype=protein_coding;description=Methionine aminopeptidase MapB (map) (peptidase M);gene_id=Rv2861c;logic_name=ena Chromosome ena mRNA 3173160 3174017 . - . ID=transcript:Rv2861c;Parent=gene:Rv2861c;Name=mapB-1;biotype=protein_coding;transcript_id=Rv2861c Chromosome ena exon 3173160 3174017 . - . Parent=transcript:Rv2861c;Name=Rv2861c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2861c-1;rank=1 Chromosome ena CDS 3173160 3174017 . - 0 ID=CDS:Rv2861c;Parent=transcript:Rv2861c;protein_id=Rv2861c ### -Chromosome ena gene 3174059 3174643 . - . ID=gene:Rv2862c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2862c;logic_name=ena +Chromosome ena gene 3174059 3174643 . - . ID=gene:Rv2862c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2862c;logic_name=ena Chromosome ena mRNA 3174059 3174643 . - . ID=transcript:Rv2862c;Parent=gene:Rv2862c;biotype=protein_coding;transcript_id=Rv2862c Chromosome ena exon 3174059 3174643 . - . Parent=transcript:Rv2862c;Name=Rv2862c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2862c-1;rank=1 Chromosome ena CDS 3174059 3174643 . - 0 ID=CDS:Rv2862c;Parent=transcript:Rv2862c;protein_id=Rv2862c ### -Chromosome ena gene 3174747 3174995 . + . ID=gene:Rv2862A;Name=vapB23;biotype=protein_coding;description=Possible antitoxin VapB23;gene_id=Rv2862A;logic_name=ena +Chromosome ena gene 3174747 3174995 . + . ID=gene:Rv2862A;Name=vapB23;biotype=protein_coding;description=Possible antitoxin VapB23;gene_id=Rv2862A;logic_name=ena Chromosome ena mRNA 3174747 3174995 . + . ID=transcript:Rv2862A;Parent=gene:Rv2862A;Name=vapB23-1;biotype=protein_coding;transcript_id=Rv2862A Chromosome ena exon 3174747 3174995 . + . Parent=transcript:Rv2862A;Name=Rv2862A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2862A-1;rank=1 Chromosome ena CDS 3174747 3174995 . + 0 ID=CDS:Rv2862A;Parent=transcript:Rv2862A;protein_id=Rv2862A ### -Chromosome ena gene 3174992 3175372 . + . ID=gene:Rv2863;Name=vapC23;biotype=protein_coding;description=Possible toxin VapC23;gene_id=Rv2863;logic_name=ena +Chromosome ena gene 3174992 3175372 . + . ID=gene:Rv2863;Name=vapC23;biotype=protein_coding;description=Possible toxin VapC23;gene_id=Rv2863;logic_name=ena Chromosome ena mRNA 3174992 3175372 . + . ID=transcript:Rv2863;Parent=gene:Rv2863;Name=vapC23-1;biotype=protein_coding;transcript_id=Rv2863 Chromosome ena exon 3174992 3175372 . + . Parent=transcript:Rv2863;Name=Rv2863-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2863-1;rank=1 Chromosome ena CDS 3174992 3175372 . + 0 ID=CDS:Rv2863;Parent=transcript:Rv2863;protein_id=Rv2863 ### -Chromosome ena gene 3175454 3177265 . - . ID=gene:Rv2864c;biotype=protein_coding;description=Possible penicillin-binding lipoprotein;gene_id=Rv2864c;logic_name=ena +Chromosome ena gene 3175454 3177265 . - . ID=gene:Rv2864c;biotype=protein_coding;description=Possible penicillin-binding lipoprotein;gene_id=Rv2864c;logic_name=ena Chromosome ena mRNA 3175454 3177265 . - . ID=transcript:Rv2864c;Parent=gene:Rv2864c;biotype=protein_coding;transcript_id=Rv2864c Chromosome ena exon 3175454 3177265 . - . Parent=transcript:Rv2864c;Name=Rv2864c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2864c-1;rank=1 Chromosome ena CDS 3175454 3177265 . - 0 ID=CDS:Rv2864c;Parent=transcript:Rv2864c;protein_id=Rv2864c ### -Chromosome ena gene 3177537 3177818 . + . ID=gene:Rv2865;Name=relF;biotype=protein_coding;description=Antitoxin RelF;gene_id=Rv2865;logic_name=ena +Chromosome ena gene 3177537 3177818 . + . ID=gene:Rv2865;Name=relF;biotype=protein_coding;description=Antitoxin RelF;gene_id=Rv2865;logic_name=ena Chromosome ena mRNA 3177537 3177818 . + . ID=transcript:Rv2865;Parent=gene:Rv2865;Name=relF-1;biotype=protein_coding;transcript_id=Rv2865 Chromosome ena exon 3177537 3177818 . + . Parent=transcript:Rv2865;Name=Rv2865-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2865-1;rank=1 Chromosome ena CDS 3177537 3177818 . + 0 ID=CDS:Rv2865;Parent=transcript:Rv2865;protein_id=Rv2865 ### -Chromosome ena gene 3177822 3178085 . + . ID=gene:Rv2866;Name=relG;biotype=protein_coding;description=Toxin RelG;gene_id=Rv2866;logic_name=ena +Chromosome ena gene 3177822 3178085 . + . ID=gene:Rv2866;Name=relG;biotype=protein_coding;description=Toxin RelG;gene_id=Rv2866;logic_name=ena Chromosome ena mRNA 3177822 3178085 . + . ID=transcript:Rv2866;Parent=gene:Rv2866;Name=relG-1;biotype=protein_coding;transcript_id=Rv2866 Chromosome ena exon 3177822 3178085 . + . Parent=transcript:Rv2866;Name=Rv2866-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2866-1;rank=1 Chromosome ena CDS 3177822 3178085 . + 0 ID=CDS:Rv2866;Parent=transcript:Rv2866;protein_id=Rv2866 ### -Chromosome ena gene 3178458 3179312 . - . ID=gene:Rv2867c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2867c;logic_name=ena +Chromosome ena gene 3178458 3179312 . - . ID=gene:Rv2867c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv2867c;logic_name=ena Chromosome ena mRNA 3178458 3179312 . - . ID=transcript:Rv2867c;Parent=gene:Rv2867c;biotype=protein_coding;transcript_id=Rv2867c Chromosome ena exon 3178458 3179312 . - . Parent=transcript:Rv2867c;Name=Rv2867c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2867c-1;rank=1 Chromosome ena CDS 3178458 3179312 . - 0 ID=CDS:Rv2867c;Parent=transcript:Rv2867c;protein_id=Rv2867c ### -Chromosome ena gene 3179368 3180531 . - . ID=gene:Rv2868c;Name=gcpE;biotype=protein_coding;description=Probable GcpE protein;gene_id=Rv2868c;logic_name=ena +Chromosome ena gene 3179368 3180531 . - . ID=gene:Rv2868c;Name=gcpE;biotype=protein_coding;description=Probable GcpE protein;gene_id=Rv2868c;logic_name=ena Chromosome ena mRNA 3179368 3180531 . - . ID=transcript:Rv2868c;Parent=gene:Rv2868c;Name=gcpE-1;biotype=protein_coding;transcript_id=Rv2868c Chromosome ena exon 3179368 3180531 . - . Parent=transcript:Rv2868c;Name=Rv2868c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2868c-1;rank=1 Chromosome ena CDS 3179368 3180531 . - 0 ID=CDS:Rv2868c;Parent=transcript:Rv2868c;protein_id=Rv2868c ### -Chromosome ena gene 3180548 3181762 . - . ID=gene:Rv2869c;Name=rip;biotype=protein_coding;description=Membrane bound metalloprotease;gene_id=Rv2869c;logic_name=ena +Chromosome ena gene 3180548 3181762 . - . ID=gene:Rv2869c;Name=rip;biotype=protein_coding;description=Membrane bound metalloprotease;gene_id=Rv2869c;logic_name=ena Chromosome ena mRNA 3180548 3181762 . - . ID=transcript:Rv2869c;Parent=gene:Rv2869c;Name=rip-1;biotype=protein_coding;transcript_id=Rv2869c Chromosome ena exon 3180548 3181762 . - . Parent=transcript:Rv2869c;Name=Rv2869c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2869c-1;rank=1 Chromosome ena CDS 3180548 3181762 . - 0 ID=CDS:Rv2869c;Parent=transcript:Rv2869c;protein_id=Rv2869c ### -Chromosome ena gene 3181770 3183011 . - . ID=gene:Rv2870c;Name=dxr;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase);gene_id=Rv2870c;logic_name=ena +Chromosome ena gene 3181770 3183011 . - . ID=gene:Rv2870c;Name=dxr;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase);gene_id=Rv2870c;logic_name=ena Chromosome ena mRNA 3181770 3183011 . - . ID=transcript:Rv2870c;Parent=gene:Rv2870c;Name=dxr-1;biotype=protein_coding;transcript_id=Rv2870c Chromosome ena exon 3181770 3183011 . - . Parent=transcript:Rv2870c;Name=Rv2870c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2870c-1;rank=1 Chromosome ena CDS 3181770 3183011 . - 0 ID=CDS:Rv2870c;Parent=transcript:Rv2870c;protein_id=Rv2870c ### -Chromosome ena gene 3183138 3183395 . + . ID=gene:Rv2871;Name=vapB43;biotype=protein_coding;description=Possible antitoxin VapB43;gene_id=Rv2871;logic_name=ena +Chromosome ena gene 3183138 3183395 . + . ID=gene:Rv2871;Name=vapB43;biotype=protein_coding;description=Possible antitoxin VapB43;gene_id=Rv2871;logic_name=ena Chromosome ena mRNA 3183138 3183395 . + . ID=transcript:Rv2871;Parent=gene:Rv2871;Name=vapB43-1;biotype=protein_coding;transcript_id=Rv2871 Chromosome ena exon 3183138 3183395 . + . Parent=transcript:Rv2871;Name=Rv2871-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2871-1;rank=1 Chromosome ena CDS 3183138 3183395 . + 0 ID=CDS:Rv2871;Parent=transcript:Rv2871;protein_id=Rv2871 ### -Chromosome ena gene 3183382 3183825 . + . ID=gene:Rv2872;Name=vapC43;biotype=protein_coding;description=Possible toxin VapC43. Contains PIN domain.;gene_id=Rv2872;logic_name=ena +Chromosome ena gene 3183382 3183825 . + . ID=gene:Rv2872;Name=vapC43;biotype=protein_coding;description=Possible toxin VapC43. Contains PIN domain.;gene_id=Rv2872;logic_name=ena Chromosome ena mRNA 3183382 3183825 . + . ID=transcript:Rv2872;Parent=gene:Rv2872;Name=vapC43-1;biotype=protein_coding;transcript_id=Rv2872 Chromosome ena exon 3183382 3183825 . + . Parent=transcript:Rv2872;Name=Rv2872-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2872-1;rank=1 Chromosome ena CDS 3183382 3183825 . + 0 ID=CDS:Rv2872;Parent=transcript:Rv2872;protein_id=Rv2872 ### -Chromosome ena gene 3183905 3184567 . + . ID=gene:Rv2873;Name=mpt83;biotype=protein_coding;description=Cell surface lipoprotein Mpt83 (lipoprotein P23);gene_id=Rv2873;logic_name=ena +Chromosome ena gene 3183905 3184567 . + . ID=gene:Rv2873;Name=mpt83;biotype=protein_coding;description=Cell surface lipoprotein Mpt83 (lipoprotein P23);gene_id=Rv2873;logic_name=ena Chromosome ena mRNA 3183905 3184567 . + . ID=transcript:Rv2873;Parent=gene:Rv2873;Name=mpt83-1;biotype=protein_coding;transcript_id=Rv2873 Chromosome ena exon 3183905 3184567 . + . Parent=transcript:Rv2873;Name=Rv2873-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2873-1;rank=1 Chromosome ena CDS 3183905 3184567 . + 0 ID=CDS:Rv2873;Parent=transcript:Rv2873;protein_id=Rv2873 ### -Chromosome ena gene 3184847 3186934 . + . ID=gene:Rv2874;Name=dipZ;biotype=protein_coding;description=Possible integral membrane C-type cytochrome biogenesis protein DipZ;gene_id=Rv2874;logic_name=ena +Chromosome ena gene 3184847 3186934 . + . ID=gene:Rv2874;Name=dipZ;biotype=protein_coding;description=Possible integral membrane C-type cytochrome biogenesis protein DipZ;gene_id=Rv2874;logic_name=ena Chromosome ena mRNA 3184847 3186934 . + . ID=transcript:Rv2874;Parent=gene:Rv2874;Name=dipZ-1;biotype=protein_coding;transcript_id=Rv2874 Chromosome ena exon 3184847 3186934 . + . Parent=transcript:Rv2874;Name=Rv2874-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2874-1;rank=1 Chromosome ena CDS 3184847 3186934 . + 0 ID=CDS:Rv2874;Parent=transcript:Rv2874;protein_id=Rv2874 ### -Chromosome ena gene 3187030 3187611 . + . ID=gene:Rv2875;Name=mpt70;biotype=protein_coding;description=Major secreted immunogenic protein Mpt70;gene_id=Rv2875;logic_name=ena +Chromosome ena gene 3187030 3187611 . + . ID=gene:Rv2875;Name=mpt70;biotype=protein_coding;description=Major secreted immunogenic protein Mpt70;gene_id=Rv2875;logic_name=ena Chromosome ena mRNA 3187030 3187611 . + . ID=transcript:Rv2875;Parent=gene:Rv2875;Name=mpt70-1;biotype=protein_coding;transcript_id=Rv2875 Chromosome ena exon 3187030 3187611 . + . Parent=transcript:Rv2875;Name=Rv2875-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2875-1;rank=1 Chromosome ena CDS 3187030 3187611 . + 0 ID=CDS:Rv2875;Parent=transcript:Rv2875;protein_id=Rv2875 ### -Chromosome ena gene 3187663 3187977 . + . ID=gene:Rv2876;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2876;logic_name=ena +Chromosome ena gene 3187663 3187977 . + . ID=gene:Rv2876;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv2876;logic_name=ena Chromosome ena mRNA 3187663 3187977 . + . ID=transcript:Rv2876;Parent=gene:Rv2876;biotype=protein_coding;transcript_id=Rv2876 Chromosome ena exon 3187663 3187977 . + . Parent=transcript:Rv2876;Name=Rv2876-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2876-1;rank=1 Chromosome ena CDS 3187663 3187977 . + 0 ID=CDS:Rv2876;Parent=transcript:Rv2876;protein_id=Rv2876 ### -Chromosome ena gene 3188008 3188871 . - . ID=gene:Rv2877c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2877c;logic_name=ena +Chromosome ena gene 3188008 3188871 . - . ID=gene:Rv2877c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2877c;logic_name=ena Chromosome ena mRNA 3188008 3188871 . - . ID=transcript:Rv2877c;Parent=gene:Rv2877c;biotype=protein_coding;transcript_id=Rv2877c Chromosome ena exon 3188008 3188871 . - . Parent=transcript:Rv2877c;Name=Rv2877c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2877c-1;rank=1 Chromosome ena CDS 3188008 3188871 . - 0 ID=CDS:Rv2877c;Parent=transcript:Rv2877c;protein_id=Rv2877c ### -Chromosome ena gene 3188876 3189397 . - . ID=gene:Rv2878c;Name=mpt53;biotype=protein_coding;description=Soluble secreted antigen Mpt53 precursor;gene_id=Rv2878c;logic_name=ena +Chromosome ena gene 3188876 3189397 . - . ID=gene:Rv2878c;Name=mpt53;biotype=protein_coding;description=Soluble secreted antigen Mpt53 precursor;gene_id=Rv2878c;logic_name=ena Chromosome ena mRNA 3188876 3189397 . - . ID=transcript:Rv2878c;Parent=gene:Rv2878c;Name=mpt53-1;biotype=protein_coding;transcript_id=Rv2878c Chromosome ena exon 3188876 3189397 . - . Parent=transcript:Rv2878c;Name=Rv2878c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2878c-1;rank=1 Chromosome ena CDS 3188876 3189397 . - 0 ID=CDS:Rv2878c;Parent=transcript:Rv2878c;protein_id=Rv2878c ### -Chromosome ena gene 3189583 3190152 . - . ID=gene:Rv2879c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2879c;logic_name=ena +Chromosome ena gene 3189583 3190152 . - . ID=gene:Rv2879c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2879c;logic_name=ena Chromosome ena mRNA 3189583 3190152 . - . ID=transcript:Rv2879c;Parent=gene:Rv2879c;biotype=protein_coding;transcript_id=Rv2879c Chromosome ena exon 3189583 3190152 . - . Parent=transcript:Rv2879c;Name=Rv2879c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2879c-1;rank=1 Chromosome ena CDS 3189583 3190152 . - 0 ID=CDS:Rv2879c;Parent=transcript:Rv2879c;protein_id=Rv2879c ### -Chromosome ena gene 3189851 3190678 . - . ID=gene:Rv2880c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2880c;logic_name=ena +Chromosome ena gene 3189851 3190678 . - . ID=gene:Rv2880c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2880c;logic_name=ena Chromosome ena mRNA 3189851 3190678 . - . ID=transcript:Rv2880c;Parent=gene:Rv2880c;biotype=protein_coding;transcript_id=Rv2880c Chromosome ena exon 3189851 3190678 . - . Parent=transcript:Rv2880c;Name=Rv2880c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2880c-1;rank=1 Chromosome ena CDS 3189851 3190678 . - 0 ID=CDS:Rv2880c;Parent=transcript:Rv2880c;protein_id=Rv2880c ### -Chromosome ena gene 3190701 3191621 . - . ID=gene:Rv2881c;Name=cdsA;biotype=protein_coding;description=Probable integral membrane phosphatidate cytidylyltransferase CdsA (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase);gene_id=Rv2881c;logic_name=ena +Chromosome ena gene 3190701 3191621 . - . ID=gene:Rv2881c;Name=cdsA;biotype=protein_coding;description=Probable integral membrane phosphatidate cytidylyltransferase CdsA (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase);gene_id=Rv2881c;logic_name=ena Chromosome ena mRNA 3190701 3191621 . - . ID=transcript:Rv2881c;Parent=gene:Rv2881c;Name=cdsA-1;biotype=protein_coding;transcript_id=Rv2881c Chromosome ena exon 3190701 3191621 . - . Parent=transcript:Rv2881c;Name=Rv2881c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2881c-1;rank=1 Chromosome ena CDS 3190701 3191621 . - 0 ID=CDS:Rv2881c;Parent=transcript:Rv2881c;protein_id=Rv2881c ### -Chromosome ena gene 3191644 3192201 . - . ID=gene:Rv2882c;Name=frr;biotype=protein_coding;description=Ribosome recycling factor Frr (ribosome releasing factor) (RRF);gene_id=Rv2882c;logic_name=ena +Chromosome ena gene 3191644 3192201 . - . ID=gene:Rv2882c;Name=frr;biotype=protein_coding;description=Ribosome recycling factor Frr (ribosome releasing factor) (RRF);gene_id=Rv2882c;logic_name=ena Chromosome ena mRNA 3191644 3192201 . - . ID=transcript:Rv2882c;Parent=gene:Rv2882c;Name=frr-1;biotype=protein_coding;transcript_id=Rv2882c Chromosome ena exon 3191644 3192201 . - . Parent=transcript:Rv2882c;Name=Rv2882c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2882c-1;rank=1 Chromosome ena CDS 3191644 3192201 . - 0 ID=CDS:Rv2882c;Parent=transcript:Rv2882c;protein_id=Rv2882c ### -Chromosome ena gene 3192373 3193158 . - . ID=gene:Rv2883c;Name=pyrH;biotype=protein_coding;description=Probable uridylate kinase PyrH (UK) (uridine monophosphate kinase) (UMP kinase);gene_id=Rv2883c;logic_name=ena +Chromosome ena gene 3192373 3193158 . - . ID=gene:Rv2883c;Name=pyrH;biotype=protein_coding;description=Probable uridylate kinase PyrH (UK) (uridine monophosphate kinase) (UMP kinase);gene_id=Rv2883c;logic_name=ena Chromosome ena mRNA 3192373 3193158 . - . ID=transcript:Rv2883c;Parent=gene:Rv2883c;Name=pyrH-1;biotype=protein_coding;transcript_id=Rv2883c Chromosome ena exon 3192373 3193158 . - . Parent=transcript:Rv2883c;Name=Rv2883c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2883c-1;rank=1 Chromosome ena CDS 3192373 3193158 . - 0 ID=CDS:Rv2883c;Parent=transcript:Rv2883c;protein_id=Rv2883c ### -Chromosome ena gene 3193393 3194151 . + . ID=gene:Rv2884;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2884;logic_name=ena +Chromosome ena gene 3193393 3194151 . + . ID=gene:Rv2884;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2884;logic_name=ena Chromosome ena mRNA 3193393 3194151 . + . ID=transcript:Rv2884;Parent=gene:Rv2884;biotype=protein_coding;transcript_id=Rv2884 Chromosome ena exon 3193393 3194151 . + . Parent=transcript:Rv2884;Name=Rv2884-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2884-1;rank=1 Chromosome ena CDS 3193393 3194151 . + 0 ID=CDS:Rv2884;Parent=transcript:Rv2884;protein_id=Rv2884 ### -Chromosome ena gene 3194166 3195548 . - . ID=gene:Rv2885c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2885c;logic_name=ena +Chromosome ena gene 3194166 3195548 . - . ID=gene:Rv2885c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2885c;logic_name=ena Chromosome ena mRNA 3194166 3195548 . - . ID=transcript:Rv2885c;Parent=gene:Rv2885c;biotype=protein_coding;transcript_id=Rv2885c Chromosome ena exon 3194166 3195548 . - . Parent=transcript:Rv2885c;Name=Rv2885c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2885c-1;rank=1 Chromosome ena CDS 3194166 3195548 . - 0 ID=CDS:Rv2885c;Parent=transcript:Rv2885c;protein_id=Rv2885c ### -Chromosome ena_mobile_element biological_region 3194166 3196432 . - . external_name=IS1539%2C len: 2267 nt. Insertion sequence IS1539.;logic_name=ena_mobile_element -Chromosome ena gene 3195545 3196432 . - . ID=gene:Rv2886c;biotype=protein_coding;description=Probable resolvase;gene_id=Rv2886c;logic_name=ena +Chromosome ena_mobile_element biological_region 3194166 3196432 . - . external_name=IS1539%2C len: 2267 nt. Insertion sequence IS1539.;logic_name=ena_mobile_element +Chromosome ena gene 3195545 3196432 . - . ID=gene:Rv2886c;biotype=protein_coding;description=Probable resolvase;gene_id=Rv2886c;logic_name=ena Chromosome ena mRNA 3195545 3196432 . - . ID=transcript:Rv2886c;Parent=gene:Rv2886c;biotype=protein_coding;transcript_id=Rv2886c Chromosome ena exon 3195545 3196432 . - . Parent=transcript:Rv2886c;Name=Rv2886c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2886c-1;rank=1 Chromosome ena CDS 3195545 3196432 . - 0 ID=CDS:Rv2886c;Parent=transcript:Rv2886c;protein_id=Rv2886c ### -Chromosome ena gene 3196431 3196850 . + . ID=gene:Rv2887;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2887;logic_name=ena +Chromosome ena gene 3196431 3196850 . + . ID=gene:Rv2887;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2887;logic_name=ena Chromosome ena mRNA 3196431 3196850 . + . ID=transcript:Rv2887;Parent=gene:Rv2887;biotype=protein_coding;transcript_id=Rv2887 Chromosome ena exon 3196431 3196850 . + . Parent=transcript:Rv2887;Name=Rv2887-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2887-1;rank=1 Chromosome ena CDS 3196431 3196850 . + 0 ID=CDS:Rv2887;Parent=transcript:Rv2887;protein_id=Rv2887 ### -Chromosome ena gene 3196864 3198285 . - . ID=gene:Rv2888c;Name=amiC;biotype=protein_coding;description=Probable amidase AmiC (aminohydrolase);gene_id=Rv2888c;logic_name=ena +Chromosome ena gene 3196864 3198285 . - . ID=gene:Rv2888c;Name=amiC;biotype=protein_coding;description=Probable amidase AmiC (aminohydrolase);gene_id=Rv2888c;logic_name=ena Chromosome ena mRNA 3196864 3198285 . - . ID=transcript:Rv2888c;Parent=gene:Rv2888c;Name=amiC-1;biotype=protein_coding;transcript_id=Rv2888c Chromosome ena exon 3196864 3198285 . - . Parent=transcript:Rv2888c;Name=Rv2888c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2888c-1;rank=1 Chromosome ena CDS 3196864 3198285 . - 0 ID=CDS:Rv2888c;Parent=transcript:Rv2888c;protein_id=Rv2888c ### -Chromosome ena gene 3198292 3199107 . - . ID=gene:Rv2889c;Name=tsf;biotype=protein_coding;description=Probable elongation factor Tsf (EF-ts);gene_id=Rv2889c;logic_name=ena +Chromosome ena gene 3198292 3199107 . - . ID=gene:Rv2889c;Name=tsf;biotype=protein_coding;description=Probable elongation factor Tsf (EF-ts);gene_id=Rv2889c;logic_name=ena Chromosome ena mRNA 3198292 3199107 . - . ID=transcript:Rv2889c;Parent=gene:Rv2889c;Name=tsf-1;biotype=protein_coding;transcript_id=Rv2889c Chromosome ena exon 3198292 3199107 . - . Parent=transcript:Rv2889c;Name=Rv2889c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2889c-1;rank=1 Chromosome ena CDS 3198292 3199107 . - 0 ID=CDS:Rv2889c;Parent=transcript:Rv2889c;protein_id=Rv2889c ### -Chromosome ena gene 3199119 3199982 . - . ID=gene:Rv2890c;Name=rpsB;biotype=protein_coding;description=30S ribosomal protein S2 RpsB;gene_id=Rv2890c;logic_name=ena +Chromosome ena gene 3199119 3199982 . - . ID=gene:Rv2890c;Name=rpsB;biotype=protein_coding;description=30S ribosomal protein S2 RpsB;gene_id=Rv2890c;logic_name=ena Chromosome ena mRNA 3199119 3199982 . - . ID=transcript:Rv2890c;Parent=gene:Rv2890c;Name=rpsB-1;biotype=protein_coding;transcript_id=Rv2890c Chromosome ena exon 3199119 3199982 . - . Parent=transcript:Rv2890c;Name=Rv2890c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2890c-1;rank=1 Chromosome ena CDS 3199119 3199982 . - 0 ID=CDS:Rv2890c;Parent=transcript:Rv2890c;protein_id=Rv2890c ### -Chromosome ena gene 3200266 3201015 . + . ID=gene:Rv2891;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2891;logic_name=ena +Chromosome ena gene 3200266 3201015 . + . ID=gene:Rv2891;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2891;logic_name=ena Chromosome ena mRNA 3200266 3201015 . + . ID=transcript:Rv2891;Parent=gene:Rv2891;biotype=protein_coding;transcript_id=Rv2891 Chromosome ena exon 3200266 3201015 . + . Parent=transcript:Rv2891;Name=Rv2891-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2891-1;rank=1 Chromosome ena CDS 3200266 3201015 . + 0 ID=CDS:Rv2891;Parent=transcript:Rv2891;protein_id=Rv2891 ### -Chromosome ena gene 3200794 3202020 . - . ID=gene:Rv2892c;Name=PPE45;biotype=protein_coding;description=PPE family protein PPE45;gene_id=Rv2892c;logic_name=ena +Chromosome ena gene 3200794 3202020 . - . ID=gene:Rv2892c;Name=PPE45;biotype=protein_coding;description=PPE family protein PPE45;gene_id=Rv2892c;logic_name=ena Chromosome ena mRNA 3200794 3202020 . - . ID=transcript:Rv2892c;Parent=gene:Rv2892c;Name=PPE45-1;biotype=protein_coding;transcript_id=Rv2892c Chromosome ena exon 3200794 3202020 . - . Parent=transcript:Rv2892c;Name=Rv2892c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2892c-1;rank=1 Chromosome ena CDS 3200794 3202020 . - 0 ID=CDS:Rv2892c;Parent=transcript:Rv2892c;protein_id=Rv2892c ### -Chromosome ena gene 3202420 3203397 . + . ID=gene:Rv2893;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2893;logic_name=ena +Chromosome ena gene 3202420 3203397 . + . ID=gene:Rv2893;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2893;logic_name=ena Chromosome ena mRNA 3202420 3203397 . + . ID=transcript:Rv2893;Parent=gene:Rv2893;biotype=protein_coding;transcript_id=Rv2893 Chromosome ena exon 3202420 3203397 . + . Parent=transcript:Rv2893;Name=Rv2893-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2893-1;rank=1 Chromosome ena CDS 3202420 3203397 . + 0 ID=CDS:Rv2893;Parent=transcript:Rv2893;protein_id=Rv2893 ### -Chromosome ena gene 3203394 3204290 . - . ID=gene:Rv2894c;Name=xerC;biotype=protein_coding;description=Probable integrase/recombinase XerC;gene_id=Rv2894c;logic_name=ena +Chromosome ena gene 3203394 3204290 . - . ID=gene:Rv2894c;Name=xerC;biotype=protein_coding;description=Probable integrase/recombinase XerC;gene_id=Rv2894c;logic_name=ena Chromosome ena mRNA 3203394 3204290 . - . ID=transcript:Rv2894c;Parent=gene:Rv2894c;Name=xerC-1;biotype=protein_coding;transcript_id=Rv2894c Chromosome ena exon 3203394 3204290 . - . Parent=transcript:Rv2894c;Name=Rv2894c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2894c-1;rank=1 Chromosome ena CDS 3203394 3204290 . - 0 ID=CDS:Rv2894c;Parent=transcript:Rv2894c;protein_id=Rv2894c ### -Chromosome ena gene 3204381 3205232 . - . ID=gene:Rv2895c;Name=viuB;biotype=protein_coding;description=Possible mycobactin utilization protein ViuB;gene_id=Rv2895c;logic_name=ena +Chromosome ena gene 3204381 3205232 . - . ID=gene:Rv2895c;Name=viuB;biotype=protein_coding;description=Possible mycobactin utilization protein ViuB;gene_id=Rv2895c;logic_name=ena Chromosome ena mRNA 3204381 3205232 . - . ID=transcript:Rv2895c;Parent=gene:Rv2895c;Name=viuB-1;biotype=protein_coding;transcript_id=Rv2895c Chromosome ena exon 3204381 3205232 . - . Parent=transcript:Rv2895c;Name=Rv2895c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2895c-1;rank=1 Chromosome ena CDS 3204381 3205232 . - 0 ID=CDS:Rv2895c;Parent=transcript:Rv2895c;protein_id=Rv2895c ### -Chromosome ena gene 3205265 3206434 . - . ID=gene:Rv2896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2896c;logic_name=ena +Chromosome ena gene 3205265 3206434 . - . ID=gene:Rv2896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2896c;logic_name=ena Chromosome ena mRNA 3205265 3206434 . - . ID=transcript:Rv2896c;Parent=gene:Rv2896c;biotype=protein_coding;transcript_id=Rv2896c Chromosome ena exon 3205265 3206434 . - . Parent=transcript:Rv2896c;Name=Rv2896c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2896c-1;rank=1 Chromosome ena CDS 3205265 3206434 . - 0 ID=CDS:Rv2896c;Parent=transcript:Rv2896c;protein_id=Rv2896c ### -Chromosome ena gene 3206431 3207942 . - . ID=gene:Rv2897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2897c;logic_name=ena +Chromosome ena gene 3206431 3207942 . - . ID=gene:Rv2897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2897c;logic_name=ena Chromosome ena mRNA 3206431 3207942 . - . ID=transcript:Rv2897c;Parent=gene:Rv2897c;biotype=protein_coding;transcript_id=Rv2897c Chromosome ena exon 3206431 3207942 . - . Parent=transcript:Rv2897c;Name=Rv2897c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2897c-1;rank=1 Chromosome ena CDS 3206431 3207942 . - 0 ID=CDS:Rv2897c;Parent=transcript:Rv2897c;protein_id=Rv2897c ### -Chromosome ena gene 3207942 3208328 . - . ID=gene:Rv2898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2898c;logic_name=ena +Chromosome ena gene 3207942 3208328 . - . ID=gene:Rv2898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2898c;logic_name=ena Chromosome ena mRNA 3207942 3208328 . - . ID=transcript:Rv2898c;Parent=gene:Rv2898c;biotype=protein_coding;transcript_id=Rv2898c Chromosome ena exon 3207942 3208328 . - . Parent=transcript:Rv2898c;Name=Rv2898c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2898c-1;rank=1 Chromosome ena CDS 3207942 3208328 . - 0 ID=CDS:Rv2898c;Parent=transcript:Rv2898c;protein_id=Rv2898c ### -Chromosome ena gene 3208576 3209406 . - . ID=gene:Rv2899c;Name=fdhD;biotype=protein_coding;description=Possible FdhD protein homolog;gene_id=Rv2899c;logic_name=ena +Chromosome ena gene 3208576 3209406 . - . ID=gene:Rv2899c;Name=fdhD;biotype=protein_coding;description=Possible FdhD protein homolog;gene_id=Rv2899c;logic_name=ena Chromosome ena mRNA 3208576 3209406 . - . ID=transcript:Rv2899c;Parent=gene:Rv2899c;Name=fdhD-1;biotype=protein_coding;transcript_id=Rv2899c Chromosome ena exon 3208576 3209406 . - . Parent=transcript:Rv2899c;Name=Rv2899c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2899c-1;rank=1 Chromosome ena CDS 3208576 3209406 . - 0 ID=CDS:Rv2899c;Parent=transcript:Rv2899c;protein_id=Rv2899c ### -Chromosome ena gene 3209406 3211745 . - . ID=gene:Rv2900c;Name=fdhF;biotype=protein_coding;description=Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked%2C selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H);gene_id=Rv2900c;logic_name=ena +Chromosome ena gene 3209406 3211745 . - . ID=gene:Rv2900c;Name=fdhF;biotype=protein_coding;description=Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked%2C selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H);gene_id=Rv2900c;logic_name=ena Chromosome ena mRNA 3209406 3211745 . - . ID=transcript:Rv2900c;Parent=gene:Rv2900c;Name=fdhF-1;biotype=protein_coding;transcript_id=Rv2900c Chromosome ena exon 3209406 3211745 . - . Parent=transcript:Rv2900c;Name=Rv2900c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2900c-1;rank=1 Chromosome ena CDS 3209406 3211745 . - 0 ID=CDS:Rv2900c;Parent=transcript:Rv2900c;protein_id=Rv2900c ### -Chromosome ena gene 3211803 3212108 . - . ID=gene:Rv2901c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2901c;logic_name=ena +Chromosome ena gene 3211803 3212108 . - . ID=gene:Rv2901c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2901c;logic_name=ena Chromosome ena mRNA 3211803 3212108 . - . ID=transcript:Rv2901c;Parent=gene:Rv2901c;biotype=protein_coding;transcript_id=Rv2901c Chromosome ena exon 3211803 3212108 . - . Parent=transcript:Rv2901c;Name=Rv2901c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2901c-1;rank=1 Chromosome ena CDS 3211803 3212108 . - 0 ID=CDS:Rv2901c;Parent=transcript:Rv2901c;protein_id=Rv2901c ### -Chromosome ena gene 3212162 3212956 . - . ID=gene:Rv2902c;Name=rnhB;biotype=protein_coding;description=Probable ribonuclease HII protein RnhB (RNase HII);gene_id=Rv2902c;logic_name=ena +Chromosome ena gene 3212162 3212956 . - . ID=gene:Rv2902c;Name=rnhB;biotype=protein_coding;description=Probable ribonuclease HII protein RnhB (RNase HII);gene_id=Rv2902c;logic_name=ena Chromosome ena mRNA 3212162 3212956 . - . ID=transcript:Rv2902c;Parent=gene:Rv2902c;Name=rnhB-1;biotype=protein_coding;transcript_id=Rv2902c Chromosome ena exon 3212162 3212956 . - . Parent=transcript:Rv2902c;Name=Rv2902c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2902c-1;rank=1 Chromosome ena CDS 3212162 3212956 . - 0 ID=CDS:Rv2902c;Parent=transcript:Rv2902c;protein_id=Rv2902c ### -Chromosome ena gene 3212970 3213854 . - . ID=gene:Rv2903c;Name=lepB;biotype=protein_coding;description=Probable signal peptidase I LepB (SPASE I) (leader peptidase I).;gene_id=Rv2903c;logic_name=ena +Chromosome ena gene 3212970 3213854 . - . ID=gene:Rv2903c;Name=lepB;biotype=protein_coding;description=Probable signal peptidase I LepB (SPASE I) (leader peptidase I).;gene_id=Rv2903c;logic_name=ena Chromosome ena mRNA 3212970 3213854 . - . ID=transcript:Rv2903c;Parent=gene:Rv2903c;Name=lepB-1;biotype=protein_coding;transcript_id=Rv2903c Chromosome ena exon 3212970 3213854 . - . Parent=transcript:Rv2903c;Name=Rv2903c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2903c-1;rank=1 Chromosome ena CDS 3212970 3213854 . - 0 ID=CDS:Rv2903c;Parent=transcript:Rv2903c;protein_id=Rv2903c ### -Chromosome ena gene 3213912 3214253 . - . ID=gene:Rv2904c;Name=rplS;biotype=protein_coding;description=50S ribosomal protein L19 RplS;gene_id=Rv2904c;logic_name=ena +Chromosome ena gene 3213912 3214253 . - . ID=gene:Rv2904c;Name=rplS;biotype=protein_coding;description=50S ribosomal protein L19 RplS;gene_id=Rv2904c;logic_name=ena Chromosome ena mRNA 3213912 3214253 . - . ID=transcript:Rv2904c;Parent=gene:Rv2904c;Name=rplS-1;biotype=protein_coding;transcript_id=Rv2904c Chromosome ena exon 3213912 3214253 . - . Parent=transcript:Rv2904c;Name=Rv2904c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2904c-1;rank=1 Chromosome ena CDS 3213912 3214253 . - 0 ID=CDS:Rv2904c;Parent=transcript:Rv2904c;protein_id=Rv2904c ### -Chromosome ena gene 3214628 3215572 . + . ID=gene:Rv2905;Name=lppW;biotype=protein_coding;description=Probable conserved alanine rich lipoprotein LppW;gene_id=Rv2905;logic_name=ena +Chromosome ena gene 3214628 3215572 . + . ID=gene:Rv2905;Name=lppW;biotype=protein_coding;description=Probable conserved alanine rich lipoprotein LppW;gene_id=Rv2905;logic_name=ena Chromosome ena mRNA 3214628 3215572 . + . ID=transcript:Rv2905;Parent=gene:Rv2905;Name=lppW-1;biotype=protein_coding;transcript_id=Rv2905 Chromosome ena exon 3214628 3215572 . + . Parent=transcript:Rv2905;Name=Rv2905-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2905-1;rank=1 Chromosome ena CDS 3214628 3215572 . + 0 ID=CDS:Rv2905;Parent=transcript:Rv2905;protein_id=Rv2905 ### -Chromosome ena gene 3215665 3216357 . - . ID=gene:Rv2906c;Name=trmD;biotype=protein_coding;description=Probable tRNA (guanine-N1)-methyltransferase TrmD (M1G-methyltransferase) (tRNA [GM37] methyltransferase);gene_id=Rv2906c;logic_name=ena +Chromosome ena gene 3215665 3216357 . - . ID=gene:Rv2906c;Name=trmD;biotype=protein_coding;description=Probable tRNA (guanine-N1)-methyltransferase TrmD (M1G-methyltransferase) (tRNA [GM37] methyltransferase);gene_id=Rv2906c;logic_name=ena Chromosome ena mRNA 3215665 3216357 . - . ID=transcript:Rv2906c;Parent=gene:Rv2906c;Name=trmD-1;biotype=protein_coding;transcript_id=Rv2906c Chromosome ena exon 3215665 3216357 . - . Parent=transcript:Rv2906c;Name=Rv2906c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2906c-1;rank=1 Chromosome ena CDS 3215665 3216357 . - 0 ID=CDS:Rv2906c;Parent=transcript:Rv2906c;protein_id=Rv2906c ### -Chromosome ena gene 3216361 3216891 . - . ID=gene:Rv2907c;Name=rimM;biotype=protein_coding;description=Probable 16S rRNA processing protein RimM;gene_id=Rv2907c;logic_name=ena +Chromosome ena gene 3216361 3216891 . - . ID=gene:Rv2907c;Name=rimM;biotype=protein_coding;description=Probable 16S rRNA processing protein RimM;gene_id=Rv2907c;logic_name=ena Chromosome ena mRNA 3216361 3216891 . - . ID=transcript:Rv2907c;Parent=gene:Rv2907c;Name=rimM-1;biotype=protein_coding;transcript_id=Rv2907c Chromosome ena exon 3216361 3216891 . - . Parent=transcript:Rv2907c;Name=Rv2907c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2907c-1;rank=1 Chromosome ena CDS 3216361 3216891 . - 0 ID=CDS:Rv2907c;Parent=transcript:Rv2907c;protein_id=Rv2907c ### -Chromosome ena gene 3216905 3217147 . - . ID=gene:Rv2908c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2908c;logic_name=ena +Chromosome ena gene 3216905 3217147 . - . ID=gene:Rv2908c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2908c;logic_name=ena Chromosome ena mRNA 3216905 3217147 . - . ID=transcript:Rv2908c;Parent=gene:Rv2908c;biotype=protein_coding;transcript_id=Rv2908c Chromosome ena exon 3216905 3217147 . - . Parent=transcript:Rv2908c;Name=Rv2908c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2908c-1;rank=1 Chromosome ena CDS 3216905 3217147 . - 0 ID=CDS:Rv2908c;Parent=transcript:Rv2908c;protein_id=Rv2908c ### -Chromosome ena gene 3217155 3217643 . - . ID=gene:Rv2909c;Name=rpsP;biotype=protein_coding;description=30S ribosomal protein S16 RpsP;gene_id=Rv2909c;logic_name=ena +Chromosome ena gene 3217155 3217643 . - . ID=gene:Rv2909c;Name=rpsP;biotype=protein_coding;description=30S ribosomal protein S16 RpsP;gene_id=Rv2909c;logic_name=ena Chromosome ena mRNA 3217155 3217643 . - . ID=transcript:Rv2909c;Parent=gene:Rv2909c;Name=rpsP-1;biotype=protein_coding;transcript_id=Rv2909c Chromosome ena exon 3217155 3217643 . - . Parent=transcript:Rv2909c;Name=Rv2909c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2909c-1;rank=1 Chromosome ena CDS 3217155 3217643 . - 0 ID=CDS:Rv2909c;Parent=transcript:Rv2909c;protein_id=Rv2909c ### -Chromosome ena gene 3217827 3218270 . - . ID=gene:Rv2910c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2910c;logic_name=ena +Chromosome ena gene 3217827 3218270 . - . ID=gene:Rv2910c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2910c;logic_name=ena Chromosome ena mRNA 3217827 3218270 . - . ID=transcript:Rv2910c;Parent=gene:Rv2910c;biotype=protein_coding;transcript_id=Rv2910c Chromosome ena exon 3217827 3218270 . - . Parent=transcript:Rv2910c;Name=Rv2910c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2910c-1;rank=1 Chromosome ena CDS 3217827 3218270 . - 0 ID=CDS:Rv2910c;Parent=transcript:Rv2910c;protein_id=Rv2910c ### -Chromosome ena gene 3218339 3219214 . + . ID=gene:Rv2911;Name=dacB2;biotype=protein_coding;description=Probable penicillin-binding protein DacB2 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase);gene_id=Rv2911;logic_name=ena +Chromosome ena gene 3218339 3219214 . + . ID=gene:Rv2911;Name=dacB2;biotype=protein_coding;description=Probable penicillin-binding protein DacB2 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase);gene_id=Rv2911;logic_name=ena Chromosome ena mRNA 3218339 3219214 . + . ID=transcript:Rv2911;Parent=gene:Rv2911;Name=dacB2-1;biotype=protein_coding;transcript_id=Rv2911 Chromosome ena exon 3218339 3219214 . + . Parent=transcript:Rv2911;Name=Rv2911-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2911-1;rank=1 Chromosome ena CDS 3218339 3219214 . + 0 ID=CDS:Rv2911;Parent=transcript:Rv2911;protein_id=Rv2911 ### -Chromosome ena gene 3219274 3219861 . - . ID=gene:Rv2912c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv2912c;logic_name=ena +Chromosome ena gene 3219274 3219861 . - . ID=gene:Rv2912c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv2912c;logic_name=ena Chromosome ena mRNA 3219274 3219861 . - . ID=transcript:Rv2912c;Parent=gene:Rv2912c;biotype=protein_coding;transcript_id=Rv2912c Chromosome ena exon 3219274 3219861 . - . Parent=transcript:Rv2912c;Name=Rv2912c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2912c-1;rank=1 Chromosome ena CDS 3219274 3219861 . - 0 ID=CDS:Rv2912c;Parent=transcript:Rv2912c;protein_id=Rv2912c ### -Chromosome ena gene 3219863 3221698 . - . ID=gene:Rv2913c;biotype=protein_coding;description=Possible D-amino acid aminohydrolase (D-amino acid hydrolase);gene_id=Rv2913c;logic_name=ena +Chromosome ena gene 3219863 3221698 . - . ID=gene:Rv2913c;biotype=protein_coding;description=Possible D-amino acid aminohydrolase (D-amino acid hydrolase);gene_id=Rv2913c;logic_name=ena Chromosome ena mRNA 3219863 3221698 . - . ID=transcript:Rv2913c;Parent=gene:Rv2913c;biotype=protein_coding;transcript_id=Rv2913c Chromosome ena exon 3219863 3221698 . - . Parent=transcript:Rv2913c;Name=Rv2913c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2913c-1;rank=1 Chromosome ena CDS 3219863 3221698 . - 0 ID=CDS:Rv2913c;Parent=transcript:Rv2913c;protein_id=Rv2913c ### -Chromosome ena gene 3221767 3223524 . - . ID=gene:Rv2914c;Name=pknI;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase I PknI (protein kinase I) (STPK I) (phosphorylase B kinase kinase) (hydroxyalkyl-protein kinase);gene_id=Rv2914c;logic_name=ena +Chromosome ena gene 3221767 3223524 . - . ID=gene:Rv2914c;Name=pknI;biotype=protein_coding;description=Probable transmembrane serine/threonine-protein kinase I PknI (protein kinase I) (STPK I) (phosphorylase B kinase kinase) (hydroxyalkyl-protein kinase);gene_id=Rv2914c;logic_name=ena Chromosome ena mRNA 3221767 3223524 . - . ID=transcript:Rv2914c;Parent=gene:Rv2914c;Name=pknI-1;biotype=protein_coding;transcript_id=Rv2914c Chromosome ena exon 3221767 3223524 . - . Parent=transcript:Rv2914c;Name=Rv2914c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2914c-1;rank=1 Chromosome ena CDS 3221767 3223524 . - 0 ID=CDS:Rv2914c;Parent=transcript:Rv2914c;protein_id=Rv2914c ### -Chromosome ena gene 3223568 3224680 . - . ID=gene:Rv2915c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2915c;logic_name=ena +Chromosome ena gene 3223568 3224680 . - . ID=gene:Rv2915c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2915c;logic_name=ena Chromosome ena mRNA 3223568 3224680 . - . ID=transcript:Rv2915c;Parent=gene:Rv2915c;biotype=protein_coding;transcript_id=Rv2915c Chromosome ena exon 3223568 3224680 . - . Parent=transcript:Rv2915c;Name=Rv2915c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2915c-1;rank=1 Chromosome ena CDS 3223568 3224680 . - 0 ID=CDS:Rv2915c;Parent=transcript:Rv2915c;protein_id=Rv2915c ### -Chromosome ena gene 3224708 3226285 . - . ID=gene:Rv2916c;Name=ffh;biotype=protein_coding;description=Probable signal recognition particle protein Ffh (fifty-four homolog) (SRP protein);gene_id=Rv2916c;logic_name=ena +Chromosome ena gene 3224708 3226285 . - . ID=gene:Rv2916c;Name=ffh;biotype=protein_coding;description=Probable signal recognition particle protein Ffh (fifty-four homolog) (SRP protein);gene_id=Rv2916c;logic_name=ena Chromosome ena mRNA 3224708 3226285 . - . ID=transcript:Rv2916c;Parent=gene:Rv2916c;Name=ffh-1;biotype=protein_coding;transcript_id=Rv2916c Chromosome ena exon 3224708 3226285 . - . Parent=transcript:Rv2916c;Name=Rv2916c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2916c-1;rank=1 Chromosome ena CDS 3224708 3226285 . - 0 ID=CDS:Rv2916c;Parent=transcript:Rv2916c;protein_id=Rv2916c ### -Chromosome ena gene 3226363 3228243 . + . ID=gene:Rv2917;biotype=protein_coding;description=Conserved hypothetical alanine and arginine rich protein;gene_id=Rv2917;logic_name=ena +Chromosome ena gene 3226363 3228243 . + . ID=gene:Rv2917;biotype=protein_coding;description=Conserved hypothetical alanine and arginine rich protein;gene_id=Rv2917;logic_name=ena Chromosome ena mRNA 3226363 3228243 . + . ID=transcript:Rv2917;Parent=gene:Rv2917;biotype=protein_coding;transcript_id=Rv2917 Chromosome ena exon 3226363 3228243 . + . Parent=transcript:Rv2917;Name=Rv2917-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2917-1;rank=1 Chromosome ena CDS 3226363 3228243 . + 0 ID=CDS:Rv2917;Parent=transcript:Rv2917;protein_id=Rv2917 ### -Chromosome ena gene 3228254 3230680 . - . ID=gene:Rv2918c;Name=glnD;biotype=protein_coding;description=Probable [protein-PII] uridylyltransferase GlnD (PII uridylyl-transferase) (uridylyl removing enzyme) (UTASE);gene_id=Rv2918c;logic_name=ena +Chromosome ena gene 3228254 3230680 . - . ID=gene:Rv2918c;Name=glnD;biotype=protein_coding;description=Probable [protein-PII] uridylyltransferase GlnD (PII uridylyl-transferase) (uridylyl removing enzyme) (UTASE);gene_id=Rv2918c;logic_name=ena Chromosome ena mRNA 3228254 3230680 . - . ID=transcript:Rv2918c;Parent=gene:Rv2918c;Name=glnD-1;biotype=protein_coding;transcript_id=Rv2918c Chromosome ena exon 3228254 3230680 . - . Parent=transcript:Rv2918c;Name=Rv2918c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2918c-1;rank=1 Chromosome ena CDS 3228254 3230680 . - 0 ID=CDS:Rv2918c;Parent=transcript:Rv2918c;protein_id=Rv2918c ### -Chromosome ena gene 3230738 3231076 . - . ID=gene:Rv2919c;Name=glnB;biotype=protein_coding;description=Probable nitrogen regulatory protein P-II GlnB;gene_id=Rv2919c;logic_name=ena +Chromosome ena gene 3230738 3231076 . - . ID=gene:Rv2919c;Name=glnB;biotype=protein_coding;description=Probable nitrogen regulatory protein P-II GlnB;gene_id=Rv2919c;logic_name=ena Chromosome ena mRNA 3230738 3231076 . - . ID=transcript:Rv2919c;Parent=gene:Rv2919c;Name=glnB-1;biotype=protein_coding;transcript_id=Rv2919c Chromosome ena exon 3230738 3231076 . - . Parent=transcript:Rv2919c;Name=Rv2919c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2919c-1;rank=1 Chromosome ena CDS 3230738 3231076 . - 0 ID=CDS:Rv2919c;Parent=transcript:Rv2919c;protein_id=Rv2919c ### -Chromosome ena gene 3231073 3232506 . - . ID=gene:Rv2920c;Name=amt;biotype=protein_coding;description=Probable ammonium-transport integral membrane protein Amt;gene_id=Rv2920c;logic_name=ena +Chromosome ena gene 3231073 3232506 . - . ID=gene:Rv2920c;Name=amt;biotype=protein_coding;description=Probable ammonium-transport integral membrane protein Amt;gene_id=Rv2920c;logic_name=ena Chromosome ena mRNA 3231073 3232506 . - . ID=transcript:Rv2920c;Parent=gene:Rv2920c;Name=amt-1;biotype=protein_coding;transcript_id=Rv2920c Chromosome ena exon 3231073 3232506 . - . Parent=transcript:Rv2920c;Name=Rv2920c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2920c-1;rank=1 Chromosome ena CDS 3231073 3232506 . - 0 ID=CDS:Rv2920c;Parent=transcript:Rv2920c;protein_id=Rv2920c ### -Chromosome ena gene 3232871 3234139 . - . ID=gene:Rv2921c;Name=ftsY;biotype=protein_coding;description=Probable cell division protein FtsY (SRP receptor) (signal recognition particle receptor);gene_id=Rv2921c;logic_name=ena +Chromosome ena gene 3232871 3234139 . - . ID=gene:Rv2921c;Name=ftsY;biotype=protein_coding;description=Probable cell division protein FtsY (SRP receptor) (signal recognition particle receptor);gene_id=Rv2921c;logic_name=ena Chromosome ena mRNA 3232871 3234139 . - . ID=transcript:Rv2921c;Parent=gene:Rv2921c;Name=ftsY-1;biotype=protein_coding;transcript_id=Rv2921c Chromosome ena exon 3232871 3234139 . - . Parent=transcript:Rv2921c;Name=Rv2921c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2921c-1;rank=1 Chromosome ena CDS 3232871 3234139 . - 0 ID=CDS:Rv2921c;Parent=transcript:Rv2921c;protein_id=Rv2921c ### -Chromosome ena gene 3234189 3237806 . - . ID=gene:Rv2922c;Name=smc;biotype=protein_coding;description=Probable chromosome partition protein Smc;gene_id=Rv2922c;logic_name=ena +Chromosome ena gene 3234189 3237806 . - . ID=gene:Rv2922c;Name=smc;biotype=protein_coding;description=Probable chromosome partition protein Smc;gene_id=Rv2922c;logic_name=ena Chromosome ena mRNA 3234189 3237806 . - . ID=transcript:Rv2922c;Parent=gene:Rv2922c;Name=smc-1;biotype=protein_coding;transcript_id=Rv2922c Chromosome ena exon 3234189 3237806 . - . Parent=transcript:Rv2922c;Name=Rv2922c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2922c-1;rank=1 Chromosome ena CDS 3234189 3237806 . - 0 ID=CDS:Rv2922c;Parent=transcript:Rv2922c;protein_id=Rv2922c ### -Chromosome ena gene 3237818 3238099 . - . ID=gene:Rv2922A;Name=acyP;biotype=protein_coding;description=Probable acylphosphatase AcyP (acylphosphate phosphohydrolase);gene_id=Rv2922A;logic_name=ena +Chromosome ena gene 3237818 3238099 . - . ID=gene:Rv2922A;Name=acyP;biotype=protein_coding;description=Probable acylphosphatase AcyP (acylphosphate phosphohydrolase);gene_id=Rv2922A;logic_name=ena Chromosome ena mRNA 3237818 3238099 . - . ID=transcript:Rv2922A;Parent=gene:Rv2922A;Name=acyP-1;biotype=protein_coding;transcript_id=Rv2922A Chromosome ena exon 3237818 3238099 . - . Parent=transcript:Rv2922A;Name=Rv2922A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2922A-1;rank=1 Chromosome ena CDS 3237818 3238099 . - 0 ID=CDS:Rv2922A;Parent=transcript:Rv2922A;protein_id=Rv2922A ### -Chromosome ena gene 3238086 3238499 . - . ID=gene:Rv2923c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2923c;logic_name=ena +Chromosome ena gene 3238086 3238499 . - . ID=gene:Rv2923c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2923c;logic_name=ena Chromosome ena mRNA 3238086 3238499 . - . ID=transcript:Rv2923c;Parent=gene:Rv2923c;biotype=protein_coding;transcript_id=Rv2923c Chromosome ena exon 3238086 3238499 . - . Parent=transcript:Rv2923c;Name=Rv2923c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2923c-1;rank=1 Chromosome ena CDS 3238086 3238499 . - 0 ID=CDS:Rv2923c;Parent=transcript:Rv2923c;protein_id=Rv2923c ### -Chromosome ena gene 3238601 3239470 . - . ID=gene:Rv2924c;Name=fpg;biotype=protein_coding;description=Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase);gene_id=Rv2924c;logic_name=ena +Chromosome ena gene 3238601 3239470 . - . ID=gene:Rv2924c;Name=fpg;biotype=protein_coding;description=Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase);gene_id=Rv2924c;logic_name=ena Chromosome ena mRNA 3238601 3239470 . - . ID=transcript:Rv2924c;Parent=gene:Rv2924c;Name=fpg-1;biotype=protein_coding;transcript_id=Rv2924c Chromosome ena exon 3238601 3239470 . - . Parent=transcript:Rv2924c;Name=Rv2924c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2924c-1;rank=1 Chromosome ena CDS 3238601 3239470 . - 0 ID=CDS:Rv2924c;Parent=transcript:Rv2924c;protein_id=Rv2924c ### -Chromosome ena gene 3239829 3240551 . - . ID=gene:Rv2925c;Name=rnc;biotype=protein_coding;description=Probable ribonuclease III Rnc (RNase III);gene_id=Rv2925c;logic_name=ena +Chromosome ena gene 3239829 3240551 . - . ID=gene:Rv2925c;Name=rnc;biotype=protein_coding;description=Probable ribonuclease III Rnc (RNase III);gene_id=Rv2925c;logic_name=ena Chromosome ena mRNA 3239829 3240551 . - . ID=transcript:Rv2925c;Parent=gene:Rv2925c;Name=rnc-1;biotype=protein_coding;transcript_id=Rv2925c Chromosome ena exon 3239829 3240551 . - . Parent=transcript:Rv2925c;Name=Rv2925c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2925c-1;rank=1 Chromosome ena CDS 3239829 3240551 . - 0 ID=CDS:Rv2925c;Parent=transcript:Rv2925c;protein_id=Rv2925c ### -Chromosome ena gene 3240548 3241171 . - . ID=gene:Rv2926c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2926c;logic_name=ena +Chromosome ena gene 3240548 3241171 . - . ID=gene:Rv2926c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2926c;logic_name=ena Chromosome ena mRNA 3240548 3241171 . - . ID=transcript:Rv2926c;Parent=gene:Rv2926c;biotype=protein_coding;transcript_id=Rv2926c Chromosome ena exon 3240548 3241171 . - . Parent=transcript:Rv2926c;Name=Rv2926c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2926c-1;rank=1 Chromosome ena CDS 3240548 3241171 . - 0 ID=CDS:Rv2926c;Parent=transcript:Rv2926c;protein_id=Rv2926c ### -Chromosome ena gene 3241222 3241959 . - . ID=gene:Rv2927c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2927c;logic_name=ena +Chromosome ena gene 3241222 3241959 . - . ID=gene:Rv2927c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2927c;logic_name=ena Chromosome ena mRNA 3241222 3241959 . - . ID=transcript:Rv2927c;Parent=gene:Rv2927c;biotype=protein_coding;transcript_id=Rv2927c Chromosome ena exon 3241222 3241959 . - . Parent=transcript:Rv2927c;Name=Rv2927c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2927c-1;rank=1 Chromosome ena CDS 3241222 3241959 . - 0 ID=CDS:Rv2927c;Parent=transcript:Rv2927c;protein_id=Rv2927c ### -Chromosome ena gene 3242198 3242983 . + . ID=gene:Rv2928;Name=tesA;biotype=protein_coding;description=Probable thioesterase TesA;gene_id=Rv2928;logic_name=ena +Chromosome ena gene 3242198 3242983 . + . ID=gene:Rv2928;Name=tesA;biotype=protein_coding;description=Probable thioesterase TesA;gene_id=Rv2928;logic_name=ena Chromosome ena mRNA 3242198 3242983 . + . ID=transcript:Rv2928;Parent=gene:Rv2928;Name=tesA-1;biotype=protein_coding;transcript_id=Rv2928 Chromosome ena exon 3242198 3242983 . + . Parent=transcript:Rv2928;Name=Rv2928-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2928-1;rank=1 Chromosome ena CDS 3242198 3242983 . + 0 ID=CDS:Rv2928;Parent=transcript:Rv2928;protein_id=Rv2928 ### -Chromosome ena gene 3242970 3243281 . + . ID=gene:Rv2929;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2929;logic_name=ena +Chromosome ena gene 3242970 3243281 . + . ID=gene:Rv2929;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2929;logic_name=ena Chromosome ena mRNA 3242970 3243281 . + . ID=transcript:Rv2929;Parent=gene:Rv2929;biotype=protein_coding;transcript_id=Rv2929 Chromosome ena exon 3242970 3243281 . + . Parent=transcript:Rv2929;Name=Rv2929-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2929-1;rank=1 Chromosome ena CDS 3242970 3243281 . + 0 ID=CDS:Rv2929;Parent=transcript:Rv2929;protein_id=Rv2929 ### -Chromosome ena gene 3243697 3245448 . + . ID=gene:Rv2930;Name=fadD26;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD26 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2930;logic_name=ena +Chromosome ena gene 3243697 3245448 . + . ID=gene:Rv2930;Name=fadD26;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD26 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2930;logic_name=ena Chromosome ena mRNA 3243697 3245448 . + . ID=transcript:Rv2930;Parent=gene:Rv2930;Name=fadD26-1;biotype=protein_coding;transcript_id=Rv2930 Chromosome ena exon 3243697 3245448 . + . Parent=transcript:Rv2930;Name=Rv2930-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2930-1;rank=1 Chromosome ena CDS 3243697 3245448 . + 0 ID=CDS:Rv2930;Parent=transcript:Rv2930;protein_id=Rv2930 ### -Chromosome ena gene 3245445 3251075 . + . ID=gene:Rv2931;Name=ppsA;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsA;gene_id=Rv2931;logic_name=ena +Chromosome ena gene 3245445 3251075 . + . ID=gene:Rv2931;Name=ppsA;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsA;gene_id=Rv2931;logic_name=ena Chromosome ena mRNA 3245445 3251075 . + . ID=transcript:Rv2931;Parent=gene:Rv2931;Name=ppsA-1;biotype=protein_coding;transcript_id=Rv2931 Chromosome ena exon 3245445 3251075 . + . Parent=transcript:Rv2931;Name=Rv2931-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2931-1;rank=1 Chromosome ena CDS 3245445 3251075 . + 0 ID=CDS:Rv2931;Parent=transcript:Rv2931;protein_id=Rv2931 ### -Chromosome ena gene 3251072 3255688 . + . ID=gene:Rv2932;Name=ppsB;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsB;gene_id=Rv2932;logic_name=ena +Chromosome ena gene 3251072 3255688 . + . ID=gene:Rv2932;Name=ppsB;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsB;gene_id=Rv2932;logic_name=ena Chromosome ena mRNA 3251072 3255688 . + . ID=transcript:Rv2932;Parent=gene:Rv2932;Name=ppsB-1;biotype=protein_coding;transcript_id=Rv2932 Chromosome ena exon 3251072 3255688 . + . Parent=transcript:Rv2932;Name=Rv2932-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2932-1;rank=1 Chromosome ena CDS 3251072 3255688 . + 0 ID=CDS:Rv2932;Parent=transcript:Rv2932;protein_id=Rv2932 ### -Chromosome ena gene 3255685 3262251 . + . ID=gene:Rv2933;Name=ppsC;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsC;gene_id=Rv2933;logic_name=ena +Chromosome ena gene 3255685 3262251 . + . ID=gene:Rv2933;Name=ppsC;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsC;gene_id=Rv2933;logic_name=ena Chromosome ena mRNA 3255685 3262251 . + . ID=transcript:Rv2933;Parent=gene:Rv2933;Name=ppsC-1;biotype=protein_coding;transcript_id=Rv2933 Chromosome ena exon 3255685 3262251 . + . Parent=transcript:Rv2933;Name=Rv2933-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2933-1;rank=1 Chromosome ena CDS 3255685 3262251 . + 0 ID=CDS:Rv2933;Parent=transcript:Rv2933;protein_id=Rv2933 ### -Chromosome ena gene 3262248 3267731 . + . ID=gene:Rv2934;Name=ppsD;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsD;gene_id=Rv2934;logic_name=ena +Chromosome ena gene 3262248 3267731 . + . ID=gene:Rv2934;Name=ppsD;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsD;gene_id=Rv2934;logic_name=ena Chromosome ena mRNA 3262248 3267731 . + . ID=transcript:Rv2934;Parent=gene:Rv2934;Name=ppsD-1;biotype=protein_coding;transcript_id=Rv2934 Chromosome ena exon 3262248 3267731 . + . Parent=transcript:Rv2934;Name=Rv2934-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2934-1;rank=1 Chromosome ena CDS 3262248 3267731 . + 0 ID=CDS:Rv2934;Parent=transcript:Rv2934;protein_id=Rv2934 ### -Chromosome ena gene 3267737 3272203 . + . ID=gene:Rv2935;Name=ppsE;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsE;gene_id=Rv2935;logic_name=ena +Chromosome ena gene 3267737 3272203 . + . ID=gene:Rv2935;Name=ppsE;biotype=protein_coding;description=Phenolpthiocerol synthesis type-I polyketide synthase PpsE;gene_id=Rv2935;logic_name=ena Chromosome ena mRNA 3267737 3272203 . + . ID=transcript:Rv2935;Parent=gene:Rv2935;Name=ppsE-1;biotype=protein_coding;transcript_id=Rv2935 Chromosome ena exon 3267737 3272203 . + . Parent=transcript:Rv2935;Name=Rv2935-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2935-1;rank=1 Chromosome ena CDS 3267737 3272203 . + 0 ID=CDS:Rv2935;Parent=transcript:Rv2935;protein_id=Rv2935 ### -Chromosome ena gene 3272214 3273209 . + . ID=gene:Rv2936;Name=drrA;biotype=protein_coding;description=Daunorubicin-dim-transport ATP-binding protein ABC transporter DrrA;gene_id=Rv2936;logic_name=ena +Chromosome ena gene 3272214 3273209 . + . ID=gene:Rv2936;Name=drrA;biotype=protein_coding;description=Daunorubicin-dim-transport ATP-binding protein ABC transporter DrrA;gene_id=Rv2936;logic_name=ena Chromosome ena mRNA 3272214 3273209 . + . ID=transcript:Rv2936;Parent=gene:Rv2936;Name=drrA-1;biotype=protein_coding;transcript_id=Rv2936 Chromosome ena exon 3272214 3273209 . + . Parent=transcript:Rv2936;Name=Rv2936-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2936-1;rank=1 Chromosome ena CDS 3272214 3273209 . + 0 ID=CDS:Rv2936;Parent=transcript:Rv2936;protein_id=Rv2936 ### -Chromosome ena gene 3273206 3274075 . + . ID=gene:Rv2937;Name=drrB;biotype=protein_coding;description=Daunorubicin-dim-transport integral membrane protein ABC transporter DrrB;gene_id=Rv2937;logic_name=ena +Chromosome ena gene 3273206 3274075 . + . ID=gene:Rv2937;Name=drrB;biotype=protein_coding;description=Daunorubicin-dim-transport integral membrane protein ABC transporter DrrB;gene_id=Rv2937;logic_name=ena Chromosome ena mRNA 3273206 3274075 . + . ID=transcript:Rv2937;Parent=gene:Rv2937;Name=drrB-1;biotype=protein_coding;transcript_id=Rv2937 Chromosome ena exon 3273206 3274075 . + . Parent=transcript:Rv2937;Name=Rv2937-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2937-1;rank=1 Chromosome ena CDS 3273206 3274075 . + 0 ID=CDS:Rv2937;Parent=transcript:Rv2937;protein_id=Rv2937 ### -Chromosome ena gene 3274072 3274902 . + . ID=gene:Rv2938;Name=drrC;biotype=protein_coding;description=Probable daunorubicin-dim-transport integral membrane protein ABC transporter DrrC;gene_id=Rv2938;logic_name=ena +Chromosome ena gene 3274072 3274902 . + . ID=gene:Rv2938;Name=drrC;biotype=protein_coding;description=Probable daunorubicin-dim-transport integral membrane protein ABC transporter DrrC;gene_id=Rv2938;logic_name=ena Chromosome ena mRNA 3274072 3274902 . + . ID=transcript:Rv2938;Parent=gene:Rv2938;Name=drrC-1;biotype=protein_coding;transcript_id=Rv2938 Chromosome ena exon 3274072 3274902 . + . Parent=transcript:Rv2938;Name=Rv2938-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2938-1;rank=1 Chromosome ena CDS 3274072 3274902 . + 0 ID=CDS:Rv2938;Parent=transcript:Rv2938;protein_id=Rv2938 ### -Chromosome ena gene 3274949 3276217 . + . ID=gene:Rv2939;Name=papA5;biotype=protein_coding;description=Possible conserved polyketide synthase associated protein PapA5;gene_id=Rv2939;logic_name=ena +Chromosome ena gene 3274949 3276217 . + . ID=gene:Rv2939;Name=papA5;biotype=protein_coding;description=Possible conserved polyketide synthase associated protein PapA5;gene_id=Rv2939;logic_name=ena Chromosome ena mRNA 3274949 3276217 . + . ID=transcript:Rv2939;Parent=gene:Rv2939;Name=papA5-1;biotype=protein_coding;transcript_id=Rv2939 Chromosome ena exon 3274949 3276217 . + . Parent=transcript:Rv2939;Name=Rv2939-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2939-1;rank=1 Chromosome ena CDS 3274949 3276217 . + 0 ID=CDS:Rv2939;Parent=transcript:Rv2939;protein_id=Rv2939 ### -Chromosome ena gene 3276380 3282715 . - . ID=gene:Rv2940c;Name=mas;biotype=protein_coding;description=Probable multifunctional mycocerosic acid synthase membrane-associated Mas;gene_id=Rv2940c;logic_name=ena +Chromosome ena gene 3276380 3282715 . - . ID=gene:Rv2940c;Name=mas;biotype=protein_coding;description=Probable multifunctional mycocerosic acid synthase membrane-associated Mas;gene_id=Rv2940c;logic_name=ena Chromosome ena mRNA 3276380 3282715 . - . ID=transcript:Rv2940c;Parent=gene:Rv2940c;Name=mas-1;biotype=protein_coding;transcript_id=Rv2940c Chromosome ena exon 3276380 3282715 . - . Parent=transcript:Rv2940c;Name=Rv2940c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2940c-1;rank=1 Chromosome ena CDS 3276380 3282715 . - 0 ID=CDS:Rv2940c;Parent=transcript:Rv2940c;protein_id=Rv2940c ### -Chromosome ena gene 3283335 3285077 . + . ID=gene:Rv2941;Name=fadD28;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD28 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2941;logic_name=ena +Chromosome ena gene 3283335 3285077 . + . ID=gene:Rv2941;Name=fadD28;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD28 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2941;logic_name=ena Chromosome ena mRNA 3283335 3285077 . + . ID=transcript:Rv2941;Parent=gene:Rv2941;Name=fadD28-1;biotype=protein_coding;transcript_id=Rv2941 Chromosome ena exon 3283335 3285077 . + . Parent=transcript:Rv2941;Name=Rv2941-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2941-1;rank=1 Chromosome ena CDS 3283335 3285077 . + 0 ID=CDS:Rv2941;Parent=transcript:Rv2941;protein_id=Rv2941 ### -Chromosome ena gene 3285070 3287832 . + . ID=gene:Rv2942;Name=mmpL7;biotype=protein_coding;description=Conserved transmembrane transport protein MmpL7;gene_id=Rv2942;logic_name=ena +Chromosome ena gene 3285070 3287832 . + . ID=gene:Rv2942;Name=mmpL7;biotype=protein_coding;description=Conserved transmembrane transport protein MmpL7;gene_id=Rv2942;logic_name=ena Chromosome ena mRNA 3285070 3287832 . + . ID=transcript:Rv2942;Parent=gene:Rv2942;Name=mmpL7-1;biotype=protein_coding;transcript_id=Rv2942 Chromosome ena exon 3285070 3287832 . + . Parent=transcript:Rv2942;Name=Rv2942-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2942-1;rank=1 Chromosome ena CDS 3285070 3287832 . + 0 ID=CDS:Rv2942;Parent=transcript:Rv2942;protein_id=Rv2942 ### -Chromosome ena_mobile_element biological_region 3288463 3290504 . + . external_name=IS1533%2C len: 2042 nt. Minimum region corresponding to Insertion sequence IS1533.;logic_name=ena_mobile_element -Chromosome ena gene 3288464 3289705 . + . ID=gene:Rv2943;biotype=protein_coding;description=Probable transposase for insertion sequence element IS1533;gene_id=Rv2943;logic_name=ena +Chromosome ena_mobile_element biological_region 3288463 3290504 . + . external_name=IS1533%2C len: 2042 nt. Minimum region corresponding to Insertion sequence IS1533.;logic_name=ena_mobile_element +Chromosome ena gene 3288464 3289705 . + . ID=gene:Rv2943;biotype=protein_coding;description=Probable transposase for insertion sequence element IS1533;gene_id=Rv2943;logic_name=ena Chromosome ena mRNA 3288464 3289705 . + . ID=transcript:Rv2943;Parent=gene:Rv2943;biotype=protein_coding;transcript_id=Rv2943 Chromosome ena exon 3288464 3289705 . + . Parent=transcript:Rv2943;Name=Rv2943-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2943-1;rank=1 Chromosome ena CDS 3288464 3289705 . + 0 ID=CDS:Rv2943;Parent=transcript:Rv2943;protein_id=Rv2943 ### -Chromosome ena gene 3289705 3290235 . + . ID=gene:Rv2943A;biotype=protein_coding;description=Possible transposase;gene_id=Rv2943A;logic_name=ena +Chromosome ena gene 3289705 3290235 . + . ID=gene:Rv2943A;biotype=protein_coding;description=Possible transposase;gene_id=Rv2943A;logic_name=ena Chromosome ena mRNA 3289705 3290235 . + . ID=transcript:Rv2943A;Parent=gene:Rv2943A;biotype=protein_coding;transcript_id=Rv2943A Chromosome ena exon 3289705 3290235 . + . Parent=transcript:Rv2943A;Name=Rv2943A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2943A-1;rank=1 Chromosome ena CDS 3289705 3290235 . + 0 ID=CDS:Rv2943A;Parent=transcript:Rv2943A;protein_id=Rv2943A ### -Chromosome ena gene 3289790 3290506 . + . ID=gene:Rv2944;biotype=protein_coding;description=Possible transposase for insertion sequence element IS1533;gene_id=Rv2944;logic_name=ena +Chromosome ena gene 3289790 3290506 . + . ID=gene:Rv2944;biotype=protein_coding;description=Possible transposase for insertion sequence element IS1533;gene_id=Rv2944;logic_name=ena Chromosome ena mRNA 3289790 3290506 . + . ID=transcript:Rv2944;Parent=gene:Rv2944;biotype=protein_coding;transcript_id=Rv2944 Chromosome ena exon 3289790 3290506 . + . Parent=transcript:Rv2944;Name=Rv2944-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2944-1;rank=1 Chromosome ena CDS 3289790 3290506 . + 0 ID=CDS:Rv2944;Parent=transcript:Rv2944;protein_id=Rv2944 ### -Chromosome ena gene 3290624 3291325 . - . ID=gene:Rv2945c;Name=lppX;biotype=protein_coding;description=Probable conserved lipoprotein LppX;gene_id=Rv2945c;logic_name=ena +Chromosome ena gene 3290624 3291325 . - . ID=gene:Rv2945c;Name=lppX;biotype=protein_coding;description=Probable conserved lipoprotein LppX;gene_id=Rv2945c;logic_name=ena Chromosome ena mRNA 3290624 3291325 . - . ID=transcript:Rv2945c;Parent=gene:Rv2945c;Name=lppX-1;biotype=protein_coding;transcript_id=Rv2945c Chromosome ena exon 3290624 3291325 . - . Parent=transcript:Rv2945c;Name=Rv2945c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2945c-1;rank=1 Chromosome ena CDS 3290624 3291325 . - 0 ID=CDS:Rv2945c;Parent=transcript:Rv2945c;protein_id=Rv2945c ### -Chromosome ena gene 3291503 3296353 . - . ID=gene:Rv2946c;Name=pks1;biotype=protein_coding;description=Probable polyketide synthase Pks1;gene_id=Rv2946c;logic_name=ena +Chromosome ena gene 3291503 3296353 . - . ID=gene:Rv2946c;Name=pks1;biotype=protein_coding;description=Probable polyketide synthase Pks1;gene_id=Rv2946c;logic_name=ena Chromosome ena mRNA 3291503 3296353 . - . ID=transcript:Rv2946c;Parent=gene:Rv2946c;Name=pks1-1;biotype=protein_coding;transcript_id=Rv2946c Chromosome ena exon 3291503 3296353 . - . Parent=transcript:Rv2946c;Name=Rv2946c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2946c-1;rank=1 Chromosome ena CDS 3291503 3296353 . - 0 ID=CDS:Rv2946c;Parent=transcript:Rv2946c;protein_id=Rv2946c ### -Chromosome ena gene 3296350 3297840 . - . ID=gene:Rv2947c;Name=pks15;biotype=protein_coding;description=Probable polyketide synthase Pks15;gene_id=Rv2947c;logic_name=ena +Chromosome ena gene 3296350 3297840 . - . ID=gene:Rv2947c;Name=pks15;biotype=protein_coding;description=Probable polyketide synthase Pks15;gene_id=Rv2947c;logic_name=ena Chromosome ena mRNA 3296350 3297840 . - . ID=transcript:Rv2947c;Parent=gene:Rv2947c;Name=pks15-1;biotype=protein_coding;transcript_id=Rv2947c Chromosome ena exon 3296350 3297840 . - . Parent=transcript:Rv2947c;Name=Rv2947c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2947c-1;rank=1 Chromosome ena CDS 3296350 3297840 . - 0 ID=CDS:Rv2947c;Parent=transcript:Rv2947c;protein_id=Rv2947c ### -Chromosome ena gene 3297837 3299954 . - . ID=gene:Rv2948c;Name=fadD22;biotype=protein_coding;description=P-hydroxybenzoyl-AMP ligase FadD22;gene_id=Rv2948c;logic_name=ena +Chromosome ena gene 3297837 3299954 . - . ID=gene:Rv2948c;Name=fadD22;biotype=protein_coding;description=P-hydroxybenzoyl-AMP ligase FadD22;gene_id=Rv2948c;logic_name=ena Chromosome ena mRNA 3297837 3299954 . - . ID=transcript:Rv2948c;Parent=gene:Rv2948c;Name=fadD22-1;biotype=protein_coding;transcript_id=Rv2948c Chromosome ena exon 3297837 3299954 . - . Parent=transcript:Rv2948c;Name=Rv2948c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2948c-1;rank=1 Chromosome ena CDS 3297837 3299954 . - 0 ID=CDS:Rv2948c;Parent=transcript:Rv2948c;protein_id=Rv2948c ### -Chromosome ena gene 3299971 3300570 . - . ID=gene:Rv2949c;biotype=protein_coding;description=Chorismate pyruvate lyase;gene_id=Rv2949c;logic_name=ena +Chromosome ena gene 3299971 3300570 . - . ID=gene:Rv2949c;biotype=protein_coding;description=Chorismate pyruvate lyase;gene_id=Rv2949c;logic_name=ena Chromosome ena mRNA 3299971 3300570 . - . ID=transcript:Rv2949c;Parent=gene:Rv2949c;biotype=protein_coding;transcript_id=Rv2949c Chromosome ena exon 3299971 3300570 . - . Parent=transcript:Rv2949c;Name=Rv2949c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2949c-1;rank=1 Chromosome ena CDS 3299971 3300570 . - 0 ID=CDS:Rv2949c;Parent=transcript:Rv2949c;protein_id=Rv2949c ### -Chromosome ena gene 3300596 3302455 . - . ID=gene:Rv2950c;Name=fadD29;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD29 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2950c;logic_name=ena +Chromosome ena gene 3300596 3302455 . - . ID=gene:Rv2950c;Name=fadD29;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD29 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv2950c;logic_name=ena Chromosome ena mRNA 3300596 3302455 . - . ID=transcript:Rv2950c;Parent=gene:Rv2950c;Name=fadD29-1;biotype=protein_coding;transcript_id=Rv2950c Chromosome ena exon 3300596 3302455 . - . Parent=transcript:Rv2950c;Name=Rv2950c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2950c-1;rank=1 Chromosome ena CDS 3300596 3302455 . - 0 ID=CDS:Rv2950c;Parent=transcript:Rv2950c;protein_id=Rv2950c ### -Chromosome ena gene 3303103 3304248 . - . ID=gene:Rv2951c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2951c;logic_name=ena +Chromosome ena gene 3303103 3304248 . - . ID=gene:Rv2951c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv2951c;logic_name=ena Chromosome ena mRNA 3303103 3304248 . - . ID=transcript:Rv2951c;Parent=gene:Rv2951c;biotype=protein_coding;transcript_id=Rv2951c Chromosome ena exon 3303103 3304248 . - . Parent=transcript:Rv2951c;Name=Rv2951c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2951c-1;rank=1 Chromosome ena CDS 3303103 3304248 . - 0 ID=CDS:Rv2951c;Parent=transcript:Rv2951c;protein_id=Rv2951c ### -Chromosome ena gene 3304441 3305253 . + . ID=gene:Rv2952;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2952;logic_name=ena +Chromosome ena gene 3304441 3305253 . + . ID=gene:Rv2952;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2952;logic_name=ena Chromosome ena mRNA 3304441 3305253 . + . ID=transcript:Rv2952;Parent=gene:Rv2952;biotype=protein_coding;transcript_id=Rv2952 Chromosome ena exon 3304441 3305253 . + . Parent=transcript:Rv2952;Name=Rv2952-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2952-1;rank=1 Chromosome ena CDS 3304441 3305253 . + 0 ID=CDS:Rv2952;Parent=transcript:Rv2952;protein_id=Rv2952 ### -Chromosome ena gene 3305279 3306535 . + . ID=gene:Rv2953;biotype=protein_coding;description=Enoyl reductase;gene_id=Rv2953;logic_name=ena +Chromosome ena gene 3305279 3306535 . + . ID=gene:Rv2953;biotype=protein_coding;description=Enoyl reductase;gene_id=Rv2953;logic_name=ena Chromosome ena mRNA 3305279 3306535 . + . ID=transcript:Rv2953;Parent=gene:Rv2953;biotype=protein_coding;transcript_id=Rv2953 Chromosome ena exon 3305279 3306535 . + . Parent=transcript:Rv2953;Name=Rv2953-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2953-1;rank=1 Chromosome ena CDS 3305279 3306535 . + 0 ID=CDS:Rv2953;Parent=transcript:Rv2953;protein_id=Rv2953 ### -Chromosome ena gene 3306666 3307391 . - . ID=gene:Rv2954c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2954c;logic_name=ena +Chromosome ena gene 3306666 3307391 . - . ID=gene:Rv2954c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2954c;logic_name=ena Chromosome ena mRNA 3306666 3307391 . - . ID=transcript:Rv2954c;Parent=gene:Rv2954c;biotype=protein_coding;transcript_id=Rv2954c Chromosome ena exon 3306666 3307391 . - . Parent=transcript:Rv2954c;Name=Rv2954c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2954c-1;rank=1 Chromosome ena CDS 3306666 3307391 . - 0 ID=CDS:Rv2954c;Parent=transcript:Rv2954c;protein_id=Rv2954c ### -Chromosome ena gene 3307580 3308545 . - . ID=gene:Rv2955c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2955c;logic_name=ena +Chromosome ena gene 3307580 3308545 . - . ID=gene:Rv2955c;biotype=protein_coding;description=Conserved protein;gene_id=Rv2955c;logic_name=ena Chromosome ena mRNA 3307580 3308545 . - . ID=transcript:Rv2955c;Parent=gene:Rv2955c;biotype=protein_coding;transcript_id=Rv2955c Chromosome ena exon 3307580 3308545 . - . Parent=transcript:Rv2955c;Name=Rv2955c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2955c-1;rank=1 Chromosome ena CDS 3307580 3308545 . - 0 ID=CDS:Rv2955c;Parent=transcript:Rv2955c;protein_id=Rv2955c ### -Chromosome ena gene 3308668 3309399 . + . ID=gene:Rv2956;biotype=protein_coding;description=Conserved protein;gene_id=Rv2956;logic_name=ena +Chromosome ena gene 3308668 3309399 . + . ID=gene:Rv2956;biotype=protein_coding;description=Conserved protein;gene_id=Rv2956;logic_name=ena Chromosome ena mRNA 3308668 3309399 . + . ID=transcript:Rv2956;Parent=gene:Rv2956;biotype=protein_coding;transcript_id=Rv2956 Chromosome ena exon 3308668 3309399 . + . Parent=transcript:Rv2956;Name=Rv2956-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2956-1;rank=1 Chromosome ena CDS 3308668 3309399 . + 0 ID=CDS:Rv2956;Parent=transcript:Rv2956;protein_id=Rv2956 ### -Chromosome ena gene 3309470 3310297 . + . ID=gene:Rv2957;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2957;logic_name=ena +Chromosome ena gene 3309470 3310297 . + . ID=gene:Rv2957;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2957;logic_name=ena Chromosome ena mRNA 3309470 3310297 . + . ID=transcript:Rv2957;Parent=gene:Rv2957;biotype=protein_coding;transcript_id=Rv2957 Chromosome ena exon 3309470 3310297 . + . Parent=transcript:Rv2957;Name=Rv2957-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2957-1;rank=1 Chromosome ena CDS 3309470 3310297 . + 0 ID=CDS:Rv2957;Parent=transcript:Rv2957;protein_id=Rv2957 ### -Chromosome ena gene 3310714 3312000 . - . ID=gene:Rv2958c;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2958c;logic_name=ena +Chromosome ena gene 3310714 3312000 . - . ID=gene:Rv2958c;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2958c;logic_name=ena Chromosome ena mRNA 3310714 3312000 . - . ID=transcript:Rv2958c;Parent=gene:Rv2958c;biotype=protein_coding;transcript_id=Rv2958c Chromosome ena exon 3310714 3312000 . - . Parent=transcript:Rv2958c;Name=Rv2958c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2958c-1;rank=1 Chromosome ena CDS 3310714 3312000 . - 0 ID=CDS:Rv2958c;Parent=transcript:Rv2958c;protein_id=Rv2958c ### -Chromosome ena gene 3312101 3312838 . - . ID=gene:Rv2959c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2959c;logic_name=ena +Chromosome ena gene 3312101 3312838 . - . ID=gene:Rv2959c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2959c;logic_name=ena Chromosome ena mRNA 3312101 3312838 . - . ID=transcript:Rv2959c;Parent=gene:Rv2959c;biotype=protein_coding;transcript_id=Rv2959c Chromosome ena exon 3312101 3312838 . - . Parent=transcript:Rv2959c;Name=Rv2959c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2959c-1;rank=1 Chromosome ena CDS 3312101 3312838 . - 0 ID=CDS:Rv2959c;Parent=transcript:Rv2959c;protein_id=Rv2959c ### -Chromosome ena gene 3312953 3313201 . - . ID=gene:Rv2960c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2960c;logic_name=ena +Chromosome ena gene 3312953 3313201 . - . ID=gene:Rv2960c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2960c;logic_name=ena Chromosome ena mRNA 3312953 3313201 . - . ID=transcript:Rv2960c;Parent=gene:Rv2960c;biotype=protein_coding;transcript_id=Rv2960c Chromosome ena exon 3312953 3313201 . - . Parent=transcript:Rv2960c;Name=Rv2960c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2960c-1;rank=1 Chromosome ena CDS 3312953 3313201 . - 0 ID=CDS:Rv2960c;Parent=transcript:Rv2960c;protein_id=Rv2960c ### -Chromosome ena gene 3313283 3313672 . + . ID=gene:Rv2961;biotype=protein_coding;description=Probable transposase;gene_id=Rv2961;logic_name=ena +Chromosome ena gene 3313283 3313672 . + . ID=gene:Rv2961;biotype=protein_coding;description=Probable transposase;gene_id=Rv2961;logic_name=ena Chromosome ena mRNA 3313283 3313672 . + . ID=transcript:Rv2961;Parent=gene:Rv2961;biotype=protein_coding;transcript_id=Rv2961 Chromosome ena exon 3313283 3313672 . + . Parent=transcript:Rv2961;Name=Rv2961-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2961-1;rank=1 Chromosome ena CDS 3313283 3313672 . + 0 ID=CDS:Rv2961;Parent=transcript:Rv2961;protein_id=Rv2961 ### -Chromosome ena gene 3313773 3315122 . - . ID=gene:Rv2962c;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2962c;logic_name=ena +Chromosome ena gene 3313773 3315122 . - . ID=gene:Rv2962c;biotype=protein_coding;description=Possible glycosyl transferase;gene_id=Rv2962c;logic_name=ena Chromosome ena mRNA 3313773 3315122 . - . ID=transcript:Rv2962c;Parent=gene:Rv2962c;biotype=protein_coding;transcript_id=Rv2962c Chromosome ena exon 3313773 3315122 . - . Parent=transcript:Rv2962c;Name=Rv2962c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2962c-1;rank=1 Chromosome ena CDS 3313773 3315122 . - 0 ID=CDS:Rv2962c;Parent=transcript:Rv2962c;protein_id=Rv2962c ### -Chromosome ena gene 3315236 3316456 . + . ID=gene:Rv2963;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2963;logic_name=ena +Chromosome ena gene 3315236 3316456 . + . ID=gene:Rv2963;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv2963;logic_name=ena Chromosome ena mRNA 3315236 3316456 . + . ID=transcript:Rv2963;Parent=gene:Rv2963;biotype=protein_coding;transcript_id=Rv2963 Chromosome ena exon 3315236 3316456 . + . Parent=transcript:Rv2963;Name=Rv2963-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2963-1;rank=1 Chromosome ena CDS 3315236 3316456 . + 0 ID=CDS:Rv2963;Parent=transcript:Rv2963;protein_id=Rv2963 ### -Chromosome ena gene 3316529 3317461 . + . ID=gene:Rv2964;Name=purU;biotype=protein_coding;description=Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase);gene_id=Rv2964;logic_name=ena +Chromosome ena gene 3316529 3317461 . + . ID=gene:Rv2964;Name=purU;biotype=protein_coding;description=Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase);gene_id=Rv2964;logic_name=ena Chromosome ena mRNA 3316529 3317461 . + . ID=transcript:Rv2964;Parent=gene:Rv2964;Name=purU-1;biotype=protein_coding;transcript_id=Rv2964 Chromosome ena exon 3316529 3317461 . + . Parent=transcript:Rv2964;Name=Rv2964-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2964-1;rank=1 Chromosome ena CDS 3316529 3317461 . + 0 ID=CDS:Rv2964;Parent=transcript:Rv2964;protein_id=Rv2964 ### -Chromosome ena gene 3318330 3318815 . - . ID=gene:Rv2965c;Name=kdtB;biotype=protein_coding;description=Probable phosphopantetheine adenylyltransferase KdtB (pantetheine-phosphate adenylyltransferase) (PPAT) (dephospho-CoA pyrophosphorylase);gene_id=Rv2965c;logic_name=ena +Chromosome ena gene 3318330 3318815 . - . ID=gene:Rv2965c;Name=kdtB;biotype=protein_coding;description=Probable phosphopantetheine adenylyltransferase KdtB (pantetheine-phosphate adenylyltransferase) (PPAT) (dephospho-CoA pyrophosphorylase);gene_id=Rv2965c;logic_name=ena Chromosome ena mRNA 3318330 3318815 . - . ID=transcript:Rv2965c;Parent=gene:Rv2965c;Name=kdtB-1;biotype=protein_coding;transcript_id=Rv2965c Chromosome ena exon 3318330 3318815 . - . Parent=transcript:Rv2965c;Name=Rv2965c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2965c-1;rank=1 Chromosome ena CDS 3318330 3318815 . - 0 ID=CDS:Rv2965c;Parent=transcript:Rv2965c;protein_id=Rv2965c ### -Chromosome ena gene 3318901 3319467 . - . ID=gene:Rv2966c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2966c;logic_name=ena +Chromosome ena gene 3318901 3319467 . - . ID=gene:Rv2966c;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv2966c;logic_name=ena Chromosome ena mRNA 3318901 3319467 . - . ID=transcript:Rv2966c;Parent=gene:Rv2966c;biotype=protein_coding;transcript_id=Rv2966c Chromosome ena exon 3318901 3319467 . - . Parent=transcript:Rv2966c;Name=Rv2966c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2966c-1;rank=1 Chromosome ena CDS 3318901 3319467 . - 0 ID=CDS:Rv2966c;Parent=transcript:Rv2966c;protein_id=Rv2966c ### -Chromosome ena gene 3319663 3323046 . - . ID=gene:Rv2967c;Name=pca;biotype=protein_coding;description=Probable pyruvate carboxylase Pca (pyruvic carboxylase);gene_id=Rv2967c;logic_name=ena +Chromosome ena gene 3319663 3323046 . - . ID=gene:Rv2967c;Name=pca;biotype=protein_coding;description=Probable pyruvate carboxylase Pca (pyruvic carboxylase);gene_id=Rv2967c;logic_name=ena Chromosome ena mRNA 3319663 3323046 . - . ID=transcript:Rv2967c;Parent=gene:Rv2967c;Name=pca-1;biotype=protein_coding;transcript_id=Rv2967c Chromosome ena exon 3319663 3323046 . - . Parent=transcript:Rv2967c;Name=Rv2967c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2967c-1;rank=1 Chromosome ena CDS 3319663 3323046 . - 0 ID=CDS:Rv2967c;Parent=transcript:Rv2967c;protein_id=Rv2967c ### -Chromosome ena gene 3323071 3323703 . - . ID=gene:Rv2968c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2968c;logic_name=ena +Chromosome ena gene 3323071 3323703 . - . ID=gene:Rv2968c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2968c;logic_name=ena Chromosome ena mRNA 3323071 3323703 . - . ID=transcript:Rv2968c;Parent=gene:Rv2968c;biotype=protein_coding;transcript_id=Rv2968c Chromosome ena exon 3323071 3323703 . - . Parent=transcript:Rv2968c;Name=Rv2968c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2968c-1;rank=1 Chromosome ena CDS 3323071 3323703 . - 0 ID=CDS:Rv2968c;Parent=transcript:Rv2968c;protein_id=Rv2968c ### -Chromosome ena gene 3323709 3324476 . - . ID=gene:Rv2969c;biotype=protein_coding;description=Possible conserved membrane or secreted protein;gene_id=Rv2969c;logic_name=ena +Chromosome ena gene 3323709 3324476 . - . ID=gene:Rv2969c;biotype=protein_coding;description=Possible conserved membrane or secreted protein;gene_id=Rv2969c;logic_name=ena Chromosome ena mRNA 3323709 3324476 . - . ID=transcript:Rv2969c;Parent=gene:Rv2969c;biotype=protein_coding;transcript_id=Rv2969c Chromosome ena exon 3323709 3324476 . - . Parent=transcript:Rv2969c;Name=Rv2969c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2969c-1;rank=1 Chromosome ena CDS 3323709 3324476 . - 0 ID=CDS:Rv2969c;Parent=transcript:Rv2969c;protein_id=Rv2969c ### -Chromosome ena gene 3324573 3325703 . - . ID=gene:Rv2970c;Name=lipN;biotype=protein_coding;description=Probable lipase/esterase LipN;gene_id=Rv2970c;logic_name=ena +Chromosome ena gene 3324573 3325703 . - . ID=gene:Rv2970c;Name=lipN;biotype=protein_coding;description=Probable lipase/esterase LipN;gene_id=Rv2970c;logic_name=ena Chromosome ena mRNA 3324573 3325703 . - . ID=transcript:Rv2970c;Parent=gene:Rv2970c;Name=lipN-1;biotype=protein_coding;transcript_id=Rv2970c Chromosome ena exon 3324573 3325703 . - . Parent=transcript:Rv2970c;Name=Rv2970c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2970c-1;rank=1 Chromosome ena CDS 3324573 3325703 . - 0 ID=CDS:Rv2970c;Parent=transcript:Rv2970c;protein_id=Rv2970c ### -Chromosome ena gene 3325934 3326104 . + . ID=gene:Rv2970A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2970A;logic_name=ena +Chromosome ena gene 3325934 3326104 . + . ID=gene:Rv2970A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2970A;logic_name=ena Chromosome ena mRNA 3325934 3326104 . + . ID=transcript:Rv2970A;Parent=gene:Rv2970A;biotype=protein_coding;transcript_id=Rv2970A Chromosome ena exon 3325934 3326104 . + . Parent=transcript:Rv2970A;Name=Rv2970A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2970A-1;rank=1 Chromosome ena CDS 3325934 3326104 . + 0 ID=CDS:Rv2970A;Parent=transcript:Rv2970A;protein_id=Rv2970A ### -Chromosome ena gene 3326101 3326949 . + . ID=gene:Rv2971;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2971;logic_name=ena +Chromosome ena gene 3326101 3326949 . + . ID=gene:Rv2971;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv2971;logic_name=ena Chromosome ena mRNA 3326101 3326949 . + . ID=transcript:Rv2971;Parent=gene:Rv2971;biotype=protein_coding;transcript_id=Rv2971 Chromosome ena exon 3326101 3326949 . + . Parent=transcript:Rv2971;Name=Rv2971-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2971-1;rank=1 Chromosome ena CDS 3326101 3326949 . + 0 ID=CDS:Rv2971;Parent=transcript:Rv2971;protein_id=Rv2971 ### -Chromosome ena gene 3327023 3327736 . - . ID=gene:Rv2972c;biotype=protein_coding;description=Possible conserved membrane or exported protein;gene_id=Rv2972c;logic_name=ena +Chromosome ena gene 3327023 3327736 . - . ID=gene:Rv2972c;biotype=protein_coding;description=Possible conserved membrane or exported protein;gene_id=Rv2972c;logic_name=ena Chromosome ena mRNA 3327023 3327736 . - . ID=transcript:Rv2972c;Parent=gene:Rv2972c;biotype=protein_coding;transcript_id=Rv2972c Chromosome ena exon 3327023 3327736 . - . Parent=transcript:Rv2972c;Name=Rv2972c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2972c-1;rank=1 Chromosome ena CDS 3327023 3327736 . - 0 ID=CDS:Rv2972c;Parent=transcript:Rv2972c;protein_id=Rv2972c ### -Chromosome ena gene 3327733 3329946 . - . ID=gene:Rv2973c;Name=recG;biotype=protein_coding;description=Probable ATP-dependent DNA helicase RecG;gene_id=Rv2973c;logic_name=ena +Chromosome ena gene 3327733 3329946 . - . ID=gene:Rv2973c;Name=recG;biotype=protein_coding;description=Probable ATP-dependent DNA helicase RecG;gene_id=Rv2973c;logic_name=ena Chromosome ena mRNA 3327733 3329946 . - . ID=transcript:Rv2973c;Parent=gene:Rv2973c;Name=recG-1;biotype=protein_coding;transcript_id=Rv2973c Chromosome ena exon 3327733 3329946 . - . Parent=transcript:Rv2973c;Name=Rv2973c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2973c-1;rank=1 Chromosome ena CDS 3327733 3329946 . - 0 ID=CDS:Rv2973c;Parent=transcript:Rv2973c;protein_id=Rv2973c ### -Chromosome ena gene 3329949 3331361 . - . ID=gene:Rv2974c;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2974c;logic_name=ena +Chromosome ena gene 3329949 3331361 . - . ID=gene:Rv2974c;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2974c;logic_name=ena Chromosome ena mRNA 3329949 3331361 . - . ID=transcript:Rv2974c;Parent=gene:Rv2974c;biotype=protein_coding;transcript_id=Rv2974c Chromosome ena exon 3329949 3331361 . - . Parent=transcript:Rv2974c;Name=Rv2974c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2974c-1;rank=1 Chromosome ena CDS 3329949 3331361 . - 0 ID=CDS:Rv2974c;Parent=transcript:Rv2974c;protein_id=Rv2974c ### -Chromosome ena gene 3331358 3331612 . - . ID=gene:Rv2975c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2975c;logic_name=ena +Chromosome ena gene 3331358 3331612 . - . ID=gene:Rv2975c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2975c;logic_name=ena Chromosome ena mRNA 3331358 3331612 . - . ID=transcript:Rv2975c;Parent=gene:Rv2975c;biotype=protein_coding;transcript_id=Rv2975c Chromosome ena exon 3331358 3331612 . - . Parent=transcript:Rv2975c;Name=Rv2975c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2975c-1;rank=1 Chromosome ena CDS 3331358 3331612 . - 0 ID=CDS:Rv2975c;Parent=transcript:Rv2975c;protein_id=Rv2975c ### -Chromosome ena gene 3332071 3332754 . - . ID=gene:Rv2976c;Name=ung;biotype=protein_coding;description=Probable uracil-DNA glycosylase Ung (UDG);gene_id=Rv2976c;logic_name=ena +Chromosome ena gene 3332071 3332754 . - . ID=gene:Rv2976c;Name=ung;biotype=protein_coding;description=Probable uracil-DNA glycosylase Ung (UDG);gene_id=Rv2976c;logic_name=ena Chromosome ena mRNA 3332071 3332754 . - . ID=transcript:Rv2976c;Parent=gene:Rv2976c;Name=ung-1;biotype=protein_coding;transcript_id=Rv2976c Chromosome ena exon 3332071 3332754 . - . Parent=transcript:Rv2976c;Name=Rv2976c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2976c-1;rank=1 Chromosome ena CDS 3332071 3332754 . - 0 ID=CDS:Rv2976c;Parent=transcript:Rv2976c;protein_id=Rv2976c ### -Chromosome ena gene 3332787 3333788 . - . ID=gene:Rv2977c;Name=thiL;biotype=protein_coding;description=Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase);gene_id=Rv2977c;logic_name=ena +Chromosome ena gene 3332787 3333788 . - . ID=gene:Rv2977c;Name=thiL;biotype=protein_coding;description=Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase);gene_id=Rv2977c;logic_name=ena Chromosome ena mRNA 3332787 3333788 . - . ID=transcript:Rv2977c;Parent=gene:Rv2977c;Name=thiL-1;biotype=protein_coding;transcript_id=Rv2977c Chromosome ena exon 3332787 3333788 . - . Parent=transcript:Rv2977c;Name=Rv2977c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2977c-1;rank=1 Chromosome ena CDS 3332787 3333788 . - 0 ID=CDS:Rv2977c;Parent=transcript:Rv2977c;protein_id=Rv2977c ### -Chromosome ena_mobile_element biological_region 3333768 3335792 . - . external_name=IS1538%2C len: 2025 nt. Similar to other Insertion sequence elements in M. tuberculosis e.g. IS1535%2C IS1536%2CIS1537%2C %26 IS1539 (EM_NEW:MTCY274 Z74024 Mycobacterium tuberculosis cosmid Y274);logic_name=ena_mobile_element -Chromosome ena gene 3333785 3335164 . - . ID=gene:Rv2978c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2978c;logic_name=ena +Chromosome ena_mobile_element biological_region 3333768 3335792 . - . external_name=IS1538%2C len: 2025 nt. Similar to other Insertion sequence elements in M. tuberculosis e.g. IS1535%2C IS1536%2CIS1537%2C %26 IS1539 (EM_NEW:MTCY274 Z74024 Mycobacterium tuberculosis cosmid Y274);logic_name=ena_mobile_element +Chromosome ena gene 3333785 3335164 . - . ID=gene:Rv2978c;biotype=protein_coding;description=Probable transposase;gene_id=Rv2978c;logic_name=ena Chromosome ena mRNA 3333785 3335164 . - . ID=transcript:Rv2978c;Parent=gene:Rv2978c;biotype=protein_coding;transcript_id=Rv2978c Chromosome ena exon 3333785 3335164 . - . Parent=transcript:Rv2978c;Name=Rv2978c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2978c-1;rank=1 Chromosome ena CDS 3333785 3335164 . - 0 ID=CDS:Rv2978c;Parent=transcript:Rv2978c;protein_id=Rv2978c ### -Chromosome ena gene 3335164 3335748 . - . ID=gene:Rv2979c;biotype=protein_coding;description=Probable resolvase;gene_id=Rv2979c;logic_name=ena +Chromosome ena gene 3335164 3335748 . - . ID=gene:Rv2979c;biotype=protein_coding;description=Probable resolvase;gene_id=Rv2979c;logic_name=ena Chromosome ena mRNA 3335164 3335748 . - . ID=transcript:Rv2979c;Parent=gene:Rv2979c;biotype=protein_coding;transcript_id=Rv2979c Chromosome ena exon 3335164 3335748 . - . Parent=transcript:Rv2979c;Name=Rv2979c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2979c-1;rank=1 Chromosome ena CDS 3335164 3335748 . - 0 ID=CDS:Rv2979c;Parent=transcript:Rv2979c;protein_id=Rv2979c ### -Chromosome ena gene 3335960 3336505 . + . ID=gene:Rv2980;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv2980;logic_name=ena +Chromosome ena gene 3335960 3336505 . + . ID=gene:Rv2980;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv2980;logic_name=ena Chromosome ena mRNA 3335960 3336505 . + . ID=transcript:Rv2980;Parent=gene:Rv2980;biotype=protein_coding;transcript_id=Rv2980 Chromosome ena exon 3335960 3336505 . + . Parent=transcript:Rv2980;Name=Rv2980-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2980-1;rank=1 Chromosome ena CDS 3335960 3336505 . + 0 ID=CDS:Rv2980;Parent=transcript:Rv2980;protein_id=Rv2980 ### -Chromosome ena gene 3336796 3337917 . - . ID=gene:Rv2981c;Name=ddlA;biotype=protein_coding;description=Probable D-alanine--D-alanine ligase DdlA (D-alanylalanine synthetase) (D-ala-D-ala ligase);gene_id=Rv2981c;logic_name=ena +Chromosome ena gene 3336796 3337917 . - . ID=gene:Rv2981c;Name=ddlA;biotype=protein_coding;description=Probable D-alanine--D-alanine ligase DdlA (D-alanylalanine synthetase) (D-ala-D-ala ligase);gene_id=Rv2981c;logic_name=ena Chromosome ena mRNA 3336796 3337917 . - . ID=transcript:Rv2981c;Parent=gene:Rv2981c;Name=ddlA-1;biotype=protein_coding;transcript_id=Rv2981c Chromosome ena exon 3336796 3337917 . - . Parent=transcript:Rv2981c;Name=Rv2981c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2981c-1;rank=1 Chromosome ena CDS 3336796 3337917 . - 0 ID=CDS:Rv2981c;Parent=transcript:Rv2981c;protein_id=Rv2981c ### -Chromosome ena gene 3337995 3338999 . - . ID=gene:Rv2982c;Name=gpdA2;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase);gene_id=Rv2982c;logic_name=ena +Chromosome ena gene 3337995 3338999 . - . ID=gene:Rv2982c;Name=gpdA2;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase);gene_id=Rv2982c;logic_name=ena Chromosome ena mRNA 3337995 3338999 . - . ID=transcript:Rv2982c;Parent=gene:Rv2982c;Name=gpdA2-1;biotype=protein_coding;transcript_id=Rv2982c Chromosome ena exon 3337995 3338999 . - . Parent=transcript:Rv2982c;Name=Rv2982c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2982c-1;rank=1 Chromosome ena CDS 3337995 3338999 . - 0 ID=CDS:Rv2982c;Parent=transcript:Rv2982c;protein_id=Rv2982c ### -Chromosome ena gene 3339118 3339762 . + . ID=gene:Rv2983;Name=fbiD;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2983;logic_name=ena +Chromosome ena gene 3339118 3339762 . + . ID=gene:Rv2983;Name=fbiD;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv2983;logic_name=ena Chromosome ena mRNA 3339118 3339762 . + . ID=transcript:Rv2983;Parent=gene:Rv2983;Name=fbiD-1;biotype=protein_coding;transcript_id=Rv2983 Chromosome ena exon 3339118 3339762 . + . Parent=transcript:Rv2983;Name=Rv2983-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2983-1;rank=1 Chromosome ena CDS 3339118 3339762 . + 0 ID=CDS:Rv2983;Parent=transcript:Rv2983;protein_id=Rv2983 ### -Chromosome ena gene 3339854 3342082 . + . ID=gene:Rv2984;Name=ppk1;biotype=protein_coding;description=Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase);gene_id=Rv2984;logic_name=ena +Chromosome ena gene 3339854 3342082 . + . ID=gene:Rv2984;Name=ppk1;biotype=protein_coding;description=Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase);gene_id=Rv2984;logic_name=ena Chromosome ena mRNA 3339854 3342082 . + . ID=transcript:Rv2984;Parent=gene:Rv2984;Name=ppk1-1;biotype=protein_coding;transcript_id=Rv2984 Chromosome ena exon 3339854 3342082 . + . Parent=transcript:Rv2984;Name=Rv2984-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2984-1;rank=1 Chromosome ena CDS 3339854 3342082 . + 0 ID=CDS:Rv2984;Parent=transcript:Rv2984;protein_id=Rv2984 ### -Chromosome ena gene 3342165 3343118 . + . ID=gene:Rv2985;Name=mutT1;biotype=protein_coding;description=Possible hydrolase MutT1;gene_id=Rv2985;logic_name=ena +Chromosome ena gene 3342165 3343118 . + . ID=gene:Rv2985;Name=mutT1;biotype=protein_coding;description=Possible hydrolase MutT1;gene_id=Rv2985;logic_name=ena Chromosome ena mRNA 3342165 3343118 . + . ID=transcript:Rv2985;Parent=gene:Rv2985;Name=mutT1-1;biotype=protein_coding;transcript_id=Rv2985 Chromosome ena exon 3342165 3343118 . + . Parent=transcript:Rv2985;Name=Rv2985-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2985-1;rank=1 Chromosome ena CDS 3342165 3343118 . + 0 ID=CDS:Rv2985;Parent=transcript:Rv2985;protein_id=Rv2985 ### -Chromosome ena gene 3343176 3343820 . - . ID=gene:Rv2986c;Name=hupB;biotype=protein_coding;description=DNA-binding protein HU homolog HupB (histone-like protein) (HLP) (21-kDa laminin-2-binding protein);gene_id=Rv2986c;logic_name=ena +Chromosome ena gene 3343176 3343820 . - . ID=gene:Rv2986c;Name=hupB;biotype=protein_coding;description=DNA-binding protein HU homolog HupB (histone-like protein) (HLP) (21-kDa laminin-2-binding protein);gene_id=Rv2986c;logic_name=ena Chromosome ena mRNA 3343176 3343820 . - . ID=transcript:Rv2986c;Parent=gene:Rv2986c;Name=hupB-1;biotype=protein_coding;transcript_id=Rv2986c Chromosome ena exon 3343176 3343820 . - . Parent=transcript:Rv2986c;Name=Rv2986c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2986c-1;rank=1 Chromosome ena CDS 3343176 3343820 . - 0 ID=CDS:Rv2986c;Parent=transcript:Rv2986c;protein_id=Rv2986c ### -Chromosome ena gene 3344033 3344629 . - . ID=gene:Rv2987c;Name=leuD;biotype=protein_coding;description=Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI);gene_id=Rv2987c;logic_name=ena +Chromosome ena gene 3344033 3344629 . - . ID=gene:Rv2987c;Name=leuD;biotype=protein_coding;description=Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI);gene_id=Rv2987c;logic_name=ena Chromosome ena mRNA 3344033 3344629 . - . ID=transcript:Rv2987c;Parent=gene:Rv2987c;Name=leuD-1;biotype=protein_coding;transcript_id=Rv2987c Chromosome ena exon 3344033 3344629 . - . Parent=transcript:Rv2987c;Name=Rv2987c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2987c-1;rank=1 Chromosome ena CDS 3344033 3344629 . - 0 ID=CDS:Rv2987c;Parent=transcript:Rv2987c;protein_id=Rv2987c ### -Chromosome ena gene 3344654 3346075 . - . ID=gene:Rv2988c;Name=leuC;biotype=protein_coding;description=Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI);gene_id=Rv2988c;logic_name=ena +Chromosome ena gene 3344654 3346075 . - . ID=gene:Rv2988c;Name=leuC;biotype=protein_coding;description=Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI);gene_id=Rv2988c;logic_name=ena Chromosome ena mRNA 3344654 3346075 . - . ID=transcript:Rv2988c;Parent=gene:Rv2988c;Name=leuC-1;biotype=protein_coding;transcript_id=Rv2988c Chromosome ena exon 3344654 3346075 . - . Parent=transcript:Rv2988c;Name=Rv2988c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2988c-1;rank=1 Chromosome ena CDS 3344654 3346075 . - 0 ID=CDS:Rv2988c;Parent=transcript:Rv2988c;protein_id=Rv2988c ### -Chromosome ena gene 3346147 3346848 . + . ID=gene:Rv2989;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2989;logic_name=ena +Chromosome ena gene 3346147 3346848 . + . ID=gene:Rv2989;biotype=protein_coding;description=Probable transcriptional regulatory protein;gene_id=Rv2989;logic_name=ena Chromosome ena mRNA 3346147 3346848 . + . ID=transcript:Rv2989;Parent=gene:Rv2989;biotype=protein_coding;transcript_id=Rv2989 Chromosome ena exon 3346147 3346848 . + . Parent=transcript:Rv2989;Name=Rv2989-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2989-1;rank=1 Chromosome ena CDS 3346147 3346848 . + 0 ID=CDS:Rv2989;Parent=transcript:Rv2989;protein_id=Rv2989 ### -Chromosome ena gene 3346859 3347719 . - . ID=gene:Rv2990c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2990c;logic_name=ena +Chromosome ena gene 3346859 3347719 . - . ID=gene:Rv2990c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2990c;logic_name=ena Chromosome ena mRNA 3346859 3347719 . - . ID=transcript:Rv2990c;Parent=gene:Rv2990c;biotype=protein_coding;transcript_id=Rv2990c Chromosome ena exon 3346859 3347719 . - . Parent=transcript:Rv2990c;Name=Rv2990c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2990c-1;rank=1 Chromosome ena CDS 3346859 3347719 . - 0 ID=CDS:Rv2990c;Parent=transcript:Rv2990c;protein_id=Rv2990c ### -Chromosome ena gene 3347982 3348473 . + . ID=gene:Rv2991;biotype=protein_coding;description=Conserved protein;gene_id=Rv2991;logic_name=ena +Chromosome ena gene 3347982 3348473 . + . ID=gene:Rv2991;biotype=protein_coding;description=Conserved protein;gene_id=Rv2991;logic_name=ena Chromosome ena mRNA 3347982 3348473 . + . ID=transcript:Rv2991;Parent=gene:Rv2991;biotype=protein_coding;transcript_id=Rv2991 Chromosome ena exon 3347982 3348473 . + . Parent=transcript:Rv2991;Name=Rv2991-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2991-1;rank=1 Chromosome ena CDS 3347982 3348473 . + 0 ID=CDS:Rv2991;Parent=transcript:Rv2991;protein_id=Rv2991 @@ -15718,401 +15718,401 @@ Chromosome ena transcript 3348659 3348730 . - . ID=transcript:EBG00000313346;Par Chromosome ena exon 3348659 3348730 . - . Parent=transcript:EBG00000313346;Name=EBG00000313346;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313346;rank=1 ### Chromosome ena_gene biological_region 3348659 3348730 . - . external_name=AL123456.3:gene:complement(3348659..3348730);logic_name=ena_gene -Chromosome ena gene 3348805 3350277 . - . ID=gene:Rv2992c;Name=gltS;biotype=protein_coding;description=Glutamyl-tRNA synthetase GltS (glutamate--tRNA ligase) (glutamyl-tRNA synthase) (GLURS);gene_id=Rv2992c;logic_name=ena +Chromosome ena gene 3348805 3350277 . - . ID=gene:Rv2992c;Name=gltS;biotype=protein_coding;description=Glutamyl-tRNA synthetase GltS (glutamate--tRNA ligase) (glutamyl-tRNA synthase) (GLURS);gene_id=Rv2992c;logic_name=ena Chromosome ena mRNA 3348805 3350277 . - . ID=transcript:Rv2992c;Parent=gene:Rv2992c;Name=gltS-1;biotype=protein_coding;transcript_id=Rv2992c Chromosome ena exon 3348805 3350277 . - . Parent=transcript:Rv2992c;Name=Rv2992c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2992c-1;rank=1 Chromosome ena CDS 3348805 3350277 . - 0 ID=CDS:Rv2992c;Parent=transcript:Rv2992c;protein_id=Rv2992c ### -Chromosome ena gene 3350274 3350993 . - . ID=gene:Rv2993c;biotype=protein_coding;description=Possible 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase);gene_id=Rv2993c;logic_name=ena +Chromosome ena gene 3350274 3350993 . - . ID=gene:Rv2993c;biotype=protein_coding;description=Possible 2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase (HHDD isomerase);gene_id=Rv2993c;logic_name=ena Chromosome ena mRNA 3350274 3350993 . - . ID=transcript:Rv2993c;Parent=gene:Rv2993c;biotype=protein_coding;transcript_id=Rv2993c Chromosome ena exon 3350274 3350993 . - . Parent=transcript:Rv2993c;Name=Rv2993c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2993c-1;rank=1 Chromosome ena CDS 3350274 3350993 . - 0 ID=CDS:Rv2993c;Parent=transcript:Rv2993c;protein_id=Rv2993c ### -Chromosome ena gene 3351269 3352606 . + . ID=gene:Rv2994;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2994;logic_name=ena +Chromosome ena gene 3351269 3352606 . + . ID=gene:Rv2994;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv2994;logic_name=ena Chromosome ena mRNA 3351269 3352606 . + . ID=transcript:Rv2994;Parent=gene:Rv2994;biotype=protein_coding;transcript_id=Rv2994 Chromosome ena exon 3351269 3352606 . + . Parent=transcript:Rv2994;Name=Rv2994-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2994-1;rank=1 Chromosome ena CDS 3351269 3352606 . + 0 ID=CDS:Rv2994;Parent=transcript:Rv2994;protein_id=Rv2994 ### -Chromosome ena gene 3352458 3353468 . - . ID=gene:Rv2995c;Name=leuB;biotype=protein_coding;description=Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH);gene_id=Rv2995c;logic_name=ena +Chromosome ena gene 3352458 3353468 . - . ID=gene:Rv2995c;Name=leuB;biotype=protein_coding;description=Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH);gene_id=Rv2995c;logic_name=ena Chromosome ena mRNA 3352458 3353468 . - . ID=transcript:Rv2995c;Parent=gene:Rv2995c;Name=leuB-1;biotype=protein_coding;transcript_id=Rv2995c Chromosome ena exon 3352458 3353468 . - . Parent=transcript:Rv2995c;Name=Rv2995c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2995c-1;rank=1 Chromosome ena CDS 3352458 3353468 . - 0 ID=CDS:Rv2995c;Parent=transcript:Rv2995c;protein_id=Rv2995c ### -Chromosome ena gene 3353483 3355069 . - . ID=gene:Rv2996c;Name=serA1;biotype=protein_coding;description=Probable D-3-phosphoglycerate dehydrogenase SerA1 (PGDH);gene_id=Rv2996c;logic_name=ena +Chromosome ena gene 3353483 3355069 . - . ID=gene:Rv2996c;Name=serA1;biotype=protein_coding;description=Probable D-3-phosphoglycerate dehydrogenase SerA1 (PGDH);gene_id=Rv2996c;logic_name=ena Chromosome ena mRNA 3353483 3355069 . - . ID=transcript:Rv2996c;Parent=gene:Rv2996c;Name=serA1-1;biotype=protein_coding;transcript_id=Rv2996c Chromosome ena exon 3353483 3355069 . - . Parent=transcript:Rv2996c;Name=Rv2996c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2996c-1;rank=1 Chromosome ena CDS 3353483 3355069 . - 0 ID=CDS:Rv2996c;Parent=transcript:Rv2996c;protein_id=Rv2996c ### -Chromosome ena gene 3355099 3356541 . + . ID=gene:Rv2997;biotype=protein_coding;description=Possible alanine rich dehydrogenase;gene_id=Rv2997;logic_name=ena +Chromosome ena gene 3355099 3356541 . + . ID=gene:Rv2997;biotype=protein_coding;description=Possible alanine rich dehydrogenase;gene_id=Rv2997;logic_name=ena Chromosome ena mRNA 3355099 3356541 . + . ID=transcript:Rv2997;Parent=gene:Rv2997;biotype=protein_coding;transcript_id=Rv2997 Chromosome ena exon 3355099 3356541 . + . Parent=transcript:Rv2997;Name=Rv2997-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2997-1;rank=1 Chromosome ena CDS 3355099 3356541 . + 0 ID=CDS:Rv2997;Parent=transcript:Rv2997;protein_id=Rv2997 ### -Chromosome ena gene 3356815 3357276 . + . ID=gene:Rv2998;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2998;logic_name=ena +Chromosome ena gene 3356815 3357276 . + . ID=gene:Rv2998;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv2998;logic_name=ena Chromosome ena mRNA 3356815 3357276 . + . ID=transcript:Rv2998;Parent=gene:Rv2998;biotype=protein_coding;transcript_id=Rv2998 Chromosome ena exon 3356815 3357276 . + . Parent=transcript:Rv2998;Name=Rv2998-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2998-1;rank=1 Chromosome ena CDS 3356815 3357276 . + 0 ID=CDS:Rv2998;Parent=transcript:Rv2998;protein_id=Rv2998 ### -Chromosome ena gene 3357225 3357428 . - . ID=gene:Rv2998A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2998A;logic_name=ena +Chromosome ena gene 3357225 3357428 . - . ID=gene:Rv2998A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv2998A;logic_name=ena Chromosome ena mRNA 3357225 3357428 . - . ID=transcript:Rv2998A;Parent=gene:Rv2998A;biotype=protein_coding;transcript_id=Rv2998A Chromosome ena exon 3357225 3357428 . - . Parent=transcript:Rv2998A;Name=Rv2998A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2998A-1;rank=1 Chromosome ena CDS 3357225 3357428 . - 0 ID=CDS:Rv2998A;Parent=transcript:Rv2998A;protein_id=Rv2998A ### -Chromosome ena gene 3357602 3358567 . + . ID=gene:Rv2999;Name=lppY;biotype=protein_coding;description=Probable conserved lipoprotein LppY;gene_id=Rv2999;logic_name=ena +Chromosome ena gene 3357602 3358567 . + . ID=gene:Rv2999;Name=lppY;biotype=protein_coding;description=Probable conserved lipoprotein LppY;gene_id=Rv2999;logic_name=ena Chromosome ena mRNA 3357602 3358567 . + . ID=transcript:Rv2999;Parent=gene:Rv2999;Name=lppY-1;biotype=protein_coding;transcript_id=Rv2999 Chromosome ena exon 3357602 3358567 . + . Parent=transcript:Rv2999;Name=Rv2999-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv2999-1;rank=1 Chromosome ena CDS 3357602 3358567 . + 0 ID=CDS:Rv2999;Parent=transcript:Rv2999;protein_id=Rv2999 ### -Chromosome ena gene 3358612 3359271 . + . ID=gene:Rv3000;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3000;logic_name=ena +Chromosome ena gene 3358612 3359271 . + . ID=gene:Rv3000;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3000;logic_name=ena Chromosome ena mRNA 3358612 3359271 . + . ID=transcript:Rv3000;Parent=gene:Rv3000;biotype=protein_coding;transcript_id=Rv3000 Chromosome ena exon 3358612 3359271 . + . Parent=transcript:Rv3000;Name=Rv3000-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3000-1;rank=1 Chromosome ena CDS 3358612 3359271 . + 0 ID=CDS:Rv3000;Parent=transcript:Rv3000;protein_id=Rv3000 ### -Chromosome ena gene 3359585 3360586 . - . ID=gene:Rv3001c;Name=ilvC;biotype=protein_coding;description=Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase);gene_id=Rv3001c;logic_name=ena +Chromosome ena gene 3359585 3360586 . - . ID=gene:Rv3001c;Name=ilvC;biotype=protein_coding;description=Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase);gene_id=Rv3001c;logic_name=ena Chromosome ena mRNA 3359585 3360586 . - . ID=transcript:Rv3001c;Parent=gene:Rv3001c;Name=ilvC-1;biotype=protein_coding;transcript_id=Rv3001c Chromosome ena exon 3359585 3360586 . - . Parent=transcript:Rv3001c;Name=Rv3001c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3001c-1;rank=1 Chromosome ena CDS 3359585 3360586 . - 0 ID=CDS:Rv3001c;Parent=transcript:Rv3001c;protein_id=Rv3001c ### -Chromosome ena gene 3360624 3361130 . - . ID=gene:Rv3002c;Name=ilvN;biotype=protein_coding;description=Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS);gene_id=Rv3002c;logic_name=ena +Chromosome ena gene 3360624 3361130 . - . ID=gene:Rv3002c;Name=ilvN;biotype=protein_coding;description=Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS);gene_id=Rv3002c;logic_name=ena Chromosome ena mRNA 3360624 3361130 . - . ID=transcript:Rv3002c;Parent=gene:Rv3002c;Name=ilvN-1;biotype=protein_coding;transcript_id=Rv3002c Chromosome ena exon 3360624 3361130 . - . Parent=transcript:Rv3002c;Name=Rv3002c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3002c-1;rank=1 Chromosome ena CDS 3360624 3361130 . - 0 ID=CDS:Rv3002c;Parent=transcript:Rv3002c;protein_id=Rv3002c ### -Chromosome ena gene 3361130 3362986 . - . ID=gene:Rv3003c;Name=ilvB1;biotype=protein_coding;description=Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase);gene_id=Rv3003c;logic_name=ena +Chromosome ena gene 3361130 3362986 . - . ID=gene:Rv3003c;Name=ilvB1;biotype=protein_coding;description=Acetolactate synthase (large subunit) IlvB1 (acetohydroxy-acid synthase);gene_id=Rv3003c;logic_name=ena Chromosome ena mRNA 3361130 3362986 . - . ID=transcript:Rv3003c;Parent=gene:Rv3003c;Name=ilvB1-1;biotype=protein_coding;transcript_id=Rv3003c Chromosome ena exon 3361130 3362986 . - . Parent=transcript:Rv3003c;Name=Rv3003c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3003c-1;rank=1 Chromosome ena CDS 3361130 3362986 . - 0 ID=CDS:Rv3003c;Parent=transcript:Rv3003c;protein_id=Rv3003c ### -Chromosome ena gene 3363348 3363686 . + . ID=gene:Rv3004;Name=cfp6;biotype=protein_coding;description=Low molecular weight protein antigen 6 (CFP-6);gene_id=Rv3004;logic_name=ena +Chromosome ena gene 3363348 3363686 . + . ID=gene:Rv3004;Name=cfp6;biotype=protein_coding;description=Low molecular weight protein antigen 6 (CFP-6);gene_id=Rv3004;logic_name=ena Chromosome ena mRNA 3363348 3363686 . + . ID=transcript:Rv3004;Parent=gene:Rv3004;Name=cfp6-1;biotype=protein_coding;transcript_id=Rv3004 Chromosome ena exon 3363348 3363686 . + . Parent=transcript:Rv3004;Name=Rv3004-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3004-1;rank=1 Chromosome ena CDS 3363348 3363686 . + 0 ID=CDS:Rv3004;Parent=transcript:Rv3004;protein_id=Rv3004 ### -Chromosome ena gene 3363693 3364532 . - . ID=gene:Rv3005c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3005c;logic_name=ena +Chromosome ena gene 3363693 3364532 . - . ID=gene:Rv3005c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3005c;logic_name=ena Chromosome ena mRNA 3363693 3364532 . - . ID=transcript:Rv3005c;Parent=gene:Rv3005c;biotype=protein_coding;transcript_id=Rv3005c Chromosome ena exon 3363693 3364532 . - . Parent=transcript:Rv3005c;Name=Rv3005c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3005c-1;rank=1 Chromosome ena CDS 3363693 3364532 . - 0 ID=CDS:Rv3005c;Parent=transcript:Rv3005c;protein_id=Rv3005c ### -Chromosome ena gene 3364709 3365830 . + . ID=gene:Rv3006;Name=lppZ;biotype=protein_coding;description=Probable conserved lipoprotein LppZ;gene_id=Rv3006;logic_name=ena +Chromosome ena gene 3364709 3365830 . + . ID=gene:Rv3006;Name=lppZ;biotype=protein_coding;description=Probable conserved lipoprotein LppZ;gene_id=Rv3006;logic_name=ena Chromosome ena mRNA 3364709 3365830 . + . ID=transcript:Rv3006;Parent=gene:Rv3006;Name=lppZ-1;biotype=protein_coding;transcript_id=Rv3006 Chromosome ena exon 3364709 3365830 . + . Parent=transcript:Rv3006;Name=Rv3006-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3006-1;rank=1 Chromosome ena CDS 3364709 3365830 . + 0 ID=CDS:Rv3006;Parent=transcript:Rv3006;protein_id=Rv3006 ### -Chromosome ena gene 3365836 3366450 . - . ID=gene:Rv3007c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3007c;logic_name=ena +Chromosome ena gene 3365836 3366450 . - . ID=gene:Rv3007c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3007c;logic_name=ena Chromosome ena mRNA 3365836 3366450 . - . ID=transcript:Rv3007c;Parent=gene:Rv3007c;biotype=protein_coding;transcript_id=Rv3007c Chromosome ena exon 3365836 3366450 . - . Parent=transcript:Rv3007c;Name=Rv3007c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3007c-1;rank=1 Chromosome ena CDS 3365836 3366450 . - 0 ID=CDS:Rv3007c;Parent=transcript:Rv3007c;protein_id=Rv3007c ### -Chromosome ena gene 3366644 3367267 . + . ID=gene:Rv3008;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3008;logic_name=ena +Chromosome ena gene 3366644 3367267 . + . ID=gene:Rv3008;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3008;logic_name=ena Chromosome ena mRNA 3366644 3367267 . + . ID=transcript:Rv3008;Parent=gene:Rv3008;biotype=protein_coding;transcript_id=Rv3008 Chromosome ena exon 3366644 3367267 . + . Parent=transcript:Rv3008;Name=Rv3008-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3008-1;rank=1 Chromosome ena CDS 3366644 3367267 . + 0 ID=CDS:Rv3008;Parent=transcript:Rv3008;protein_id=Rv3008 ### -Chromosome ena gene 3367264 3368793 . - . ID=gene:Rv3009c;Name=gatB;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit B) GatB (Glu-ADT subunit B);gene_id=Rv3009c;logic_name=ena +Chromosome ena gene 3367264 3368793 . - . ID=gene:Rv3009c;Name=gatB;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit B) GatB (Glu-ADT subunit B);gene_id=Rv3009c;logic_name=ena Chromosome ena mRNA 3367264 3368793 . - . ID=transcript:Rv3009c;Parent=gene:Rv3009c;Name=gatB-1;biotype=protein_coding;transcript_id=Rv3009c Chromosome ena exon 3367264 3368793 . - . Parent=transcript:Rv3009c;Name=Rv3009c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3009c-1;rank=1 Chromosome ena CDS 3367264 3368793 . - 0 ID=CDS:Rv3009c;Parent=transcript:Rv3009c;protein_id=Rv3009c ### -Chromosome ena gene 3368823 3369854 . - . ID=gene:Rv3010c;Name=pfkA;biotype=protein_coding;description=Probable 6-phosphofructokinase PfkA (phosphohexokinase) (phosphofructokinase);gene_id=Rv3010c;logic_name=ena +Chromosome ena gene 3368823 3369854 . - . ID=gene:Rv3010c;Name=pfkA;biotype=protein_coding;description=Probable 6-phosphofructokinase PfkA (phosphohexokinase) (phosphofructokinase);gene_id=Rv3010c;logic_name=ena Chromosome ena mRNA 3368823 3369854 . - . ID=transcript:Rv3010c;Parent=gene:Rv3010c;Name=pfkA-1;biotype=protein_coding;transcript_id=Rv3010c Chromosome ena exon 3368823 3369854 . - . Parent=transcript:Rv3010c;Name=Rv3010c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3010c-1;rank=1 Chromosome ena CDS 3368823 3369854 . - 0 ID=CDS:Rv3010c;Parent=transcript:Rv3010c;protein_id=Rv3010c ### -Chromosome ena gene 3369950 3371434 . - . ID=gene:Rv3011c;Name=gatA;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit A) GatA (Glu-ADT subunit A);gene_id=Rv3011c;logic_name=ena +Chromosome ena gene 3369950 3371434 . - . ID=gene:Rv3011c;Name=gatA;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit A) GatA (Glu-ADT subunit A);gene_id=Rv3011c;logic_name=ena Chromosome ena mRNA 3369950 3371434 . - . ID=transcript:Rv3011c;Parent=gene:Rv3011c;Name=gatA-1;biotype=protein_coding;transcript_id=Rv3011c Chromosome ena exon 3369950 3371434 . - . Parent=transcript:Rv3011c;Name=Rv3011c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3011c-1;rank=1 Chromosome ena CDS 3369950 3371434 . - 0 ID=CDS:Rv3011c;Parent=transcript:Rv3011c;protein_id=Rv3011c ### -Chromosome ena gene 3371431 3371730 . - . ID=gene:Rv3012c;Name=gatC;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit C) GatC (Glu-ADT subunit C);gene_id=Rv3012c;logic_name=ena +Chromosome ena gene 3371431 3371730 . - . ID=gene:Rv3012c;Name=gatC;biotype=protein_coding;description=Probable glutamyl-tRNA(GLN) amidotransferase (subunit C) GatC (Glu-ADT subunit C);gene_id=Rv3012c;logic_name=ena Chromosome ena mRNA 3371431 3371730 . - . ID=transcript:Rv3012c;Parent=gene:Rv3012c;Name=gatC-1;biotype=protein_coding;transcript_id=Rv3012c Chromosome ena exon 3371431 3371730 . - . Parent=transcript:Rv3012c;Name=Rv3012c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3012c-1;rank=1 Chromosome ena CDS 3371431 3371730 . - 0 ID=CDS:Rv3012c;Parent=transcript:Rv3012c;protein_id=Rv3012c ### -Chromosome ena gene 3371815 3372471 . + . ID=gene:Rv3013;biotype=protein_coding;description=Conserved protein;gene_id=Rv3013;logic_name=ena +Chromosome ena gene 3371815 3372471 . + . ID=gene:Rv3013;biotype=protein_coding;description=Conserved protein;gene_id=Rv3013;logic_name=ena Chromosome ena mRNA 3371815 3372471 . + . ID=transcript:Rv3013;Parent=gene:Rv3013;biotype=protein_coding;transcript_id=Rv3013 Chromosome ena exon 3371815 3372471 . + . Parent=transcript:Rv3013;Name=Rv3013-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3013-1;rank=1 Chromosome ena CDS 3371815 3372471 . + 0 ID=CDS:Rv3013;Parent=transcript:Rv3013;protein_id=Rv3013 ### -Chromosome ena gene 3372545 3374620 . - . ID=gene:Rv3014c;Name=ligA;biotype=protein_coding;description=DNA ligase [NAD dependent] LigA (polydeoxyribonucleotide synthase [NAD+]);gene_id=Rv3014c;logic_name=ena +Chromosome ena gene 3372545 3374620 . - . ID=gene:Rv3014c;Name=ligA;biotype=protein_coding;description=DNA ligase [NAD dependent] LigA (polydeoxyribonucleotide synthase [NAD+]);gene_id=Rv3014c;logic_name=ena Chromosome ena mRNA 3372545 3374620 . - . ID=transcript:Rv3014c;Parent=gene:Rv3014c;Name=ligA-1;biotype=protein_coding;transcript_id=Rv3014c Chromosome ena exon 3372545 3374620 . - . Parent=transcript:Rv3014c;Name=Rv3014c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3014c-1;rank=1 Chromosome ena CDS 3372545 3374620 . - 0 ID=CDS:Rv3014c;Parent=transcript:Rv3014c;protein_id=Rv3014c ### -Chromosome ena gene 3374651 3375664 . - . ID=gene:Rv3015c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3015c;logic_name=ena +Chromosome ena gene 3374651 3375664 . - . ID=gene:Rv3015c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3015c;logic_name=ena Chromosome ena mRNA 3374651 3375664 . - . ID=transcript:Rv3015c;Parent=gene:Rv3015c;biotype=protein_coding;transcript_id=Rv3015c Chromosome ena exon 3374651 3375664 . - . Parent=transcript:Rv3015c;Name=Rv3015c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3015c-1;rank=1 Chromosome ena CDS 3374651 3375664 . - 0 ID=CDS:Rv3015c;Parent=transcript:Rv3015c;protein_id=Rv3015c ### -Chromosome ena gene 3375758 3376387 . + . ID=gene:Rv3016;Name=lpqA;biotype=protein_coding;description=Probable lipoprotein LpqA;gene_id=Rv3016;logic_name=ena +Chromosome ena gene 3375758 3376387 . + . ID=gene:Rv3016;Name=lpqA;biotype=protein_coding;description=Probable lipoprotein LpqA;gene_id=Rv3016;logic_name=ena Chromosome ena mRNA 3375758 3376387 . + . ID=transcript:Rv3016;Parent=gene:Rv3016;Name=lpqA-1;biotype=protein_coding;transcript_id=Rv3016 Chromosome ena exon 3375758 3376387 . + . Parent=transcript:Rv3016;Name=Rv3016-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3016-1;rank=1 Chromosome ena CDS 3375758 3376387 . + 0 ID=CDS:Rv3016;Parent=transcript:Rv3016;protein_id=Rv3016 ### -Chromosome ena gene 3376490 3376852 . - . ID=gene:Rv3017c;Name=esxQ;biotype=protein_coding;description=ESAT-6 like protein EsxQ (TB12.9) (ESAT-6 like protein 8);gene_id=Rv3017c;logic_name=ena +Chromosome ena gene 3376490 3376852 . - . ID=gene:Rv3017c;Name=esxQ;biotype=protein_coding;description=ESAT-6 like protein EsxQ (TB12.9) (ESAT-6 like protein 8);gene_id=Rv3017c;logic_name=ena Chromosome ena mRNA 3376490 3376852 . - . ID=transcript:Rv3017c;Parent=gene:Rv3017c;Name=esxQ-1;biotype=protein_coding;transcript_id=Rv3017c Chromosome ena exon 3376490 3376852 . - . Parent=transcript:Rv3017c;Name=Rv3017c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3017c-1;rank=1 Chromosome ena CDS 3376490 3376852 . - 0 ID=CDS:Rv3017c;Parent=transcript:Rv3017c;protein_id=Rv3017c ### -Chromosome ena gene 3376939 3378243 . - . ID=gene:Rv3018c;Name=PPE46;biotype=protein_coding;description=PPE family protein PPE46;gene_id=Rv3018c;logic_name=ena +Chromosome ena gene 3376939 3378243 . - . ID=gene:Rv3018c;Name=PPE46;biotype=protein_coding;description=PPE family protein PPE46;gene_id=Rv3018c;logic_name=ena Chromosome ena mRNA 3376939 3378243 . - . ID=transcript:Rv3018c;Parent=gene:Rv3018c;Name=PPE46-1;biotype=protein_coding;transcript_id=Rv3018c Chromosome ena exon 3376939 3378243 . - . Parent=transcript:Rv3018c;Name=Rv3018c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3018c-1;rank=1 Chromosome ena CDS 3376939 3378243 . - 0 ID=CDS:Rv3018c;Parent=transcript:Rv3018c;protein_id=Rv3018c ### -Chromosome ena gene 3378329 3378415 . - . ID=gene:Rv3018A;Name=PE27A;biotype=protein_coding;description=PE family protein PE27A;gene_id=Rv3018A;logic_name=ena +Chromosome ena gene 3378329 3378415 . - . ID=gene:Rv3018A;Name=PE27A;biotype=protein_coding;description=PE family protein PE27A;gene_id=Rv3018A;logic_name=ena Chromosome ena mRNA 3378329 3378415 . - . ID=transcript:Rv3018A;Parent=gene:Rv3018A;Name=PE27A-1;biotype=protein_coding;transcript_id=Rv3018A Chromosome ena exon 3378329 3378415 . - . Parent=transcript:Rv3018A;Name=Rv3018A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3018A-1;rank=1 Chromosome ena CDS 3378329 3378415 . - 0 ID=CDS:Rv3018A;Parent=transcript:Rv3018A;protein_id=Rv3018A ### -Chromosome ena gene 3378711 3379001 . - . ID=gene:Rv3019c;Name=esxR;biotype=protein_coding;description=Secreted ESAT-6 like protein EsxR (TB10.3) (ESAT-6 like protein 9);gene_id=Rv3019c;logic_name=ena +Chromosome ena gene 3378711 3379001 . - . ID=gene:Rv3019c;Name=esxR;biotype=protein_coding;description=Secreted ESAT-6 like protein EsxR (TB10.3) (ESAT-6 like protein 9);gene_id=Rv3019c;logic_name=ena Chromosome ena mRNA 3378711 3379001 . - . ID=transcript:Rv3019c;Parent=gene:Rv3019c;Name=esxR-1;biotype=protein_coding;transcript_id=Rv3019c Chromosome ena exon 3378711 3379001 . - . Parent=transcript:Rv3019c;Name=Rv3019c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3019c-1;rank=1 Chromosome ena CDS 3378711 3379001 . - 0 ID=CDS:Rv3019c;Parent=transcript:Rv3019c;protein_id=Rv3019c ### -Chromosome ena gene 3379036 3379329 . - . ID=gene:Rv3020c;Name=esxS;biotype=protein_coding;description=ESAT-6 like protein EsxS;gene_id=Rv3020c;logic_name=ena +Chromosome ena gene 3379036 3379329 . - . ID=gene:Rv3020c;Name=esxS;biotype=protein_coding;description=ESAT-6 like protein EsxS;gene_id=Rv3020c;logic_name=ena Chromosome ena mRNA 3379036 3379329 . - . ID=transcript:Rv3020c;Parent=gene:Rv3020c;Name=esxS-1;biotype=protein_coding;transcript_id=Rv3020c Chromosome ena exon 3379036 3379329 . - . Parent=transcript:Rv3020c;Name=Rv3020c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3020c-1;rank=1 Chromosome ena CDS 3379036 3379329 . - 0 ID=CDS:Rv3020c;Parent=transcript:Rv3020c;protein_id=Rv3020c ### -Chromosome ena pseudogene 3379376 3380452 . - . ID=gene:Rv3021c;Name=PPE47;biotype=pseudogene;description=PPE family protein PPE47;gene_id=Rv3021c;logic_name=ena +Chromosome ena pseudogene 3379376 3380452 . - . ID=gene:Rv3021c;Name=PPE47;biotype=pseudogene;description=PPE family protein PPE47;gene_id=Rv3021c;logic_name=ena Chromosome ena pseudogene 3379376 3380452 . - . ID=transcript:Rv3021c;Parent=gene:Rv3021c;Name=PPE47-1;biotype=pseudogene;transcript_id=Rv3021c Chromosome ena exon 3379376 3380452 . - . Parent=transcript:Rv3021c;Name=Rv3021c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3021c-1;rank=1 ### -Chromosome ena pseudogene 3380440 3380682 . - . ID=gene:Rv3022c;Name=PPE48;biotype=pseudogene;description=PPE family protein PPE48;gene_id=Rv3022c;logic_name=ena +Chromosome ena pseudogene 3380440 3380682 . - . ID=gene:Rv3022c;Name=PPE48;biotype=pseudogene;description=PPE family protein PPE48;gene_id=Rv3022c;logic_name=ena Chromosome ena pseudogene 3380440 3380682 . - . ID=transcript:Rv3022c;Parent=gene:Rv3022c;Name=PPE48-1;biotype=pseudogene;transcript_id=Rv3022c Chromosome ena exon 3380440 3380682 . - . Parent=transcript:Rv3022c;Name=Rv3022c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3022c-1;rank=1 ### -Chromosome ena gene 3380679 3380993 . - . ID=gene:Rv3022A;Name=PE29;biotype=protein_coding;description=PE family protein PE29;gene_id=Rv3022A;logic_name=ena +Chromosome ena gene 3380679 3380993 . - . ID=gene:Rv3022A;Name=PE29;biotype=protein_coding;description=PE family protein PE29;gene_id=Rv3022A;logic_name=ena Chromosome ena mRNA 3380679 3380993 . - . ID=transcript:Rv3022A;Parent=gene:Rv3022A;Name=PE29-1;biotype=protein_coding;transcript_id=Rv3022A Chromosome ena exon 3380679 3380993 . - . Parent=transcript:Rv3022A;Name=Rv3022A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3022A-1;rank=1 Chromosome ena CDS 3380679 3380993 . - 0 ID=CDS:Rv3022A;Parent=transcript:Rv3022A;protein_id=Rv3022A ### -Chromosome ena_mobile_element biological_region 3381351 3382674 . + . external_name=IS1081-5%2C len: 1324 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element -Chromosome ena gene 3381375 3382622 . - . ID=gene:Rv3023c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3023c;logic_name=ena +Chromosome ena_mobile_element biological_region 3381351 3382674 . + . external_name=IS1081-5%2C len: 1324 nt. Insertion sequence IS1081.;logic_name=ena_mobile_element +Chromosome ena gene 3381375 3382622 . - . ID=gene:Rv3023c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3023c;logic_name=ena Chromosome ena mRNA 3381375 3382622 . - . ID=transcript:Rv3023c;Parent=gene:Rv3023c;biotype=protein_coding;transcript_id=Rv3023c Chromosome ena exon 3381375 3382622 . - . Parent=transcript:Rv3023c;Name=Rv3023c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3023c-1;rank=1 Chromosome ena CDS 3381375 3382622 . - 0 ID=CDS:Rv3023c;Parent=transcript:Rv3023c;protein_id=Rv3023c ### -Chromosome ena gene 3382785 3383888 . - . ID=gene:Rv3024c;Name=trmU;biotype=protein_coding;description=Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU;gene_id=Rv3024c;logic_name=ena +Chromosome ena gene 3382785 3383888 . - . ID=gene:Rv3024c;Name=trmU;biotype=protein_coding;description=Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU;gene_id=Rv3024c;logic_name=ena Chromosome ena mRNA 3382785 3383888 . - . ID=transcript:Rv3024c;Parent=gene:Rv3024c;Name=trmU-1;biotype=protein_coding;transcript_id=Rv3024c Chromosome ena exon 3382785 3383888 . - . Parent=transcript:Rv3024c;Name=Rv3024c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3024c-1;rank=1 Chromosome ena CDS 3382785 3383888 . - 0 ID=CDS:Rv3024c;Parent=transcript:Rv3024c;protein_id=Rv3024c ### -Chromosome ena gene 3383885 3385066 . - . ID=gene:Rv3025c;Name=iscS;biotype=protein_coding;description=Cysteine desulfurase IscS (NIFS protein homolog) (nitrogenase metalloclusters biosynthesis protein NIFS);gene_id=Rv3025c;logic_name=ena +Chromosome ena gene 3383885 3385066 . - . ID=gene:Rv3025c;Name=iscS;biotype=protein_coding;description=Cysteine desulfurase IscS (NIFS protein homolog) (nitrogenase metalloclusters biosynthesis protein NIFS);gene_id=Rv3025c;logic_name=ena Chromosome ena mRNA 3383885 3385066 . - . ID=transcript:Rv3025c;Parent=gene:Rv3025c;Name=iscS-1;biotype=protein_coding;transcript_id=Rv3025c Chromosome ena exon 3383885 3385066 . - . Parent=transcript:Rv3025c;Name=Rv3025c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3025c-1;rank=1 Chromosome ena CDS 3383885 3385066 . - 0 ID=CDS:Rv3025c;Parent=transcript:Rv3025c;protein_id=Rv3025c ### -Chromosome ena gene 3385163 3386077 . - . ID=gene:Rv3026c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3026c;logic_name=ena +Chromosome ena gene 3385163 3386077 . - . ID=gene:Rv3026c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3026c;logic_name=ena Chromosome ena mRNA 3385163 3386077 . - . ID=transcript:Rv3026c;Parent=gene:Rv3026c;biotype=protein_coding;transcript_id=Rv3026c Chromosome ena exon 3385163 3386077 . - . Parent=transcript:Rv3026c;Name=Rv3026c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3026c-1;rank=1 Chromosome ena CDS 3385163 3386077 . - 0 ID=CDS:Rv3026c;Parent=transcript:Rv3026c;protein_id=Rv3026c ### -Chromosome ena gene 3386074 3386919 . - . ID=gene:Rv3027c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv3027c;logic_name=ena +Chromosome ena gene 3386074 3386919 . - . ID=gene:Rv3027c;biotype=protein_coding;description=GCN5-related N-acetyltransferase;gene_id=Rv3027c;logic_name=ena Chromosome ena mRNA 3386074 3386919 . - . ID=transcript:Rv3027c;Parent=gene:Rv3027c;biotype=protein_coding;transcript_id=Rv3027c Chromosome ena exon 3386074 3386919 . - . Parent=transcript:Rv3027c;Name=Rv3027c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3027c-1;rank=1 Chromosome ena CDS 3386074 3386919 . - 0 ID=CDS:Rv3027c;Parent=transcript:Rv3027c;protein_id=Rv3027c ### -Chromosome ena gene 3387075 3388031 . - . ID=gene:Rv3028c;Name=fixB;biotype=protein_coding;description=Probable electron transfer flavoprotein (alpha-subunit) FixB (alpha-ETF) (electron transfer flavoprotein large subunit) (ETFLS);gene_id=Rv3028c;logic_name=ena +Chromosome ena gene 3387075 3388031 . - . ID=gene:Rv3028c;Name=fixB;biotype=protein_coding;description=Probable electron transfer flavoprotein (alpha-subunit) FixB (alpha-ETF) (electron transfer flavoprotein large subunit) (ETFLS);gene_id=Rv3028c;logic_name=ena Chromosome ena mRNA 3387075 3388031 . - . ID=transcript:Rv3028c;Parent=gene:Rv3028c;Name=fixB-1;biotype=protein_coding;transcript_id=Rv3028c Chromosome ena exon 3387075 3388031 . - . Parent=transcript:Rv3028c;Name=Rv3028c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3028c-1;rank=1 Chromosome ena CDS 3387075 3388031 . - 0 ID=CDS:Rv3028c;Parent=transcript:Rv3028c;protein_id=Rv3028c ### -Chromosome ena gene 3388070 3388870 . - . ID=gene:Rv3029c;Name=fixA;biotype=protein_coding;description=Probable electron transfer flavoprotein (beta-subunit) FixA (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS);gene_id=Rv3029c;logic_name=ena +Chromosome ena gene 3388070 3388870 . - . ID=gene:Rv3029c;Name=fixA;biotype=protein_coding;description=Probable electron transfer flavoprotein (beta-subunit) FixA (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS);gene_id=Rv3029c;logic_name=ena Chromosome ena mRNA 3388070 3388870 . - . ID=transcript:Rv3029c;Parent=gene:Rv3029c;Name=fixA-1;biotype=protein_coding;transcript_id=Rv3029c Chromosome ena exon 3388070 3388870 . - . Parent=transcript:Rv3029c;Name=Rv3029c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3029c-1;rank=1 Chromosome ena CDS 3388070 3388870 . - 0 ID=CDS:Rv3029c;Parent=transcript:Rv3029c;protein_id=Rv3029c ### -Chromosome ena gene 3389101 3389925 . + . ID=gene:Rv3030;biotype=protein_coding;description=Conserved protein;gene_id=Rv3030;logic_name=ena +Chromosome ena gene 3389101 3389925 . + . ID=gene:Rv3030;biotype=protein_coding;description=Conserved protein;gene_id=Rv3030;logic_name=ena Chromosome ena mRNA 3389101 3389925 . + . ID=transcript:Rv3030;Parent=gene:Rv3030;biotype=protein_coding;transcript_id=Rv3030 Chromosome ena exon 3389101 3389925 . + . Parent=transcript:Rv3030;Name=Rv3030-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3030-1;rank=1 Chromosome ena CDS 3389101 3389925 . + 0 ID=CDS:Rv3030;Parent=transcript:Rv3030;protein_id=Rv3030 ### -Chromosome ena gene 3389922 3391502 . + . ID=gene:Rv3031;biotype=protein_coding;description=Conserved protein;gene_id=Rv3031;logic_name=ena +Chromosome ena gene 3389922 3391502 . + . ID=gene:Rv3031;biotype=protein_coding;description=Conserved protein;gene_id=Rv3031;logic_name=ena Chromosome ena mRNA 3389922 3391502 . + . ID=transcript:Rv3031;Parent=gene:Rv3031;biotype=protein_coding;transcript_id=Rv3031 Chromosome ena exon 3389922 3391502 . + . Parent=transcript:Rv3031;Name=Rv3031-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3031-1;rank=1 Chromosome ena CDS 3389922 3391502 . + 0 ID=CDS:Rv3031;Parent=transcript:Rv3031;protein_id=Rv3031 ### -Chromosome ena gene 3391534 3392778 . + . ID=gene:Rv3032;biotype=protein_coding;description=Alpha (1->4) glucosyltransferase;gene_id=Rv3032;logic_name=ena +Chromosome ena gene 3391534 3392778 . + . ID=gene:Rv3032;biotype=protein_coding;description=Alpha (1->4) glucosyltransferase;gene_id=Rv3032;logic_name=ena Chromosome ena mRNA 3391534 3392778 . + . ID=transcript:Rv3032;Parent=gene:Rv3032;biotype=protein_coding;transcript_id=Rv3032 Chromosome ena exon 3391534 3392778 . + . Parent=transcript:Rv3032;Name=Rv3032-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3032-1;rank=1 Chromosome ena CDS 3391534 3392778 . + 0 ID=CDS:Rv3032;Parent=transcript:Rv3032;protein_id=Rv3032 ### -Chromosome ena gene 3392812 3393201 . + . ID=gene:Rv3032A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3032A;logic_name=ena +Chromosome ena gene 3392812 3393201 . + . ID=gene:Rv3032A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3032A;logic_name=ena Chromosome ena mRNA 3392812 3393201 . + . ID=transcript:Rv3032A;Parent=gene:Rv3032A;biotype=protein_coding;transcript_id=Rv3032A Chromosome ena exon 3392812 3393201 . + . Parent=transcript:Rv3032A;Name=Rv3032A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3032A-1;rank=1 Chromosome ena CDS 3392812 3393201 . + 0 ID=CDS:Rv3032A;Parent=transcript:Rv3032A;protein_id=Rv3032A ### -Chromosome ena gene 3393380 3393928 . + . ID=gene:Rv3033;biotype=protein_coding;description=Unknown protein;gene_id=Rv3033;logic_name=ena +Chromosome ena gene 3393380 3393928 . + . ID=gene:Rv3033;biotype=protein_coding;description=Unknown protein;gene_id=Rv3033;logic_name=ena Chromosome ena mRNA 3393380 3393928 . + . ID=transcript:Rv3033;Parent=gene:Rv3033;biotype=protein_coding;transcript_id=Rv3033 Chromosome ena exon 3393380 3393928 . + . Parent=transcript:Rv3033;Name=Rv3033-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3033-1;rank=1 Chromosome ena CDS 3393380 3393928 . + 0 ID=CDS:Rv3033;Parent=transcript:Rv3033;protein_id=Rv3033 ### -Chromosome ena gene 3394019 3394921 . - . ID=gene:Rv3034c;biotype=protein_coding;description=Possible transferase;gene_id=Rv3034c;logic_name=ena +Chromosome ena gene 3394019 3394921 . - . ID=gene:Rv3034c;biotype=protein_coding;description=Possible transferase;gene_id=Rv3034c;logic_name=ena Chromosome ena mRNA 3394019 3394921 . - . ID=transcript:Rv3034c;Parent=gene:Rv3034c;biotype=protein_coding;transcript_id=Rv3034c Chromosome ena exon 3394019 3394921 . - . Parent=transcript:Rv3034c;Name=Rv3034c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3034c-1;rank=1 Chromosome ena CDS 3394019 3394921 . - 0 ID=CDS:Rv3034c;Parent=transcript:Rv3034c;protein_id=Rv3034c ### -Chromosome ena gene 3395379 3396461 . + . ID=gene:Rv3035;biotype=protein_coding;description=Conserved protein;gene_id=Rv3035;logic_name=ena +Chromosome ena gene 3395379 3396461 . + . ID=gene:Rv3035;biotype=protein_coding;description=Conserved protein;gene_id=Rv3035;logic_name=ena Chromosome ena mRNA 3395379 3396461 . + . ID=transcript:Rv3035;Parent=gene:Rv3035;biotype=protein_coding;transcript_id=Rv3035 Chromosome ena exon 3395379 3396461 . + . Parent=transcript:Rv3035;Name=Rv3035-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3035-1;rank=1 Chromosome ena CDS 3395379 3396461 . + 0 ID=CDS:Rv3035;Parent=transcript:Rv3035;protein_id=Rv3035 ### -Chromosome ena gene 3396458 3397141 . - . ID=gene:Rv3036c;Name=TB22.2;biotype=protein_coding;description=Probable conserved secreted protein TB22.2;gene_id=Rv3036c;logic_name=ena +Chromosome ena gene 3396458 3397141 . - . ID=gene:Rv3036c;Name=TB22.2;biotype=protein_coding;description=Probable conserved secreted protein TB22.2;gene_id=Rv3036c;logic_name=ena Chromosome ena mRNA 3396458 3397141 . - . ID=transcript:Rv3036c;Parent=gene:Rv3036c;Name=TB22.2-1;biotype=protein_coding;transcript_id=Rv3036c Chromosome ena exon 3396458 3397141 . - . Parent=transcript:Rv3036c;Name=Rv3036c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3036c-1;rank=1 Chromosome ena CDS 3396458 3397141 . - 0 ID=CDS:Rv3036c;Parent=transcript:Rv3036c;protein_id=Rv3036c ### -Chromosome ena gene 3397214 3398290 . - . ID=gene:Rv3037c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3037c;logic_name=ena +Chromosome ena gene 3397214 3398290 . - . ID=gene:Rv3037c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3037c;logic_name=ena Chromosome ena mRNA 3397214 3398290 . - . ID=transcript:Rv3037c;Parent=gene:Rv3037c;biotype=protein_coding;transcript_id=Rv3037c Chromosome ena exon 3397214 3398290 . - . Parent=transcript:Rv3037c;Name=Rv3037c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3037c-1;rank=1 Chromosome ena CDS 3397214 3398290 . - 0 ID=CDS:Rv3037c;Parent=transcript:Rv3037c;protein_id=Rv3037c ### -Chromosome ena gene 3398425 3399408 . - . ID=gene:Rv3038c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3038c;logic_name=ena +Chromosome ena gene 3398425 3399408 . - . ID=gene:Rv3038c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3038c;logic_name=ena Chromosome ena mRNA 3398425 3399408 . - . ID=transcript:Rv3038c;Parent=gene:Rv3038c;biotype=protein_coding;transcript_id=Rv3038c Chromosome ena exon 3398425 3399408 . - . Parent=transcript:Rv3038c;Name=Rv3038c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3038c-1;rank=1 Chromosome ena CDS 3398425 3399408 . - 0 ID=CDS:Rv3038c;Parent=transcript:Rv3038c;protein_id=Rv3038c ### -Chromosome ena gene 3399419 3400183 . - . ID=gene:Rv3039c;Name=echA17;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA17 (crotonase) (unsatured acyl-CoA hydratase) (enoyl hydrase);gene_id=Rv3039c;logic_name=ena +Chromosome ena gene 3399419 3400183 . - . ID=gene:Rv3039c;Name=echA17;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA17 (crotonase) (unsatured acyl-CoA hydratase) (enoyl hydrase);gene_id=Rv3039c;logic_name=ena Chromosome ena mRNA 3399419 3400183 . - . ID=transcript:Rv3039c;Parent=gene:Rv3039c;Name=echA17-1;biotype=protein_coding;transcript_id=Rv3039c Chromosome ena exon 3399419 3400183 . - . Parent=transcript:Rv3039c;Name=Rv3039c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3039c-1;rank=1 Chromosome ena CDS 3399419 3400183 . - 0 ID=CDS:Rv3039c;Parent=transcript:Rv3039c;protein_id=Rv3039c ### -Chromosome ena gene 3400192 3401058 . - . ID=gene:Rv3040c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3040c;logic_name=ena +Chromosome ena gene 3400192 3401058 . - . ID=gene:Rv3040c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3040c;logic_name=ena Chromosome ena mRNA 3400192 3401058 . - . ID=transcript:Rv3040c;Parent=gene:Rv3040c;biotype=protein_coding;transcript_id=Rv3040c Chromosome ena exon 3400192 3401058 . - . Parent=transcript:Rv3040c;Name=Rv3040c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3040c-1;rank=1 Chromosome ena CDS 3400192 3401058 . - 0 ID=CDS:Rv3040c;Parent=transcript:Rv3040c;protein_id=Rv3040c ### -Chromosome ena gene 3401055 3401918 . - . ID=gene:Rv3041c;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv3041c;logic_name=ena +Chromosome ena gene 3401055 3401918 . - . ID=gene:Rv3041c;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv3041c;logic_name=ena Chromosome ena mRNA 3401055 3401918 . - . ID=transcript:Rv3041c;Parent=gene:Rv3041c;biotype=protein_coding;transcript_id=Rv3041c Chromosome ena exon 3401055 3401918 . - . Parent=transcript:Rv3041c;Name=Rv3041c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3041c-1;rank=1 Chromosome ena CDS 3401055 3401918 . - 0 ID=CDS:Rv3041c;Parent=transcript:Rv3041c;protein_id=Rv3041c ### -Chromosome ena gene 3401933 3403162 . - . ID=gene:Rv3042c;Name=serB2;biotype=protein_coding;description=Probable phosphoserine phosphatase SerB2 (PSP) (O-phosphoserine phosphohydrolase) (pspase);gene_id=Rv3042c;logic_name=ena +Chromosome ena gene 3401933 3403162 . - . ID=gene:Rv3042c;Name=serB2;biotype=protein_coding;description=Probable phosphoserine phosphatase SerB2 (PSP) (O-phosphoserine phosphohydrolase) (pspase);gene_id=Rv3042c;logic_name=ena Chromosome ena mRNA 3401933 3403162 . - . ID=transcript:Rv3042c;Parent=gene:Rv3042c;Name=serB2-1;biotype=protein_coding;transcript_id=Rv3042c Chromosome ena exon 3401933 3403162 . - . Parent=transcript:Rv3042c;Name=Rv3042c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3042c-1;rank=1 Chromosome ena CDS 3401933 3403162 . - 0 ID=CDS:Rv3042c;Parent=transcript:Rv3042c;protein_id=Rv3042c ### -Chromosome ena gene 3403200 3404921 . - . ID=gene:Rv3043c;Name=ctaD;biotype=protein_coding;description=Probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1);gene_id=Rv3043c;logic_name=ena +Chromosome ena gene 3403200 3404921 . - . ID=gene:Rv3043c;Name=ctaD;biotype=protein_coding;description=Probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1);gene_id=Rv3043c;logic_name=ena Chromosome ena mRNA 3403200 3404921 . - . ID=transcript:Rv3043c;Parent=gene:Rv3043c;Name=ctaD-1;biotype=protein_coding;transcript_id=Rv3043c Chromosome ena exon 3403200 3404921 . - . Parent=transcript:Rv3043c;Name=Rv3043c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3043c-1;rank=1 Chromosome ena CDS 3403200 3404921 . - 0 ID=CDS:Rv3043c;Parent=transcript:Rv3043c;protein_id=Rv3043c ### -Chromosome ena gene 3405136 3406215 . + . ID=gene:Rv3044;Name=fecB;biotype=protein_coding;description=Probable FEIII-dicitrate-binding periplasmic lipoprotein FecB;gene_id=Rv3044;logic_name=ena +Chromosome ena gene 3405136 3406215 . + . ID=gene:Rv3044;Name=fecB;biotype=protein_coding;description=Probable FEIII-dicitrate-binding periplasmic lipoprotein FecB;gene_id=Rv3044;logic_name=ena Chromosome ena mRNA 3405136 3406215 . + . ID=transcript:Rv3044;Parent=gene:Rv3044;Name=fecB-1;biotype=protein_coding;transcript_id=Rv3044 Chromosome ena exon 3405136 3406215 . + . Parent=transcript:Rv3044;Name=Rv3044-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3044-1;rank=1 Chromosome ena CDS 3405136 3406215 . + 0 ID=CDS:Rv3044;Parent=transcript:Rv3044;protein_id=Rv3044 ### -Chromosome ena gene 3406285 3407325 . + . ID=gene:Rv3045;Name=adhC;biotype=protein_coding;description=Probable NADP-dependent alcohol dehydrogenase AdhC;gene_id=Rv3045;logic_name=ena +Chromosome ena gene 3406285 3407325 . + . ID=gene:Rv3045;Name=adhC;biotype=protein_coding;description=Probable NADP-dependent alcohol dehydrogenase AdhC;gene_id=Rv3045;logic_name=ena Chromosome ena mRNA 3406285 3407325 . + . ID=transcript:Rv3045;Parent=gene:Rv3045;Name=adhC-1;biotype=protein_coding;transcript_id=Rv3045 Chromosome ena exon 3406285 3407325 . + . Parent=transcript:Rv3045;Name=Rv3045-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3045-1;rank=1 Chromosome ena CDS 3406285 3407325 . + 0 ID=CDS:Rv3045;Parent=transcript:Rv3045;protein_id=Rv3045 ### -Chromosome ena gene 3407314 3407688 . - . ID=gene:Rv3046c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3046c;logic_name=ena +Chromosome ena gene 3407314 3407688 . - . ID=gene:Rv3046c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3046c;logic_name=ena Chromosome ena mRNA 3407314 3407688 . - . ID=transcript:Rv3046c;Parent=gene:Rv3046c;biotype=protein_coding;transcript_id=Rv3046c Chromosome ena exon 3407314 3407688 . - . Parent=transcript:Rv3046c;Name=Rv3046c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3046c-1;rank=1 Chromosome ena CDS 3407314 3407688 . - 0 ID=CDS:Rv3046c;Parent=transcript:Rv3046c;protein_id=Rv3046c ### -Chromosome ena gene 3408022 3408306 . - . ID=gene:Rv3047c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3047c;logic_name=ena +Chromosome ena gene 3408022 3408306 . - . ID=gene:Rv3047c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3047c;logic_name=ena Chromosome ena mRNA 3408022 3408306 . - . ID=transcript:Rv3047c;Parent=gene:Rv3047c;biotype=protein_coding;transcript_id=Rv3047c Chromosome ena exon 3408022 3408306 . - . Parent=transcript:Rv3047c;Name=Rv3047c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3047c-1;rank=1 Chromosome ena CDS 3408022 3408306 . - 0 ID=CDS:Rv3047c;Parent=transcript:Rv3047c;protein_id=Rv3047c ### -Chromosome ena gene 3408404 3409378 . - . ID=gene:Rv3048c;Name=nrdF2;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdF2 (ribonucleotide reductase small subunit) (R2F protein);gene_id=Rv3048c;logic_name=ena +Chromosome ena gene 3408404 3409378 . - . ID=gene:Rv3048c;Name=nrdF2;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (beta chain) NrdF2 (ribonucleotide reductase small subunit) (R2F protein);gene_id=Rv3048c;logic_name=ena Chromosome ena mRNA 3408404 3409378 . - . ID=transcript:Rv3048c;Parent=gene:Rv3048c;Name=nrdF2-1;biotype=protein_coding;transcript_id=Rv3048c Chromosome ena exon 3408404 3409378 . - . Parent=transcript:Rv3048c;Name=Rv3048c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3048c-1;rank=1 Chromosome ena CDS 3408404 3409378 . - 0 ID=CDS:Rv3048c;Parent=transcript:Rv3048c;protein_id=Rv3048c ### -Chromosome ena gene 3409509 3411083 . - . ID=gene:Rv3049c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv3049c;logic_name=ena +Chromosome ena gene 3409509 3411083 . - . ID=gene:Rv3049c;biotype=protein_coding;description=Probable monooxygenase;gene_id=Rv3049c;logic_name=ena Chromosome ena mRNA 3409509 3411083 . - . ID=transcript:Rv3049c;Parent=gene:Rv3049c;biotype=protein_coding;transcript_id=Rv3049c Chromosome ena exon 3409509 3411083 . - . Parent=transcript:Rv3049c;Name=Rv3049c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3049c-1;rank=1 Chromosome ena CDS 3409509 3411083 . - 0 ID=CDS:Rv3049c;Parent=transcript:Rv3049c;protein_id=Rv3049c ### -Chromosome ena gene 3411217 3411957 . - . ID=gene:Rv3050c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably AsnC-family);gene_id=Rv3050c;logic_name=ena +Chromosome ena gene 3411217 3411957 . - . ID=gene:Rv3050c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably AsnC-family);gene_id=Rv3050c;logic_name=ena Chromosome ena mRNA 3411217 3411957 . - . ID=transcript:Rv3050c;Parent=gene:Rv3050c;biotype=protein_coding;transcript_id=Rv3050c Chromosome ena exon 3411217 3411957 . - . Parent=transcript:Rv3050c;Name=Rv3050c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3050c-1;rank=1 Chromosome ena CDS 3411217 3411957 . - 0 ID=CDS:Rv3050c;Parent=transcript:Rv3050c;protein_id=Rv3050c ### -Chromosome ena gene 3412085 3414166 . - . ID=gene:Rv3051c;Name=nrdE;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (alpha chain) NrdE (ribonucleotide reductase small subunit) (R1F protein);gene_id=Rv3051c;logic_name=ena +Chromosome ena gene 3412085 3414166 . - . ID=gene:Rv3051c;Name=nrdE;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase (alpha chain) NrdE (ribonucleotide reductase small subunit) (R1F protein);gene_id=Rv3051c;logic_name=ena Chromosome ena mRNA 3412085 3414166 . - . ID=transcript:Rv3051c;Parent=gene:Rv3051c;Name=nrdE-1;biotype=protein_coding;transcript_id=Rv3051c Chromosome ena exon 3412085 3414166 . - . Parent=transcript:Rv3051c;Name=Rv3051c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3051c-1;rank=1 Chromosome ena CDS 3412085 3414166 . - 0 ID=CDS:Rv3051c;Parent=transcript:Rv3051c;protein_id=Rv3051c ### -Chromosome ena gene 3414232 3414684 . - . ID=gene:Rv3052c;Name=nrdI;biotype=protein_coding;description=Probable NrdI protein;gene_id=Rv3052c;logic_name=ena +Chromosome ena gene 3414232 3414684 . - . ID=gene:Rv3052c;Name=nrdI;biotype=protein_coding;description=Probable NrdI protein;gene_id=Rv3052c;logic_name=ena Chromosome ena mRNA 3414232 3414684 . - . ID=transcript:Rv3052c;Parent=gene:Rv3052c;Name=nrdI-1;biotype=protein_coding;transcript_id=Rv3052c Chromosome ena exon 3414232 3414684 . - . Parent=transcript:Rv3052c;Name=Rv3052c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3052c-1;rank=1 Chromosome ena CDS 3414232 3414684 . - 0 ID=CDS:Rv3052c;Parent=transcript:Rv3052c;protein_id=Rv3052c ### -Chromosome ena gene 3414719 3414958 . - . ID=gene:Rv3053c;Name=nrdH;biotype=protein_coding;description=Probable glutaredoxin electron transport component of NRDEF (glutaredoxin-like protein) NrdH;gene_id=Rv3053c;logic_name=ena +Chromosome ena gene 3414719 3414958 . - . ID=gene:Rv3053c;Name=nrdH;biotype=protein_coding;description=Probable glutaredoxin electron transport component of NRDEF (glutaredoxin-like protein) NrdH;gene_id=Rv3053c;logic_name=ena Chromosome ena mRNA 3414719 3414958 . - . ID=transcript:Rv3053c;Parent=gene:Rv3053c;Name=nrdH-1;biotype=protein_coding;transcript_id=Rv3053c Chromosome ena exon 3414719 3414958 . - . Parent=transcript:Rv3053c;Name=Rv3053c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3053c-1;rank=1 Chromosome ena CDS 3414719 3414958 . - 0 ID=CDS:Rv3053c;Parent=transcript:Rv3053c;protein_id=Rv3053c ### -Chromosome ena gene 3415435 3415989 . - . ID=gene:Rv3054c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3054c;logic_name=ena +Chromosome ena gene 3415435 3415989 . - . ID=gene:Rv3054c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3054c;logic_name=ena Chromosome ena mRNA 3415435 3415989 . - . ID=transcript:Rv3054c;Parent=gene:Rv3054c;biotype=protein_coding;transcript_id=Rv3054c Chromosome ena exon 3415435 3415989 . - . Parent=transcript:Rv3054c;Name=Rv3054c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3054c-1;rank=1 Chromosome ena CDS 3415435 3415989 . - 0 ID=CDS:Rv3054c;Parent=transcript:Rv3054c;protein_id=Rv3054c ### -Chromosome ena gene 3416081 3416695 . + . ID=gene:Rv3055;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3055;logic_name=ena +Chromosome ena gene 3416081 3416695 . + . ID=gene:Rv3055;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3055;logic_name=ena Chromosome ena mRNA 3416081 3416695 . + . ID=transcript:Rv3055;Parent=gene:Rv3055;biotype=protein_coding;transcript_id=Rv3055 Chromosome ena exon 3416081 3416695 . + . Parent=transcript:Rv3055;Name=Rv3055-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3055-1;rank=1 Chromosome ena CDS 3416081 3416695 . + 0 ID=CDS:Rv3055;Parent=transcript:Rv3055;protein_id=Rv3055 ### -Chromosome ena gene 3416705 3417745 . + . ID=gene:Rv3056;Name=dinP;biotype=protein_coding;description=Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed));gene_id=Rv3056;logic_name=ena +Chromosome ena gene 3416705 3417745 . + . ID=gene:Rv3056;Name=dinP;biotype=protein_coding;description=Possible DNA-damage-inducible protein P DinP (DNA polymerase V) (pol IV 2) (DNA nucleotidyltransferase (DNA-directed));gene_id=Rv3056;logic_name=ena Chromosome ena mRNA 3416705 3417745 . + . ID=transcript:Rv3056;Parent=gene:Rv3056;Name=dinP-1;biotype=protein_coding;transcript_id=Rv3056 Chromosome ena exon 3416705 3417745 . + . Parent=transcript:Rv3056;Name=Rv3056-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3056-1;rank=1 Chromosome ena CDS 3416705 3417745 . + 0 ID=CDS:Rv3056;Parent=transcript:Rv3056;protein_id=Rv3056 ### -Chromosome ena gene 3417799 3418662 . - . ID=gene:Rv3057c;biotype=protein_coding;description=Probable short chain alcohol dehydrogenase/reductase;gene_id=Rv3057c;logic_name=ena +Chromosome ena gene 3417799 3418662 . - . ID=gene:Rv3057c;biotype=protein_coding;description=Probable short chain alcohol dehydrogenase/reductase;gene_id=Rv3057c;logic_name=ena Chromosome ena mRNA 3417799 3418662 . - . ID=transcript:Rv3057c;Parent=gene:Rv3057c;biotype=protein_coding;transcript_id=Rv3057c Chromosome ena exon 3417799 3418662 . - . Parent=transcript:Rv3057c;Name=Rv3057c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3057c-1;rank=1 Chromosome ena CDS 3417799 3418662 . - 0 ID=CDS:Rv3057c;Parent=transcript:Rv3057c;protein_id=Rv3057c ### -Chromosome ena gene 3418726 3419376 . - . ID=gene:Rv3058c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3058c;logic_name=ena +Chromosome ena gene 3418726 3419376 . - . ID=gene:Rv3058c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3058c;logic_name=ena Chromosome ena mRNA 3418726 3419376 . - . ID=transcript:Rv3058c;Parent=gene:Rv3058c;biotype=protein_coding;transcript_id=Rv3058c Chromosome ena exon 3418726 3419376 . - . Parent=transcript:Rv3058c;Name=Rv3058c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3058c-1;rank=1 Chromosome ena CDS 3418726 3419376 . - 0 ID=CDS:Rv3058c;Parent=transcript:Rv3058c;protein_id=Rv3058c ### -Chromosome ena gene 3419492 3420970 . + . ID=gene:Rv3059;Name=cyp136;biotype=protein_coding;description=Probable cytochrome P450 136 Cyp136;gene_id=Rv3059;logic_name=ena +Chromosome ena gene 3419492 3420970 . + . ID=gene:Rv3059;Name=cyp136;biotype=protein_coding;description=Probable cytochrome P450 136 Cyp136;gene_id=Rv3059;logic_name=ena Chromosome ena mRNA 3419492 3420970 . + . ID=transcript:Rv3059;Parent=gene:Rv3059;Name=cyp136-1;biotype=protein_coding;transcript_id=Rv3059 Chromosome ena exon 3419492 3420970 . + . Parent=transcript:Rv3059;Name=Rv3059-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3059-1;rank=1 Chromosome ena CDS 3419492 3420970 . + 0 ID=CDS:Rv3059;Parent=transcript:Rv3059;protein_id=Rv3059 ### -Chromosome ena gene 3421741 3423213 . - . ID=gene:Rv3060c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv3060c;logic_name=ena +Chromosome ena gene 3421741 3423213 . - . ID=gene:Rv3060c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably GntR-family);gene_id=Rv3060c;logic_name=ena Chromosome ena mRNA 3421741 3423213 . - . ID=transcript:Rv3060c;Parent=gene:Rv3060c;biotype=protein_coding;transcript_id=Rv3060c Chromosome ena exon 3421741 3423213 . - . Parent=transcript:Rv3060c;Name=Rv3060c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3060c-1;rank=1 Chromosome ena CDS 3421741 3423213 . - 0 ID=CDS:Rv3060c;Parent=transcript:Rv3060c;protein_id=Rv3060c ### -Chromosome ena gene 3423262 3425427 . - . ID=gene:Rv3061c;Name=fadE22;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE22;gene_id=Rv3061c;logic_name=ena +Chromosome ena gene 3423262 3425427 . - . ID=gene:Rv3061c;Name=fadE22;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE22;gene_id=Rv3061c;logic_name=ena Chromosome ena mRNA 3423262 3425427 . - . ID=transcript:Rv3061c;Parent=gene:Rv3061c;Name=fadE22-1;biotype=protein_coding;transcript_id=Rv3061c Chromosome ena exon 3423262 3425427 . - . Parent=transcript:Rv3061c;Name=Rv3061c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3061c-1;rank=1 Chromosome ena CDS 3423262 3425427 . - 0 ID=CDS:Rv3061c;Parent=transcript:Rv3061c;protein_id=Rv3061c ### -Chromosome ena gene 3425584 3427107 . + . ID=gene:Rv3062;Name=ligB;biotype=protein_coding;description=Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase);gene_id=Rv3062;logic_name=ena +Chromosome ena gene 3425584 3427107 . + . ID=gene:Rv3062;Name=ligB;biotype=protein_coding;description=Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase);gene_id=Rv3062;logic_name=ena Chromosome ena mRNA 3425584 3427107 . + . ID=transcript:Rv3062;Parent=gene:Rv3062;Name=ligB-1;biotype=protein_coding;transcript_id=Rv3062 Chromosome ena exon 3425584 3427107 . + . Parent=transcript:Rv3062;Name=Rv3062-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3062-1;rank=1 Chromosome ena CDS 3425584 3427107 . + 0 ID=CDS:Rv3062;Parent=transcript:Rv3062;protein_id=Rv3062 ### -Chromosome ena gene 3427243 3429519 . + . ID=gene:Rv3063;Name=cstA;biotype=protein_coding;description=Probable carbon starvation protein A homolog CstA;gene_id=Rv3063;logic_name=ena +Chromosome ena gene 3427243 3429519 . + . ID=gene:Rv3063;Name=cstA;biotype=protein_coding;description=Probable carbon starvation protein A homolog CstA;gene_id=Rv3063;logic_name=ena Chromosome ena mRNA 3427243 3429519 . + . ID=transcript:Rv3063;Parent=gene:Rv3063;Name=cstA-1;biotype=protein_coding;transcript_id=Rv3063 Chromosome ena exon 3427243 3429519 . + . Parent=transcript:Rv3063;Name=Rv3063-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3063-1;rank=1 Chromosome ena CDS 3427243 3429519 . + 0 ID=CDS:Rv3063;Parent=transcript:Rv3063;protein_id=Rv3063 ### -Chromosome ena gene 3429825 3430250 . - . ID=gene:Rv3064c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3064c;logic_name=ena +Chromosome ena gene 3429825 3430250 . - . ID=gene:Rv3064c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3064c;logic_name=ena Chromosome ena mRNA 3429825 3430250 . - . ID=transcript:Rv3064c;Parent=gene:Rv3064c;biotype=protein_coding;transcript_id=Rv3064c Chromosome ena exon 3429825 3430250 . - . Parent=transcript:Rv3064c;Name=Rv3064c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3064c-1;rank=1 Chromosome ena CDS 3429825 3430250 . - 0 ID=CDS:Rv3064c;Parent=transcript:Rv3064c;protein_id=Rv3064c ### -Chromosome ena gene 3430387 3430710 . + . ID=gene:Rv3065;Name=mmr;biotype=protein_coding;description=Multidrugs-transport integral membrane protein Mmr;gene_id=Rv3065;logic_name=ena +Chromosome ena gene 3430387 3430710 . + . ID=gene:Rv3065;Name=mmr;biotype=protein_coding;description=Multidrugs-transport integral membrane protein Mmr;gene_id=Rv3065;logic_name=ena Chromosome ena mRNA 3430387 3430710 . + . ID=transcript:Rv3065;Parent=gene:Rv3065;Name=mmr-1;biotype=protein_coding;transcript_id=Rv3065 Chromosome ena exon 3430387 3430710 . + . Parent=transcript:Rv3065;Name=Rv3065-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3065-1;rank=1 Chromosome ena CDS 3430387 3430710 . + 0 ID=CDS:Rv3065;Parent=transcript:Rv3065;protein_id=Rv3065 ### -Chromosome ena gene 3430707 3431315 . + . ID=gene:Rv3066;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably DeoR-family);gene_id=Rv3066;logic_name=ena +Chromosome ena gene 3430707 3431315 . + . ID=gene:Rv3066;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably DeoR-family);gene_id=Rv3066;logic_name=ena Chromosome ena mRNA 3430707 3431315 . + . ID=transcript:Rv3066;Parent=gene:Rv3066;biotype=protein_coding;transcript_id=Rv3066 Chromosome ena exon 3430707 3431315 . + . Parent=transcript:Rv3066;Name=Rv3066-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3066-1;rank=1 Chromosome ena CDS 3430707 3431315 . + 0 ID=CDS:Rv3066;Parent=transcript:Rv3066;protein_id=Rv3066 ### -Chromosome ena gene 3431428 3431838 . + . ID=gene:Rv3067;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3067;logic_name=ena +Chromosome ena gene 3431428 3431838 . + . ID=gene:Rv3067;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3067;logic_name=ena Chromosome ena mRNA 3431428 3431838 . + . ID=transcript:Rv3067;Parent=gene:Rv3067;biotype=protein_coding;transcript_id=Rv3067 Chromosome ena exon 3431428 3431838 . + . Parent=transcript:Rv3067;Name=Rv3067-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3067-1;rank=1 Chromosome ena CDS 3431428 3431838 . + 0 ID=CDS:Rv3067;Parent=transcript:Rv3067;protein_id=Rv3067 @@ -16122,2736 +16122,2736 @@ Chromosome ena transcript 3431840 3431912 . - . ID=transcript:EBG00000313333;Par Chromosome ena exon 3431840 3431912 . - . Parent=transcript:EBG00000313333;Name=EBG00000313333;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313333;rank=1 ### Chromosome ena_gene biological_region 3431840 3431912 . - . external_name=AL123456.3:gene:complement(3431840..3431912);logic_name=ena_gene -Chromosome ena gene 3431979 3433622 . - . ID=gene:Rv3068c;Name=pgmA;biotype=protein_coding;description=Probable phosphoglucomutase PgmA (glucose phosphomutase) (PGM);gene_id=Rv3068c;logic_name=ena +Chromosome ena gene 3431979 3433622 . - . ID=gene:Rv3068c;Name=pgmA;biotype=protein_coding;description=Probable phosphoglucomutase PgmA (glucose phosphomutase) (PGM);gene_id=Rv3068c;logic_name=ena Chromosome ena mRNA 3431979 3433622 . - . ID=transcript:Rv3068c;Parent=gene:Rv3068c;Name=pgmA-1;biotype=protein_coding;transcript_id=Rv3068c Chromosome ena exon 3431979 3433622 . - . Parent=transcript:Rv3068c;Name=Rv3068c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3068c-1;rank=1 Chromosome ena CDS 3431979 3433622 . - 0 ID=CDS:Rv3068c;Parent=transcript:Rv3068c;protein_id=Rv3068c ### -Chromosome ena gene 3433692 3434090 . + . ID=gene:Rv3069;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3069;logic_name=ena +Chromosome ena gene 3433692 3434090 . + . ID=gene:Rv3069;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3069;logic_name=ena Chromosome ena mRNA 3433692 3434090 . + . ID=transcript:Rv3069;Parent=gene:Rv3069;biotype=protein_coding;transcript_id=Rv3069 Chromosome ena exon 3433692 3434090 . + . Parent=transcript:Rv3069;Name=Rv3069-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3069-1;rank=1 Chromosome ena CDS 3433692 3434090 . + 0 ID=CDS:Rv3069;Parent=transcript:Rv3069;protein_id=Rv3069 ### -Chromosome ena gene 3434087 3434467 . + . ID=gene:Rv3070;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3070;logic_name=ena +Chromosome ena gene 3434087 3434467 . + . ID=gene:Rv3070;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3070;logic_name=ena Chromosome ena mRNA 3434087 3434467 . + . ID=transcript:Rv3070;Parent=gene:Rv3070;biotype=protein_coding;transcript_id=Rv3070 Chromosome ena exon 3434087 3434467 . + . Parent=transcript:Rv3070;Name=Rv3070-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3070-1;rank=1 Chromosome ena CDS 3434087 3434467 . + 0 ID=CDS:Rv3070;Parent=transcript:Rv3070;protein_id=Rv3070 ### -Chromosome ena gene 3434464 3435573 . + . ID=gene:Rv3071;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3071;logic_name=ena +Chromosome ena gene 3434464 3435573 . + . ID=gene:Rv3071;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3071;logic_name=ena Chromosome ena mRNA 3434464 3435573 . + . ID=transcript:Rv3071;Parent=gene:Rv3071;biotype=protein_coding;transcript_id=Rv3071 Chromosome ena exon 3434464 3435573 . + . Parent=transcript:Rv3071;Name=Rv3071-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3071-1;rank=1 Chromosome ena CDS 3434464 3435573 . + 0 ID=CDS:Rv3071;Parent=transcript:Rv3071;protein_id=Rv3071 ### -Chromosome ena gene 3435798 3436322 . - . ID=gene:Rv3072c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3072c;logic_name=ena +Chromosome ena gene 3435798 3436322 . - . ID=gene:Rv3072c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3072c;logic_name=ena Chromosome ena mRNA 3435798 3436322 . - . ID=transcript:Rv3072c;Parent=gene:Rv3072c;biotype=protein_coding;transcript_id=Rv3072c Chromosome ena exon 3435798 3436322 . - . Parent=transcript:Rv3072c;Name=Rv3072c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3072c-1;rank=1 Chromosome ena CDS 3435798 3436322 . - 0 ID=CDS:Rv3072c;Parent=transcript:Rv3072c;protein_id=Rv3072c ### -Chromosome ena gene 3436329 3436685 . - . ID=gene:Rv3073c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3073c;logic_name=ena +Chromosome ena gene 3436329 3436685 . - . ID=gene:Rv3073c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3073c;logic_name=ena Chromosome ena mRNA 3436329 3436685 . - . ID=transcript:Rv3073c;Parent=gene:Rv3073c;biotype=protein_coding;transcript_id=Rv3073c Chromosome ena exon 3436329 3436685 . - . Parent=transcript:Rv3073c;Name=Rv3073c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3073c-1;rank=1 Chromosome ena CDS 3436329 3436685 . - 0 ID=CDS:Rv3073c;Parent=transcript:Rv3073c;protein_id=Rv3073c ### -Chromosome ena gene 3436779 3438053 . + . ID=gene:Rv3074;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3074;logic_name=ena +Chromosome ena gene 3436779 3438053 . + . ID=gene:Rv3074;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3074;logic_name=ena Chromosome ena mRNA 3436779 3438053 . + . ID=transcript:Rv3074;Parent=gene:Rv3074;biotype=protein_coding;transcript_id=Rv3074 Chromosome ena exon 3436779 3438053 . + . Parent=transcript:Rv3074;Name=Rv3074-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3074-1;rank=1 Chromosome ena CDS 3436779 3438053 . + 0 ID=CDS:Rv3074;Parent=transcript:Rv3074;protein_id=Rv3074 ### -Chromosome ena gene 3438050 3438973 . - . ID=gene:Rv3075c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3075c;logic_name=ena +Chromosome ena gene 3438050 3438973 . - . ID=gene:Rv3075c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3075c;logic_name=ena Chromosome ena mRNA 3438050 3438973 . - . ID=transcript:Rv3075c;Parent=gene:Rv3075c;biotype=protein_coding;transcript_id=Rv3075c Chromosome ena exon 3438050 3438973 . - . Parent=transcript:Rv3075c;Name=Rv3075c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3075c-1;rank=1 Chromosome ena CDS 3438050 3438973 . - 0 ID=CDS:Rv3075c;Parent=transcript:Rv3075c;protein_id=Rv3075c ### -Chromosome ena gene 3439072 3439548 . + . ID=gene:Rv3076;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3076;logic_name=ena +Chromosome ena gene 3439072 3439548 . + . ID=gene:Rv3076;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3076;logic_name=ena Chromosome ena mRNA 3439072 3439548 . + . ID=transcript:Rv3076;Parent=gene:Rv3076;biotype=protein_coding;transcript_id=Rv3076 Chromosome ena exon 3439072 3439548 . + . Parent=transcript:Rv3076;Name=Rv3076-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3076-1;rank=1 Chromosome ena CDS 3439072 3439548 . + 0 ID=CDS:Rv3076;Parent=transcript:Rv3076;protein_id=Rv3076 ### -Chromosome ena gene 3439541 3441352 . + . ID=gene:Rv3077;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3077;logic_name=ena +Chromosome ena gene 3439541 3441352 . + . ID=gene:Rv3077;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3077;logic_name=ena Chromosome ena mRNA 3439541 3441352 . + . ID=transcript:Rv3077;Parent=gene:Rv3077;biotype=protein_coding;transcript_id=Rv3077 Chromosome ena exon 3439541 3441352 . + . Parent=transcript:Rv3077;Name=Rv3077-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3077-1;rank=1 Chromosome ena CDS 3439541 3441352 . + 0 ID=CDS:Rv3077;Parent=transcript:Rv3077;protein_id=Rv3077 ### -Chromosome ena gene 3441353 3441754 . + . ID=gene:Rv3078;Name=hab;biotype=protein_coding;description=Probable hydroxylaminobenzene mutase Hab;gene_id=Rv3078;logic_name=ena +Chromosome ena gene 3441353 3441754 . + . ID=gene:Rv3078;Name=hab;biotype=protein_coding;description=Probable hydroxylaminobenzene mutase Hab;gene_id=Rv3078;logic_name=ena Chromosome ena mRNA 3441353 3441754 . + . ID=transcript:Rv3078;Parent=gene:Rv3078;Name=hab-1;biotype=protein_coding;transcript_id=Rv3078 Chromosome ena exon 3441353 3441754 . + . Parent=transcript:Rv3078;Name=Rv3078-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3078-1;rank=1 Chromosome ena CDS 3441353 3441754 . + 0 ID=CDS:Rv3078;Parent=transcript:Rv3078;protein_id=Rv3078 ### -Chromosome ena gene 3441770 3442597 . - . ID=gene:Rv3079c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3079c;logic_name=ena +Chromosome ena gene 3441770 3442597 . - . ID=gene:Rv3079c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3079c;logic_name=ena Chromosome ena mRNA 3441770 3442597 . - . ID=transcript:Rv3079c;Parent=gene:Rv3079c;biotype=protein_coding;transcript_id=Rv3079c Chromosome ena exon 3441770 3442597 . - . Parent=transcript:Rv3079c;Name=Rv3079c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3079c-1;rank=1 Chromosome ena CDS 3441770 3442597 . - 0 ID=CDS:Rv3079c;Parent=transcript:Rv3079c;protein_id=Rv3079c ### -Chromosome ena gene 3442656 3445988 . - . ID=gene:Rv3080c;Name=pknK;biotype=protein_coding;description=Serine/threonine-protein kinase transcriptional regulatory protein PknK (protein kinase K) (STPK K);gene_id=Rv3080c;logic_name=ena +Chromosome ena gene 3442656 3445988 . - . ID=gene:Rv3080c;Name=pknK;biotype=protein_coding;description=Serine/threonine-protein kinase transcriptional regulatory protein PknK (protein kinase K) (STPK K);gene_id=Rv3080c;logic_name=ena Chromosome ena mRNA 3442656 3445988 . - . ID=transcript:Rv3080c;Parent=gene:Rv3080c;Name=pknK-1;biotype=protein_coding;transcript_id=Rv3080c Chromosome ena exon 3442656 3445988 . - . Parent=transcript:Rv3080c;Name=Rv3080c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3080c-1;rank=1 Chromosome ena CDS 3442656 3445988 . - 0 ID=CDS:Rv3080c;Parent=transcript:Rv3080c;protein_id=Rv3080c ### -Chromosome ena gene 3446040 3447278 . + . ID=gene:Rv3081;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3081;logic_name=ena +Chromosome ena gene 3446040 3447278 . + . ID=gene:Rv3081;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3081;logic_name=ena Chromosome ena mRNA 3446040 3447278 . + . ID=transcript:Rv3081;Parent=gene:Rv3081;biotype=protein_coding;transcript_id=Rv3081 Chromosome ena exon 3446040 3447278 . + . Parent=transcript:Rv3081;Name=Rv3081-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3081-1;rank=1 Chromosome ena CDS 3446040 3447278 . + 0 ID=CDS:Rv3081;Parent=transcript:Rv3081;protein_id=Rv3081 ### -Chromosome ena gene 3447404 3448426 . - . ID=gene:Rv3082c;Name=virS;biotype=protein_coding;description=Virulence-regulating transcriptional regulator VirS (AraC/XylS family);gene_id=Rv3082c;logic_name=ena +Chromosome ena gene 3447404 3448426 . - . ID=gene:Rv3082c;Name=virS;biotype=protein_coding;description=Virulence-regulating transcriptional regulator VirS (AraC/XylS family);gene_id=Rv3082c;logic_name=ena Chromosome ena mRNA 3447404 3448426 . - . ID=transcript:Rv3082c;Parent=gene:Rv3082c;Name=virS-1;biotype=protein_coding;transcript_id=Rv3082c Chromosome ena exon 3447404 3448426 . - . Parent=transcript:Rv3082c;Name=Rv3082c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3082c-1;rank=1 Chromosome ena CDS 3447404 3448426 . - 0 ID=CDS:Rv3082c;Parent=transcript:Rv3082c;protein_id=Rv3082c ### -Chromosome ena gene 3448504 3449991 . + . ID=gene:Rv3083;biotype=protein_coding;description=Probable monooxygenase (hydroxylase);gene_id=Rv3083;logic_name=ena +Chromosome ena gene 3448504 3449991 . + . ID=gene:Rv3083;biotype=protein_coding;description=Probable monooxygenase (hydroxylase);gene_id=Rv3083;logic_name=ena Chromosome ena mRNA 3448504 3449991 . + . ID=transcript:Rv3083;Parent=gene:Rv3083;biotype=protein_coding;transcript_id=Rv3083 Chromosome ena exon 3448504 3449991 . + . Parent=transcript:Rv3083;Name=Rv3083-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3083-1;rank=1 Chromosome ena CDS 3448504 3449991 . + 0 ID=CDS:Rv3083;Parent=transcript:Rv3083;protein_id=Rv3083 ### -Chromosome ena gene 3449997 3450923 . + . ID=gene:Rv3084;Name=lipR;biotype=protein_coding;description=Probable acetyl-hydrolase/esterase LipR;gene_id=Rv3084;logic_name=ena +Chromosome ena gene 3449997 3450923 . + . ID=gene:Rv3084;Name=lipR;biotype=protein_coding;description=Probable acetyl-hydrolase/esterase LipR;gene_id=Rv3084;logic_name=ena Chromosome ena mRNA 3449997 3450923 . + . ID=transcript:Rv3084;Parent=gene:Rv3084;Name=lipR-1;biotype=protein_coding;transcript_id=Rv3084 Chromosome ena exon 3449997 3450923 . + . Parent=transcript:Rv3084;Name=Rv3084-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3084-1;rank=1 Chromosome ena CDS 3449997 3450923 . + 0 ID=CDS:Rv3084;Parent=transcript:Rv3084;protein_id=Rv3084 ### -Chromosome ena gene 3450920 3451750 . + . ID=gene:Rv3085;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3085;logic_name=ena +Chromosome ena gene 3450920 3451750 . + . ID=gene:Rv3085;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3085;logic_name=ena Chromosome ena mRNA 3450920 3451750 . + . ID=transcript:Rv3085;Parent=gene:Rv3085;biotype=protein_coding;transcript_id=Rv3085 Chromosome ena exon 3450920 3451750 . + . Parent=transcript:Rv3085;Name=Rv3085-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3085-1;rank=1 Chromosome ena CDS 3450920 3451750 . + 0 ID=CDS:Rv3085;Parent=transcript:Rv3085;protein_id=Rv3085 ### -Chromosome ena gene 3451781 3452887 . + . ID=gene:Rv3086;Name=adhD;biotype=protein_coding;description=Probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase);gene_id=Rv3086;logic_name=ena +Chromosome ena gene 3451781 3452887 . + . ID=gene:Rv3086;Name=adhD;biotype=protein_coding;description=Probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase);gene_id=Rv3086;logic_name=ena Chromosome ena mRNA 3451781 3452887 . + . ID=transcript:Rv3086;Parent=gene:Rv3086;Name=adhD-1;biotype=protein_coding;transcript_id=Rv3086 Chromosome ena exon 3451781 3452887 . + . Parent=transcript:Rv3086;Name=Rv3086-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3086-1;rank=1 Chromosome ena CDS 3451781 3452887 . + 0 ID=CDS:Rv3086;Parent=transcript:Rv3086;protein_id=Rv3086 ### -Chromosome ena gene 3452925 3454343 . + . ID=gene:Rv3087;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3087;logic_name=ena +Chromosome ena gene 3452925 3454343 . + . ID=gene:Rv3087;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3087;logic_name=ena Chromosome ena mRNA 3452925 3454343 . + . ID=transcript:Rv3087;Parent=gene:Rv3087;biotype=protein_coding;transcript_id=Rv3087 Chromosome ena exon 3452925 3454343 . + . Parent=transcript:Rv3087;Name=Rv3087-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3087-1;rank=1 Chromosome ena CDS 3452925 3454343 . + 0 ID=CDS:Rv3087;Parent=transcript:Rv3087;protein_id=Rv3087 ### -Chromosome ena gene 3454340 3455764 . + . ID=gene:Rv3088;Name=tgs4;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs4;gene_id=Rv3088;logic_name=ena +Chromosome ena gene 3454340 3455764 . + . ID=gene:Rv3088;Name=tgs4;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs4;gene_id=Rv3088;logic_name=ena Chromosome ena mRNA 3454340 3455764 . + . ID=transcript:Rv3088;Parent=gene:Rv3088;Name=tgs4-1;biotype=protein_coding;transcript_id=Rv3088 Chromosome ena exon 3454340 3455764 . + . Parent=transcript:Rv3088;Name=Rv3088-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3088-1;rank=1 Chromosome ena CDS 3454340 3455764 . + 0 ID=CDS:Rv3088;Parent=transcript:Rv3088;protein_id=Rv3088 ### -Chromosome ena gene 3455761 3457272 . + . ID=gene:Rv3089;Name=fadD13;biotype=protein_coding;description=Probable chain-fatty-acid-CoA ligase FadD13 (fatty-acyl-CoA synthetase);gene_id=Rv3089;logic_name=ena +Chromosome ena gene 3455761 3457272 . + . ID=gene:Rv3089;Name=fadD13;biotype=protein_coding;description=Probable chain-fatty-acid-CoA ligase FadD13 (fatty-acyl-CoA synthetase);gene_id=Rv3089;logic_name=ena Chromosome ena mRNA 3455761 3457272 . + . ID=transcript:Rv3089;Parent=gene:Rv3089;Name=fadD13-1;biotype=protein_coding;transcript_id=Rv3089 Chromosome ena exon 3455761 3457272 . + . Parent=transcript:Rv3089;Name=Rv3089-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3089-1;rank=1 Chromosome ena CDS 3455761 3457272 . + 0 ID=CDS:Rv3089;Parent=transcript:Rv3089;protein_id=Rv3089 ### -Chromosome ena gene 3458211 3459098 . + . ID=gene:Rv3090;biotype=protein_coding;description=Unknown alanine and valine rich protein;gene_id=Rv3090;logic_name=ena +Chromosome ena gene 3458211 3459098 . + . ID=gene:Rv3090;biotype=protein_coding;description=Unknown alanine and valine rich protein;gene_id=Rv3090;logic_name=ena Chromosome ena mRNA 3458211 3459098 . + . ID=transcript:Rv3090;Parent=gene:Rv3090;biotype=protein_coding;transcript_id=Rv3090 Chromosome ena exon 3458211 3459098 . + . Parent=transcript:Rv3090;Name=Rv3090-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3090-1;rank=1 Chromosome ena CDS 3458211 3459098 . + 0 ID=CDS:Rv3090;Parent=transcript:Rv3090;protein_id=Rv3090 ### -Chromosome ena gene 3459116 3460807 . + . ID=gene:Rv3091;biotype=protein_coding;description=Conserved protein;gene_id=Rv3091;logic_name=ena +Chromosome ena gene 3459116 3460807 . + . ID=gene:Rv3091;biotype=protein_coding;description=Conserved protein;gene_id=Rv3091;logic_name=ena Chromosome ena mRNA 3459116 3460807 . + . ID=transcript:Rv3091;Parent=gene:Rv3091;biotype=protein_coding;transcript_id=Rv3091 Chromosome ena exon 3459116 3460807 . + . Parent=transcript:Rv3091;Name=Rv3091-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3091-1;rank=1 Chromosome ena CDS 3459116 3460807 . + 0 ID=CDS:Rv3091;Parent=transcript:Rv3091;protein_id=Rv3091 ### -Chromosome ena gene 3460814 3461734 . - . ID=gene:Rv3092c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3092c;logic_name=ena +Chromosome ena gene 3460814 3461734 . - . ID=gene:Rv3092c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3092c;logic_name=ena Chromosome ena mRNA 3460814 3461734 . - . ID=transcript:Rv3092c;Parent=gene:Rv3092c;biotype=protein_coding;transcript_id=Rv3092c Chromosome ena exon 3460814 3461734 . - . Parent=transcript:Rv3092c;Name=Rv3092c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3092c-1;rank=1 Chromosome ena CDS 3460814 3461734 . - 0 ID=CDS:Rv3092c;Parent=transcript:Rv3092c;protein_id=Rv3092c ### -Chromosome ena gene 3461760 3462764 . - . ID=gene:Rv3093c;biotype=protein_coding;description=Hypothetical oxidoreductase;gene_id=Rv3093c;logic_name=ena +Chromosome ena gene 3461760 3462764 . - . ID=gene:Rv3093c;biotype=protein_coding;description=Hypothetical oxidoreductase;gene_id=Rv3093c;logic_name=ena Chromosome ena mRNA 3461760 3462764 . - . ID=transcript:Rv3093c;Parent=gene:Rv3093c;biotype=protein_coding;transcript_id=Rv3093c Chromosome ena exon 3461760 3462764 . - . Parent=transcript:Rv3093c;Name=Rv3093c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3093c-1;rank=1 Chromosome ena CDS 3461760 3462764 . - 0 ID=CDS:Rv3093c;Parent=transcript:Rv3093c;protein_id=Rv3093c ### -Chromosome ena gene 3462761 3463891 . - . ID=gene:Rv3094c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3094c;logic_name=ena +Chromosome ena gene 3462761 3463891 . - . ID=gene:Rv3094c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3094c;logic_name=ena Chromosome ena mRNA 3462761 3463891 . - . ID=transcript:Rv3094c;Parent=gene:Rv3094c;biotype=protein_coding;transcript_id=Rv3094c Chromosome ena exon 3462761 3463891 . - . Parent=transcript:Rv3094c;Name=Rv3094c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3094c-1;rank=1 Chromosome ena CDS 3462761 3463891 . - 0 ID=CDS:Rv3094c;Parent=transcript:Rv3094c;protein_id=Rv3094c ### -Chromosome ena gene 3463973 3464449 . + . ID=gene:Rv3095;biotype=protein_coding;description=Hypothetical transcriptional regulatory protein;gene_id=Rv3095;logic_name=ena +Chromosome ena gene 3463973 3464449 . + . ID=gene:Rv3095;biotype=protein_coding;description=Hypothetical transcriptional regulatory protein;gene_id=Rv3095;logic_name=ena Chromosome ena mRNA 3463973 3464449 . + . ID=transcript:Rv3095;Parent=gene:Rv3095;biotype=protein_coding;transcript_id=Rv3095 Chromosome ena exon 3463973 3464449 . + . Parent=transcript:Rv3095;Name=Rv3095-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3095-1;rank=1 Chromosome ena CDS 3463973 3464449 . + 0 ID=CDS:Rv3095;Parent=transcript:Rv3095;protein_id=Rv3095 ### -Chromosome ena gene 3464547 3465686 . + . ID=gene:Rv3096;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3096;logic_name=ena +Chromosome ena gene 3464547 3465686 . + . ID=gene:Rv3096;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3096;logic_name=ena Chromosome ena mRNA 3464547 3465686 . + . ID=transcript:Rv3096;Parent=gene:Rv3096;biotype=protein_coding;transcript_id=Rv3096 Chromosome ena exon 3464547 3465686 . + . Parent=transcript:Rv3096;Name=Rv3096-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3096-1;rank=1 Chromosome ena CDS 3464547 3465686 . + 0 ID=CDS:Rv3096;Parent=transcript:Rv3096;protein_id=Rv3096 ### -Chromosome ena gene 3465778 3467091 . - . ID=gene:Rv3097c;Name=lipY;biotype=protein_coding;description=PE-PGRS family protein%2C triacylglycerol lipase LipY (esterase/lipase) (triglyceride lipase) (tributyrase);gene_id=Rv3097c;logic_name=ena +Chromosome ena gene 3465778 3467091 . - . ID=gene:Rv3097c;Name=lipY;biotype=protein_coding;description=PE-PGRS family protein%2C triacylglycerol lipase LipY (esterase/lipase) (triglyceride lipase) (tributyrase);gene_id=Rv3097c;logic_name=ena Chromosome ena mRNA 3465778 3467091 . - . ID=transcript:Rv3097c;Parent=gene:Rv3097c;Name=lipY-1;biotype=protein_coding;transcript_id=Rv3097c Chromosome ena exon 3465778 3467091 . - . Parent=transcript:Rv3097c;Name=Rv3097c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3097c-1;rank=1 Chromosome ena CDS 3465778 3467091 . - 0 ID=CDS:Rv3097c;Parent=transcript:Rv3097c;protein_id=Rv3097c ### -Chromosome ena gene 3467210 3467662 . - . ID=gene:Rv3098c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3098c;logic_name=ena +Chromosome ena gene 3467210 3467662 . - . ID=gene:Rv3098c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3098c;logic_name=ena Chromosome ena mRNA 3467210 3467662 . - . ID=transcript:Rv3098c;Parent=gene:Rv3098c;biotype=protein_coding;transcript_id=Rv3098c Chromosome ena exon 3467210 3467662 . - . Parent=transcript:Rv3098c;Name=Rv3098c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3098c-1;rank=1 Chromosome ena CDS 3467210 3467662 . - 0 ID=CDS:Rv3098c;Parent=transcript:Rv3098c;protein_id=Rv3098c ### -Chromosome ena gene 3467606 3467926 . + . ID=gene:Rv3098A;biotype=protein_coding;description=PemK-like protein;gene_id=Rv3098A;logic_name=ena +Chromosome ena gene 3467606 3467926 . + . ID=gene:Rv3098A;biotype=protein_coding;description=PemK-like protein;gene_id=Rv3098A;logic_name=ena Chromosome ena mRNA 3467606 3467926 . + . ID=transcript:Rv3098A;Parent=gene:Rv3098A;biotype=protein_coding;transcript_id=Rv3098A Chromosome ena exon 3467606 3467926 . + . Parent=transcript:Rv3098A;Name=Rv3098A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3098A-1;rank=1 Chromosome ena CDS 3467606 3467926 . + 0 ID=CDS:Rv3098A;Parent=transcript:Rv3098A;protein_id=Rv3098A ### Chromosome ena_gene biological_region 3467967 3468334 . - . external_name=AL123456.3:gene:complement(3467967..3468334);logic_name=ena_gene -Chromosome ena_misc_rna biological_region 3467967 3468334 . - . external_name=ssr%2C match to EM_BA:MT10SARNA X60301 M.tuberculosis gene for 10Sa RNA. Ends changed since first submission (-239 nt).;logic_name=ena_misc_rna -Chromosome ena gene 3468413 3469264 . - . ID=gene:Rv3099c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3099c;logic_name=ena +Chromosome ena_misc_rna biological_region 3467967 3468334 . - . external_name=ssr%2C match to EM_BA:MT10SARNA X60301 M.tuberculosis gene for 10Sa RNA. Ends changed since first submission (-239 nt).;logic_name=ena_misc_rna +Chromosome ena gene 3468413 3469264 . - . ID=gene:Rv3099c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3099c;logic_name=ena Chromosome ena mRNA 3468413 3469264 . - . ID=transcript:Rv3099c;Parent=gene:Rv3099c;biotype=protein_coding;transcript_id=Rv3099c Chromosome ena exon 3468413 3469264 . - . Parent=transcript:Rv3099c;Name=Rv3099c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3099c-1;rank=1 Chromosome ena CDS 3468413 3469264 . - 0 ID=CDS:Rv3099c;Parent=transcript:Rv3099c;protein_id=Rv3099c ### -Chromosome ena gene 3469301 3469783 . - . ID=gene:Rv3100c;Name=smpB;biotype=protein_coding;description=Probable SSRA-binding protein SmpB;gene_id=Rv3100c;logic_name=ena +Chromosome ena gene 3469301 3469783 . - . ID=gene:Rv3100c;Name=smpB;biotype=protein_coding;description=Probable SSRA-binding protein SmpB;gene_id=Rv3100c;logic_name=ena Chromosome ena mRNA 3469301 3469783 . - . ID=transcript:Rv3100c;Parent=gene:Rv3100c;Name=smpB-1;biotype=protein_coding;transcript_id=Rv3100c Chromosome ena exon 3469301 3469783 . - . Parent=transcript:Rv3100c;Name=Rv3100c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3100c-1;rank=1 Chromosome ena CDS 3469301 3469783 . - 0 ID=CDS:Rv3100c;Parent=transcript:Rv3100c;protein_id=Rv3100c ### -Chromosome ena gene 3469786 3470679 . - . ID=gene:Rv3101c;Name=ftsX;biotype=protein_coding;description=Putative cell division protein FtsX (septation component-transport integral membrane protein ABC transporter);gene_id=Rv3101c;logic_name=ena +Chromosome ena gene 3469786 3470679 . - . ID=gene:Rv3101c;Name=ftsX;biotype=protein_coding;description=Putative cell division protein FtsX (septation component-transport integral membrane protein ABC transporter);gene_id=Rv3101c;logic_name=ena Chromosome ena mRNA 3469786 3470679 . - . ID=transcript:Rv3101c;Parent=gene:Rv3101c;Name=ftsX-1;biotype=protein_coding;transcript_id=Rv3101c Chromosome ena exon 3469786 3470679 . - . Parent=transcript:Rv3101c;Name=Rv3101c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3101c-1;rank=1 Chromosome ena CDS 3469786 3470679 . - 0 ID=CDS:Rv3101c;Parent=transcript:Rv3101c;protein_id=Rv3101c ### -Chromosome ena gene 3470680 3471369 . - . ID=gene:Rv3102c;Name=ftsE;biotype=protein_coding;description=Putative cell division ATP-binding protein FtsE (septation component-transport ATP-binding protein ABC transporter);gene_id=Rv3102c;logic_name=ena +Chromosome ena gene 3470680 3471369 . - . ID=gene:Rv3102c;Name=ftsE;biotype=protein_coding;description=Putative cell division ATP-binding protein FtsE (septation component-transport ATP-binding protein ABC transporter);gene_id=Rv3102c;logic_name=ena Chromosome ena mRNA 3470680 3471369 . - . ID=transcript:Rv3102c;Parent=gene:Rv3102c;Name=ftsE-1;biotype=protein_coding;transcript_id=Rv3102c Chromosome ena exon 3470680 3471369 . - . Parent=transcript:Rv3102c;Name=Rv3102c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3102c-1;rank=1 Chromosome ena CDS 3470680 3471369 . - 0 ID=CDS:Rv3102c;Parent=transcript:Rv3102c;protein_id=Rv3102c ### -Chromosome ena gene 3471413 3471850 . - . ID=gene:Rv3103c;biotype=protein_coding;description=Hypothetical proline-rich protein;gene_id=Rv3103c;logic_name=ena +Chromosome ena gene 3471413 3471850 . - . ID=gene:Rv3103c;biotype=protein_coding;description=Hypothetical proline-rich protein;gene_id=Rv3103c;logic_name=ena Chromosome ena mRNA 3471413 3471850 . - . ID=transcript:Rv3103c;Parent=gene:Rv3103c;biotype=protein_coding;transcript_id=Rv3103c Chromosome ena exon 3471413 3471850 . - . Parent=transcript:Rv3103c;Name=Rv3103c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3103c-1;rank=1 Chromosome ena CDS 3471413 3471850 . - 0 ID=CDS:Rv3103c;Parent=transcript:Rv3103c;protein_id=Rv3103c ### -Chromosome ena gene 3471852 3472778 . - . ID=gene:Rv3104c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3104c;logic_name=ena +Chromosome ena gene 3471852 3472778 . - . ID=gene:Rv3104c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3104c;logic_name=ena Chromosome ena mRNA 3471852 3472778 . - . ID=transcript:Rv3104c;Parent=gene:Rv3104c;biotype=protein_coding;transcript_id=Rv3104c Chromosome ena exon 3471852 3472778 . - . Parent=transcript:Rv3104c;Name=Rv3104c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3104c-1;rank=1 Chromosome ena CDS 3471852 3472778 . - 0 ID=CDS:Rv3104c;Parent=transcript:Rv3104c;protein_id=Rv3104c ### -Chromosome ena gene 3472768 3473904 . - . ID=gene:Rv3105c;Name=prfB;biotype=protein_coding;description=Probable peptide chain release factor 2 PrfB (RF-2);gene_id=Rv3105c;logic_name=ena +Chromosome ena gene 3472768 3473904 . - . ID=gene:Rv3105c;Name=prfB;biotype=protein_coding;description=Probable peptide chain release factor 2 PrfB (RF-2);gene_id=Rv3105c;logic_name=ena Chromosome ena mRNA 3472768 3473904 . - . ID=transcript:Rv3105c;Parent=gene:Rv3105c;Name=prfB-1;biotype=protein_coding;transcript_id=Rv3105c Chromosome ena exon 3472768 3473904 . - . Parent=transcript:Rv3105c;Name=Rv3105c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3105c-1;rank=1 Chromosome ena CDS 3472768 3473904 . - 0 ID=CDS:Rv3105c;Parent=transcript:Rv3105c;protein_id=Rv3105c ### -Chromosome ena gene 3474007 3475377 . + . ID=gene:Rv3106;Name=fprA;biotype=protein_coding;description=NADPH:adrenodoxin oxidoreductase FprA (NADPH-ferredoxin reductase);gene_id=Rv3106;logic_name=ena +Chromosome ena gene 3474007 3475377 . + . ID=gene:Rv3106;Name=fprA;biotype=protein_coding;description=NADPH:adrenodoxin oxidoreductase FprA (NADPH-ferredoxin reductase);gene_id=Rv3106;logic_name=ena Chromosome ena mRNA 3474007 3475377 . + . ID=transcript:Rv3106;Parent=gene:Rv3106;Name=fprA-1;biotype=protein_coding;transcript_id=Rv3106 Chromosome ena exon 3474007 3475377 . + . Parent=transcript:Rv3106;Name=Rv3106-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3106-1;rank=1 Chromosome ena CDS 3474007 3475377 . + 0 ID=CDS:Rv3106;Parent=transcript:Rv3106;protein_id=Rv3106 ### -Chromosome ena gene 3475378 3476961 . - . ID=gene:Rv3107c;Name=agpS;biotype=protein_coding;description=Possible alkyldihydroxyacetonephosphate synthase AgpS (alkyl-DHAP synthase) (alkylglycerone-phosphate synthase);gene_id=Rv3107c;logic_name=ena +Chromosome ena gene 3475378 3476961 . - . ID=gene:Rv3107c;Name=agpS;biotype=protein_coding;description=Possible alkyldihydroxyacetonephosphate synthase AgpS (alkyl-DHAP synthase) (alkylglycerone-phosphate synthase);gene_id=Rv3107c;logic_name=ena Chromosome ena mRNA 3475378 3476961 . - . ID=transcript:Rv3107c;Parent=gene:Rv3107c;Name=agpS-1;biotype=protein_coding;transcript_id=Rv3107c Chromosome ena exon 3475378 3476961 . - . Parent=transcript:Rv3107c;Name=Rv3107c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3107c-1;rank=1 Chromosome ena CDS 3475378 3476961 . - 0 ID=CDS:Rv3107c;Parent=transcript:Rv3107c;protein_id=Rv3107c ### -Chromosome ena gene 3477060 3477500 . + . ID=gene:Rv3108;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3108;logic_name=ena +Chromosome ena gene 3477060 3477500 . + . ID=gene:Rv3108;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3108;logic_name=ena Chromosome ena mRNA 3477060 3477500 . + . ID=transcript:Rv3108;Parent=gene:Rv3108;biotype=protein_coding;transcript_id=Rv3108 Chromosome ena exon 3477060 3477500 . + . Parent=transcript:Rv3108;Name=Rv3108-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3108-1;rank=1 Chromosome ena CDS 3477060 3477500 . + 0 ID=CDS:Rv3108;Parent=transcript:Rv3108;protein_id=Rv3108 ### -Chromosome ena gene 3477649 3478728 . + . ID=gene:Rv3109;Name=moaA1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein A MoaA1;gene_id=Rv3109;logic_name=ena +Chromosome ena gene 3477649 3478728 . + . ID=gene:Rv3109;Name=moaA1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein A MoaA1;gene_id=Rv3109;logic_name=ena Chromosome ena mRNA 3477649 3478728 . + . ID=transcript:Rv3109;Parent=gene:Rv3109;Name=moaA1-1;biotype=protein_coding;transcript_id=Rv3109 Chromosome ena exon 3477649 3478728 . + . Parent=transcript:Rv3109;Name=Rv3109-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3109-1;rank=1 Chromosome ena CDS 3477649 3478728 . + 0 ID=CDS:Rv3109;Parent=transcript:Rv3109;protein_id=Rv3109 ### -Chromosome ena gene 3478779 3479174 . + . ID=gene:Rv3110;Name=moaB1;biotype=protein_coding;description=Probable pterin-4-alpha-carbinolamine dehydratase MoaB1 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv3110;logic_name=ena +Chromosome ena gene 3478779 3479174 . + . ID=gene:Rv3110;Name=moaB1;biotype=protein_coding;description=Probable pterin-4-alpha-carbinolamine dehydratase MoaB1 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv3110;logic_name=ena Chromosome ena mRNA 3478779 3479174 . + . ID=transcript:Rv3110;Parent=gene:Rv3110;Name=moaB1-1;biotype=protein_coding;transcript_id=Rv3110 Chromosome ena exon 3478779 3479174 . + . Parent=transcript:Rv3110;Name=Rv3110-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3110-1;rank=1 Chromosome ena CDS 3478779 3479174 . + 0 ID=CDS:Rv3110;Parent=transcript:Rv3110;protein_id=Rv3110 ### -Chromosome ena gene 3479171 3479683 . + . ID=gene:Rv3111;Name=moaC1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C MoaC1;gene_id=Rv3111;logic_name=ena +Chromosome ena gene 3479171 3479683 . + . ID=gene:Rv3111;Name=moaC1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C MoaC1;gene_id=Rv3111;logic_name=ena Chromosome ena mRNA 3479171 3479683 . + . ID=transcript:Rv3111;Parent=gene:Rv3111;Name=moaC1-1;biotype=protein_coding;transcript_id=Rv3111 Chromosome ena exon 3479171 3479683 . + . Parent=transcript:Rv3111;Name=Rv3111-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3111-1;rank=1 Chromosome ena CDS 3479171 3479683 . + 0 ID=CDS:Rv3111;Parent=transcript:Rv3111;protein_id=Rv3111 ### -Chromosome ena gene 3479700 3479951 . + . ID=gene:Rv3112;Name=moaD1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein D MoaD1 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor%2C subunit 1);gene_id=Rv3112;logic_name=ena +Chromosome ena gene 3479700 3479951 . + . ID=gene:Rv3112;Name=moaD1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein D MoaD1 (molybdopterin converting factor small subunit) (molybdopterin [MPT] converting factor%2C subunit 1);gene_id=Rv3112;logic_name=ena Chromosome ena mRNA 3479700 3479951 . + . ID=transcript:Rv3112;Parent=gene:Rv3112;Name=moaD1-1;biotype=protein_coding;transcript_id=Rv3112 Chromosome ena exon 3479700 3479951 . + . Parent=transcript:Rv3112;Name=Rv3112-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3112-1;rank=1 Chromosome ena CDS 3479700 3479951 . + 0 ID=CDS:Rv3112;Parent=transcript:Rv3112;protein_id=Rv3112 ### -Chromosome ena gene 3480074 3480742 . + . ID=gene:Rv3113;biotype=protein_coding;description=Possible phosphatase;gene_id=Rv3113;logic_name=ena +Chromosome ena gene 3480074 3480742 . + . ID=gene:Rv3113;biotype=protein_coding;description=Possible phosphatase;gene_id=Rv3113;logic_name=ena Chromosome ena mRNA 3480074 3480742 . + . ID=transcript:Rv3113;Parent=gene:Rv3113;biotype=protein_coding;transcript_id=Rv3113 Chromosome ena exon 3480074 3480742 . + . Parent=transcript:Rv3113;Name=Rv3113-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3113-1;rank=1 Chromosome ena CDS 3480074 3480742 . + 0 ID=CDS:Rv3113;Parent=transcript:Rv3113;protein_id=Rv3113 ### -Chromosome ena gene 3480759 3481289 . + . ID=gene:Rv3114;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3114;logic_name=ena +Chromosome ena gene 3480759 3481289 . + . ID=gene:Rv3114;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3114;logic_name=ena Chromosome ena mRNA 3480759 3481289 . + . ID=transcript:Rv3114;Parent=gene:Rv3114;biotype=protein_coding;transcript_id=Rv3114 Chromosome ena exon 3480759 3481289 . + . Parent=transcript:Rv3114;Name=Rv3114-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3114-1;rank=1 Chromosome ena CDS 3480759 3481289 . + 0 ID=CDS:Rv3114;Parent=transcript:Rv3114;protein_id=Rv3114 ### -Chromosome ena_mobile_element biological_region 3481399 3482722 . + . external_name=IS1081-6%2C len: 1324 nt. Insertion sequence IS1081. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 3481451 3482698 . + . ID=gene:Rv3115;biotype=protein_coding;description=Probable transposase;gene_id=Rv3115;logic_name=ena +Chromosome ena_mobile_element biological_region 3481399 3482722 . + . external_name=IS1081-6%2C len: 1324 nt. Insertion sequence IS1081. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 3481451 3482698 . + . ID=gene:Rv3115;biotype=protein_coding;description=Probable transposase;gene_id=Rv3115;logic_name=ena Chromosome ena mRNA 3481451 3482698 . + . ID=transcript:Rv3115;Parent=gene:Rv3115;biotype=protein_coding;transcript_id=Rv3115 Chromosome ena exon 3481451 3482698 . + . Parent=transcript:Rv3115;Name=Rv3115-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3115-1;rank=1 Chromosome ena CDS 3481451 3482698 . + 0 ID=CDS:Rv3115;Parent=transcript:Rv3115;protein_id=Rv3115 ### -Chromosome ena gene 3482776 3483945 . + . ID=gene:Rv3116;Name=moeB2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein MoeB2 (MPT-synthase sulfurylase) (molybdopterin synthase sulphurylase);gene_id=Rv3116;logic_name=ena +Chromosome ena gene 3482776 3483945 . + . ID=gene:Rv3116;Name=moeB2;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein MoeB2 (MPT-synthase sulfurylase) (molybdopterin synthase sulphurylase);gene_id=Rv3116;logic_name=ena Chromosome ena mRNA 3482776 3483945 . + . ID=transcript:Rv3116;Parent=gene:Rv3116;Name=moeB2-1;biotype=protein_coding;transcript_id=Rv3116 Chromosome ena exon 3482776 3483945 . + . Parent=transcript:Rv3116;Name=Rv3116-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3116-1;rank=1 Chromosome ena CDS 3482776 3483945 . + 0 ID=CDS:Rv3116;Parent=transcript:Rv3116;protein_id=Rv3116 ### -Chromosome ena gene 3483974 3484807 . + . ID=gene:Rv3117;Name=cysA3;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase CysA3 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv3117;logic_name=ena +Chromosome ena gene 3483974 3484807 . + . ID=gene:Rv3117;Name=cysA3;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase CysA3 (rhodanese-like protein) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv3117;logic_name=ena Chromosome ena mRNA 3483974 3484807 . + . ID=transcript:Rv3117;Parent=gene:Rv3117;Name=cysA3-1;biotype=protein_coding;transcript_id=Rv3117 Chromosome ena exon 3483974 3484807 . + . Parent=transcript:Rv3117;Name=Rv3117-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3117-1;rank=1 Chromosome ena CDS 3483974 3484807 . + 0 ID=CDS:Rv3117;Parent=transcript:Rv3117;protein_id=Rv3117 ### -Chromosome ena gene 3484809 3485111 . + . ID=gene:Rv3118;Name=sseC1;biotype=protein_coding;description=Conserved hypothetical protein SseC1;gene_id=Rv3118;logic_name=ena +Chromosome ena gene 3484809 3485111 . + . ID=gene:Rv3118;Name=sseC1;biotype=protein_coding;description=Conserved hypothetical protein SseC1;gene_id=Rv3118;logic_name=ena Chromosome ena mRNA 3484809 3485111 . + . ID=transcript:Rv3118;Parent=gene:Rv3118;Name=sseC1-1;biotype=protein_coding;transcript_id=Rv3118 Chromosome ena exon 3484809 3485111 . + . Parent=transcript:Rv3118;Name=Rv3118-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3118-1;rank=1 Chromosome ena CDS 3484809 3485111 . + 0 ID=CDS:Rv3118;Parent=transcript:Rv3118;protein_id=Rv3118 ### -Chromosome ena gene 3485132 3485575 . + . ID=gene:Rv3119;Name=moaE1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein E MoaE1 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor%2C subunit 2);gene_id=Rv3119;logic_name=ena +Chromosome ena gene 3485132 3485575 . + . ID=gene:Rv3119;Name=moaE1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein E MoaE1 (molybdopterin converting factor large subunit) (molybdopterin [MPT] converting factor%2C subunit 2);gene_id=Rv3119;logic_name=ena Chromosome ena mRNA 3485132 3485575 . + . ID=transcript:Rv3119;Parent=gene:Rv3119;Name=moaE1-1;biotype=protein_coding;transcript_id=Rv3119 Chromosome ena exon 3485132 3485575 . + . Parent=transcript:Rv3119;Name=Rv3119-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3119-1;rank=1 Chromosome ena CDS 3485132 3485575 . + 0 ID=CDS:Rv3119;Parent=transcript:Rv3119;protein_id=Rv3119 ### -Chromosome ena gene 3485572 3486174 . + . ID=gene:Rv3120;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3120;logic_name=ena +Chromosome ena gene 3485572 3486174 . + . ID=gene:Rv3120;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3120;logic_name=ena Chromosome ena mRNA 3485572 3486174 . + . ID=transcript:Rv3120;Parent=gene:Rv3120;biotype=protein_coding;transcript_id=Rv3120 Chromosome ena exon 3485572 3486174 . + . Parent=transcript:Rv3120;Name=Rv3120-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3120-1;rank=1 Chromosome ena CDS 3485572 3486174 . + 0 ID=CDS:Rv3120;Parent=transcript:Rv3120;protein_id=Rv3120 ### -Chromosome ena gene 3486509 3487711 . + . ID=gene:Rv3121;Name=cyp141;biotype=protein_coding;description=Probable cytochrome P450 141 Cyp141;gene_id=Rv3121;logic_name=ena +Chromosome ena gene 3486509 3487711 . + . ID=gene:Rv3121;Name=cyp141;biotype=protein_coding;description=Probable cytochrome P450 141 Cyp141;gene_id=Rv3121;logic_name=ena Chromosome ena mRNA 3486509 3487711 . + . ID=transcript:Rv3121;Parent=gene:Rv3121;Name=cyp141-1;biotype=protein_coding;transcript_id=Rv3121 Chromosome ena exon 3486509 3487711 . + . Parent=transcript:Rv3121;Name=Rv3121-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3121-1;rank=1 Chromosome ena CDS 3486509 3487711 . + 0 ID=CDS:Rv3121;Parent=transcript:Rv3121;protein_id=Rv3121 ### -Chromosome ena gene 3488089 3488559 . + . ID=gene:Rv3122;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3122;logic_name=ena +Chromosome ena gene 3488089 3488559 . + . ID=gene:Rv3122;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3122;logic_name=ena Chromosome ena mRNA 3488089 3488559 . + . ID=transcript:Rv3122;Parent=gene:Rv3122;biotype=protein_coding;transcript_id=Rv3122 Chromosome ena exon 3488089 3488559 . + . Parent=transcript:Rv3122;Name=Rv3122-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3122-1;rank=1 Chromosome ena CDS 3488089 3488559 . + 0 ID=CDS:Rv3122;Parent=transcript:Rv3122;protein_id=Rv3122 ### -Chromosome ena gene 3488569 3489063 . + . ID=gene:Rv3123;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3123;logic_name=ena +Chromosome ena gene 3488569 3489063 . + . ID=gene:Rv3123;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3123;logic_name=ena Chromosome ena mRNA 3488569 3489063 . + . ID=transcript:Rv3123;Parent=gene:Rv3123;biotype=protein_coding;transcript_id=Rv3123 Chromosome ena exon 3488569 3489063 . + . Parent=transcript:Rv3123;Name=Rv3123-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3123-1;rank=1 Chromosome ena CDS 3488569 3489063 . + 0 ID=CDS:Rv3123;Parent=transcript:Rv3123;protein_id=Rv3123 ### -Chromosome ena gene 3489506 3490375 . + . ID=gene:Rv3124;Name=moaR1;biotype=protein_coding;description=Transcriptional regulatory protein MoaR1;gene_id=Rv3124;logic_name=ena +Chromosome ena gene 3489506 3490375 . + . ID=gene:Rv3124;Name=moaR1;biotype=protein_coding;description=Transcriptional regulatory protein MoaR1;gene_id=Rv3124;logic_name=ena Chromosome ena mRNA 3489506 3490375 . + . ID=transcript:Rv3124;Parent=gene:Rv3124;Name=moaR1-1;biotype=protein_coding;transcript_id=Rv3124 Chromosome ena exon 3489506 3490375 . + . Parent=transcript:Rv3124;Name=Rv3124-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3124-1;rank=1 Chromosome ena CDS 3489506 3490375 . + 0 ID=CDS:Rv3124;Parent=transcript:Rv3124;protein_id=Rv3124 ### -Chromosome ena gene 3490476 3491651 . - . ID=gene:Rv3125c;Name=PPE49;biotype=protein_coding;description=PPE family protein PPE49;gene_id=Rv3125c;logic_name=ena +Chromosome ena gene 3490476 3491651 . - . ID=gene:Rv3125c;Name=PPE49;biotype=protein_coding;description=PPE family protein PPE49;gene_id=Rv3125c;logic_name=ena Chromosome ena mRNA 3490476 3491651 . - . ID=transcript:Rv3125c;Parent=gene:Rv3125c;Name=PPE49-1;biotype=protein_coding;transcript_id=Rv3125c Chromosome ena exon 3490476 3491651 . - . Parent=transcript:Rv3125c;Name=Rv3125c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3125c-1;rank=1 Chromosome ena CDS 3490476 3491651 . - 0 ID=CDS:Rv3125c;Parent=transcript:Rv3125c;protein_id=Rv3125c ### -Chromosome ena gene 3491808 3492122 . - . ID=gene:Rv3126c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3126c;logic_name=ena +Chromosome ena gene 3491808 3492122 . - . ID=gene:Rv3126c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3126c;logic_name=ena Chromosome ena mRNA 3491808 3492122 . - . ID=transcript:Rv3126c;Parent=gene:Rv3126c;biotype=protein_coding;transcript_id=Rv3126c Chromosome ena exon 3491808 3492122 . - . Parent=transcript:Rv3126c;Name=Rv3126c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3126c-1;rank=1 Chromosome ena CDS 3491808 3492122 . - 0 ID=CDS:Rv3126c;Parent=transcript:Rv3126c;protein_id=Rv3126c ### -Chromosome ena gene 3492147 3493181 . + . ID=gene:Rv3127;biotype=protein_coding;description=Conserved protein;gene_id=Rv3127;logic_name=ena +Chromosome ena gene 3492147 3493181 . + . ID=gene:Rv3127;biotype=protein_coding;description=Conserved protein;gene_id=Rv3127;logic_name=ena Chromosome ena mRNA 3492147 3493181 . + . ID=transcript:Rv3127;Parent=gene:Rv3127;biotype=protein_coding;transcript_id=Rv3127 Chromosome ena exon 3492147 3493181 . + . Parent=transcript:Rv3127;Name=Rv3127-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3127-1;rank=1 Chromosome ena CDS 3492147 3493181 . + 0 ID=CDS:Rv3127;Parent=transcript:Rv3127;protein_id=Rv3127 ### -Chromosome ena pseudogene 3493168 3494181 . - . ID=gene:Rv3128c;biotype=pseudogene;description=Conserved hypothetical protein;gene_id=Rv3128c;logic_name=ena +Chromosome ena pseudogene 3493168 3494181 . - . ID=gene:Rv3128c;biotype=pseudogene;description=Conserved hypothetical protein;gene_id=Rv3128c;logic_name=ena Chromosome ena pseudogene 3493168 3494181 . - . ID=transcript:Rv3128c;Parent=gene:Rv3128c;biotype=pseudogene;transcript_id=Rv3128c Chromosome ena exon 3493168 3494181 . - . Parent=transcript:Rv3128c;Name=Rv3128c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3128c-1;rank=1 ### -Chromosome ena gene 3494660 3494992 . + . ID=gene:Rv3129;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3129;logic_name=ena +Chromosome ena gene 3494660 3494992 . + . ID=gene:Rv3129;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3129;logic_name=ena Chromosome ena mRNA 3494660 3494992 . + . ID=transcript:Rv3129;Parent=gene:Rv3129;biotype=protein_coding;transcript_id=Rv3129 Chromosome ena exon 3494660 3494992 . + . Parent=transcript:Rv3129;Name=Rv3129-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3129-1;rank=1 Chromosome ena CDS 3494660 3494992 . + 0 ID=CDS:Rv3129;Parent=transcript:Rv3129;protein_id=Rv3129 ### -Chromosome ena gene 3494975 3496366 . - . ID=gene:Rv3130c;Name=tgs1;biotype=protein_coding;description=Triacylglycerol synthase (diacylglycerol acyltransferase) Tgs1;gene_id=Rv3130c;logic_name=ena +Chromosome ena gene 3494975 3496366 . - . ID=gene:Rv3130c;Name=tgs1;biotype=protein_coding;description=Triacylglycerol synthase (diacylglycerol acyltransferase) Tgs1;gene_id=Rv3130c;logic_name=ena Chromosome ena mRNA 3494975 3496366 . - . ID=transcript:Rv3130c;Parent=gene:Rv3130c;Name=tgs1-1;biotype=protein_coding;transcript_id=Rv3130c Chromosome ena exon 3494975 3496366 . - . Parent=transcript:Rv3130c;Name=Rv3130c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3130c-1;rank=1 Chromosome ena CDS 3494975 3496366 . - 0 ID=CDS:Rv3130c;Parent=transcript:Rv3130c;protein_id=Rv3130c ### -Chromosome ena gene 3496551 3497549 . + . ID=gene:Rv3131;biotype=protein_coding;description=Conserved protein;gene_id=Rv3131;logic_name=ena +Chromosome ena gene 3496551 3497549 . + . ID=gene:Rv3131;biotype=protein_coding;description=Conserved protein;gene_id=Rv3131;logic_name=ena Chromosome ena mRNA 3496551 3497549 . + . ID=transcript:Rv3131;Parent=gene:Rv3131;biotype=protein_coding;transcript_id=Rv3131 Chromosome ena exon 3496551 3497549 . + . Parent=transcript:Rv3131;Name=Rv3131-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3131-1;rank=1 Chromosome ena CDS 3496551 3497549 . + 0 ID=CDS:Rv3131;Parent=transcript:Rv3131;protein_id=Rv3131 ### -Chromosome ena gene 3497529 3499265 . - . ID=gene:Rv3132c;Name=devS;biotype=protein_coding;description=Two component sensor histidine kinase DevS;gene_id=Rv3132c;logic_name=ena +Chromosome ena gene 3497529 3499265 . - . ID=gene:Rv3132c;Name=devS;biotype=protein_coding;description=Two component sensor histidine kinase DevS;gene_id=Rv3132c;logic_name=ena Chromosome ena mRNA 3497529 3499265 . - . ID=transcript:Rv3132c;Parent=gene:Rv3132c;Name=devS-1;biotype=protein_coding;transcript_id=Rv3132c Chromosome ena exon 3497529 3499265 . - . Parent=transcript:Rv3132c;Name=Rv3132c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3132c-1;rank=1 Chromosome ena CDS 3497529 3499265 . - 0 ID=CDS:Rv3132c;Parent=transcript:Rv3132c;protein_id=Rv3132c ### -Chromosome ena gene 3499262 3499915 . - . ID=gene:Rv3133c;Name=devR;biotype=protein_coding;description=Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family);gene_id=Rv3133c;logic_name=ena +Chromosome ena gene 3499262 3499915 . - . ID=gene:Rv3133c;Name=devR;biotype=protein_coding;description=Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family);gene_id=Rv3133c;logic_name=ena Chromosome ena mRNA 3499262 3499915 . - . ID=transcript:Rv3133c;Parent=gene:Rv3133c;Name=devR-1;biotype=protein_coding;transcript_id=Rv3133c Chromosome ena exon 3499262 3499915 . - . Parent=transcript:Rv3133c;Name=Rv3133c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3133c-1;rank=1 Chromosome ena CDS 3499262 3499915 . - 0 ID=CDS:Rv3133c;Parent=transcript:Rv3133c;protein_id=Rv3133c ### -Chromosome ena gene 3499943 3500749 . - . ID=gene:Rv3134c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv3134c;logic_name=ena +Chromosome ena gene 3499943 3500749 . - . ID=gene:Rv3134c;biotype=protein_coding;description=Universal stress protein family protein;gene_id=Rv3134c;logic_name=ena Chromosome ena mRNA 3499943 3500749 . - . ID=transcript:Rv3134c;Parent=gene:Rv3134c;biotype=protein_coding;transcript_id=Rv3134c Chromosome ena exon 3499943 3500749 . - . Parent=transcript:Rv3134c;Name=Rv3134c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3134c-1;rank=1 Chromosome ena CDS 3499943 3500749 . - 0 ID=CDS:Rv3134c;Parent=transcript:Rv3134c;protein_id=Rv3134c ### -Chromosome ena gene 3501334 3501732 . + . ID=gene:Rv3135;Name=PPE50;biotype=protein_coding;description=PPE family protein PPE50;gene_id=Rv3135;logic_name=ena +Chromosome ena gene 3501334 3501732 . + . ID=gene:Rv3135;Name=PPE50;biotype=protein_coding;description=PPE family protein PPE50;gene_id=Rv3135;logic_name=ena Chromosome ena mRNA 3501334 3501732 . + . ID=transcript:Rv3135;Parent=gene:Rv3135;Name=PPE50-1;biotype=protein_coding;transcript_id=Rv3135 Chromosome ena exon 3501334 3501732 . + . Parent=transcript:Rv3135;Name=Rv3135-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3135-1;rank=1 Chromosome ena CDS 3501334 3501732 . + 0 ID=CDS:Rv3135;Parent=transcript:Rv3135;protein_id=Rv3135 ### -Chromosome ena gene 3501794 3502936 . + . ID=gene:Rv3136;Name=PPE51;biotype=protein_coding;description=PPE family protein PPE51;gene_id=Rv3136;logic_name=ena +Chromosome ena gene 3501794 3502936 . + . ID=gene:Rv3136;Name=PPE51;biotype=protein_coding;description=PPE family protein PPE51;gene_id=Rv3136;logic_name=ena Chromosome ena mRNA 3501794 3502936 . + . ID=transcript:Rv3136;Parent=gene:Rv3136;Name=PPE51-1;biotype=protein_coding;transcript_id=Rv3136 Chromosome ena exon 3501794 3502936 . + . Parent=transcript:Rv3136;Name=Rv3136-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3136-1;rank=1 Chromosome ena CDS 3501794 3502936 . + 0 ID=CDS:Rv3136;Parent=transcript:Rv3136;protein_id=Rv3136 ### -Chromosome ena gene 3502945 3503277 . - . ID=gene:Rv3136A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3136A;logic_name=ena +Chromosome ena gene 3502945 3503277 . - . ID=gene:Rv3136A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3136A;logic_name=ena Chromosome ena mRNA 3502945 3503277 . - . ID=transcript:Rv3136A;Parent=gene:Rv3136A;biotype=protein_coding;transcript_id=Rv3136A Chromosome ena exon 3502945 3503277 . - . Parent=transcript:Rv3136A;Name=Rv3136A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3136A-1;rank=1 Chromosome ena CDS 3502945 3503277 . - 0 ID=CDS:Rv3136A;Parent=transcript:Rv3136A;protein_id=Rv3136A ### -Chromosome ena gene 3503393 3504175 . + . ID=gene:Rv3137;biotype=protein_coding;description=Probable monophosphatase;gene_id=Rv3137;logic_name=ena +Chromosome ena gene 3503393 3504175 . + . ID=gene:Rv3137;biotype=protein_coding;description=Probable monophosphatase;gene_id=Rv3137;logic_name=ena Chromosome ena mRNA 3503393 3504175 . + . ID=transcript:Rv3137;Parent=gene:Rv3137;biotype=protein_coding;transcript_id=Rv3137 Chromosome ena exon 3503393 3504175 . + . Parent=transcript:Rv3137;Name=Rv3137-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3137-1;rank=1 Chromosome ena CDS 3503393 3504175 . + 0 ID=CDS:Rv3137;Parent=transcript:Rv3137;protein_id=Rv3137 ### -Chromosome ena gene 3504195 3505283 . + . ID=gene:Rv3138;Name=pflA;biotype=protein_coding;description=Probable pyruvate formate lyase activating protein PflA (formate acetyltransferase activating enzyme) ([pyruvate formate-lyase] activating enzyme);gene_id=Rv3138;logic_name=ena +Chromosome ena gene 3504195 3505283 . + . ID=gene:Rv3138;Name=pflA;biotype=protein_coding;description=Probable pyruvate formate lyase activating protein PflA (formate acetyltransferase activating enzyme) ([pyruvate formate-lyase] activating enzyme);gene_id=Rv3138;logic_name=ena Chromosome ena mRNA 3504195 3505283 . + . ID=transcript:Rv3138;Parent=gene:Rv3138;Name=pflA-1;biotype=protein_coding;transcript_id=Rv3138 Chromosome ena exon 3504195 3505283 . + . Parent=transcript:Rv3138;Name=Rv3138-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3138-1;rank=1 Chromosome ena CDS 3504195 3505283 . + 0 ID=CDS:Rv3138;Parent=transcript:Rv3138;protein_id=Rv3138 ### -Chromosome ena gene 3505363 3506769 . + . ID=gene:Rv3139;Name=fadE24;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE24;gene_id=Rv3139;logic_name=ena +Chromosome ena gene 3505363 3506769 . + . ID=gene:Rv3139;Name=fadE24;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE24;gene_id=Rv3139;logic_name=ena Chromosome ena mRNA 3505363 3506769 . + . ID=transcript:Rv3139;Parent=gene:Rv3139;Name=fadE24-1;biotype=protein_coding;transcript_id=Rv3139 Chromosome ena exon 3505363 3506769 . + . Parent=transcript:Rv3139;Name=Rv3139-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3139-1;rank=1 Chromosome ena CDS 3505363 3506769 . + 0 ID=CDS:Rv3139;Parent=transcript:Rv3139;protein_id=Rv3139 ### -Chromosome ena gene 3506790 3507995 . + . ID=gene:Rv3140;Name=fadE23;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE23;gene_id=Rv3140;logic_name=ena +Chromosome ena gene 3506790 3507995 . + . ID=gene:Rv3140;Name=fadE23;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE23;gene_id=Rv3140;logic_name=ena Chromosome ena mRNA 3506790 3507995 . + . ID=transcript:Rv3140;Parent=gene:Rv3140;Name=fadE23-1;biotype=protein_coding;transcript_id=Rv3140 Chromosome ena exon 3506790 3507995 . + . Parent=transcript:Rv3140;Name=Rv3140-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3140-1;rank=1 Chromosome ena CDS 3506790 3507995 . + 0 ID=CDS:Rv3140;Parent=transcript:Rv3140;protein_id=Rv3140 ### -Chromosome ena gene 3508095 3509066 . + . ID=gene:Rv3141;Name=fadB4;biotype=protein_coding;description=Probable NADPH quinone oxidoreductase FadB4 (NADPH:quinone reductase) (zeta-crystallin);gene_id=Rv3141;logic_name=ena +Chromosome ena gene 3508095 3509066 . + . ID=gene:Rv3141;Name=fadB4;biotype=protein_coding;description=Probable NADPH quinone oxidoreductase FadB4 (NADPH:quinone reductase) (zeta-crystallin);gene_id=Rv3141;logic_name=ena Chromosome ena mRNA 3508095 3509066 . + . ID=transcript:Rv3141;Parent=gene:Rv3141;Name=fadB4-1;biotype=protein_coding;transcript_id=Rv3141 Chromosome ena exon 3508095 3509066 . + . Parent=transcript:Rv3141;Name=Rv3141-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3141-1;rank=1 Chromosome ena CDS 3508095 3509066 . + 0 ID=CDS:Rv3141;Parent=transcript:Rv3141;protein_id=Rv3141 ### -Chromosome ena gene 3509118 3509546 . - . ID=gene:Rv3142c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3142c;logic_name=ena +Chromosome ena gene 3509118 3509546 . - . ID=gene:Rv3142c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3142c;logic_name=ena Chromosome ena mRNA 3509118 3509546 . - . ID=transcript:Rv3142c;Parent=gene:Rv3142c;biotype=protein_coding;transcript_id=Rv3142c Chromosome ena exon 3509118 3509546 . - . Parent=transcript:Rv3142c;Name=Rv3142c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3142c-1;rank=1 Chromosome ena CDS 3509118 3509546 . - 0 ID=CDS:Rv3142c;Parent=transcript:Rv3142c;protein_id=Rv3142c ### -Chromosome ena gene 3509654 3510055 . + . ID=gene:Rv3143;biotype=protein_coding;description=Probable response regulator;gene_id=Rv3143;logic_name=ena +Chromosome ena gene 3509654 3510055 . + . ID=gene:Rv3143;biotype=protein_coding;description=Probable response regulator;gene_id=Rv3143;logic_name=ena Chromosome ena mRNA 3509654 3510055 . + . ID=transcript:Rv3143;Parent=gene:Rv3143;biotype=protein_coding;transcript_id=Rv3143 Chromosome ena exon 3509654 3510055 . + . Parent=transcript:Rv3143;Name=Rv3143-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3143-1;rank=1 Chromosome ena CDS 3509654 3510055 . + 0 ID=CDS:Rv3143;Parent=transcript:Rv3143;protein_id=Rv3143 ### -Chromosome ena gene 3510088 3511317 . - . ID=gene:Rv3144c;Name=PPE52;biotype=protein_coding;description=PPE family protein PPE52;gene_id=Rv3144c;logic_name=ena +Chromosome ena gene 3510088 3511317 . - . ID=gene:Rv3144c;Name=PPE52;biotype=protein_coding;description=PPE family protein PPE52;gene_id=Rv3144c;logic_name=ena Chromosome ena mRNA 3510088 3511317 . - . ID=transcript:Rv3144c;Parent=gene:Rv3144c;Name=PPE52-1;biotype=protein_coding;transcript_id=Rv3144c Chromosome ena exon 3510088 3511317 . - . Parent=transcript:Rv3144c;Name=Rv3144c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3144c-1;rank=1 Chromosome ena CDS 3510088 3511317 . - 0 ID=CDS:Rv3144c;Parent=transcript:Rv3144c;protein_id=Rv3144c ### -Chromosome ena gene 3511682 3512068 . + . ID=gene:Rv3145;Name=nuoA;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain A) NuoA (NADH-ubiquinone oxidoreductase chain A);gene_id=Rv3145;logic_name=ena +Chromosome ena gene 3511682 3512068 . + . ID=gene:Rv3145;Name=nuoA;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain A) NuoA (NADH-ubiquinone oxidoreductase chain A);gene_id=Rv3145;logic_name=ena Chromosome ena mRNA 3511682 3512068 . + . ID=transcript:Rv3145;Parent=gene:Rv3145;Name=nuoA-1;biotype=protein_coding;transcript_id=Rv3145 Chromosome ena exon 3511682 3512068 . + . Parent=transcript:Rv3145;Name=Rv3145-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3145-1;rank=1 Chromosome ena CDS 3511682 3512068 . + 0 ID=CDS:Rv3145;Parent=transcript:Rv3145;protein_id=Rv3145 ### -Chromosome ena gene 3512077 3512631 . + . ID=gene:Rv3146;Name=nuoB;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain B) NuoB (NADH-ubiquinone oxidoreductase chain B);gene_id=Rv3146;logic_name=ena +Chromosome ena gene 3512077 3512631 . + . ID=gene:Rv3146;Name=nuoB;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain B) NuoB (NADH-ubiquinone oxidoreductase chain B);gene_id=Rv3146;logic_name=ena Chromosome ena mRNA 3512077 3512631 . + . ID=transcript:Rv3146;Parent=gene:Rv3146;Name=nuoB-1;biotype=protein_coding;transcript_id=Rv3146 Chromosome ena exon 3512077 3512631 . + . Parent=transcript:Rv3146;Name=Rv3146-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3146-1;rank=1 Chromosome ena CDS 3512077 3512631 . + 0 ID=CDS:Rv3146;Parent=transcript:Rv3146;protein_id=Rv3146 ### -Chromosome ena gene 3512628 3513338 . + . ID=gene:Rv3147;Name=nuoC;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain C) NuoC (NADH-ubiquinone oxidoreductase chain C);gene_id=Rv3147;logic_name=ena +Chromosome ena gene 3512628 3513338 . + . ID=gene:Rv3147;Name=nuoC;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain C) NuoC (NADH-ubiquinone oxidoreductase chain C);gene_id=Rv3147;logic_name=ena Chromosome ena mRNA 3512628 3513338 . + . ID=transcript:Rv3147;Parent=gene:Rv3147;Name=nuoC-1;biotype=protein_coding;transcript_id=Rv3147 Chromosome ena exon 3512628 3513338 . + . Parent=transcript:Rv3147;Name=Rv3147-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3147-1;rank=1 Chromosome ena CDS 3512628 3513338 . + 0 ID=CDS:Rv3147;Parent=transcript:Rv3147;protein_id=Rv3147 ### -Chromosome ena gene 3513338 3514660 . + . ID=gene:Rv3148;Name=nuoD;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D);gene_id=Rv3148;logic_name=ena +Chromosome ena gene 3513338 3514660 . + . ID=gene:Rv3148;Name=nuoD;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D);gene_id=Rv3148;logic_name=ena Chromosome ena mRNA 3513338 3514660 . + . ID=transcript:Rv3148;Parent=gene:Rv3148;Name=nuoD-1;biotype=protein_coding;transcript_id=Rv3148 Chromosome ena exon 3513338 3514660 . + . Parent=transcript:Rv3148;Name=Rv3148-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3148-1;rank=1 Chromosome ena CDS 3513338 3514660 . + 0 ID=CDS:Rv3148;Parent=transcript:Rv3148;protein_id=Rv3148 ### -Chromosome ena gene 3514657 3515415 . + . ID=gene:Rv3149;Name=nuoE;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain E) NuoE (NADH-ubiquinone oxidoreductase chain E);gene_id=Rv3149;logic_name=ena +Chromosome ena gene 3514657 3515415 . + . ID=gene:Rv3149;Name=nuoE;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain E) NuoE (NADH-ubiquinone oxidoreductase chain E);gene_id=Rv3149;logic_name=ena Chromosome ena mRNA 3514657 3515415 . + . ID=transcript:Rv3149;Parent=gene:Rv3149;Name=nuoE-1;biotype=protein_coding;transcript_id=Rv3149 Chromosome ena exon 3514657 3515415 . + . Parent=transcript:Rv3149;Name=Rv3149-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3149-1;rank=1 Chromosome ena CDS 3514657 3515415 . + 0 ID=CDS:Rv3149;Parent=transcript:Rv3149;protein_id=Rv3149 ### -Chromosome ena gene 3515412 3516749 . + . ID=gene:Rv3150;Name=nuoF;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F);gene_id=Rv3150;logic_name=ena +Chromosome ena gene 3515412 3516749 . + . ID=gene:Rv3150;Name=nuoF;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F);gene_id=Rv3150;logic_name=ena Chromosome ena mRNA 3515412 3516749 . + . ID=transcript:Rv3150;Parent=gene:Rv3150;Name=nuoF-1;biotype=protein_coding;transcript_id=Rv3150 Chromosome ena exon 3515412 3516749 . + . Parent=transcript:Rv3150;Name=Rv3150-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3150-1;rank=1 Chromosome ena CDS 3515412 3516749 . + 0 ID=CDS:Rv3150;Parent=transcript:Rv3150;protein_id=Rv3150 ### -Chromosome ena gene 3516746 3519166 . + . ID=gene:Rv3151;Name=nuoG;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G);gene_id=Rv3151;logic_name=ena +Chromosome ena gene 3516746 3519166 . + . ID=gene:Rv3151;Name=nuoG;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G);gene_id=Rv3151;logic_name=ena Chromosome ena mRNA 3516746 3519166 . + . ID=transcript:Rv3151;Parent=gene:Rv3151;Name=nuoG-1;biotype=protein_coding;transcript_id=Rv3151 Chromosome ena exon 3516746 3519166 . + . Parent=transcript:Rv3151;Name=Rv3151-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3151-1;rank=1 Chromosome ena CDS 3516746 3519166 . + 0 ID=CDS:Rv3151;Parent=transcript:Rv3151;protein_id=Rv3151 ### -Chromosome ena gene 3519282 3520514 . + . ID=gene:Rv3152;Name=nuoH;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H);gene_id=Rv3152;logic_name=ena +Chromosome ena gene 3519282 3520514 . + . ID=gene:Rv3152;Name=nuoH;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H);gene_id=Rv3152;logic_name=ena Chromosome ena mRNA 3519282 3520514 . + . ID=transcript:Rv3152;Parent=gene:Rv3152;Name=nuoH-1;biotype=protein_coding;transcript_id=Rv3152 Chromosome ena exon 3519282 3520514 . + . Parent=transcript:Rv3152;Name=Rv3152-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3152-1;rank=1 Chromosome ena CDS 3519282 3520514 . + 0 ID=CDS:Rv3152;Parent=transcript:Rv3152;protein_id=Rv3152 ### -Chromosome ena gene 3520507 3521142 . + . ID=gene:Rv3153;Name=nuoI;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I);gene_id=Rv3153;logic_name=ena +Chromosome ena gene 3520507 3521142 . + . ID=gene:Rv3153;Name=nuoI;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I);gene_id=Rv3153;logic_name=ena Chromosome ena mRNA 3520507 3521142 . + . ID=transcript:Rv3153;Parent=gene:Rv3153;Name=nuoI-1;biotype=protein_coding;transcript_id=Rv3153 Chromosome ena exon 3520507 3521142 . + . Parent=transcript:Rv3153;Name=Rv3153-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3153-1;rank=1 Chromosome ena CDS 3520507 3521142 . + 0 ID=CDS:Rv3153;Parent=transcript:Rv3153;protein_id=Rv3153 ### -Chromosome ena gene 3521139 3521927 . + . ID=gene:Rv3154;Name=nuoJ;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J);gene_id=Rv3154;logic_name=ena +Chromosome ena gene 3521139 3521927 . + . ID=gene:Rv3154;Name=nuoJ;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J);gene_id=Rv3154;logic_name=ena Chromosome ena mRNA 3521139 3521927 . + . ID=transcript:Rv3154;Parent=gene:Rv3154;Name=nuoJ-1;biotype=protein_coding;transcript_id=Rv3154 Chromosome ena exon 3521139 3521927 . + . Parent=transcript:Rv3154;Name=Rv3154-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3154-1;rank=1 Chromosome ena CDS 3521139 3521927 . + 0 ID=CDS:Rv3154;Parent=transcript:Rv3154;protein_id=Rv3154 ### -Chromosome ena gene 3521924 3522223 . + . ID=gene:Rv3155;Name=nuoK;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain K) NuoK (NADH-ubiquinone oxidoreductase chain K);gene_id=Rv3155;logic_name=ena +Chromosome ena gene 3521924 3522223 . + . ID=gene:Rv3155;Name=nuoK;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain K) NuoK (NADH-ubiquinone oxidoreductase chain K);gene_id=Rv3155;logic_name=ena Chromosome ena mRNA 3521924 3522223 . + . ID=transcript:Rv3155;Parent=gene:Rv3155;Name=nuoK-1;biotype=protein_coding;transcript_id=Rv3155 Chromosome ena exon 3521924 3522223 . + . Parent=transcript:Rv3155;Name=Rv3155-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3155-1;rank=1 Chromosome ena CDS 3521924 3522223 . + 0 ID=CDS:Rv3155;Parent=transcript:Rv3155;protein_id=Rv3155 ### -Chromosome ena gene 3522234 3524135 . + . ID=gene:Rv3156;Name=nuoL;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L);gene_id=Rv3156;logic_name=ena +Chromosome ena gene 3522234 3524135 . + . ID=gene:Rv3156;Name=nuoL;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L);gene_id=Rv3156;logic_name=ena Chromosome ena mRNA 3522234 3524135 . + . ID=transcript:Rv3156;Parent=gene:Rv3156;Name=nuoL-1;biotype=protein_coding;transcript_id=Rv3156 Chromosome ena exon 3522234 3524135 . + . Parent=transcript:Rv3156;Name=Rv3156-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3156-1;rank=1 Chromosome ena CDS 3522234 3524135 . + 0 ID=CDS:Rv3156;Parent=transcript:Rv3156;protein_id=Rv3156 ### -Chromosome ena gene 3524132 3525793 . + . ID=gene:Rv3157;Name=nuoM;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M);gene_id=Rv3157;logic_name=ena +Chromosome ena gene 3524132 3525793 . + . ID=gene:Rv3157;Name=nuoM;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M);gene_id=Rv3157;logic_name=ena Chromosome ena mRNA 3524132 3525793 . + . ID=transcript:Rv3157;Parent=gene:Rv3157;Name=nuoM-1;biotype=protein_coding;transcript_id=Rv3157 Chromosome ena exon 3524132 3525793 . + . Parent=transcript:Rv3157;Name=Rv3157-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3157-1;rank=1 Chromosome ena CDS 3524132 3525793 . + 0 ID=CDS:Rv3157;Parent=transcript:Rv3157;protein_id=Rv3157 ### -Chromosome ena gene 3525790 3527385 . + . ID=gene:Rv3158;Name=nuoN;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N);gene_id=Rv3158;logic_name=ena +Chromosome ena gene 3525790 3527385 . + . ID=gene:Rv3158;Name=nuoN;biotype=protein_coding;description=Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N);gene_id=Rv3158;logic_name=ena Chromosome ena mRNA 3525790 3527385 . + . ID=transcript:Rv3158;Parent=gene:Rv3158;Name=nuoN-1;biotype=protein_coding;transcript_id=Rv3158 Chromosome ena exon 3525790 3527385 . + . Parent=transcript:Rv3158;Name=Rv3158-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3158-1;rank=1 Chromosome ena CDS 3525790 3527385 . + 0 ID=CDS:Rv3158;Parent=transcript:Rv3158;protein_id=Rv3158 ### -Chromosome ena gene 3527391 3529163 . - . ID=gene:Rv3159c;Name=PPE53;biotype=protein_coding;description=PPE family protein PPE53;gene_id=Rv3159c;logic_name=ena +Chromosome ena gene 3527391 3529163 . - . ID=gene:Rv3159c;Name=PPE53;biotype=protein_coding;description=PPE family protein PPE53;gene_id=Rv3159c;logic_name=ena Chromosome ena mRNA 3527391 3529163 . - . ID=transcript:Rv3159c;Parent=gene:Rv3159c;Name=PPE53-1;biotype=protein_coding;transcript_id=Rv3159c Chromosome ena exon 3527391 3529163 . - . Parent=transcript:Rv3159c;Name=Rv3159c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3159c-1;rank=1 Chromosome ena CDS 3527391 3529163 . - 0 ID=CDS:Rv3159c;Parent=transcript:Rv3159c;protein_id=Rv3159c ### -Chromosome ena gene 3529338 3529979 . - . ID=gene:Rv3160c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3160c;logic_name=ena +Chromosome ena gene 3529338 3529979 . - . ID=gene:Rv3160c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3160c;logic_name=ena Chromosome ena mRNA 3529338 3529979 . - . ID=transcript:Rv3160c;Parent=gene:Rv3160c;biotype=protein_coding;transcript_id=Rv3160c Chromosome ena exon 3529338 3529979 . - . Parent=transcript:Rv3160c;Name=Rv3160c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3160c-1;rank=1 Chromosome ena CDS 3529338 3529979 . - 0 ID=CDS:Rv3160c;Parent=transcript:Rv3160c;protein_id=Rv3160c ### -Chromosome ena gene 3529990 3531138 . - . ID=gene:Rv3161c;biotype=protein_coding;description=Possible dioxygenase;gene_id=Rv3161c;logic_name=ena +Chromosome ena gene 3529990 3531138 . - . ID=gene:Rv3161c;biotype=protein_coding;description=Possible dioxygenase;gene_id=Rv3161c;logic_name=ena Chromosome ena mRNA 3529990 3531138 . - . ID=transcript:Rv3161c;Parent=gene:Rv3161c;biotype=protein_coding;transcript_id=Rv3161c Chromosome ena exon 3529990 3531138 . - . Parent=transcript:Rv3161c;Name=Rv3161c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3161c-1;rank=1 Chromosome ena CDS 3529990 3531138 . - 0 ID=CDS:Rv3161c;Parent=transcript:Rv3161c;protein_id=Rv3161c ### -Chromosome ena gene 3531208 3531645 . - . ID=gene:Rv3162c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv3162c;logic_name=ena +Chromosome ena gene 3531208 3531645 . - . ID=gene:Rv3162c;biotype=protein_coding;description=Possible integral membrane protein;gene_id=Rv3162c;logic_name=ena Chromosome ena mRNA 3531208 3531645 . - . ID=transcript:Rv3162c;Parent=gene:Rv3162c;biotype=protein_coding;transcript_id=Rv3162c Chromosome ena exon 3531208 3531645 . - . Parent=transcript:Rv3162c;Name=Rv3162c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3162c-1;rank=1 Chromosome ena CDS 3531208 3531645 . - 0 ID=CDS:Rv3162c;Parent=transcript:Rv3162c;protein_id=Rv3162c ### -Chromosome ena gene 3531642 3532913 . - . ID=gene:Rv3163c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv3163c;logic_name=ena +Chromosome ena gene 3531642 3532913 . - . ID=gene:Rv3163c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv3163c;logic_name=ena Chromosome ena mRNA 3531642 3532913 . - . ID=transcript:Rv3163c;Parent=gene:Rv3163c;biotype=protein_coding;transcript_id=Rv3163c Chromosome ena exon 3531642 3532913 . - . Parent=transcript:Rv3163c;Name=Rv3163c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3163c-1;rank=1 Chromosome ena CDS 3531642 3532913 . - 0 ID=CDS:Rv3163c;Parent=transcript:Rv3163c;protein_id=Rv3163c ### -Chromosome ena gene 3532943 3533905 . - . ID=gene:Rv3164c;Name=moxR3;biotype=protein_coding;description=Probable methanol dehydrogenase transcriptional regulatory protein MoxR3;gene_id=Rv3164c;logic_name=ena +Chromosome ena gene 3532943 3533905 . - . ID=gene:Rv3164c;Name=moxR3;biotype=protein_coding;description=Probable methanol dehydrogenase transcriptional regulatory protein MoxR3;gene_id=Rv3164c;logic_name=ena Chromosome ena mRNA 3532943 3533905 . - . ID=transcript:Rv3164c;Parent=gene:Rv3164c;Name=moxR3-1;biotype=protein_coding;transcript_id=Rv3164c Chromosome ena exon 3532943 3533905 . - . Parent=transcript:Rv3164c;Name=Rv3164c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3164c-1;rank=1 Chromosome ena CDS 3532943 3533905 . - 0 ID=CDS:Rv3164c;Parent=transcript:Rv3164c;protein_id=Rv3164c ### -Chromosome ena gene 3533913 3534395 . - . ID=gene:Rv3165c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3165c;logic_name=ena +Chromosome ena gene 3533913 3534395 . - . ID=gene:Rv3165c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3165c;logic_name=ena Chromosome ena mRNA 3533913 3534395 . - . ID=transcript:Rv3165c;Parent=gene:Rv3165c;biotype=protein_coding;transcript_id=Rv3165c Chromosome ena exon 3533913 3534395 . - . Parent=transcript:Rv3165c;Name=Rv3165c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3165c-1;rank=1 Chromosome ena CDS 3533913 3534395 . - 0 ID=CDS:Rv3165c;Parent=transcript:Rv3165c;protein_id=Rv3165c ### -Chromosome ena gene 3534392 3535351 . - . ID=gene:Rv3166c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3166c;logic_name=ena +Chromosome ena gene 3534392 3535351 . - . ID=gene:Rv3166c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3166c;logic_name=ena Chromosome ena mRNA 3534392 3535351 . - . ID=transcript:Rv3166c;Parent=gene:Rv3166c;biotype=protein_coding;transcript_id=Rv3166c Chromosome ena exon 3534392 3535351 . - . Parent=transcript:Rv3166c;Name=Rv3166c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3166c-1;rank=1 Chromosome ena CDS 3534392 3535351 . - 0 ID=CDS:Rv3166c;Parent=transcript:Rv3166c;protein_id=Rv3166c ### -Chromosome ena gene 3535431 3536057 . - . ID=gene:Rv3167c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3167c;logic_name=ena +Chromosome ena gene 3535431 3536057 . - . ID=gene:Rv3167c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3167c;logic_name=ena Chromosome ena mRNA 3535431 3536057 . - . ID=transcript:Rv3167c;Parent=gene:Rv3167c;biotype=protein_coding;transcript_id=Rv3167c Chromosome ena exon 3535431 3536057 . - . Parent=transcript:Rv3167c;Name=Rv3167c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3167c-1;rank=1 Chromosome ena CDS 3535431 3536057 . - 0 ID=CDS:Rv3167c;Parent=transcript:Rv3167c;protein_id=Rv3167c ### -Chromosome ena gene 3536102 3537238 . + . ID=gene:Rv3168;biotype=protein_coding;description=Putative aminoglycoside phosphotransferase;gene_id=Rv3168;logic_name=ena +Chromosome ena gene 3536102 3537238 . + . ID=gene:Rv3168;biotype=protein_coding;description=Putative aminoglycoside phosphotransferase;gene_id=Rv3168;logic_name=ena Chromosome ena mRNA 3536102 3537238 . + . ID=transcript:Rv3168;Parent=gene:Rv3168;biotype=protein_coding;transcript_id=Rv3168 Chromosome ena exon 3536102 3537238 . + . Parent=transcript:Rv3168;Name=Rv3168-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3168-1;rank=1 Chromosome ena CDS 3536102 3537238 . + 0 ID=CDS:Rv3168;Parent=transcript:Rv3168;protein_id=Rv3168 ### -Chromosome ena gene 3537238 3538362 . + . ID=gene:Rv3169;biotype=protein_coding;description=Conserved protein;gene_id=Rv3169;logic_name=ena +Chromosome ena gene 3537238 3538362 . + . ID=gene:Rv3169;biotype=protein_coding;description=Conserved protein;gene_id=Rv3169;logic_name=ena Chromosome ena mRNA 3537238 3538362 . + . ID=transcript:Rv3169;Parent=gene:Rv3169;biotype=protein_coding;transcript_id=Rv3169 Chromosome ena exon 3537238 3538362 . + . Parent=transcript:Rv3169;Name=Rv3169-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3169-1;rank=1 Chromosome ena CDS 3537238 3538362 . + 0 ID=CDS:Rv3169;Parent=transcript:Rv3169;protein_id=Rv3169 ### -Chromosome ena gene 3538505 3539851 . + . ID=gene:Rv3170;Name=aofH;biotype=protein_coding;description=Probable flavin-containing monoamine oxidase AofH (amine oxidase) (MAO);gene_id=Rv3170;logic_name=ena +Chromosome ena gene 3538505 3539851 . + . ID=gene:Rv3170;Name=aofH;biotype=protein_coding;description=Probable flavin-containing monoamine oxidase AofH (amine oxidase) (MAO);gene_id=Rv3170;logic_name=ena Chromosome ena mRNA 3538505 3539851 . + . ID=transcript:Rv3170;Parent=gene:Rv3170;Name=aofH-1;biotype=protein_coding;transcript_id=Rv3170 Chromosome ena exon 3538505 3539851 . + . Parent=transcript:Rv3170;Name=Rv3170-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3170-1;rank=1 Chromosome ena CDS 3538505 3539851 . + 0 ID=CDS:Rv3170;Parent=transcript:Rv3170;protein_id=Rv3170 ### -Chromosome ena gene 3539846 3540745 . - . ID=gene:Rv3171c;Name=hpx;biotype=protein_coding;description=Possible non-heme haloperoxidase Hpx;gene_id=Rv3171c;logic_name=ena +Chromosome ena gene 3539846 3540745 . - . ID=gene:Rv3171c;Name=hpx;biotype=protein_coding;description=Possible non-heme haloperoxidase Hpx;gene_id=Rv3171c;logic_name=ena Chromosome ena mRNA 3539846 3540745 . - . ID=transcript:Rv3171c;Parent=gene:Rv3171c;Name=hpx-1;biotype=protein_coding;transcript_id=Rv3171c Chromosome ena exon 3539846 3540745 . - . Parent=transcript:Rv3171c;Name=Rv3171c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3171c-1;rank=1 Chromosome ena CDS 3539846 3540745 . - 0 ID=CDS:Rv3171c;Parent=transcript:Rv3171c;protein_id=Rv3171c ### -Chromosome ena gene 3540882 3541364 . - . ID=gene:Rv3172c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3172c;logic_name=ena +Chromosome ena gene 3540882 3541364 . - . ID=gene:Rv3172c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3172c;logic_name=ena Chromosome ena mRNA 3540882 3541364 . - . ID=transcript:Rv3172c;Parent=gene:Rv3172c;biotype=protein_coding;transcript_id=Rv3172c Chromosome ena exon 3540882 3541364 . - . Parent=transcript:Rv3172c;Name=Rv3172c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3172c-1;rank=1 Chromosome ena CDS 3540882 3541364 . - 0 ID=CDS:Rv3172c;Parent=transcript:Rv3172c;protein_id=Rv3172c ### -Chromosome ena gene 3541443 3542045 . - . ID=gene:Rv3173c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv3173c;logic_name=ena +Chromosome ena gene 3541443 3542045 . - . ID=gene:Rv3173c;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR/AcrR-family);gene_id=Rv3173c;logic_name=ena Chromosome ena mRNA 3541443 3542045 . - . ID=transcript:Rv3173c;Parent=gene:Rv3173c;biotype=protein_coding;transcript_id=Rv3173c Chromosome ena exon 3541443 3542045 . - . Parent=transcript:Rv3173c;Name=Rv3173c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3173c-1;rank=1 Chromosome ena CDS 3541443 3542045 . - 0 ID=CDS:Rv3173c;Parent=transcript:Rv3173c;protein_id=Rv3173c ### -Chromosome ena gene 3542138 3542845 . + . ID=gene:Rv3174;biotype=protein_coding;description=Probable short-chain dehydrogenase/reductase;gene_id=Rv3174;logic_name=ena +Chromosome ena gene 3542138 3542845 . + . ID=gene:Rv3174;biotype=protein_coding;description=Probable short-chain dehydrogenase/reductase;gene_id=Rv3174;logic_name=ena Chromosome ena mRNA 3542138 3542845 . + . ID=transcript:Rv3174;Parent=gene:Rv3174;biotype=protein_coding;transcript_id=Rv3174 Chromosome ena exon 3542138 3542845 . + . Parent=transcript:Rv3174;Name=Rv3174-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3174-1;rank=1 Chromosome ena CDS 3542138 3542845 . + 0 ID=CDS:Rv3174;Parent=transcript:Rv3174;protein_id=Rv3174 ### -Chromosome ena gene 3542860 3544347 . + . ID=gene:Rv3175;biotype=protein_coding;description=Possible amidase (aminohydrolase);gene_id=Rv3175;logic_name=ena +Chromosome ena gene 3542860 3544347 . + . ID=gene:Rv3175;biotype=protein_coding;description=Possible amidase (aminohydrolase);gene_id=Rv3175;logic_name=ena Chromosome ena mRNA 3542860 3544347 . + . ID=transcript:Rv3175;Parent=gene:Rv3175;biotype=protein_coding;transcript_id=Rv3175 Chromosome ena exon 3542860 3544347 . + . Parent=transcript:Rv3175;Name=Rv3175-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3175-1;rank=1 Chromosome ena CDS 3542860 3544347 . + 0 ID=CDS:Rv3175;Parent=transcript:Rv3175;protein_id=Rv3175 ### -Chromosome ena gene 3544344 3545300 . - . ID=gene:Rv3176c;Name=mesT;biotype=protein_coding;description=Probable epoxide hydrolase MesT (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3176c;logic_name=ena +Chromosome ena gene 3544344 3545300 . - . ID=gene:Rv3176c;Name=mesT;biotype=protein_coding;description=Probable epoxide hydrolase MesT (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3176c;logic_name=ena Chromosome ena mRNA 3544344 3545300 . - . ID=transcript:Rv3176c;Parent=gene:Rv3176c;Name=mesT-1;biotype=protein_coding;transcript_id=Rv3176c Chromosome ena exon 3544344 3545300 . - . Parent=transcript:Rv3176c;Name=Rv3176c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3176c-1;rank=1 Chromosome ena CDS 3544344 3545300 . - 0 ID=CDS:Rv3176c;Parent=transcript:Rv3176c;protein_id=Rv3176c ### -Chromosome ena gene 3545447 3546307 . + . ID=gene:Rv3177;biotype=protein_coding;description=Possible peroxidase (non-haem peroxidase);gene_id=Rv3177;logic_name=ena +Chromosome ena gene 3545447 3546307 . + . ID=gene:Rv3177;biotype=protein_coding;description=Possible peroxidase (non-haem peroxidase);gene_id=Rv3177;logic_name=ena Chromosome ena mRNA 3545447 3546307 . + . ID=transcript:Rv3177;Parent=gene:Rv3177;biotype=protein_coding;transcript_id=Rv3177 Chromosome ena exon 3545447 3546307 . + . Parent=transcript:Rv3177;Name=Rv3177-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3177-1;rank=1 Chromosome ena CDS 3545447 3546307 . + 0 ID=CDS:Rv3177;Parent=transcript:Rv3177;protein_id=Rv3177 ### -Chromosome ena gene 3546438 3546797 . + . ID=gene:Rv3178;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3178;logic_name=ena +Chromosome ena gene 3546438 3546797 . + . ID=gene:Rv3178;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3178;logic_name=ena Chromosome ena mRNA 3546438 3546797 . + . ID=transcript:Rv3178;Parent=gene:Rv3178;biotype=protein_coding;transcript_id=Rv3178 Chromosome ena exon 3546438 3546797 . + . Parent=transcript:Rv3178;Name=Rv3178-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3178-1;rank=1 Chromosome ena CDS 3546438 3546797 . + 0 ID=CDS:Rv3178;Parent=transcript:Rv3178;protein_id=Rv3178 ### -Chromosome ena gene 3547618 3548907 . + . ID=gene:Rv3179;biotype=protein_coding;description=Conserved protein;gene_id=Rv3179;logic_name=ena +Chromosome ena gene 3547618 3548907 . + . ID=gene:Rv3179;biotype=protein_coding;description=Conserved protein;gene_id=Rv3179;logic_name=ena Chromosome ena mRNA 3547618 3548907 . + . ID=transcript:Rv3179;Parent=gene:Rv3179;biotype=protein_coding;transcript_id=Rv3179 Chromosome ena exon 3547618 3548907 . + . Parent=transcript:Rv3179;Name=Rv3179-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3179-1;rank=1 Chromosome ena CDS 3547618 3548907 . + 0 ID=CDS:Rv3179;Parent=transcript:Rv3179;protein_id=Rv3179 ### -Chromosome ena gene 3549254 3549688 . - . ID=gene:Rv3180c;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv3180c;logic_name=ena +Chromosome ena gene 3549254 3549688 . - . ID=gene:Rv3180c;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv3180c;logic_name=ena Chromosome ena mRNA 3549254 3549688 . - . ID=transcript:Rv3180c;Parent=gene:Rv3180c;biotype=protein_coding;transcript_id=Rv3180c Chromosome ena exon 3549254 3549688 . - . Parent=transcript:Rv3180c;Name=Rv3180c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3180c-1;rank=1 Chromosome ena CDS 3549254 3549688 . - 0 ID=CDS:Rv3180c;Parent=transcript:Rv3180c;protein_id=Rv3180c ### -Chromosome ena gene 3549691 3550143 . - . ID=gene:Rv3181c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3181c;logic_name=ena +Chromosome ena gene 3549691 3550143 . - . ID=gene:Rv3181c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3181c;logic_name=ena Chromosome ena mRNA 3549691 3550143 . - . ID=transcript:Rv3181c;Parent=gene:Rv3181c;biotype=protein_coding;transcript_id=Rv3181c Chromosome ena exon 3549691 3550143 . - . Parent=transcript:Rv3181c;Name=Rv3181c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3181c-1;rank=1 Chromosome ena CDS 3549691 3550143 . - 0 ID=CDS:Rv3181c;Parent=transcript:Rv3181c;protein_id=Rv3181c ### -Chromosome ena gene 3550374 3550718 . + . ID=gene:Rv3182;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3182;logic_name=ena +Chromosome ena gene 3550374 3550718 . + . ID=gene:Rv3182;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3182;logic_name=ena Chromosome ena mRNA 3550374 3550718 . + . ID=transcript:Rv3182;Parent=gene:Rv3182;biotype=protein_coding;transcript_id=Rv3182 Chromosome ena exon 3550374 3550718 . + . Parent=transcript:Rv3182;Name=Rv3182-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3182-1;rank=1 Chromosome ena CDS 3550374 3550718 . + 0 ID=CDS:Rv3182;Parent=transcript:Rv3182;protein_id=Rv3182 ### -Chromosome ena gene 3550715 3551044 . + . ID=gene:Rv3183;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3183;logic_name=ena +Chromosome ena gene 3550715 3551044 . + . ID=gene:Rv3183;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3183;logic_name=ena Chromosome ena mRNA 3550715 3551044 . + . ID=transcript:Rv3183;Parent=gene:Rv3183;biotype=protein_coding;transcript_id=Rv3183 Chromosome ena exon 3550715 3551044 . + . Parent=transcript:Rv3183;Name=Rv3183-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3183-1;rank=1 Chromosome ena CDS 3550715 3551044 . + 0 ID=CDS:Rv3183;Parent=transcript:Rv3183;protein_id=Rv3183 ### -Chromosome ena_mobile_element biological_region 3551230 3552584 . + . external_name=IS6110-12%2C len: 1355 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 3551281 3551607 . + . ID=gene:Rv3184;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3184;logic_name=ena +Chromosome ena_mobile_element biological_region 3551230 3552584 . + . external_name=IS6110-12%2C len: 1355 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 3551281 3551607 . + . ID=gene:Rv3184;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3184;logic_name=ena Chromosome ena mRNA 3551281 3551607 . + . ID=transcript:Rv3184;Parent=gene:Rv3184;biotype=protein_coding;transcript_id=Rv3184 Chromosome ena exon 3551281 3551607 . + . Parent=transcript:Rv3184;Name=Rv3184-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3184-1;rank=1 Chromosome ena CDS 3551281 3551607 . + 0 ID=CDS:Rv3184;Parent=transcript:Rv3184;protein_id=Rv3184 ### -Chromosome ena gene 3551556 3552542 . + . ID=gene:Rv3185;biotype=protein_coding;description=Probable transposase;gene_id=Rv3185;logic_name=ena +Chromosome ena gene 3551556 3552542 . + . ID=gene:Rv3185;biotype=protein_coding;description=Probable transposase;gene_id=Rv3185;logic_name=ena Chromosome ena mRNA 3551556 3552542 . + . ID=transcript:Rv3185;Parent=gene:Rv3185;biotype=protein_coding;transcript_id=Rv3185 Chromosome ena exon 3551556 3552542 . + . Parent=transcript:Rv3185;Name=Rv3185-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3185-1;rank=1 Chromosome ena CDS 3551556 3552542 . + 0 ID=CDS:Rv3185;Parent=transcript:Rv3185;protein_id=Rv3185 ### -Chromosome ena_mobile_element biological_region 3552713 3554067 . + . external_name=IS6110-13%2C len: 1355 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element -Chromosome ena gene 3552764 3553090 . + . ID=gene:Rv3186;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3186;logic_name=ena +Chromosome ena_mobile_element biological_region 3552713 3554067 . + . external_name=IS6110-13%2C len: 1355 nt. Insertion sequence IS6110. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena gene 3552764 3553090 . + . ID=gene:Rv3186;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3186;logic_name=ena Chromosome ena mRNA 3552764 3553090 . + . ID=transcript:Rv3186;Parent=gene:Rv3186;biotype=protein_coding;transcript_id=Rv3186 Chromosome ena exon 3552764 3553090 . + . Parent=transcript:Rv3186;Name=Rv3186-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3186-1;rank=1 Chromosome ena CDS 3552764 3553090 . + 0 ID=CDS:Rv3186;Parent=transcript:Rv3186;protein_id=Rv3186 ### -Chromosome ena gene 3553039 3554025 . + . ID=gene:Rv3187;biotype=protein_coding;description=Probable transposase;gene_id=Rv3187;logic_name=ena +Chromosome ena gene 3553039 3554025 . + . ID=gene:Rv3187;biotype=protein_coding;description=Probable transposase;gene_id=Rv3187;logic_name=ena Chromosome ena mRNA 3553039 3554025 . + . ID=transcript:Rv3187;Parent=gene:Rv3187;biotype=protein_coding;transcript_id=Rv3187 Chromosome ena exon 3553039 3554025 . + . Parent=transcript:Rv3187;Name=Rv3187-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3187-1;rank=1 Chromosome ena CDS 3553039 3554025 . + 0 ID=CDS:Rv3187;Parent=transcript:Rv3187;protein_id=Rv3187 ### -Chromosome ena gene 3554298 3554645 . + . ID=gene:Rv3188;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3188;logic_name=ena +Chromosome ena gene 3554298 3554645 . + . ID=gene:Rv3188;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3188;logic_name=ena Chromosome ena mRNA 3554298 3554645 . + . ID=transcript:Rv3188;Parent=gene:Rv3188;biotype=protein_coding;transcript_id=Rv3188 Chromosome ena exon 3554298 3554645 . + . Parent=transcript:Rv3188;Name=Rv3188-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3188-1;rank=1 Chromosome ena CDS 3554298 3554645 . + 0 ID=CDS:Rv3188;Parent=transcript:Rv3188;protein_id=Rv3188 ### -Chromosome ena gene 3554642 3555262 . + . ID=gene:Rv3189;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3189;logic_name=ena +Chromosome ena gene 3554642 3555262 . + . ID=gene:Rv3189;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3189;logic_name=ena Chromosome ena mRNA 3554642 3555262 . + . ID=transcript:Rv3189;Parent=gene:Rv3189;biotype=protein_coding;transcript_id=Rv3189 Chromosome ena exon 3554642 3555262 . + . Parent=transcript:Rv3189;Name=Rv3189-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3189-1;rank=1 Chromosome ena CDS 3554642 3555262 . + 0 ID=CDS:Rv3189;Parent=transcript:Rv3189;protein_id=Rv3189 ### -Chromosome ena gene 3555422 3556687 . - . ID=gene:Rv3190c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3190c;logic_name=ena +Chromosome ena gene 3555422 3556687 . - . ID=gene:Rv3190c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3190c;logic_name=ena Chromosome ena mRNA 3555422 3556687 . - . ID=transcript:Rv3190c;Parent=gene:Rv3190c;biotype=protein_coding;transcript_id=Rv3190c Chromosome ena exon 3555422 3556687 . - . Parent=transcript:Rv3190c;Name=Rv3190c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3190c-1;rank=1 Chromosome ena CDS 3555422 3556687 . - 0 ID=CDS:Rv3190c;Parent=transcript:Rv3190c;protein_id=Rv3190c ### -Chromosome ena gene 3556855 3557064 . + . ID=gene:Rv3190A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3190A;logic_name=ena +Chromosome ena gene 3556855 3557064 . + . ID=gene:Rv3190A;biotype=protein_coding;description=Conserved protein;gene_id=Rv3190A;logic_name=ena Chromosome ena mRNA 3556855 3557064 . + . ID=transcript:Rv3190A;Parent=gene:Rv3190A;biotype=protein_coding;transcript_id=Rv3190A Chromosome ena exon 3556855 3557064 . + . Parent=transcript:Rv3190A;Name=Rv3190A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3190A-1;rank=1 Chromosome ena CDS 3556855 3557064 . + 0 ID=CDS:Rv3190A;Parent=transcript:Rv3190A;protein_id=Rv3190A ### -Chromosome ena gene 3557311 3558345 . - . ID=gene:Rv3191c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3191c;logic_name=ena +Chromosome ena gene 3557311 3558345 . - . ID=gene:Rv3191c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3191c;logic_name=ena Chromosome ena mRNA 3557311 3558345 . - . ID=transcript:Rv3191c;Parent=gene:Rv3191c;biotype=protein_coding;transcript_id=Rv3191c Chromosome ena exon 3557311 3558345 . - . Parent=transcript:Rv3191c;Name=Rv3191c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3191c-1;rank=1 Chromosome ena CDS 3557311 3558345 . - 0 ID=CDS:Rv3191c;Parent=transcript:Rv3191c;protein_id=Rv3191c ### -Chromosome ena_mobile_element biological_region 3557314 3558345 . - . external_name=Rv3191c%3B IS1603%2C len: 1032 nt. Insertion sequence IS1603. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element +Chromosome ena_mobile_element biological_region 3557314 3558345 . - . external_name=Rv3191c%3B IS1603%2C len: 1032 nt. Insertion sequence IS1603. This region is a possible MT-complex-specific genomic island (See Becq et al.%2C 2007).;logic_name=ena_mobile_element Chromosome ena tRNA_gene 3559370 3559443 . - . ID=gene:EBG00000313350;Name=metU;biotype=tRNA;gene_id=EBG00000313350;logic_name=ena_rna Chromosome ena transcript 3559370 3559443 . - . ID=transcript:EBG00000313350;Parent=gene:EBG00000313350;Name=metU;biotype=tRNA;transcript_id=EBG00000313350 Chromosome ena exon 3559370 3559443 . - . Parent=transcript:EBG00000313350;Name=EBG00000313350;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313350;rank=1 ### Chromosome ena_gene biological_region 3559370 3559443 . - . external_name=AL123456.3:gene:complement(3559370..3559443);logic_name=ena_gene -Chromosome ena gene 3559563 3560024 . + . ID=gene:Rv3192;biotype=protein_coding;description=Conserved hypothetical alanine and proline-rich protein;gene_id=Rv3192;logic_name=ena +Chromosome ena gene 3559563 3560024 . + . ID=gene:Rv3192;biotype=protein_coding;description=Conserved hypothetical alanine and proline-rich protein;gene_id=Rv3192;logic_name=ena Chromosome ena mRNA 3559563 3560024 . + . ID=transcript:Rv3192;Parent=gene:Rv3192;biotype=protein_coding;transcript_id=Rv3192 Chromosome ena exon 3559563 3560024 . + . Parent=transcript:Rv3192;Name=Rv3192-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3192-1;rank=1 Chromosome ena CDS 3559563 3560024 . + 0 ID=CDS:Rv3192;Parent=transcript:Rv3192;protein_id=Rv3192 ### -Chromosome ena gene 3560194 3563172 . - . ID=gene:Rv3193c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3193c;logic_name=ena +Chromosome ena gene 3560194 3563172 . - . ID=gene:Rv3193c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3193c;logic_name=ena Chromosome ena mRNA 3560194 3563172 . - . ID=transcript:Rv3193c;Parent=gene:Rv3193c;biotype=protein_coding;transcript_id=Rv3193c Chromosome ena exon 3560194 3563172 . - . Parent=transcript:Rv3193c;Name=Rv3193c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3193c-1;rank=1 Chromosome ena CDS 3560194 3563172 . - 0 ID=CDS:Rv3193c;Parent=transcript:Rv3193c;protein_id=Rv3193c ### -Chromosome ena gene 3563264 3564286 . - . ID=gene:Rv3194c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv3194c;logic_name=ena +Chromosome ena gene 3563264 3564286 . - . ID=gene:Rv3194c;biotype=protein_coding;description=Possible conserved secreted protein;gene_id=Rv3194c;logic_name=ena Chromosome ena mRNA 3563264 3564286 . - . ID=transcript:Rv3194c;Parent=gene:Rv3194c;biotype=protein_coding;transcript_id=Rv3194c Chromosome ena exon 3563264 3564286 . - . Parent=transcript:Rv3194c;Name=Rv3194c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3194c-1;rank=1 Chromosome ena CDS 3563264 3564286 . - 0 ID=CDS:Rv3194c;Parent=transcript:Rv3194c;protein_id=Rv3194c ### -Chromosome ena gene 3564364 3565782 . + . ID=gene:Rv3195;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3195;logic_name=ena +Chromosome ena gene 3564364 3565782 . + . ID=gene:Rv3195;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3195;logic_name=ena Chromosome ena mRNA 3564364 3565782 . + . ID=transcript:Rv3195;Parent=gene:Rv3195;biotype=protein_coding;transcript_id=Rv3195 Chromosome ena exon 3564364 3565782 . + . Parent=transcript:Rv3195;Name=Rv3195-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3195-1;rank=1 Chromosome ena CDS 3564364 3565782 . + 0 ID=CDS:Rv3195;Parent=transcript:Rv3195;protein_id=Rv3195 ### -Chromosome ena gene 3565788 3566687 . + . ID=gene:Rv3196;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3196;logic_name=ena +Chromosome ena gene 3565788 3566687 . + . ID=gene:Rv3196;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3196;logic_name=ena Chromosome ena mRNA 3565788 3566687 . + . ID=transcript:Rv3196;Parent=gene:Rv3196;biotype=protein_coding;transcript_id=Rv3196 Chromosome ena exon 3565788 3566687 . + . Parent=transcript:Rv3196;Name=Rv3196-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3196-1;rank=1 Chromosome ena CDS 3565788 3566687 . + 0 ID=CDS:Rv3196;Parent=transcript:Rv3196;protein_id=Rv3196 ### -Chromosome ena gene 3566696 3566896 . - . ID=gene:Rv3196A;biotype=protein_coding;description=Unknown protein;gene_id=Rv3196A;logic_name=ena +Chromosome ena gene 3566696 3566896 . - . ID=gene:Rv3196A;biotype=protein_coding;description=Unknown protein;gene_id=Rv3196A;logic_name=ena Chromosome ena mRNA 3566696 3566896 . - . ID=transcript:Rv3196A;Parent=gene:Rv3196A;biotype=protein_coding;transcript_id=Rv3196A Chromosome ena exon 3566696 3566896 . - . Parent=transcript:Rv3196A;Name=Rv3196A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3196A-1;rank=1 Chromosome ena CDS 3566696 3566896 . - 0 ID=CDS:Rv3196A;Parent=transcript:Rv3196A;protein_id=Rv3196A ### -Chromosome ena gene 3567024 3568367 . + . ID=gene:Rv3197;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv3197;logic_name=ena +Chromosome ena gene 3567024 3568367 . + . ID=gene:Rv3197;biotype=protein_coding;description=Probable conserved ATP-binding protein ABC transporter;gene_id=Rv3197;logic_name=ena Chromosome ena mRNA 3567024 3568367 . + . ID=transcript:Rv3197;Parent=gene:Rv3197;biotype=protein_coding;transcript_id=Rv3197 Chromosome ena exon 3567024 3568367 . + . Parent=transcript:Rv3197;Name=Rv3197-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3197-1;rank=1 Chromosome ena CDS 3567024 3568367 . + 0 ID=CDS:Rv3197;Parent=transcript:Rv3197;protein_id=Rv3197 ### -Chromosome ena gene 3568401 3568679 . - . ID=gene:Rv3197A;Name=whiB7;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB7;gene_id=Rv3197A;logic_name=ena +Chromosome ena gene 3568401 3568679 . - . ID=gene:Rv3197A;Name=whiB7;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB7;gene_id=Rv3197A;logic_name=ena Chromosome ena mRNA 3568401 3568679 . - . ID=transcript:Rv3197A;Parent=gene:Rv3197A;Name=whiB7-1;biotype=protein_coding;transcript_id=Rv3197A Chromosome ena exon 3568401 3568679 . - . Parent=transcript:Rv3197A;Name=Rv3197A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3197A-1;rank=1 Chromosome ena CDS 3568401 3568679 . - 0 ID=CDS:Rv3197A;Parent=transcript:Rv3197A;protein_id=Rv3197A ### -Chromosome ena gene 3569109 3571211 . - . ID=gene:Rv3198c;Name=uvrD2;biotype=protein_coding;description=Probable ATP-dependent DNA helicase II UvrD2;gene_id=Rv3198c;logic_name=ena +Chromosome ena gene 3569109 3571211 . - . ID=gene:Rv3198c;Name=uvrD2;biotype=protein_coding;description=Probable ATP-dependent DNA helicase II UvrD2;gene_id=Rv3198c;logic_name=ena Chromosome ena mRNA 3569109 3571211 . - . ID=transcript:Rv3198c;Parent=gene:Rv3198c;Name=uvrD2-1;biotype=protein_coding;transcript_id=Rv3198c Chromosome ena exon 3569109 3571211 . - . Parent=transcript:Rv3198c;Name=Rv3198c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3198c-1;rank=1 Chromosome ena CDS 3569109 3571211 . - 0 ID=CDS:Rv3198c;Parent=transcript:Rv3198c;protein_id=Rv3198c ### -Chromosome ena gene 3571335 3571589 . + . ID=gene:Rv3198A;biotype=protein_coding;description=Possible glutaredoxin protein;gene_id=Rv3198A;logic_name=ena +Chromosome ena gene 3571335 3571589 . + . ID=gene:Rv3198A;biotype=protein_coding;description=Possible glutaredoxin protein;gene_id=Rv3198A;logic_name=ena Chromosome ena mRNA 3571335 3571589 . + . ID=transcript:Rv3198A;Parent=gene:Rv3198A;biotype=protein_coding;transcript_id=Rv3198A Chromosome ena exon 3571335 3571589 . + . Parent=transcript:Rv3198A;Name=Rv3198A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3198A-1;rank=1 Chromosome ena CDS 3571335 3571589 . + 0 ID=CDS:Rv3198A;Parent=transcript:Rv3198A;protein_id=Rv3198A ### -Chromosome ena gene 3571602 3572543 . - . ID=gene:Rv3199c;Name=nudC;biotype=protein_coding;description=Probable NADH pyrophosphatase NudC (NAD+ diphosphatase) (NAD+ pyrophosphatase) (NADP pyrophosphatase);gene_id=Rv3199c;logic_name=ena +Chromosome ena gene 3571602 3572543 . - . ID=gene:Rv3199c;Name=nudC;biotype=protein_coding;description=Probable NADH pyrophosphatase NudC (NAD+ diphosphatase) (NAD+ pyrophosphatase) (NADP pyrophosphatase);gene_id=Rv3199c;logic_name=ena Chromosome ena mRNA 3571602 3572543 . - . ID=transcript:Rv3199c;Parent=gene:Rv3199c;Name=nudC-1;biotype=protein_coding;transcript_id=Rv3199c Chromosome ena exon 3571602 3572543 . - . Parent=transcript:Rv3199c;Name=Rv3199c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3199c-1;rank=1 Chromosome ena CDS 3571602 3572543 . - 0 ID=CDS:Rv3199c;Parent=transcript:Rv3199c;protein_id=Rv3199c ### -Chromosome ena gene 3572602 3573669 . - . ID=gene:Rv3200c;biotype=protein_coding;description=Possible transmembrane cation transporter;gene_id=Rv3200c;logic_name=ena +Chromosome ena gene 3572602 3573669 . - . ID=gene:Rv3200c;biotype=protein_coding;description=Possible transmembrane cation transporter;gene_id=Rv3200c;logic_name=ena Chromosome ena mRNA 3572602 3573669 . - . ID=transcript:Rv3200c;Parent=gene:Rv3200c;biotype=protein_coding;transcript_id=Rv3200c Chromosome ena exon 3572602 3573669 . - . Parent=transcript:Rv3200c;Name=Rv3200c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3200c-1;rank=1 Chromosome ena CDS 3572602 3573669 . - 0 ID=CDS:Rv3200c;Parent=transcript:Rv3200c;protein_id=Rv3200c ### -Chromosome ena gene 3573731 3577036 . - . ID=gene:Rv3201c;biotype=protein_coding;description=Probable ATP-dependent DNA helicase;gene_id=Rv3201c;logic_name=ena +Chromosome ena gene 3573731 3577036 . - . ID=gene:Rv3201c;biotype=protein_coding;description=Probable ATP-dependent DNA helicase;gene_id=Rv3201c;logic_name=ena Chromosome ena mRNA 3573731 3577036 . - . ID=transcript:Rv3201c;Parent=gene:Rv3201c;biotype=protein_coding;transcript_id=Rv3201c Chromosome ena exon 3573731 3577036 . - . Parent=transcript:Rv3201c;Name=Rv3201c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3201c-1;rank=1 Chromosome ena CDS 3573731 3577036 . - 0 ID=CDS:Rv3201c;Parent=transcript:Rv3201c;protein_id=Rv3201c ### -Chromosome ena gene 3577033 3580200 . - . ID=gene:Rv3202c;biotype=protein_coding;description=Possible ATP-dependent DNA helicase;gene_id=Rv3202c;logic_name=ena +Chromosome ena gene 3577033 3580200 . - . ID=gene:Rv3202c;biotype=protein_coding;description=Possible ATP-dependent DNA helicase;gene_id=Rv3202c;logic_name=ena Chromosome ena mRNA 3577033 3580200 . - . ID=transcript:Rv3202c;Parent=gene:Rv3202c;biotype=protein_coding;transcript_id=Rv3202c Chromosome ena exon 3577033 3580200 . - . Parent=transcript:Rv3202c;Name=Rv3202c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3202c-1;rank=1 Chromosome ena CDS 3577033 3580200 . - 0 ID=CDS:Rv3202c;Parent=transcript:Rv3202c;protein_id=Rv3202c ### -Chromosome ena gene 3580638 3581312 . + . ID=gene:Rv3203;Name=lipV;biotype=protein_coding;description=Possible lipase LipV;gene_id=Rv3203;logic_name=ena +Chromosome ena gene 3580638 3581312 . + . ID=gene:Rv3203;Name=lipV;biotype=protein_coding;description=Possible lipase LipV;gene_id=Rv3203;logic_name=ena Chromosome ena mRNA 3580638 3581312 . + . ID=transcript:Rv3203;Parent=gene:Rv3203;Name=lipV-1;biotype=protein_coding;transcript_id=Rv3203 Chromosome ena exon 3580638 3581312 . + . Parent=transcript:Rv3203;Name=Rv3203-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3203-1;rank=1 Chromosome ena CDS 3580638 3581312 . + 0 ID=CDS:Rv3203;Parent=transcript:Rv3203;protein_id=Rv3203 ### -Chromosome ena gene 3581315 3581620 . + . ID=gene:Rv3204;biotype=protein_coding;description=Possible DNA-methyltransferase (modification methylase);gene_id=Rv3204;logic_name=ena +Chromosome ena gene 3581315 3581620 . + . ID=gene:Rv3204;biotype=protein_coding;description=Possible DNA-methyltransferase (modification methylase);gene_id=Rv3204;logic_name=ena Chromosome ena mRNA 3581315 3581620 . + . ID=transcript:Rv3204;Parent=gene:Rv3204;biotype=protein_coding;transcript_id=Rv3204 Chromosome ena exon 3581315 3581620 . + . Parent=transcript:Rv3204;Name=Rv3204-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3204-1;rank=1 Chromosome ena CDS 3581315 3581620 . + 0 ID=CDS:Rv3204;Parent=transcript:Rv3204;protein_id=Rv3204 ### -Chromosome ena gene 3581627 3582505 . - . ID=gene:Rv3205c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3205c;logic_name=ena +Chromosome ena gene 3581627 3582505 . - . ID=gene:Rv3205c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3205c;logic_name=ena Chromosome ena mRNA 3581627 3582505 . - . ID=transcript:Rv3205c;Parent=gene:Rv3205c;biotype=protein_coding;transcript_id=Rv3205c Chromosome ena exon 3581627 3582505 . - . Parent=transcript:Rv3205c;Name=Rv3205c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3205c-1;rank=1 Chromosome ena CDS 3581627 3582505 . - 0 ID=CDS:Rv3205c;Parent=transcript:Rv3205c;protein_id=Rv3205c ### -Chromosome ena gene 3582532 3583710 . - . ID=gene:Rv3206c;Name=moeB1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein MoeB1 (MPT-synthase sulfurylase) (molybdopterin synthase sulphurylase);gene_id=Rv3206c;logic_name=ena +Chromosome ena gene 3582532 3583710 . - . ID=gene:Rv3206c;Name=moeB1;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein MoeB1 (MPT-synthase sulfurylase) (molybdopterin synthase sulphurylase);gene_id=Rv3206c;logic_name=ena Chromosome ena mRNA 3582532 3583710 . - . ID=transcript:Rv3206c;Parent=gene:Rv3206c;Name=moeB1-1;biotype=protein_coding;transcript_id=Rv3206c Chromosome ena exon 3582532 3583710 . - . Parent=transcript:Rv3206c;Name=Rv3206c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3206c-1;rank=1 Chromosome ena CDS 3582532 3583710 . - 0 ID=CDS:Rv3206c;Parent=transcript:Rv3206c;protein_id=Rv3206c ### -Chromosome ena gene 3583801 3584658 . - . ID=gene:Rv3207c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3207c;logic_name=ena +Chromosome ena gene 3583801 3584658 . - . ID=gene:Rv3207c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3207c;logic_name=ena Chromosome ena mRNA 3583801 3584658 . - . ID=transcript:Rv3207c;Parent=gene:Rv3207c;biotype=protein_coding;transcript_id=Rv3207c Chromosome ena exon 3583801 3584658 . - . Parent=transcript:Rv3207c;Name=Rv3207c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3207c-1;rank=1 Chromosome ena CDS 3583801 3584658 . - 0 ID=CDS:Rv3207c;Parent=transcript:Rv3207c;protein_id=Rv3207c ### -Chromosome ena gene 3585004 3585690 . + . ID=gene:Rv3208;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3208;logic_name=ena +Chromosome ena gene 3585004 3585690 . + . ID=gene:Rv3208;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3208;logic_name=ena Chromosome ena mRNA 3585004 3585690 . + . ID=transcript:Rv3208;Parent=gene:Rv3208;biotype=protein_coding;transcript_id=Rv3208 Chromosome ena exon 3585004 3585690 . + . Parent=transcript:Rv3208;Name=Rv3208-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3208-1;rank=1 Chromosome ena CDS 3585004 3585690 . + 0 ID=CDS:Rv3208;Parent=transcript:Rv3208;protein_id=Rv3208 ### -Chromosome ena gene 3585677 3585949 . - . ID=gene:Rv3208A;Name=TB9.4;biotype=protein_coding;description=Conserved protein TB9.4;gene_id=Rv3208A;logic_name=ena +Chromosome ena gene 3585677 3585949 . - . ID=gene:Rv3208A;Name=TB9.4;biotype=protein_coding;description=Conserved protein TB9.4;gene_id=Rv3208A;logic_name=ena Chromosome ena mRNA 3585677 3585949 . - . ID=transcript:Rv3208A;Parent=gene:Rv3208A;Name=TB9.4-1;biotype=protein_coding;transcript_id=Rv3208A Chromosome ena exon 3585677 3585949 . - . Parent=transcript:Rv3208A;Name=Rv3208A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3208A-1;rank=1 Chromosome ena CDS 3585677 3585949 . - 0 ID=CDS:Rv3208A;Parent=transcript:Rv3208A;protein_id=Rv3208A ### -Chromosome ena gene 3586274 3586834 . + . ID=gene:Rv3209;biotype=protein_coding;description=Conserved hypothetical threonine and proline rich protein;gene_id=Rv3209;logic_name=ena +Chromosome ena gene 3586274 3586834 . + . ID=gene:Rv3209;biotype=protein_coding;description=Conserved hypothetical threonine and proline rich protein;gene_id=Rv3209;logic_name=ena Chromosome ena mRNA 3586274 3586834 . + . ID=transcript:Rv3209;Parent=gene:Rv3209;biotype=protein_coding;transcript_id=Rv3209 Chromosome ena exon 3586274 3586834 . + . Parent=transcript:Rv3209;Name=Rv3209-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3209-1;rank=1 Chromosome ena CDS 3586274 3586834 . + 0 ID=CDS:Rv3209;Parent=transcript:Rv3209;protein_id=Rv3209 ### -Chromosome ena gene 3586844 3587539 . - . ID=gene:Rv3210c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3210c;logic_name=ena +Chromosome ena gene 3586844 3587539 . - . ID=gene:Rv3210c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3210c;logic_name=ena Chromosome ena mRNA 3586844 3587539 . - . ID=transcript:Rv3210c;Parent=gene:Rv3210c;biotype=protein_coding;transcript_id=Rv3210c Chromosome ena exon 3586844 3587539 . - . Parent=transcript:Rv3210c;Name=Rv3210c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3210c-1;rank=1 Chromosome ena CDS 3586844 3587539 . - 0 ID=CDS:Rv3210c;Parent=transcript:Rv3210c;protein_id=Rv3210c ### -Chromosome ena gene 3587798 3589381 . + . ID=gene:Rv3211;Name=rhlE;biotype=protein_coding;description=Probable ATP-dependent RNA helicase RhlE;gene_id=Rv3211;logic_name=ena +Chromosome ena gene 3587798 3589381 . + . ID=gene:Rv3211;Name=rhlE;biotype=protein_coding;description=Probable ATP-dependent RNA helicase RhlE;gene_id=Rv3211;logic_name=ena Chromosome ena mRNA 3587798 3589381 . + . ID=transcript:Rv3211;Parent=gene:Rv3211;Name=rhlE-1;biotype=protein_coding;transcript_id=Rv3211 Chromosome ena exon 3587798 3589381 . + . Parent=transcript:Rv3211;Name=Rv3211-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3211-1;rank=1 Chromosome ena CDS 3587798 3589381 . + 0 ID=CDS:Rv3211;Parent=transcript:Rv3211;protein_id=Rv3211 ### -Chromosome ena gene 3589394 3590617 . + . ID=gene:Rv3212;biotype=protein_coding;description=Conserved alanine valine rich protein;gene_id=Rv3212;logic_name=ena +Chromosome ena gene 3589394 3590617 . + . ID=gene:Rv3212;biotype=protein_coding;description=Conserved alanine valine rich protein;gene_id=Rv3212;logic_name=ena Chromosome ena mRNA 3589394 3590617 . + . ID=transcript:Rv3212;Parent=gene:Rv3212;biotype=protein_coding;transcript_id=Rv3212 Chromosome ena exon 3589394 3590617 . + . Parent=transcript:Rv3212;Name=Rv3212-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3212-1;rank=1 Chromosome ena CDS 3589394 3590617 . + 0 ID=CDS:Rv3212;Parent=transcript:Rv3212;protein_id=Rv3212 ### -Chromosome ena gene 3590692 3591492 . - . ID=gene:Rv3213c;biotype=protein_coding;description=Possible SOJ/para-related protein;gene_id=Rv3213c;logic_name=ena +Chromosome ena gene 3590692 3591492 . - . ID=gene:Rv3213c;biotype=protein_coding;description=Possible SOJ/para-related protein;gene_id=Rv3213c;logic_name=ena Chromosome ena mRNA 3590692 3591492 . - . ID=transcript:Rv3213c;Parent=gene:Rv3213c;biotype=protein_coding;transcript_id=Rv3213c Chromosome ena exon 3590692 3591492 . - . Parent=transcript:Rv3213c;Name=Rv3213c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3213c-1;rank=1 Chromosome ena CDS 3590692 3591492 . - 0 ID=CDS:Rv3213c;Parent=transcript:Rv3213c;protein_id=Rv3213c ### -Chromosome ena gene 3591646 3592257 . + . ID=gene:Rv3214;Name=gpm2;biotype=protein_coding;description=Possible phosphoglycerate mutase Gpm2 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM);gene_id=Rv3214;logic_name=ena +Chromosome ena gene 3591646 3592257 . + . ID=gene:Rv3214;Name=gpm2;biotype=protein_coding;description=Possible phosphoglycerate mutase Gpm2 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM);gene_id=Rv3214;logic_name=ena Chromosome ena mRNA 3591646 3592257 . + . ID=transcript:Rv3214;Parent=gene:Rv3214;Name=gpm2-1;biotype=protein_coding;transcript_id=Rv3214 Chromosome ena exon 3591646 3592257 . + . Parent=transcript:Rv3214;Name=Rv3214-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3214-1;rank=1 Chromosome ena CDS 3591646 3592257 . + 0 ID=CDS:Rv3214;Parent=transcript:Rv3214;protein_id=Rv3214 ### -Chromosome ena gene 3592254 3593372 . + . ID=gene:Rv3215;Name=entC;biotype=protein_coding;description=Probable isochorismate synthase EntC (isochorismate hydroxymutase) (enterochelin biosynthesis);gene_id=Rv3215;logic_name=ena +Chromosome ena gene 3592254 3593372 . + . ID=gene:Rv3215;Name=entC;biotype=protein_coding;description=Probable isochorismate synthase EntC (isochorismate hydroxymutase) (enterochelin biosynthesis);gene_id=Rv3215;logic_name=ena Chromosome ena mRNA 3592254 3593372 . + . ID=transcript:Rv3215;Parent=gene:Rv3215;Name=entC-1;biotype=protein_coding;transcript_id=Rv3215 Chromosome ena exon 3592254 3593372 . + . Parent=transcript:Rv3215;Name=Rv3215-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3215-1;rank=1 Chromosome ena CDS 3592254 3593372 . + 0 ID=CDS:Rv3215;Parent=transcript:Rv3215;protein_id=Rv3215 ### -Chromosome ena pseudogene 3593369 3593852 . + . ID=gene:Rv3216;biotype=pseudogene;description=GCN5-related N-acetyltransferase%2C pseudogene;gene_id=Rv3216;logic_name=ena +Chromosome ena pseudogene 3593369 3593852 . + . ID=gene:Rv3216;biotype=pseudogene;description=GCN5-related N-acetyltransferase%2C pseudogene;gene_id=Rv3216;logic_name=ena Chromosome ena pseudogene 3593369 3593852 . + . ID=transcript:Rv3216;Parent=gene:Rv3216;biotype=pseudogene;transcript_id=Rv3216 Chromosome ena exon 3593369 3593437 . + . Parent=transcript:Rv3216;Name=Rv3216-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3216-1;rank=1 Chromosome ena exon 3593439 3593852 . + . Parent=transcript:Rv3216;Name=Rv3216-2;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3216-2;rank=2 ### -Chromosome ena gene 3593804 3594235 . - . ID=gene:Rv3217c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3217c;logic_name=ena +Chromosome ena gene 3593804 3594235 . - . ID=gene:Rv3217c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3217c;logic_name=ena Chromosome ena mRNA 3593804 3594235 . - . ID=transcript:Rv3217c;Parent=gene:Rv3217c;biotype=protein_coding;transcript_id=Rv3217c Chromosome ena exon 3593804 3594235 . - . Parent=transcript:Rv3217c;Name=Rv3217c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3217c-1;rank=1 Chromosome ena CDS 3593804 3594235 . - 0 ID=CDS:Rv3217c;Parent=transcript:Rv3217c;protein_id=Rv3217c ### -Chromosome ena gene 3594468 3595433 . + . ID=gene:Rv3218;biotype=protein_coding;description=Conserved protein;gene_id=Rv3218;logic_name=ena +Chromosome ena gene 3594468 3595433 . + . ID=gene:Rv3218;biotype=protein_coding;description=Conserved protein;gene_id=Rv3218;logic_name=ena Chromosome ena mRNA 3594468 3595433 . + . ID=transcript:Rv3218;Parent=gene:Rv3218;biotype=protein_coding;transcript_id=Rv3218 Chromosome ena exon 3594468 3595433 . + . Parent=transcript:Rv3218;Name=Rv3218-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3218-1;rank=1 Chromosome ena CDS 3594468 3595433 . + 0 ID=CDS:Rv3218;Parent=transcript:Rv3218;protein_id=Rv3218 ### -Chromosome ena gene 3595713 3595967 . + . ID=gene:Rv3219;Name=whiB1;biotype=protein_coding;description=Transcriptional regulatory protein WhiB-like WhiB1. Contains [4FE-4S]2+ cluster.;gene_id=Rv3219;logic_name=ena +Chromosome ena gene 3595713 3595967 . + . ID=gene:Rv3219;Name=whiB1;biotype=protein_coding;description=Transcriptional regulatory protein WhiB-like WhiB1. Contains [4FE-4S]2+ cluster.;gene_id=Rv3219;logic_name=ena Chromosome ena mRNA 3595713 3595967 . + . ID=transcript:Rv3219;Parent=gene:Rv3219;Name=whiB1-1;biotype=protein_coding;transcript_id=Rv3219 Chromosome ena exon 3595713 3595967 . + . Parent=transcript:Rv3219;Name=Rv3219-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3219-1;rank=1 Chromosome ena CDS 3595713 3595967 . + 0 ID=CDS:Rv3219;Parent=transcript:Rv3219;protein_id=Rv3219 ### -Chromosome ena gene 3596029 3597534 . - . ID=gene:Rv3220c;biotype=protein_coding;description=Probable two component sensor kinase;gene_id=Rv3220c;logic_name=ena +Chromosome ena gene 3596029 3597534 . - . ID=gene:Rv3220c;biotype=protein_coding;description=Probable two component sensor kinase;gene_id=Rv3220c;logic_name=ena Chromosome ena mRNA 3596029 3597534 . - . ID=transcript:Rv3220c;Parent=gene:Rv3220c;biotype=protein_coding;transcript_id=Rv3220c Chromosome ena exon 3596029 3597534 . - . Parent=transcript:Rv3220c;Name=Rv3220c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3220c-1;rank=1 Chromosome ena CDS 3596029 3597534 . - 0 ID=CDS:Rv3220c;Parent=transcript:Rv3220c;protein_id=Rv3220c ### -Chromosome ena gene 3597551 3597766 . - . ID=gene:Rv3221c;Name=TB7.3;biotype=protein_coding;description=Biotinylated protein TB7.3;gene_id=Rv3221c;logic_name=ena +Chromosome ena gene 3597551 3597766 . - . ID=gene:Rv3221c;Name=TB7.3;biotype=protein_coding;description=Biotinylated protein TB7.3;gene_id=Rv3221c;logic_name=ena Chromosome ena mRNA 3597551 3597766 . - . ID=transcript:Rv3221c;Parent=gene:Rv3221c;Name=TB7.3-1;biotype=protein_coding;transcript_id=Rv3221c Chromosome ena exon 3597551 3597766 . - . Parent=transcript:Rv3221c;Name=Rv3221c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3221c-1;rank=1 Chromosome ena CDS 3597551 3597766 . - 0 ID=CDS:Rv3221c;Parent=transcript:Rv3221c;protein_id=Rv3221c ### -Chromosome ena gene 3598051 3598356 . - . ID=gene:Rv3221A;Name=rshA;biotype=protein_coding;description=Anti-sigma factor RshA;gene_id=Rv3221A;logic_name=ena +Chromosome ena gene 3598051 3598356 . - . ID=gene:Rv3221A;Name=rshA;biotype=protein_coding;description=Anti-sigma factor RshA;gene_id=Rv3221A;logic_name=ena Chromosome ena mRNA 3598051 3598356 . - . ID=transcript:Rv3221A;Parent=gene:Rv3221A;Name=rshA-1;biotype=protein_coding;transcript_id=Rv3221A Chromosome ena exon 3598051 3598356 . - . Parent=transcript:Rv3221A;Name=Rv3221A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3221A-1;rank=1 Chromosome ena CDS 3598051 3598356 . - 0 ID=CDS:Rv3221A;Parent=transcript:Rv3221A;protein_id=Rv3221A ### -Chromosome ena gene 3598353 3598904 . - . ID=gene:Rv3222c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3222c;logic_name=ena +Chromosome ena gene 3598353 3598904 . - . ID=gene:Rv3222c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3222c;logic_name=ena Chromosome ena mRNA 3598353 3598904 . - . ID=transcript:Rv3222c;Parent=gene:Rv3222c;biotype=protein_coding;transcript_id=Rv3222c Chromosome ena exon 3598353 3598904 . - . Parent=transcript:Rv3222c;Name=Rv3222c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3222c-1;rank=1 Chromosome ena CDS 3598353 3598904 . - 0 ID=CDS:Rv3222c;Parent=transcript:Rv3222c;protein_id=Rv3222c ### -Chromosome ena gene 3598901 3599551 . - . ID=gene:Rv3223c;Name=sigH;biotype=protein_coding;description=Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE);gene_id=Rv3223c;logic_name=ena +Chromosome ena gene 3598901 3599551 . - . ID=gene:Rv3223c;Name=sigH;biotype=protein_coding;description=Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE);gene_id=Rv3223c;logic_name=ena Chromosome ena mRNA 3598901 3599551 . - . ID=transcript:Rv3223c;Parent=gene:Rv3223c;Name=sigH-1;biotype=protein_coding;transcript_id=Rv3223c Chromosome ena exon 3598901 3599551 . - . Parent=transcript:Rv3223c;Name=Rv3223c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3223c-1;rank=1 Chromosome ena CDS 3598901 3599551 . - 0 ID=CDS:Rv3223c;Parent=transcript:Rv3223c;protein_id=Rv3223c ### -Chromosome ena gene 3599851 3600699 . + . ID=gene:Rv3224;biotype=protein_coding;description=Possible iron-regulated short-chain dehydrogenase/reductase;gene_id=Rv3224;logic_name=ena +Chromosome ena gene 3599851 3600699 . + . ID=gene:Rv3224;biotype=protein_coding;description=Possible iron-regulated short-chain dehydrogenase/reductase;gene_id=Rv3224;logic_name=ena Chromosome ena mRNA 3599851 3600699 . + . ID=transcript:Rv3224;Parent=gene:Rv3224;biotype=protein_coding;transcript_id=Rv3224 Chromosome ena exon 3599851 3600699 . + . Parent=transcript:Rv3224;Name=Rv3224-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3224-1;rank=1 Chromosome ena CDS 3599851 3600699 . + 0 ID=CDS:Rv3224;Parent=transcript:Rv3224;protein_id=Rv3224 ### -Chromosome ena gene 3600635 3600823 . + . ID=gene:Rv3224A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3224A;logic_name=ena +Chromosome ena gene 3600635 3600823 . + . ID=gene:Rv3224A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3224A;logic_name=ena Chromosome ena mRNA 3600635 3600823 . + . ID=transcript:Rv3224A;Parent=gene:Rv3224A;biotype=protein_coding;transcript_id=Rv3224A Chromosome ena exon 3600635 3600823 . + . Parent=transcript:Rv3224A;Name=Rv3224A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3224A-1;rank=1 Chromosome ena CDS 3600635 3600823 . + 0 ID=CDS:Rv3224A;Parent=transcript:Rv3224A;protein_id=Rv3224A ### -Chromosome ena gene 3600801 3601019 . + . ID=gene:Rv3224B;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3224B;logic_name=ena +Chromosome ena gene 3600801 3601019 . + . ID=gene:Rv3224B;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3224B;logic_name=ena Chromosome ena mRNA 3600801 3601019 . + . ID=transcript:Rv3224B;Parent=gene:Rv3224B;biotype=protein_coding;transcript_id=Rv3224B Chromosome ena exon 3600801 3601019 . + . Parent=transcript:Rv3224B;Name=Rv3224B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3224B-1;rank=1 Chromosome ena CDS 3600801 3601019 . + 0 ID=CDS:Rv3224B;Parent=transcript:Rv3224B;protein_id=Rv3224B ### -Chromosome ena gene 3601016 3602440 . - . ID=gene:Rv3225c;biotype=protein_coding;description=GCN5-related N-acetyltransferase%2C phosphorylase;gene_id=Rv3225c;logic_name=ena +Chromosome ena gene 3601016 3602440 . - . ID=gene:Rv3225c;biotype=protein_coding;description=GCN5-related N-acetyltransferase%2C phosphorylase;gene_id=Rv3225c;logic_name=ena Chromosome ena mRNA 3601016 3602440 . - . ID=transcript:Rv3225c;Parent=gene:Rv3225c;biotype=protein_coding;transcript_id=Rv3225c Chromosome ena exon 3601016 3602440 . - . Parent=transcript:Rv3225c;Name=Rv3225c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3225c-1;rank=1 Chromosome ena CDS 3601016 3602440 . - 0 ID=CDS:Rv3225c;Parent=transcript:Rv3225c;protein_id=Rv3225c ### -Chromosome ena gene 3602564 3603322 . - . ID=gene:Rv3226c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3226c;logic_name=ena +Chromosome ena gene 3602564 3603322 . - . ID=gene:Rv3226c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3226c;logic_name=ena Chromosome ena mRNA 3602564 3603322 . - . ID=transcript:Rv3226c;Parent=gene:Rv3226c;biotype=protein_coding;transcript_id=Rv3226c Chromosome ena exon 3602564 3603322 . - . Parent=transcript:Rv3226c;Name=Rv3226c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3226c-1;rank=1 Chromosome ena CDS 3602564 3603322 . - 0 ID=CDS:Rv3226c;Parent=transcript:Rv3226c;protein_id=Rv3226c ### -Chromosome ena gene 3603377 3604729 . + . ID=gene:Rv3227;Name=aroA;biotype=protein_coding;description=3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS);gene_id=Rv3227;logic_name=ena +Chromosome ena gene 3603377 3604729 . + . ID=gene:Rv3227;Name=aroA;biotype=protein_coding;description=3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS);gene_id=Rv3227;logic_name=ena Chromosome ena mRNA 3603377 3604729 . + . ID=transcript:Rv3227;Parent=gene:Rv3227;Name=aroA-1;biotype=protein_coding;transcript_id=Rv3227 Chromosome ena exon 3603377 3604729 . + . Parent=transcript:Rv3227;Name=Rv3227-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3227-1;rank=1 Chromosome ena CDS 3603377 3604729 . + 0 ID=CDS:Rv3227;Parent=transcript:Rv3227;protein_id=Rv3227 ### -Chromosome ena gene 3604726 3605718 . + . ID=gene:Rv3228;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3228;logic_name=ena +Chromosome ena gene 3604726 3605718 . + . ID=gene:Rv3228;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3228;logic_name=ena Chromosome ena mRNA 3604726 3605718 . + . ID=transcript:Rv3228;Parent=gene:Rv3228;biotype=protein_coding;transcript_id=Rv3228 Chromosome ena exon 3604726 3605718 . + . Parent=transcript:Rv3228;Name=Rv3228-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3228-1;rank=1 Chromosome ena CDS 3604726 3605718 . + 0 ID=CDS:Rv3228;Parent=transcript:Rv3228;protein_id=Rv3228 ### -Chromosome ena gene 3605751 3607034 . - . ID=gene:Rv3229c;Name=desA3;biotype=protein_coding;description=Possible linoleoyl-CoA desaturase (delta(6)-desaturase);gene_id=Rv3229c;logic_name=ena +Chromosome ena gene 3605751 3607034 . - . ID=gene:Rv3229c;Name=desA3;biotype=protein_coding;description=Possible linoleoyl-CoA desaturase (delta(6)-desaturase);gene_id=Rv3229c;logic_name=ena Chromosome ena mRNA 3605751 3607034 . - . ID=transcript:Rv3229c;Parent=gene:Rv3229c;Name=desA3-1;biotype=protein_coding;transcript_id=Rv3229c Chromosome ena exon 3605751 3607034 . - . Parent=transcript:Rv3229c;Name=Rv3229c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3229c-1;rank=1 Chromosome ena CDS 3605751 3607034 . - 0 ID=CDS:Rv3229c;Parent=transcript:Rv3229c;protein_id=Rv3229c ### -Chromosome ena gene 3607112 3608254 . - . ID=gene:Rv3230c;biotype=protein_coding;description=Hypothetical oxidoreductase;gene_id=Rv3230c;logic_name=ena +Chromosome ena gene 3607112 3608254 . - . ID=gene:Rv3230c;biotype=protein_coding;description=Hypothetical oxidoreductase;gene_id=Rv3230c;logic_name=ena Chromosome ena mRNA 3607112 3608254 . - . ID=transcript:Rv3230c;Parent=gene:Rv3230c;biotype=protein_coding;transcript_id=Rv3230c Chromosome ena exon 3607112 3608254 . - . Parent=transcript:Rv3230c;Name=Rv3230c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3230c-1;rank=1 Chromosome ena CDS 3607112 3608254 . - 0 ID=CDS:Rv3230c;Parent=transcript:Rv3230c;protein_id=Rv3230c ### -Chromosome ena gene 3608364 3608873 . - . ID=gene:Rv3231c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3231c;logic_name=ena +Chromosome ena gene 3608364 3608873 . - . ID=gene:Rv3231c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3231c;logic_name=ena Chromosome ena mRNA 3608364 3608873 . - . ID=transcript:Rv3231c;Parent=gene:Rv3231c;biotype=protein_coding;transcript_id=Rv3231c Chromosome ena exon 3608364 3608873 . - . Parent=transcript:Rv3231c;Name=Rv3231c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3231c-1;rank=1 Chromosome ena CDS 3608364 3608873 . - 0 ID=CDS:Rv3231c;Parent=transcript:Rv3231c;protein_id=Rv3231c ### -Chromosome ena gene 3608870 3609757 . - . ID=gene:Rv3232c;Name=ppk2;biotype=protein_coding;description=Polyphosphate kinase Ppk2 (polyphosphoric acid kinase);gene_id=Rv3232c;logic_name=ena +Chromosome ena gene 3608870 3609757 . - . ID=gene:Rv3232c;Name=ppk2;biotype=protein_coding;description=Polyphosphate kinase Ppk2 (polyphosphoric acid kinase);gene_id=Rv3232c;logic_name=ena Chromosome ena mRNA 3608870 3609757 . - . ID=transcript:Rv3232c;Parent=gene:Rv3232c;Name=ppk2-1;biotype=protein_coding;transcript_id=Rv3232c Chromosome ena exon 3608870 3609757 . - . Parent=transcript:Rv3232c;Name=Rv3232c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3232c-1;rank=1 Chromosome ena CDS 3608870 3609757 . - 0 ID=CDS:Rv3232c;Parent=transcript:Rv3232c;protein_id=Rv3232c ### -Chromosome ena gene 3609781 3610371 . - . ID=gene:Rv3233c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3233c;logic_name=ena +Chromosome ena gene 3609781 3610371 . - . ID=gene:Rv3233c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3233c;logic_name=ena Chromosome ena mRNA 3609781 3610371 . - . ID=transcript:Rv3233c;Parent=gene:Rv3233c;biotype=protein_coding;transcript_id=Rv3233c Chromosome ena exon 3609781 3610371 . - . Parent=transcript:Rv3233c;Name=Rv3233c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3233c-1;rank=1 Chromosome ena CDS 3609781 3610371 . - 0 ID=CDS:Rv3233c;Parent=transcript:Rv3233c;protein_id=Rv3233c ### -Chromosome ena gene 3610374 3611189 . - . ID=gene:Rv3234c;Name=tgs3;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs3;gene_id=Rv3234c;logic_name=ena +Chromosome ena gene 3610374 3611189 . - . ID=gene:Rv3234c;Name=tgs3;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs3;gene_id=Rv3234c;logic_name=ena Chromosome ena mRNA 3610374 3611189 . - . ID=transcript:Rv3234c;Parent=gene:Rv3234c;Name=tgs3-1;biotype=protein_coding;transcript_id=Rv3234c Chromosome ena exon 3610374 3611189 . - . Parent=transcript:Rv3234c;Name=Rv3234c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3234c-1;rank=1 Chromosome ena CDS 3610374 3611189 . - 0 ID=CDS:Rv3234c;Parent=transcript:Rv3234c;protein_id=Rv3234c ### -Chromosome ena gene 3611300 3611941 . + . ID=gene:Rv3235;biotype=protein_coding;description=Hypothetical alanine arginine proline rich protein;gene_id=Rv3235;logic_name=ena +Chromosome ena gene 3611300 3611941 . + . ID=gene:Rv3235;biotype=protein_coding;description=Hypothetical alanine arginine proline rich protein;gene_id=Rv3235;logic_name=ena Chromosome ena mRNA 3611300 3611941 . + . ID=transcript:Rv3235;Parent=gene:Rv3235;biotype=protein_coding;transcript_id=Rv3235 Chromosome ena exon 3611300 3611941 . + . Parent=transcript:Rv3235;Name=Rv3235-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3235-1;rank=1 Chromosome ena CDS 3611300 3611941 . + 0 ID=CDS:Rv3235;Parent=transcript:Rv3235;protein_id=Rv3235 ### -Chromosome ena gene 3611959 3613116 . - . ID=gene:Rv3236c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv3236c;logic_name=ena +Chromosome ena gene 3611959 3613116 . - . ID=gene:Rv3236c;biotype=protein_coding;description=Probable conserved integral membrane transport protein;gene_id=Rv3236c;logic_name=ena Chromosome ena mRNA 3611959 3613116 . - . ID=transcript:Rv3236c;Parent=gene:Rv3236c;biotype=protein_coding;transcript_id=Rv3236c Chromosome ena exon 3611959 3613116 . - . Parent=transcript:Rv3236c;Name=Rv3236c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3236c-1;rank=1 Chromosome ena CDS 3611959 3613116 . - 0 ID=CDS:Rv3236c;Parent=transcript:Rv3236c;protein_id=Rv3236c ### -Chromosome ena gene 3613121 3613603 . - . ID=gene:Rv3237c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3237c;logic_name=ena +Chromosome ena gene 3613121 3613603 . - . ID=gene:Rv3237c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3237c;logic_name=ena Chromosome ena mRNA 3613121 3613603 . - . ID=transcript:Rv3237c;Parent=gene:Rv3237c;biotype=protein_coding;transcript_id=Rv3237c Chromosome ena exon 3613121 3613603 . - . Parent=transcript:Rv3237c;Name=Rv3237c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3237c-1;rank=1 Chromosome ena CDS 3613121 3613603 . - 0 ID=CDS:Rv3237c;Parent=transcript:Rv3237c;protein_id=Rv3237c ### -Chromosome ena gene 3613664 3614398 . - . ID=gene:Rv3238c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3238c;logic_name=ena +Chromosome ena gene 3613664 3614398 . - . ID=gene:Rv3238c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3238c;logic_name=ena Chromosome ena mRNA 3613664 3614398 . - . ID=transcript:Rv3238c;Parent=gene:Rv3238c;biotype=protein_coding;transcript_id=Rv3238c Chromosome ena exon 3613664 3614398 . - . Parent=transcript:Rv3238c;Name=Rv3238c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3238c-1;rank=1 Chromosome ena CDS 3613664 3614398 . - 0 ID=CDS:Rv3238c;Parent=transcript:Rv3238c;protein_id=Rv3238c ### -Chromosome ena gene 3614457 3617603 . - . ID=gene:Rv3239c;biotype=protein_coding;description=Probable conserved transmembrane transport protein;gene_id=Rv3239c;logic_name=ena +Chromosome ena gene 3614457 3617603 . - . ID=gene:Rv3239c;biotype=protein_coding;description=Probable conserved transmembrane transport protein;gene_id=Rv3239c;logic_name=ena Chromosome ena mRNA 3614457 3617603 . - . ID=transcript:Rv3239c;Parent=gene:Rv3239c;biotype=protein_coding;transcript_id=Rv3239c Chromosome ena exon 3614457 3617603 . - . Parent=transcript:Rv3239c;Name=Rv3239c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3239c-1;rank=1 Chromosome ena CDS 3614457 3617603 . - 0 ID=CDS:Rv3239c;Parent=transcript:Rv3239c;protein_id=Rv3239c ### -Chromosome ena gene 3617682 3620531 . - . ID=gene:Rv3240c;Name=secA1;biotype=protein_coding;description=Probable preprotein translocase SecA1 1 subunit;gene_id=Rv3240c;logic_name=ena +Chromosome ena gene 3617682 3620531 . - . ID=gene:Rv3240c;Name=secA1;biotype=protein_coding;description=Probable preprotein translocase SecA1 1 subunit;gene_id=Rv3240c;logic_name=ena Chromosome ena mRNA 3617682 3620531 . - . ID=transcript:Rv3240c;Parent=gene:Rv3240c;Name=secA1-1;biotype=protein_coding;transcript_id=Rv3240c Chromosome ena exon 3617682 3620531 . - . Parent=transcript:Rv3240c;Name=Rv3240c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3240c-1;rank=1 Chromosome ena CDS 3617682 3620531 . - 0 ID=CDS:Rv3240c;Parent=transcript:Rv3240c;protein_id=Rv3240c ### -Chromosome ena gene 3620610 3621254 . - . ID=gene:Rv3241c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3241c;logic_name=ena +Chromosome ena gene 3620610 3621254 . - . ID=gene:Rv3241c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3241c;logic_name=ena Chromosome ena mRNA 3620610 3621254 . - . ID=transcript:Rv3241c;Parent=gene:Rv3241c;biotype=protein_coding;transcript_id=Rv3241c Chromosome ena exon 3620610 3621254 . - . Parent=transcript:Rv3241c;Name=Rv3241c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3241c-1;rank=1 Chromosome ena CDS 3620610 3621254 . - 0 ID=CDS:Rv3241c;Parent=transcript:Rv3241c;protein_id=Rv3241c ### -Chromosome ena gene 3621570 3622211 . - . ID=gene:Rv3242c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3242c;logic_name=ena +Chromosome ena gene 3621570 3622211 . - . ID=gene:Rv3242c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3242c;logic_name=ena Chromosome ena mRNA 3621570 3622211 . - . ID=transcript:Rv3242c;Parent=gene:Rv3242c;biotype=protein_coding;transcript_id=Rv3242c Chromosome ena exon 3621570 3622211 . - . Parent=transcript:Rv3242c;Name=Rv3242c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3242c-1;rank=1 Chromosome ena CDS 3621570 3622211 . - 0 ID=CDS:Rv3242c;Parent=transcript:Rv3242c;protein_id=Rv3242c ### -Chromosome ena gene 3622249 3623091 . - . ID=gene:Rv3243c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3243c;logic_name=ena +Chromosome ena gene 3622249 3623091 . - . ID=gene:Rv3243c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3243c;logic_name=ena Chromosome ena mRNA 3622249 3623091 . - . ID=transcript:Rv3243c;Parent=gene:Rv3243c;biotype=protein_coding;transcript_id=Rv3243c Chromosome ena exon 3622249 3623091 . - . Parent=transcript:Rv3243c;Name=Rv3243c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3243c-1;rank=1 Chromosome ena CDS 3622249 3623091 . - 0 ID=CDS:Rv3243c;Parent=transcript:Rv3243c;protein_id=Rv3243c ### -Chromosome ena gene 3623159 3624910 . - . ID=gene:Rv3244c;Name=lpqB;biotype=protein_coding;description=Probable conserved lipoprotein LpqB;gene_id=Rv3244c;logic_name=ena +Chromosome ena gene 3623159 3624910 . - . ID=gene:Rv3244c;Name=lpqB;biotype=protein_coding;description=Probable conserved lipoprotein LpqB;gene_id=Rv3244c;logic_name=ena Chromosome ena mRNA 3623159 3624910 . - . ID=transcript:Rv3244c;Parent=gene:Rv3244c;Name=lpqB-1;biotype=protein_coding;transcript_id=Rv3244c Chromosome ena exon 3623159 3624910 . - . Parent=transcript:Rv3244c;Name=Rv3244c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3244c-1;rank=1 Chromosome ena CDS 3623159 3624910 . - 0 ID=CDS:Rv3244c;Parent=transcript:Rv3244c;protein_id=Rv3244c ### -Chromosome ena gene 3624910 3626613 . - . ID=gene:Rv3245c;Name=mtrB;biotype=protein_coding;description=Two component sensory transduction histidine kinase MtrB;gene_id=Rv3245c;logic_name=ena +Chromosome ena gene 3624910 3626613 . - . ID=gene:Rv3245c;Name=mtrB;biotype=protein_coding;description=Two component sensory transduction histidine kinase MtrB;gene_id=Rv3245c;logic_name=ena Chromosome ena mRNA 3624910 3626613 . - . ID=transcript:Rv3245c;Parent=gene:Rv3245c;Name=mtrB-1;biotype=protein_coding;transcript_id=Rv3245c Chromosome ena exon 3624910 3626613 . - . Parent=transcript:Rv3245c;Name=Rv3245c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3245c-1;rank=1 Chromosome ena CDS 3624910 3626613 . - 0 ID=CDS:Rv3245c;Parent=transcript:Rv3245c;protein_id=Rv3245c ### -Chromosome ena gene 3626663 3627349 . - . ID=gene:Rv3246c;Name=mtrA;biotype=protein_coding;description=Two component sensory transduction transcriptional regulatory protein MtrA;gene_id=Rv3246c;logic_name=ena +Chromosome ena gene 3626663 3627349 . - . ID=gene:Rv3246c;Name=mtrA;biotype=protein_coding;description=Two component sensory transduction transcriptional regulatory protein MtrA;gene_id=Rv3246c;logic_name=ena Chromosome ena mRNA 3626663 3627349 . - . ID=transcript:Rv3246c;Parent=gene:Rv3246c;Name=mtrA-1;biotype=protein_coding;transcript_id=Rv3246c Chromosome ena exon 3626663 3627349 . - . Parent=transcript:Rv3246c;Name=Rv3246c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3246c-1;rank=1 Chromosome ena CDS 3626663 3627349 . - 0 ID=CDS:Rv3246c;Parent=transcript:Rv3246c;protein_id=Rv3246c ### -Chromosome ena gene 3627419 3628063 . - . ID=gene:Rv3247c;Name=tmk;biotype=protein_coding;description=Thymidylate kinase Tmk (dTMP kinase) (thymidylic acid kinase) (TMPK);gene_id=Rv3247c;logic_name=ena +Chromosome ena gene 3627419 3628063 . - . ID=gene:Rv3247c;Name=tmk;biotype=protein_coding;description=Thymidylate kinase Tmk (dTMP kinase) (thymidylic acid kinase) (TMPK);gene_id=Rv3247c;logic_name=ena Chromosome ena mRNA 3627419 3628063 . - . ID=transcript:Rv3247c;Parent=gene:Rv3247c;Name=tmk-1;biotype=protein_coding;transcript_id=Rv3247c Chromosome ena exon 3627419 3628063 . - . Parent=transcript:Rv3247c;Name=Rv3247c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3247c-1;rank=1 Chromosome ena CDS 3627419 3628063 . - 0 ID=CDS:Rv3247c;Parent=transcript:Rv3247c;protein_id=Rv3247c ### -Chromosome ena gene 3628160 3629647 . - . ID=gene:Rv3248c;Name=sahH;biotype=protein_coding;description=Probable adenosylhomocysteinase SahH (S-adenosyl-L-homocysteine hydrolase) (adohcyase);gene_id=Rv3248c;logic_name=ena +Chromosome ena gene 3628160 3629647 . - . ID=gene:Rv3248c;Name=sahH;biotype=protein_coding;description=Probable adenosylhomocysteinase SahH (S-adenosyl-L-homocysteine hydrolase) (adohcyase);gene_id=Rv3248c;logic_name=ena Chromosome ena mRNA 3628160 3629647 . - . ID=transcript:Rv3248c;Parent=gene:Rv3248c;Name=sahH-1;biotype=protein_coding;transcript_id=Rv3248c Chromosome ena exon 3628160 3629647 . - . Parent=transcript:Rv3248c;Name=Rv3248c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3248c-1;rank=1 Chromosome ena CDS 3628160 3629647 . - 0 ID=CDS:Rv3248c;Parent=transcript:Rv3248c;protein_id=Rv3248c ### -Chromosome ena gene 3629752 3630387 . - . ID=gene:Rv3249c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3249c;logic_name=ena +Chromosome ena gene 3629752 3630387 . - . ID=gene:Rv3249c;biotype=protein_coding;description=Possible transcriptional regulatory protein (probably TetR-family);gene_id=Rv3249c;logic_name=ena Chromosome ena mRNA 3629752 3630387 . - . ID=transcript:Rv3249c;Parent=gene:Rv3249c;biotype=protein_coding;transcript_id=Rv3249c Chromosome ena exon 3629752 3630387 . - . Parent=transcript:Rv3249c;Name=Rv3249c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3249c-1;rank=1 Chromosome ena CDS 3629752 3630387 . - 0 ID=CDS:Rv3249c;Parent=transcript:Rv3249c;protein_id=Rv3249c ### -Chromosome ena gene 3630384 3630566 . - . ID=gene:Rv3250c;Name=rubB;biotype=protein_coding;description=Probable rubredoxin RubB;gene_id=Rv3250c;logic_name=ena +Chromosome ena gene 3630384 3630566 . - . ID=gene:Rv3250c;Name=rubB;biotype=protein_coding;description=Probable rubredoxin RubB;gene_id=Rv3250c;logic_name=ena Chromosome ena mRNA 3630384 3630566 . - . ID=transcript:Rv3250c;Parent=gene:Rv3250c;Name=rubB-1;biotype=protein_coding;transcript_id=Rv3250c Chromosome ena exon 3630384 3630566 . - . Parent=transcript:Rv3250c;Name=Rv3250c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3250c-1;rank=1 Chromosome ena CDS 3630384 3630566 . - 0 ID=CDS:Rv3250c;Parent=transcript:Rv3250c;protein_id=Rv3250c ### -Chromosome ena gene 3630571 3630738 . - . ID=gene:Rv3251c;Name=rubA;biotype=protein_coding;description=Probable rubredoxin RubA;gene_id=Rv3251c;logic_name=ena +Chromosome ena gene 3630571 3630738 . - . ID=gene:Rv3251c;Name=rubA;biotype=protein_coding;description=Probable rubredoxin RubA;gene_id=Rv3251c;logic_name=ena Chromosome ena mRNA 3630571 3630738 . - . ID=transcript:Rv3251c;Parent=gene:Rv3251c;Name=rubA-1;biotype=protein_coding;transcript_id=Rv3251c Chromosome ena exon 3630571 3630738 . - . Parent=transcript:Rv3251c;Name=Rv3251c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3251c-1;rank=1 Chromosome ena CDS 3630571 3630738 . - 0 ID=CDS:Rv3251c;Parent=transcript:Rv3251c;protein_id=Rv3251c ### -Chromosome ena gene 3630738 3631988 . - . ID=gene:Rv3252c;Name=alkB;biotype=protein_coding;description=Probable transmembrane alkane 1-monooxygenase AlkB (alkane 1-hydroxylase) (lauric acid omega-hydroxylase) (omega-hydroxylase) (fatty acid omega-hydroxylase) (alkane hydroxylase-rubredoxin);gene_id=Rv3252c;logic_name=ena +Chromosome ena gene 3630738 3631988 . - . ID=gene:Rv3252c;Name=alkB;biotype=protein_coding;description=Probable transmembrane alkane 1-monooxygenase AlkB (alkane 1-hydroxylase) (lauric acid omega-hydroxylase) (omega-hydroxylase) (fatty acid omega-hydroxylase) (alkane hydroxylase-rubredoxin);gene_id=Rv3252c;logic_name=ena Chromosome ena mRNA 3630738 3631988 . - . ID=transcript:Rv3252c;Parent=gene:Rv3252c;Name=alkB-1;biotype=protein_coding;transcript_id=Rv3252c Chromosome ena exon 3630738 3631988 . - . Parent=transcript:Rv3252c;Name=Rv3252c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3252c-1;rank=1 Chromosome ena CDS 3630738 3631988 . - 0 ID=CDS:Rv3252c;Parent=transcript:Rv3252c;protein_id=Rv3252c ### -Chromosome ena gene 3632097 3633584 . - . ID=gene:Rv3253c;biotype=protein_coding;description=Possible cationic amino acid transport integral membrane protein;gene_id=Rv3253c;logic_name=ena +Chromosome ena gene 3632097 3633584 . - . ID=gene:Rv3253c;biotype=protein_coding;description=Possible cationic amino acid transport integral membrane protein;gene_id=Rv3253c;logic_name=ena Chromosome ena mRNA 3632097 3633584 . - . ID=transcript:Rv3253c;Parent=gene:Rv3253c;biotype=protein_coding;transcript_id=Rv3253c Chromosome ena exon 3632097 3633584 . - . Parent=transcript:Rv3253c;Name=Rv3253c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3253c-1;rank=1 Chromosome ena CDS 3632097 3633584 . - 0 ID=CDS:Rv3253c;Parent=transcript:Rv3253c;protein_id=Rv3253c ### -Chromosome ena gene 3633675 3635063 . + . ID=gene:Rv3254;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3254;logic_name=ena +Chromosome ena gene 3633675 3635063 . + . ID=gene:Rv3254;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3254;logic_name=ena Chromosome ena mRNA 3633675 3635063 . + . ID=transcript:Rv3254;Parent=gene:Rv3254;biotype=protein_coding;transcript_id=Rv3254 Chromosome ena exon 3633675 3635063 . + . Parent=transcript:Rv3254;Name=Rv3254-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3254-1;rank=1 Chromosome ena CDS 3633675 3635063 . + 0 ID=CDS:Rv3254;Parent=transcript:Rv3254;protein_id=Rv3254 ### -Chromosome ena gene 3635041 3636267 . - . ID=gene:Rv3255c;Name=manA;biotype=protein_coding;description=Probable mannose-6-phosphate isomerase ManA (phosphomannose isomerase) (phosphomannoisomerase) (PMI) (phosphohexoisomerase) (phosphohexomutase);gene_id=Rv3255c;logic_name=ena +Chromosome ena gene 3635041 3636267 . - . ID=gene:Rv3255c;Name=manA;biotype=protein_coding;description=Probable mannose-6-phosphate isomerase ManA (phosphomannose isomerase) (phosphomannoisomerase) (PMI) (phosphohexoisomerase) (phosphohexomutase);gene_id=Rv3255c;logic_name=ena Chromosome ena mRNA 3635041 3636267 . - . ID=transcript:Rv3255c;Parent=gene:Rv3255c;Name=manA-1;biotype=protein_coding;transcript_id=Rv3255c Chromosome ena exon 3635041 3636267 . - . Parent=transcript:Rv3255c;Name=Rv3255c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3255c-1;rank=1 Chromosome ena CDS 3635041 3636267 . - 0 ID=CDS:Rv3255c;Parent=transcript:Rv3255c;protein_id=Rv3255c ### -Chromosome ena gene 3636275 3637315 . - . ID=gene:Rv3256c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3256c;logic_name=ena +Chromosome ena gene 3636275 3637315 . - . ID=gene:Rv3256c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3256c;logic_name=ena Chromosome ena mRNA 3636275 3637315 . - . ID=transcript:Rv3256c;Parent=gene:Rv3256c;biotype=protein_coding;transcript_id=Rv3256c Chromosome ena exon 3636275 3637315 . - . Parent=transcript:Rv3256c;Name=Rv3256c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3256c-1;rank=1 Chromosome ena CDS 3636275 3637315 . - 0 ID=CDS:Rv3256c;Parent=transcript:Rv3256c;protein_id=Rv3256c ### -Chromosome ena gene 3637312 3638709 . - . ID=gene:Rv3257c;Name=pmmA;biotype=protein_coding;description=Probable phosphomannomutase PmmA (PMM) (phosphomannose mutase);gene_id=Rv3257c;logic_name=ena +Chromosome ena gene 3637312 3638709 . - . ID=gene:Rv3257c;Name=pmmA;biotype=protein_coding;description=Probable phosphomannomutase PmmA (PMM) (phosphomannose mutase);gene_id=Rv3257c;logic_name=ena Chromosome ena mRNA 3637312 3638709 . - . ID=transcript:Rv3257c;Parent=gene:Rv3257c;Name=pmmA-1;biotype=protein_coding;transcript_id=Rv3257c Chromosome ena exon 3637312 3638709 . - . Parent=transcript:Rv3257c;Name=Rv3257c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3257c-1;rank=1 Chromosome ena CDS 3637312 3638709 . - 0 ID=CDS:Rv3257c;Parent=transcript:Rv3257c;protein_id=Rv3257c ### -Chromosome ena gene 3638811 3639302 . - . ID=gene:Rv3258c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3258c;logic_name=ena +Chromosome ena gene 3638811 3639302 . - . ID=gene:Rv3258c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3258c;logic_name=ena Chromosome ena mRNA 3638811 3639302 . - . ID=transcript:Rv3258c;Parent=gene:Rv3258c;biotype=protein_coding;transcript_id=Rv3258c Chromosome ena exon 3638811 3639302 . - . Parent=transcript:Rv3258c;Name=Rv3258c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3258c-1;rank=1 Chromosome ena CDS 3638811 3639302 . - 0 ID=CDS:Rv3258c;Parent=transcript:Rv3258c;protein_id=Rv3258c ### -Chromosome ena gene 3639425 3639844 . + . ID=gene:Rv3259;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3259;logic_name=ena +Chromosome ena gene 3639425 3639844 . + . ID=gene:Rv3259;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3259;logic_name=ena Chromosome ena mRNA 3639425 3639844 . + . ID=transcript:Rv3259;Parent=gene:Rv3259;biotype=protein_coding;transcript_id=Rv3259 Chromosome ena exon 3639425 3639844 . + . Parent=transcript:Rv3259;Name=Rv3259-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3259-1;rank=1 Chromosome ena CDS 3639425 3639844 . + 0 ID=CDS:Rv3259;Parent=transcript:Rv3259;protein_id=Rv3259 ### -Chromosome ena gene 3639872 3640141 . - . ID=gene:Rv3260c;Name=whiB2;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB2;gene_id=Rv3260c;logic_name=ena +Chromosome ena gene 3639872 3640141 . - . ID=gene:Rv3260c;Name=whiB2;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB2;gene_id=Rv3260c;logic_name=ena Chromosome ena mRNA 3639872 3640141 . - . ID=transcript:Rv3260c;Parent=gene:Rv3260c;Name=whiB2-1;biotype=protein_coding;transcript_id=Rv3260c Chromosome ena exon 3639872 3640141 . - . Parent=transcript:Rv3260c;Name=Rv3260c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3260c-1;rank=1 Chromosome ena CDS 3639872 3640141 . - 0 ID=CDS:Rv3260c;Parent=transcript:Rv3260c;protein_id=Rv3260c ### -Chromosome ena gene 3640543 3641538 . + . ID=gene:Rv3261;Name=fbiA;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiA;gene_id=Rv3261;logic_name=ena +Chromosome ena gene 3640543 3641538 . + . ID=gene:Rv3261;Name=fbiA;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiA;gene_id=Rv3261;logic_name=ena Chromosome ena mRNA 3640543 3641538 . + . ID=transcript:Rv3261;Parent=gene:Rv3261;Name=fbiA-1;biotype=protein_coding;transcript_id=Rv3261 Chromosome ena exon 3640543 3641538 . + . Parent=transcript:Rv3261;Name=Rv3261-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3261-1;rank=1 Chromosome ena CDS 3640543 3641538 . + 0 ID=CDS:Rv3261;Parent=transcript:Rv3261;protein_id=Rv3261 ### -Chromosome ena gene 3641535 3642881 . + . ID=gene:Rv3262;Name=fbiB;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiB;gene_id=Rv3262;logic_name=ena +Chromosome ena gene 3641535 3642881 . + . ID=gene:Rv3262;Name=fbiB;biotype=protein_coding;description=Probable F420 biosynthesis protein FbiB;gene_id=Rv3262;logic_name=ena Chromosome ena mRNA 3641535 3642881 . + . ID=transcript:Rv3262;Parent=gene:Rv3262;Name=fbiB-1;biotype=protein_coding;transcript_id=Rv3262 Chromosome ena exon 3641535 3642881 . + . Parent=transcript:Rv3262;Name=Rv3262-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3262-1;rank=1 Chromosome ena CDS 3641535 3642881 . + 0 ID=CDS:Rv3262;Parent=transcript:Rv3262;protein_id=Rv3262 ### -Chromosome ena gene 3643177 3644838 . + . ID=gene:Rv3263;biotype=protein_coding;description=Probable DNA methylase (modification methylase) (methyltransferase);gene_id=Rv3263;logic_name=ena +Chromosome ena gene 3643177 3644838 . + . ID=gene:Rv3263;biotype=protein_coding;description=Probable DNA methylase (modification methylase) (methyltransferase);gene_id=Rv3263;logic_name=ena Chromosome ena mRNA 3643177 3644838 . + . ID=transcript:Rv3263;Parent=gene:Rv3263;biotype=protein_coding;transcript_id=Rv3263 Chromosome ena exon 3643177 3644838 . + . Parent=transcript:Rv3263;Name=Rv3263-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3263-1;rank=1 Chromosome ena CDS 3643177 3644838 . + 0 ID=CDS:Rv3263;Parent=transcript:Rv3263;protein_id=Rv3263 ### -Chromosome ena gene 3644898 3645977 . - . ID=gene:Rv3264c;Name=manB;biotype=protein_coding;description=D-alpha-D-mannose-1-phosphate guanylyltransferase ManB (D-alpha-D-heptose-1-phosphate guanylyltransferase);gene_id=Rv3264c;logic_name=ena +Chromosome ena gene 3644898 3645977 . - . ID=gene:Rv3264c;Name=manB;biotype=protein_coding;description=D-alpha-D-mannose-1-phosphate guanylyltransferase ManB (D-alpha-D-heptose-1-phosphate guanylyltransferase);gene_id=Rv3264c;logic_name=ena Chromosome ena mRNA 3644898 3645977 . - . ID=transcript:Rv3264c;Parent=gene:Rv3264c;Name=manB-1;biotype=protein_coding;transcript_id=Rv3264c Chromosome ena exon 3644898 3645977 . - . Parent=transcript:Rv3264c;Name=Rv3264c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3264c-1;rank=1 Chromosome ena CDS 3644898 3645977 . - 0 ID=CDS:Rv3264c;Parent=transcript:Rv3264c;protein_id=Rv3264c ### -Chromosome ena gene 3645979 3646884 . - . ID=gene:Rv3265c;Name=wbbL1;biotype=protein_coding;description=dTDP-RHA:a-D-GlcNAc-diphosphoryl polyprenol%2Ca-3-L-rhamnosyl transferase WbbL1 (alpha-L-rhamnose-(1->3)-alpha-D-GlcNAc(1->P)-P-decaprenyl);gene_id=Rv3265c;logic_name=ena +Chromosome ena gene 3645979 3646884 . - . ID=gene:Rv3265c;Name=wbbL1;biotype=protein_coding;description=dTDP-RHA:a-D-GlcNAc-diphosphoryl polyprenol%2Ca-3-L-rhamnosyl transferase WbbL1 (alpha-L-rhamnose-(1->3)-alpha-D-GlcNAc(1->P)-P-decaprenyl);gene_id=Rv3265c;logic_name=ena Chromosome ena mRNA 3645979 3646884 . - . ID=transcript:Rv3265c;Parent=gene:Rv3265c;Name=wbbL1-1;biotype=protein_coding;transcript_id=Rv3265c Chromosome ena exon 3645979 3646884 . - . Parent=transcript:Rv3265c;Name=Rv3265c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3265c-1;rank=1 Chromosome ena CDS 3645979 3646884 . - 0 ID=CDS:Rv3265c;Parent=transcript:Rv3265c;protein_id=Rv3265c ### -Chromosome ena gene 3646895 3647809 . - . ID=gene:Rv3266c;Name=rmlD;biotype=protein_coding;description=dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD (dTDP-rhamnose modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose synthase);gene_id=Rv3266c;logic_name=ena +Chromosome ena gene 3646895 3647809 . - . ID=gene:Rv3266c;Name=rmlD;biotype=protein_coding;description=dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD (dTDP-rhamnose modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose synthase);gene_id=Rv3266c;logic_name=ena Chromosome ena mRNA 3646895 3647809 . - . ID=transcript:Rv3266c;Parent=gene:Rv3266c;Name=rmlD-1;biotype=protein_coding;transcript_id=Rv3266c Chromosome ena exon 3646895 3647809 . - . Parent=transcript:Rv3266c;Name=Rv3266c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3266c-1;rank=1 Chromosome ena CDS 3646895 3647809 . - 0 ID=CDS:Rv3266c;Parent=transcript:Rv3266c;protein_id=Rv3266c ### -Chromosome ena gene 3647885 3649381 . + . ID=gene:Rv3267;biotype=protein_coding;description=Conserved protein (CPSA-related protein);gene_id=Rv3267;logic_name=ena +Chromosome ena gene 3647885 3649381 . + . ID=gene:Rv3267;biotype=protein_coding;description=Conserved protein (CPSA-related protein);gene_id=Rv3267;logic_name=ena Chromosome ena mRNA 3647885 3649381 . + . ID=transcript:Rv3267;Parent=gene:Rv3267;biotype=protein_coding;transcript_id=Rv3267 Chromosome ena exon 3647885 3649381 . + . Parent=transcript:Rv3267;Name=Rv3267-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3267-1;rank=1 Chromosome ena CDS 3647885 3649381 . + 0 ID=CDS:Rv3267;Parent=transcript:Rv3267;protein_id=Rv3267 ### -Chromosome ena gene 3649420 3650109 . + . ID=gene:Rv3268;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3268;logic_name=ena +Chromosome ena gene 3649420 3650109 . + . ID=gene:Rv3268;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3268;logic_name=ena Chromosome ena mRNA 3649420 3650109 . + . ID=transcript:Rv3268;Parent=gene:Rv3268;biotype=protein_coding;transcript_id=Rv3268 Chromosome ena exon 3649420 3650109 . + . Parent=transcript:Rv3268;Name=Rv3268-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3268-1;rank=1 Chromosome ena CDS 3649420 3650109 . + 0 ID=CDS:Rv3268;Parent=transcript:Rv3268;protein_id=Rv3268 ### -Chromosome ena gene 3650234 3650515 . + . ID=gene:Rv3269;biotype=protein_coding;description=Conserved protein;gene_id=Rv3269;logic_name=ena +Chromosome ena gene 3650234 3650515 . + . ID=gene:Rv3269;biotype=protein_coding;description=Conserved protein;gene_id=Rv3269;logic_name=ena Chromosome ena mRNA 3650234 3650515 . + . ID=transcript:Rv3269;Parent=gene:Rv3269;biotype=protein_coding;transcript_id=Rv3269 Chromosome ena exon 3650234 3650515 . + . Parent=transcript:Rv3269;Name=Rv3269-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3269-1;rank=1 Chromosome ena CDS 3650234 3650515 . + 0 ID=CDS:Rv3269;Parent=transcript:Rv3269;protein_id=Rv3269 ### -Chromosome ena gene 3650526 3652682 . + . ID=gene:Rv3270;Name=ctpC;biotype=protein_coding;description=Probable metal cation-transporting P-type ATPase C CtpC;gene_id=Rv3270;logic_name=ena +Chromosome ena gene 3650526 3652682 . + . ID=gene:Rv3270;Name=ctpC;biotype=protein_coding;description=Probable metal cation-transporting P-type ATPase C CtpC;gene_id=Rv3270;logic_name=ena Chromosome ena mRNA 3650526 3652682 . + . ID=transcript:Rv3270;Parent=gene:Rv3270;Name=ctpC-1;biotype=protein_coding;transcript_id=Rv3270 Chromosome ena exon 3650526 3652682 . + . Parent=transcript:Rv3270;Name=Rv3270-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3270-1;rank=1 Chromosome ena CDS 3650526 3652682 . + 0 ID=CDS:Rv3270;Parent=transcript:Rv3270;protein_id=Rv3270 ### -Chromosome ena gene 3652679 3653347 . - . ID=gene:Rv3271c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3271c;logic_name=ena +Chromosome ena gene 3652679 3653347 . - . ID=gene:Rv3271c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3271c;logic_name=ena Chromosome ena mRNA 3652679 3653347 . - . ID=transcript:Rv3271c;Parent=gene:Rv3271c;biotype=protein_coding;transcript_id=Rv3271c Chromosome ena exon 3652679 3653347 . - . Parent=transcript:Rv3271c;Name=Rv3271c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3271c-1;rank=1 Chromosome ena CDS 3652679 3653347 . - 0 ID=CDS:Rv3271c;Parent=transcript:Rv3271c;protein_id=Rv3271c ### -Chromosome ena gene 3653448 3654632 . + . ID=gene:Rv3272;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3272;logic_name=ena +Chromosome ena gene 3653448 3654632 . + . ID=gene:Rv3272;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3272;logic_name=ena Chromosome ena mRNA 3653448 3654632 . + . ID=transcript:Rv3272;Parent=gene:Rv3272;biotype=protein_coding;transcript_id=Rv3272 Chromosome ena exon 3653448 3654632 . + . Parent=transcript:Rv3272;Name=Rv3272-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3272-1;rank=1 Chromosome ena CDS 3653448 3654632 . + 0 ID=CDS:Rv3272;Parent=transcript:Rv3272;protein_id=Rv3272 ### -Chromosome ena gene 3654637 3656931 . + . ID=gene:Rv3273;biotype=protein_coding;description=Probable transmembrane carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase);gene_id=Rv3273;logic_name=ena +Chromosome ena gene 3654637 3656931 . + . ID=gene:Rv3273;biotype=protein_coding;description=Probable transmembrane carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase);gene_id=Rv3273;logic_name=ena Chromosome ena mRNA 3654637 3656931 . + . ID=transcript:Rv3273;Parent=gene:Rv3273;biotype=protein_coding;transcript_id=Rv3273 Chromosome ena exon 3654637 3656931 . + . Parent=transcript:Rv3273;Name=Rv3273-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3273-1;rank=1 Chromosome ena CDS 3654637 3656931 . + 0 ID=CDS:Rv3273;Parent=transcript:Rv3273;protein_id=Rv3273 ### -Chromosome ena gene 3656920 3658089 . - . ID=gene:Rv3274c;Name=fadE25;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE25;gene_id=Rv3274c;logic_name=ena +Chromosome ena gene 3656920 3658089 . - . ID=gene:Rv3274c;Name=fadE25;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE25;gene_id=Rv3274c;logic_name=ena Chromosome ena mRNA 3656920 3658089 . - . ID=transcript:Rv3274c;Parent=gene:Rv3274c;Name=fadE25-1;biotype=protein_coding;transcript_id=Rv3274c Chromosome ena exon 3656920 3658089 . - . Parent=transcript:Rv3274c;Name=Rv3274c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3274c-1;rank=1 Chromosome ena CDS 3656920 3658089 . - 0 ID=CDS:Rv3274c;Parent=transcript:Rv3274c;protein_id=Rv3274c ### -Chromosome ena gene 3658114 3658638 . - . ID=gene:Rv3275c;Name=purE;biotype=protein_coding;description=Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC);gene_id=Rv3275c;logic_name=ena +Chromosome ena gene 3658114 3658638 . - . ID=gene:Rv3275c;Name=purE;biotype=protein_coding;description=Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC);gene_id=Rv3275c;logic_name=ena Chromosome ena mRNA 3658114 3658638 . - . ID=transcript:Rv3275c;Parent=gene:Rv3275c;Name=purE-1;biotype=protein_coding;transcript_id=Rv3275c Chromosome ena exon 3658114 3658638 . - . Parent=transcript:Rv3275c;Name=Rv3275c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3275c-1;rank=1 Chromosome ena CDS 3658114 3658638 . - 0 ID=CDS:Rv3275c;Parent=transcript:Rv3275c;protein_id=Rv3275c ### -Chromosome ena gene 3658635 3659924 . - . ID=gene:Rv3276c;Name=purK;biotype=protein_coding;description=Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC);gene_id=Rv3276c;logic_name=ena +Chromosome ena gene 3658635 3659924 . - . ID=gene:Rv3276c;Name=purK;biotype=protein_coding;description=Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC);gene_id=Rv3276c;logic_name=ena Chromosome ena mRNA 3658635 3659924 . - . ID=transcript:Rv3276c;Parent=gene:Rv3276c;Name=purK-1;biotype=protein_coding;transcript_id=Rv3276c Chromosome ena exon 3658635 3659924 . - . Parent=transcript:Rv3276c;Name=Rv3276c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3276c-1;rank=1 Chromosome ena CDS 3658635 3659924 . - 0 ID=CDS:Rv3276c;Parent=transcript:Rv3276c;protein_id=Rv3276c ### -Chromosome ena gene 3659878 3660696 . + . ID=gene:Rv3277;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3277;logic_name=ena +Chromosome ena gene 3659878 3660696 . + . ID=gene:Rv3277;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3277;logic_name=ena Chromosome ena mRNA 3659878 3660696 . + . ID=transcript:Rv3277;Parent=gene:Rv3277;biotype=protein_coding;transcript_id=Rv3277 Chromosome ena exon 3659878 3660696 . + . Parent=transcript:Rv3277;Name=Rv3277-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3277-1;rank=1 Chromosome ena CDS 3659878 3660696 . + 0 ID=CDS:Rv3277;Parent=transcript:Rv3277;protein_id=Rv3277 ### -Chromosome ena gene 3660651 3661169 . - . ID=gene:Rv3278c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3278c;logic_name=ena +Chromosome ena gene 3660651 3661169 . - . ID=gene:Rv3278c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3278c;logic_name=ena Chromosome ena mRNA 3660651 3661169 . - . ID=transcript:Rv3278c;Parent=gene:Rv3278c;biotype=protein_coding;transcript_id=Rv3278c Chromosome ena exon 3660651 3661169 . - . Parent=transcript:Rv3278c;Name=Rv3278c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3278c-1;rank=1 Chromosome ena CDS 3660651 3661169 . - 0 ID=CDS:Rv3278c;Parent=transcript:Rv3278c;protein_id=Rv3278c ### -Chromosome ena gene 3661212 3662012 . - . ID=gene:Rv3279c;Name=birA;biotype=protein_coding;description=Possible bifunctional protein BirA: biotin operon repressor + biotin--[acetyl-CoA-carboxylase] synthetase (biotin--protein ligase);gene_id=Rv3279c;logic_name=ena +Chromosome ena gene 3661212 3662012 . - . ID=gene:Rv3279c;Name=birA;biotype=protein_coding;description=Possible bifunctional protein BirA: biotin operon repressor + biotin--[acetyl-CoA-carboxylase] synthetase (biotin--protein ligase);gene_id=Rv3279c;logic_name=ena Chromosome ena mRNA 3661212 3662012 . - . ID=transcript:Rv3279c;Parent=gene:Rv3279c;Name=birA-1;biotype=protein_coding;transcript_id=Rv3279c Chromosome ena exon 3661212 3662012 . - . Parent=transcript:Rv3279c;Name=Rv3279c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3279c-1;rank=1 Chromosome ena CDS 3661212 3662012 . - 0 ID=CDS:Rv3279c;Parent=transcript:Rv3279c;protein_id=Rv3279c ### -Chromosome ena gene 3662062 3663708 . + . ID=gene:Rv3280;Name=accD5;biotype=protein_coding;description=Probable propionyl-CoA carboxylase beta chain 5 AccD5 (pccase) (propanoyl-CoA:carbon dioxide ligase);gene_id=Rv3280;logic_name=ena +Chromosome ena gene 3662062 3663708 . + . ID=gene:Rv3280;Name=accD5;biotype=protein_coding;description=Probable propionyl-CoA carboxylase beta chain 5 AccD5 (pccase) (propanoyl-CoA:carbon dioxide ligase);gene_id=Rv3280;logic_name=ena Chromosome ena mRNA 3662062 3663708 . + . ID=transcript:Rv3280;Parent=gene:Rv3280;Name=accD5-1;biotype=protein_coding;transcript_id=Rv3280 Chromosome ena exon 3662062 3663708 . + . Parent=transcript:Rv3280;Name=Rv3280-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3280-1;rank=1 Chromosome ena CDS 3662062 3663708 . + 0 ID=CDS:Rv3280;Parent=transcript:Rv3280;protein_id=Rv3280 ### -Chromosome ena gene 3663689 3664222 . + . ID=gene:Rv3281;Name=accE5;biotype=protein_coding;description=Probable bifunctional protein acetyl-/propionyl-coenzyme A carboxylase (epsilon chain) AccE5;gene_id=Rv3281;logic_name=ena +Chromosome ena gene 3663689 3664222 . + . ID=gene:Rv3281;Name=accE5;biotype=protein_coding;description=Probable bifunctional protein acetyl-/propionyl-coenzyme A carboxylase (epsilon chain) AccE5;gene_id=Rv3281;logic_name=ena Chromosome ena mRNA 3663689 3664222 . + . ID=transcript:Rv3281;Parent=gene:Rv3281;Name=accE5-1;biotype=protein_coding;transcript_id=Rv3281 Chromosome ena exon 3663689 3664222 . + . Parent=transcript:Rv3281;Name=Rv3281-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3281-1;rank=1 Chromosome ena CDS 3663689 3664222 . + 0 ID=CDS:Rv3281;Parent=transcript:Rv3281;protein_id=Rv3281 ### -Chromosome ena gene 3664219 3664887 . + . ID=gene:Rv3282;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3282;logic_name=ena +Chromosome ena gene 3664219 3664887 . + . ID=gene:Rv3282;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3282;logic_name=ena Chromosome ena mRNA 3664219 3664887 . + . ID=transcript:Rv3282;Parent=gene:Rv3282;biotype=protein_coding;transcript_id=Rv3282 Chromosome ena exon 3664219 3664887 . + . Parent=transcript:Rv3282;Name=Rv3282-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3282-1;rank=1 Chromosome ena CDS 3664219 3664887 . + 0 ID=CDS:Rv3282;Parent=transcript:Rv3282;protein_id=Rv3282 ### -Chromosome ena gene 3664928 3665821 . + . ID=gene:Rv3283;Name=sseA;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase SseA (rhodanese) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv3283;logic_name=ena +Chromosome ena gene 3664928 3665821 . + . ID=gene:Rv3283;Name=sseA;biotype=protein_coding;description=Probable thiosulfate sulfurtransferase SseA (rhodanese) (thiosulfate cyanide transsulfurase) (thiosulfate thiotransferase);gene_id=Rv3283;logic_name=ena Chromosome ena mRNA 3664928 3665821 . + . ID=transcript:Rv3283;Parent=gene:Rv3283;Name=sseA-1;biotype=protein_coding;transcript_id=Rv3283 Chromosome ena exon 3664928 3665821 . + . Parent=transcript:Rv3283;Name=Rv3283-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3283-1;rank=1 Chromosome ena CDS 3664928 3665821 . + 0 ID=CDS:Rv3283;Parent=transcript:Rv3283;protein_id=Rv3283 ### -Chromosome ena gene 3665818 3666249 . + . ID=gene:Rv3284;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3284;logic_name=ena +Chromosome ena gene 3665818 3666249 . + . ID=gene:Rv3284;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3284;logic_name=ena Chromosome ena mRNA 3665818 3666249 . + . ID=transcript:Rv3284;Parent=gene:Rv3284;biotype=protein_coding;transcript_id=Rv3284 Chromosome ena exon 3665818 3666249 . + . Parent=transcript:Rv3284;Name=Rv3284-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3284-1;rank=1 Chromosome ena CDS 3665818 3666249 . + 0 ID=CDS:Rv3284;Parent=transcript:Rv3284;protein_id=Rv3284 ### -Chromosome ena gene 3666357 3668159 . + . ID=gene:Rv3285;Name=accA3;biotype=protein_coding;description=Probable bifunctional protein acetyl-/propionyl-coenzyme A carboxylase (alpha chain) AccA3: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv3285;logic_name=ena +Chromosome ena gene 3666357 3668159 . + . ID=gene:Rv3285;Name=accA3;biotype=protein_coding;description=Probable bifunctional protein acetyl-/propionyl-coenzyme A carboxylase (alpha chain) AccA3: biotin carboxylase + biotin carboxyl carrier protein (BCCP);gene_id=Rv3285;logic_name=ena Chromosome ena mRNA 3666357 3668159 . + . ID=transcript:Rv3285;Parent=gene:Rv3285;Name=accA3-1;biotype=protein_coding;transcript_id=Rv3285 Chromosome ena exon 3666357 3668159 . + . Parent=transcript:Rv3285;Name=Rv3285-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3285-1;rank=1 Chromosome ena CDS 3666357 3668159 . + 0 ID=CDS:Rv3285;Parent=transcript:Rv3285;protein_id=Rv3285 ### -Chromosome ena gene 3668169 3668954 . - . ID=gene:Rv3286c;Name=sigF;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigF;gene_id=Rv3286c;logic_name=ena +Chromosome ena gene 3668169 3668954 . - . ID=gene:Rv3286c;Name=sigF;biotype=protein_coding;description=Alternative RNA polymerase sigma factor SigF;gene_id=Rv3286c;logic_name=ena Chromosome ena mRNA 3668169 3668954 . - . ID=transcript:Rv3286c;Parent=gene:Rv3286c;Name=sigF-1;biotype=protein_coding;transcript_id=Rv3286c Chromosome ena exon 3668169 3668954 . - . Parent=transcript:Rv3286c;Name=Rv3286c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3286c-1;rank=1 Chromosome ena CDS 3668169 3668954 . - 0 ID=CDS:Rv3286c;Parent=transcript:Rv3286c;protein_id=Rv3286c ### -Chromosome ena gene 3668951 3669388 . - . ID=gene:Rv3287c;Name=rsbW;biotype=protein_coding;description=Anti-sigma factor RsbW (sigma negative effector);gene_id=Rv3287c;logic_name=ena +Chromosome ena gene 3668951 3669388 . - . ID=gene:Rv3287c;Name=rsbW;biotype=protein_coding;description=Anti-sigma factor RsbW (sigma negative effector);gene_id=Rv3287c;logic_name=ena Chromosome ena mRNA 3668951 3669388 . - . ID=transcript:Rv3287c;Parent=gene:Rv3287c;Name=rsbW-1;biotype=protein_coding;transcript_id=Rv3287c Chromosome ena exon 3668951 3669388 . - . Parent=transcript:Rv3287c;Name=Rv3287c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3287c-1;rank=1 Chromosome ena CDS 3668951 3669388 . - 0 ID=CDS:Rv3287c;Parent=transcript:Rv3287c;protein_id=Rv3287c ### -Chromosome ena gene 3669586 3669999 . - . ID=gene:Rv3288c;Name=usfY;biotype=protein_coding;description=Putative protein UsfY;gene_id=Rv3288c;logic_name=ena +Chromosome ena gene 3669586 3669999 . - . ID=gene:Rv3288c;Name=usfY;biotype=protein_coding;description=Putative protein UsfY;gene_id=Rv3288c;logic_name=ena Chromosome ena mRNA 3669586 3669999 . - . ID=transcript:Rv3288c;Parent=gene:Rv3288c;Name=usfY-1;biotype=protein_coding;transcript_id=Rv3288c Chromosome ena exon 3669586 3669999 . - . Parent=transcript:Rv3288c;Name=Rv3288c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3288c-1;rank=1 Chromosome ena CDS 3669586 3669999 . - 0 ID=CDS:Rv3288c;Parent=transcript:Rv3288c;protein_id=Rv3288c ### -Chromosome ena gene 3670034 3670411 . - . ID=gene:Rv3289c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv3289c;logic_name=ena +Chromosome ena gene 3670034 3670411 . - . ID=gene:Rv3289c;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv3289c;logic_name=ena Chromosome ena mRNA 3670034 3670411 . - . ID=transcript:Rv3289c;Parent=gene:Rv3289c;biotype=protein_coding;transcript_id=Rv3289c Chromosome ena exon 3670034 3670411 . - . Parent=transcript:Rv3289c;Name=Rv3289c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3289c-1;rank=1 Chromosome ena CDS 3670034 3670411 . - 0 ID=CDS:Rv3289c;Parent=transcript:Rv3289c;protein_id=Rv3289c ### -Chromosome ena gene 3670445 3671794 . - . ID=gene:Rv3290c;Name=lat;biotype=protein_coding;description=Probable L-lysine-epsilon aminotransferase Lat (L-lysine aminotransferase) (lysine 6-aminotransferase);gene_id=Rv3290c;logic_name=ena +Chromosome ena gene 3670445 3671794 . - . ID=gene:Rv3290c;Name=lat;biotype=protein_coding;description=Probable L-lysine-epsilon aminotransferase Lat (L-lysine aminotransferase) (lysine 6-aminotransferase);gene_id=Rv3290c;logic_name=ena Chromosome ena mRNA 3670445 3671794 . - . ID=transcript:Rv3290c;Parent=gene:Rv3290c;Name=lat-1;biotype=protein_coding;transcript_id=Rv3290c Chromosome ena exon 3670445 3671794 . - . Parent=transcript:Rv3290c;Name=Rv3290c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3290c-1;rank=1 Chromosome ena CDS 3670445 3671794 . - 0 ID=CDS:Rv3290c;Parent=transcript:Rv3290c;protein_id=Rv3290c ### -Chromosome ena gene 3671845 3672297 . - . ID=gene:Rv3291c;Name=lrpA;biotype=protein_coding;description=Probable transcriptional regulatory protein LrpA (Lrp/AsnC-family);gene_id=Rv3291c;logic_name=ena +Chromosome ena gene 3671845 3672297 . - . ID=gene:Rv3291c;Name=lrpA;biotype=protein_coding;description=Probable transcriptional regulatory protein LrpA (Lrp/AsnC-family);gene_id=Rv3291c;logic_name=ena Chromosome ena mRNA 3671845 3672297 . - . ID=transcript:Rv3291c;Parent=gene:Rv3291c;Name=lrpA-1;biotype=protein_coding;transcript_id=Rv3291c Chromosome ena exon 3671845 3672297 . - . Parent=transcript:Rv3291c;Name=Rv3291c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3291c-1;rank=1 Chromosome ena CDS 3671845 3672297 . - 0 ID=CDS:Rv3291c;Parent=transcript:Rv3291c;protein_id=Rv3291c ### -Chromosome ena gene 3672328 3673575 . + . ID=gene:Rv3292;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3292;logic_name=ena +Chromosome ena gene 3672328 3673575 . + . ID=gene:Rv3292;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3292;logic_name=ena Chromosome ena mRNA 3672328 3673575 . + . ID=transcript:Rv3292;Parent=gene:Rv3292;biotype=protein_coding;transcript_id=Rv3292 Chromosome ena exon 3672328 3673575 . + . Parent=transcript:Rv3292;Name=Rv3292-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3292-1;rank=1 Chromosome ena CDS 3672328 3673575 . + 0 ID=CDS:Rv3292;Parent=transcript:Rv3292;protein_id=Rv3292 ### -Chromosome ena gene 3673602 3675086 . + . ID=gene:Rv3293;Name=pcd;biotype=protein_coding;description=Probable piperideine-6-carboxilic acid dehydrogenase Pcd (piperideine-6-carboxylate dehydrogenase);gene_id=Rv3293;logic_name=ena +Chromosome ena gene 3673602 3675086 . + . ID=gene:Rv3293;Name=pcd;biotype=protein_coding;description=Probable piperideine-6-carboxilic acid dehydrogenase Pcd (piperideine-6-carboxylate dehydrogenase);gene_id=Rv3293;logic_name=ena Chromosome ena mRNA 3673602 3675086 . + . ID=transcript:Rv3293;Parent=gene:Rv3293;Name=pcd-1;biotype=protein_coding;transcript_id=Rv3293 Chromosome ena exon 3673602 3675086 . + . Parent=transcript:Rv3293;Name=Rv3293-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3293-1;rank=1 Chromosome ena CDS 3673602 3675086 . + 0 ID=CDS:Rv3293;Parent=transcript:Rv3293;protein_id=Rv3293 ### -Chromosome ena gene 3675186 3675995 . - . ID=gene:Rv3294c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3294c;logic_name=ena +Chromosome ena gene 3675186 3675995 . - . ID=gene:Rv3294c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3294c;logic_name=ena Chromosome ena mRNA 3675186 3675995 . - . ID=transcript:Rv3294c;Parent=gene:Rv3294c;biotype=protein_coding;transcript_id=Rv3294c Chromosome ena exon 3675186 3675995 . - . Parent=transcript:Rv3294c;Name=Rv3294c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3294c-1;rank=1 Chromosome ena CDS 3675186 3675995 . - 0 ID=CDS:Rv3294c;Parent=transcript:Rv3294c;protein_id=Rv3294c ### -Chromosome ena gene 3676066 3676731 . + . ID=gene:Rv3295;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3295;logic_name=ena +Chromosome ena gene 3676066 3676731 . + . ID=gene:Rv3295;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably TetR-family);gene_id=Rv3295;logic_name=ena Chromosome ena mRNA 3676066 3676731 . + . ID=transcript:Rv3295;Parent=gene:Rv3295;biotype=protein_coding;transcript_id=Rv3295 Chromosome ena exon 3676066 3676731 . + . Parent=transcript:Rv3295;Name=Rv3295-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3295-1;rank=1 Chromosome ena CDS 3676066 3676731 . + 0 ID=CDS:Rv3295;Parent=transcript:Rv3295;protein_id=Rv3295 ### -Chromosome ena gene 3676775 3681316 . + . ID=gene:Rv3296;Name=lhr;biotype=protein_coding;description=Probable ATP-dependent helicase Lhr (large helicase-related protein);gene_id=Rv3296;logic_name=ena +Chromosome ena gene 3676775 3681316 . + . ID=gene:Rv3296;Name=lhr;biotype=protein_coding;description=Probable ATP-dependent helicase Lhr (large helicase-related protein);gene_id=Rv3296;logic_name=ena Chromosome ena mRNA 3676775 3681316 . + . ID=transcript:Rv3296;Parent=gene:Rv3296;Name=lhr-1;biotype=protein_coding;transcript_id=Rv3296 Chromosome ena exon 3676775 3681316 . + . Parent=transcript:Rv3296;Name=Rv3296-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3296-1;rank=1 Chromosome ena CDS 3676775 3681316 . + 0 ID=CDS:Rv3296;Parent=transcript:Rv3296;protein_id=Rv3296 ### -Chromosome ena gene 3681320 3682087 . + . ID=gene:Rv3297;Name=nei;biotype=protein_coding;description=Probable endonuclease VIII Nei;gene_id=Rv3297;logic_name=ena +Chromosome ena gene 3681320 3682087 . + . ID=gene:Rv3297;Name=nei;biotype=protein_coding;description=Probable endonuclease VIII Nei;gene_id=Rv3297;logic_name=ena Chromosome ena mRNA 3681320 3682087 . + . ID=transcript:Rv3297;Parent=gene:Rv3297;Name=nei-1;biotype=protein_coding;transcript_id=Rv3297 Chromosome ena exon 3681320 3682087 . + . Parent=transcript:Rv3297;Name=Rv3297-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3297-1;rank=1 Chromosome ena CDS 3681320 3682087 . + 0 ID=CDS:Rv3297;Parent=transcript:Rv3297;protein_id=Rv3297 ### -Chromosome ena gene 3682110 3683024 . - . ID=gene:Rv3298c;Name=lpqC;biotype=protein_coding;description=Possible esterase lipoprotein LpqC;gene_id=Rv3298c;logic_name=ena +Chromosome ena gene 3682110 3683024 . - . ID=gene:Rv3298c;Name=lpqC;biotype=protein_coding;description=Possible esterase lipoprotein LpqC;gene_id=Rv3298c;logic_name=ena Chromosome ena mRNA 3682110 3683024 . - . ID=transcript:Rv3298c;Parent=gene:Rv3298c;Name=lpqC-1;biotype=protein_coding;transcript_id=Rv3298c Chromosome ena exon 3682110 3683024 . - . Parent=transcript:Rv3298c;Name=Rv3298c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3298c-1;rank=1 Chromosome ena CDS 3682110 3683024 . - 0 ID=CDS:Rv3298c;Parent=transcript:Rv3298c;protein_id=Rv3298c ### -Chromosome ena gene 3683051 3685963 . - . ID=gene:Rv3299c;Name=atsB;biotype=protein_coding;description=Probable arylsulfatase AtsB (aryl-sulfate sulphohydrolase) (sulfatase);gene_id=Rv3299c;logic_name=ena +Chromosome ena gene 3683051 3685963 . - . ID=gene:Rv3299c;Name=atsB;biotype=protein_coding;description=Probable arylsulfatase AtsB (aryl-sulfate sulphohydrolase) (sulfatase);gene_id=Rv3299c;logic_name=ena Chromosome ena mRNA 3683051 3685963 . - . ID=transcript:Rv3299c;Parent=gene:Rv3299c;Name=atsB-1;biotype=protein_coding;transcript_id=Rv3299c Chromosome ena exon 3683051 3685963 . - . Parent=transcript:Rv3299c;Name=Rv3299c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3299c-1;rank=1 Chromosome ena CDS 3683051 3685963 . - 0 ID=CDS:Rv3299c;Parent=transcript:Rv3299c;protein_id=Rv3299c ### -Chromosome ena gene 3685983 3686900 . - . ID=gene:Rv3300c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3300c;logic_name=ena +Chromosome ena gene 3685983 3686900 . - . ID=gene:Rv3300c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3300c;logic_name=ena Chromosome ena mRNA 3685983 3686900 . - . ID=transcript:Rv3300c;Parent=gene:Rv3300c;biotype=protein_coding;transcript_id=Rv3300c Chromosome ena exon 3685983 3686900 . - . Parent=transcript:Rv3300c;Name=Rv3300c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3300c-1;rank=1 Chromosome ena CDS 3685983 3686900 . - 0 ID=CDS:Rv3300c;Parent=transcript:Rv3300c;protein_id=Rv3300c ### -Chromosome ena gene 3686912 3687577 . - . ID=gene:Rv3301c;Name=phoY1;biotype=protein_coding;description=Probable phosphate-transport system transcriptional regulatory protein PhoU homolog 1 PhoY1;gene_id=Rv3301c;logic_name=ena +Chromosome ena gene 3686912 3687577 . - . ID=gene:Rv3301c;Name=phoY1;biotype=protein_coding;description=Probable phosphate-transport system transcriptional regulatory protein PhoU homolog 1 PhoY1;gene_id=Rv3301c;logic_name=ena Chromosome ena mRNA 3686912 3687577 . - . ID=transcript:Rv3301c;Parent=gene:Rv3301c;Name=phoY1-1;biotype=protein_coding;transcript_id=Rv3301c Chromosome ena exon 3686912 3687577 . - . Parent=transcript:Rv3301c;Name=Rv3301c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3301c-1;rank=1 Chromosome ena CDS 3686912 3687577 . - 0 ID=CDS:Rv3301c;Parent=transcript:Rv3301c;protein_id=Rv3301c ### -Chromosome ena gene 3687685 3689442 . - . ID=gene:Rv3302c;Name=glpD2;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase GlpD2;gene_id=Rv3302c;logic_name=ena +Chromosome ena gene 3687685 3689442 . - . ID=gene:Rv3302c;Name=glpD2;biotype=protein_coding;description=Probable glycerol-3-phosphate dehydrogenase GlpD2;gene_id=Rv3302c;logic_name=ena Chromosome ena mRNA 3687685 3689442 . - . ID=transcript:Rv3302c;Parent=gene:Rv3302c;Name=glpD2-1;biotype=protein_coding;transcript_id=Rv3302c Chromosome ena exon 3687685 3689442 . - . Parent=transcript:Rv3302c;Name=Rv3302c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3302c-1;rank=1 Chromosome ena CDS 3687685 3689442 . - 0 ID=CDS:Rv3302c;Parent=transcript:Rv3302c;protein_id=Rv3302c ### -Chromosome ena gene 3689457 3690938 . - . ID=gene:Rv3303c;Name=lpdA;biotype=protein_coding;description=NAD(P)H quinone reductase LpdA;gene_id=Rv3303c;logic_name=ena +Chromosome ena gene 3689457 3690938 . - . ID=gene:Rv3303c;Name=lpdA;biotype=protein_coding;description=NAD(P)H quinone reductase LpdA;gene_id=Rv3303c;logic_name=ena Chromosome ena mRNA 3689457 3690938 . - . ID=transcript:Rv3303c;Parent=gene:Rv3303c;Name=lpdA-1;biotype=protein_coding;transcript_id=Rv3303c Chromosome ena exon 3689457 3690938 . - . Parent=transcript:Rv3303c;Name=Rv3303c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3303c-1;rank=1 Chromosome ena CDS 3689457 3690938 . - 0 ID=CDS:Rv3303c;Parent=transcript:Rv3303c;protein_id=Rv3303c ### -Chromosome ena gene 3691141 3691620 . + . ID=gene:Rv3304;biotype=protein_coding;description=Conserved protein;gene_id=Rv3304;logic_name=ena +Chromosome ena gene 3691141 3691620 . + . ID=gene:Rv3304;biotype=protein_coding;description=Conserved protein;gene_id=Rv3304;logic_name=ena Chromosome ena mRNA 3691141 3691620 . + . ID=transcript:Rv3304;Parent=gene:Rv3304;biotype=protein_coding;transcript_id=Rv3304 Chromosome ena exon 3691141 3691620 . + . Parent=transcript:Rv3304;Name=Rv3304-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3304-1;rank=1 Chromosome ena CDS 3691141 3691620 . + 0 ID=CDS:Rv3304;Parent=transcript:Rv3304;protein_id=Rv3304 ### -Chromosome ena gene 3691639 3692808 . - . ID=gene:Rv3305c;Name=amiA1;biotype=protein_coding;description=Possible N-acyl-L-amino acid amidohydrolase AmiA1 (N-acyl-L-amino acid aminohydrolase);gene_id=Rv3305c;logic_name=ena +Chromosome ena gene 3691639 3692808 . - . ID=gene:Rv3305c;Name=amiA1;biotype=protein_coding;description=Possible N-acyl-L-amino acid amidohydrolase AmiA1 (N-acyl-L-amino acid aminohydrolase);gene_id=Rv3305c;logic_name=ena Chromosome ena mRNA 3691639 3692808 . - . ID=transcript:Rv3305c;Parent=gene:Rv3305c;Name=amiA1-1;biotype=protein_coding;transcript_id=Rv3305c Chromosome ena exon 3691639 3692808 . - . Parent=transcript:Rv3305c;Name=Rv3305c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3305c-1;rank=1 Chromosome ena CDS 3691639 3692808 . - 0 ID=CDS:Rv3305c;Parent=transcript:Rv3305c;protein_id=Rv3305c ### -Chromosome ena gene 3692805 3693989 . - . ID=gene:Rv3306c;Name=amiB1;biotype=protein_coding;description=Probable amidohydrolase AmiB1 (aminohydrolase);gene_id=Rv3306c;logic_name=ena +Chromosome ena gene 3692805 3693989 . - . ID=gene:Rv3306c;Name=amiB1;biotype=protein_coding;description=Probable amidohydrolase AmiB1 (aminohydrolase);gene_id=Rv3306c;logic_name=ena Chromosome ena mRNA 3692805 3693989 . - . ID=transcript:Rv3306c;Parent=gene:Rv3306c;Name=amiB1-1;biotype=protein_coding;transcript_id=Rv3306c Chromosome ena exon 3692805 3693989 . - . Parent=transcript:Rv3306c;Name=Rv3306c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3306c-1;rank=1 Chromosome ena CDS 3692805 3693989 . - 0 ID=CDS:Rv3306c;Parent=transcript:Rv3306c;protein_id=Rv3306c ### -Chromosome ena gene 3694054 3694860 . + . ID=gene:Rv3307;Name=deoD;biotype=protein_coding;description=Probable purine nucleoside phosphorylase DeoD (inosine phosphorylase) (PNP);gene_id=Rv3307;logic_name=ena +Chromosome ena gene 3694054 3694860 . + . ID=gene:Rv3307;Name=deoD;biotype=protein_coding;description=Probable purine nucleoside phosphorylase DeoD (inosine phosphorylase) (PNP);gene_id=Rv3307;logic_name=ena Chromosome ena mRNA 3694054 3694860 . + . ID=transcript:Rv3307;Parent=gene:Rv3307;Name=deoD-1;biotype=protein_coding;transcript_id=Rv3307 Chromosome ena exon 3694054 3694860 . + . Parent=transcript:Rv3307;Name=Rv3307-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3307-1;rank=1 Chromosome ena CDS 3694054 3694860 . + 0 ID=CDS:Rv3307;Parent=transcript:Rv3307;protein_id=Rv3307 ### -Chromosome ena gene 3694864 3696468 . + . ID=gene:Rv3308;Name=pmmB;biotype=protein_coding;description=Probable phosphomannomutase PmmB (phosphomannose mutase);gene_id=Rv3308;logic_name=ena +Chromosome ena gene 3694864 3696468 . + . ID=gene:Rv3308;Name=pmmB;biotype=protein_coding;description=Probable phosphomannomutase PmmB (phosphomannose mutase);gene_id=Rv3308;logic_name=ena Chromosome ena mRNA 3694864 3696468 . + . ID=transcript:Rv3308;Parent=gene:Rv3308;Name=pmmB-1;biotype=protein_coding;transcript_id=Rv3308 Chromosome ena exon 3694864 3696468 . + . Parent=transcript:Rv3308;Name=Rv3308-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3308-1;rank=1 Chromosome ena CDS 3694864 3696468 . + 0 ID=CDS:Rv3308;Parent=transcript:Rv3308;protein_id=Rv3308 ### -Chromosome ena gene 3696470 3697093 . - . ID=gene:Rv3309c;Name=upp;biotype=protein_coding;description=Probable uracil phosphoribosyltransferase Upp (UMP pyrophosphorylase) (uprtase) (UMP diphosphorylase);gene_id=Rv3309c;logic_name=ena +Chromosome ena gene 3696470 3697093 . - . ID=gene:Rv3309c;Name=upp;biotype=protein_coding;description=Probable uracil phosphoribosyltransferase Upp (UMP pyrophosphorylase) (uprtase) (UMP diphosphorylase);gene_id=Rv3309c;logic_name=ena Chromosome ena mRNA 3696470 3697093 . - . ID=transcript:Rv3309c;Parent=gene:Rv3309c;Name=upp-1;biotype=protein_coding;transcript_id=Rv3309c Chromosome ena exon 3696470 3697093 . - . Parent=transcript:Rv3309c;Name=Rv3309c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3309c-1;rank=1 Chromosome ena CDS 3696470 3697093 . - 0 ID=CDS:Rv3309c;Parent=transcript:Rv3309c;protein_id=Rv3309c ### -Chromosome ena gene 3697198 3698097 . + . ID=gene:Rv3310;Name=sapM;biotype=protein_coding;description=Acid phosphatase (acid phosphomonoesterase) (phosphomonoesterase) (glycerophosphatase);gene_id=Rv3310;logic_name=ena +Chromosome ena gene 3697198 3698097 . + . ID=gene:Rv3310;Name=sapM;biotype=protein_coding;description=Acid phosphatase (acid phosphomonoesterase) (phosphomonoesterase) (glycerophosphatase);gene_id=Rv3310;logic_name=ena Chromosome ena mRNA 3697198 3698097 . + . ID=transcript:Rv3310;Parent=gene:Rv3310;Name=sapM-1;biotype=protein_coding;transcript_id=Rv3310 Chromosome ena exon 3697198 3698097 . + . Parent=transcript:Rv3310;Name=Rv3310-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3310-1;rank=1 Chromosome ena CDS 3697198 3698097 . + 0 ID=CDS:Rv3310;Parent=transcript:Rv3310;protein_id=Rv3310 ### -Chromosome ena gene 3698121 3699383 . + . ID=gene:Rv3311;biotype=protein_coding;description=Conserved protein;gene_id=Rv3311;logic_name=ena +Chromosome ena gene 3698121 3699383 . + . ID=gene:Rv3311;biotype=protein_coding;description=Conserved protein;gene_id=Rv3311;logic_name=ena Chromosome ena mRNA 3698121 3699383 . + . ID=transcript:Rv3311;Parent=gene:Rv3311;biotype=protein_coding;transcript_id=Rv3311 Chromosome ena exon 3698121 3699383 . + . Parent=transcript:Rv3311;Name=Rv3311-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3311-1;rank=1 Chromosome ena CDS 3698121 3699383 . + 0 ID=CDS:Rv3311;Parent=transcript:Rv3311;protein_id=Rv3311 ### -Chromosome ena gene 3699404 3700330 . - . ID=gene:Rv3312c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3312c;logic_name=ena +Chromosome ena gene 3699404 3700330 . - . ID=gene:Rv3312c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3312c;logic_name=ena Chromosome ena mRNA 3699404 3700330 . - . ID=transcript:Rv3312c;Parent=gene:Rv3312c;biotype=protein_coding;transcript_id=Rv3312c Chromosome ena exon 3699404 3700330 . - . Parent=transcript:Rv3312c;Name=Rv3312c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3312c-1;rank=1 Chromosome ena CDS 3699404 3700330 . - 0 ID=CDS:Rv3312c;Parent=transcript:Rv3312c;protein_id=Rv3312c ### -Chromosome ena gene 3700705 3701016 . - . ID=gene:Rv3312A;biotype=protein_coding;description=Secreted protein antigen;gene_id=Rv3312A;logic_name=ena +Chromosome ena gene 3700705 3701016 . - . ID=gene:Rv3312A;biotype=protein_coding;description=Secreted protein antigen;gene_id=Rv3312A;logic_name=ena Chromosome ena mRNA 3700705 3701016 . - . ID=transcript:Rv3312A;Parent=gene:Rv3312A;biotype=protein_coding;transcript_id=Rv3312A Chromosome ena exon 3700705 3701016 . - . Parent=transcript:Rv3312A;Name=Rv3312A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3312A-1;rank=1 Chromosome ena CDS 3700705 3701016 . - 0 ID=CDS:Rv3312A;Parent=transcript:Rv3312A;protein_id=Rv3312A ### -Chromosome ena gene 3701087 3702184 . - . ID=gene:Rv3313c;Name=add;biotype=protein_coding;description=Probable adenosine deaminase Add (adenosine aminohydrolase);gene_id=Rv3313c;logic_name=ena +Chromosome ena gene 3701087 3702184 . - . ID=gene:Rv3313c;Name=add;biotype=protein_coding;description=Probable adenosine deaminase Add (adenosine aminohydrolase);gene_id=Rv3313c;logic_name=ena Chromosome ena mRNA 3701087 3702184 . - . ID=transcript:Rv3313c;Parent=gene:Rv3313c;Name=add-1;biotype=protein_coding;transcript_id=Rv3313c Chromosome ena exon 3701087 3702184 . - . Parent=transcript:Rv3313c;Name=Rv3313c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3313c-1;rank=1 Chromosome ena CDS 3701087 3702184 . - 0 ID=CDS:Rv3313c;Parent=transcript:Rv3313c;protein_id=Rv3313c ### -Chromosome ena gene 3702184 3703467 . - . ID=gene:Rv3314c;Name=deoA;biotype=protein_coding;description=Probable thymidine phosphorylase DeoA (tdrpase) (pyrimidine phosphorylase);gene_id=Rv3314c;logic_name=ena +Chromosome ena gene 3702184 3703467 . - . ID=gene:Rv3314c;Name=deoA;biotype=protein_coding;description=Probable thymidine phosphorylase DeoA (tdrpase) (pyrimidine phosphorylase);gene_id=Rv3314c;logic_name=ena Chromosome ena mRNA 3702184 3703467 . - . ID=transcript:Rv3314c;Parent=gene:Rv3314c;Name=deoA-1;biotype=protein_coding;transcript_id=Rv3314c Chromosome ena exon 3702184 3703467 . - . Parent=transcript:Rv3314c;Name=Rv3314c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3314c-1;rank=1 Chromosome ena CDS 3702184 3703467 . - 0 ID=CDS:Rv3314c;Parent=transcript:Rv3314c;protein_id=Rv3314c ### -Chromosome ena gene 3703464 3703865 . - . ID=gene:Rv3315c;Name=cdd;biotype=protein_coding;description=Probable cytidine deaminase Cdd (cytidine aminohydrolase) (cytidine nucleoside deaminase);gene_id=Rv3315c;logic_name=ena +Chromosome ena gene 3703464 3703865 . - . ID=gene:Rv3315c;Name=cdd;biotype=protein_coding;description=Probable cytidine deaminase Cdd (cytidine aminohydrolase) (cytidine nucleoside deaminase);gene_id=Rv3315c;logic_name=ena Chromosome ena mRNA 3703464 3703865 . - . ID=transcript:Rv3315c;Parent=gene:Rv3315c;Name=cdd-1;biotype=protein_coding;transcript_id=Rv3315c Chromosome ena exon 3703464 3703865 . - . Parent=transcript:Rv3315c;Name=Rv3315c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3315c-1;rank=1 Chromosome ena CDS 3703464 3703865 . - 0 ID=CDS:Rv3315c;Parent=transcript:Rv3315c;protein_id=Rv3315c ### -Chromosome ena gene 3704102 3704440 . + . ID=gene:Rv3316;Name=sdhC;biotype=protein_coding;description=Probable succinate dehydrogenase (cytochrome B-556 subunit) SdhC (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3316;logic_name=ena +Chromosome ena gene 3704102 3704440 . + . ID=gene:Rv3316;Name=sdhC;biotype=protein_coding;description=Probable succinate dehydrogenase (cytochrome B-556 subunit) SdhC (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3316;logic_name=ena Chromosome ena mRNA 3704102 3704440 . + . ID=transcript:Rv3316;Parent=gene:Rv3316;Name=sdhC-1;biotype=protein_coding;transcript_id=Rv3316 Chromosome ena exon 3704102 3704440 . + . Parent=transcript:Rv3316;Name=Rv3316-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3316-1;rank=1 Chromosome ena CDS 3704102 3704440 . + 0 ID=CDS:Rv3316;Parent=transcript:Rv3316;protein_id=Rv3316 ### -Chromosome ena gene 3704437 3704871 . + . ID=gene:Rv3317;Name=sdhD;biotype=protein_coding;description=Probable succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3317;logic_name=ena +Chromosome ena gene 3704437 3704871 . + . ID=gene:Rv3317;Name=sdhD;biotype=protein_coding;description=Probable succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3317;logic_name=ena Chromosome ena mRNA 3704437 3704871 . + . ID=transcript:Rv3317;Parent=gene:Rv3317;Name=sdhD-1;biotype=protein_coding;transcript_id=Rv3317 Chromosome ena exon 3704437 3704871 . + . Parent=transcript:Rv3317;Name=Rv3317-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3317-1;rank=1 Chromosome ena CDS 3704437 3704871 . + 0 ID=CDS:Rv3317;Parent=transcript:Rv3317;protein_id=Rv3317 ### -Chromosome ena gene 3705000 3706772 . + . ID=gene:Rv3318;Name=sdhA;biotype=protein_coding;description=Probable succinate dehydrogenase (flavoprotein subunit) SdhA (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3318;logic_name=ena +Chromosome ena gene 3705000 3706772 . + . ID=gene:Rv3318;Name=sdhA;biotype=protein_coding;description=Probable succinate dehydrogenase (flavoprotein subunit) SdhA (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3318;logic_name=ena Chromosome ena mRNA 3705000 3706772 . + . ID=transcript:Rv3318;Parent=gene:Rv3318;Name=sdhA-1;biotype=protein_coding;transcript_id=Rv3318 Chromosome ena exon 3705000 3706772 . + . Parent=transcript:Rv3318;Name=Rv3318-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3318-1;rank=1 Chromosome ena CDS 3705000 3706772 . + 0 ID=CDS:Rv3318;Parent=transcript:Rv3318;protein_id=Rv3318 ### -Chromosome ena gene 3706772 3707563 . + . ID=gene:Rv3319;Name=sdhB;biotype=protein_coding;description=Probable succinate dehydrogenase (iron-sulphur protein subunit) SdhB (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3319;logic_name=ena +Chromosome ena gene 3706772 3707563 . + . ID=gene:Rv3319;Name=sdhB;biotype=protein_coding;description=Probable succinate dehydrogenase (iron-sulphur protein subunit) SdhB (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase);gene_id=Rv3319;logic_name=ena Chromosome ena mRNA 3706772 3707563 . + . ID=transcript:Rv3319;Parent=gene:Rv3319;Name=sdhB-1;biotype=protein_coding;transcript_id=Rv3319 Chromosome ena exon 3706772 3707563 . + . Parent=transcript:Rv3319;Name=Rv3319-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3319-1;rank=1 Chromosome ena CDS 3706772 3707563 . + 0 ID=CDS:Rv3319;Parent=transcript:Rv3319;protein_id=Rv3319 ### -Chromosome ena gene 3707642 3708070 . - . ID=gene:Rv3320c;Name=vapC44;biotype=protein_coding;description=Possible toxin VapC44. Contains PIN domain.;gene_id=Rv3320c;logic_name=ena +Chromosome ena gene 3707642 3708070 . - . ID=gene:Rv3320c;Name=vapC44;biotype=protein_coding;description=Possible toxin VapC44. Contains PIN domain.;gene_id=Rv3320c;logic_name=ena Chromosome ena mRNA 3707642 3708070 . - . ID=transcript:Rv3320c;Parent=gene:Rv3320c;Name=vapC44-1;biotype=protein_coding;transcript_id=Rv3320c Chromosome ena exon 3707642 3708070 . - . Parent=transcript:Rv3320c;Name=Rv3320c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3320c-1;rank=1 Chromosome ena CDS 3707642 3708070 . - 0 ID=CDS:Rv3320c;Parent=transcript:Rv3320c;protein_id=Rv3320c ### -Chromosome ena gene 3708074 3708316 . - . ID=gene:Rv3321c;Name=vapB44;biotype=protein_coding;description=Possible antitoxin VapB44;gene_id=Rv3321c;logic_name=ena +Chromosome ena gene 3708074 3708316 . - . ID=gene:Rv3321c;Name=vapB44;biotype=protein_coding;description=Possible antitoxin VapB44;gene_id=Rv3321c;logic_name=ena Chromosome ena mRNA 3708074 3708316 . - . ID=transcript:Rv3321c;Parent=gene:Rv3321c;Name=vapB44-1;biotype=protein_coding;transcript_id=Rv3321c Chromosome ena exon 3708074 3708316 . - . Parent=transcript:Rv3321c;Name=Rv3321c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3321c-1;rank=1 Chromosome ena CDS 3708074 3708316 . - 0 ID=CDS:Rv3321c;Parent=transcript:Rv3321c;protein_id=Rv3321c ### -Chromosome ena gene 3708438 3709052 . - . ID=gene:Rv3322c;biotype=protein_coding;description=Possible methyltransferase;gene_id=Rv3322c;logic_name=ena +Chromosome ena gene 3708438 3709052 . - . ID=gene:Rv3322c;biotype=protein_coding;description=Possible methyltransferase;gene_id=Rv3322c;logic_name=ena Chromosome ena mRNA 3708438 3709052 . - . ID=transcript:Rv3322c;Parent=gene:Rv3322c;biotype=protein_coding;transcript_id=Rv3322c Chromosome ena exon 3708438 3709052 . - . Parent=transcript:Rv3322c;Name=Rv3322c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3322c-1;rank=1 Chromosome ena CDS 3708438 3709052 . - 0 ID=CDS:Rv3322c;Parent=transcript:Rv3322c;protein_id=Rv3322c ### -Chromosome ena gene 3709049 3709714 . - . ID=gene:Rv3323c;Name=moaX;biotype=protein_coding;description=Probable MoaD-MoaE fusion protein MoaX;gene_id=Rv3323c;logic_name=ena +Chromosome ena gene 3709049 3709714 . - . ID=gene:Rv3323c;Name=moaX;biotype=protein_coding;description=Probable MoaD-MoaE fusion protein MoaX;gene_id=Rv3323c;logic_name=ena Chromosome ena mRNA 3709049 3709714 . - . ID=transcript:Rv3323c;Parent=gene:Rv3323c;Name=moaX-1;biotype=protein_coding;transcript_id=Rv3323c Chromosome ena exon 3709049 3709714 . - . Parent=transcript:Rv3323c;Name=Rv3323c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3323c-1;rank=1 Chromosome ena CDS 3709049 3709714 . - 0 ID=CDS:Rv3323c;Parent=transcript:Rv3323c;protein_id=Rv3323c ### -Chromosome ena gene 3709715 3710248 . - . ID=gene:Rv3324c;Name=moaC3;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C 3 MoaC3;gene_id=Rv3324c;logic_name=ena +Chromosome ena gene 3709715 3710248 . - . ID=gene:Rv3324c;Name=moaC3;biotype=protein_coding;description=Probable molybdenum cofactor biosynthesis protein C 3 MoaC3;gene_id=Rv3324c;logic_name=ena Chromosome ena mRNA 3709715 3710248 . - . ID=transcript:Rv3324c;Parent=gene:Rv3324c;Name=moaC3-1;biotype=protein_coding;transcript_id=Rv3324c Chromosome ena exon 3709715 3710248 . - . Parent=transcript:Rv3324c;Name=Rv3324c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3324c-1;rank=1 Chromosome ena CDS 3709715 3710248 . - 0 ID=CDS:Rv3324c;Parent=transcript:Rv3324c;protein_id=Rv3324c ### -Chromosome ena pseudogene 3710245 3710379 . - . ID=gene:Rv3324A;biotype=pseudogene;description=Probable fragment of pterin-4-alpha-carbinolamine dehydratase MOAB3 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv3324A;logic_name=ena +Chromosome ena pseudogene 3710245 3710379 . - . ID=gene:Rv3324A;biotype=pseudogene;description=Probable fragment of pterin-4-alpha-carbinolamine dehydratase MOAB3 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-a-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD);gene_id=Rv3324A;logic_name=ena Chromosome ena pseudogene 3710245 3710379 . - . ID=transcript:Rv3324A;Parent=gene:Rv3324A;biotype=pseudogene;transcript_id=Rv3324A Chromosome ena exon 3710245 3710379 . - . Parent=transcript:Rv3324A;Name=Rv3324A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3324A-1;rank=1 ### -Chromosome ena_mobile_element biological_region 3710382 3711736 . + . external_name=IS6110-14%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 3710433 3710759 . + . ID=gene:Rv3325;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3325;logic_name=ena +Chromosome ena_mobile_element biological_region 3710382 3711736 . + . external_name=IS6110-14%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 3710433 3710759 . + . ID=gene:Rv3325;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3325;logic_name=ena Chromosome ena mRNA 3710433 3710759 . + . ID=transcript:Rv3325;Parent=gene:Rv3325;biotype=protein_coding;transcript_id=Rv3325 Chromosome ena exon 3710433 3710759 . + . Parent=transcript:Rv3325;Name=Rv3325-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3325-1;rank=1 Chromosome ena CDS 3710433 3710759 . + 0 ID=CDS:Rv3325;Parent=transcript:Rv3325;protein_id=Rv3325 ### -Chromosome ena gene 3710708 3711694 . + . ID=gene:Rv3326;biotype=protein_coding;description=Probable transposase;gene_id=Rv3326;logic_name=ena +Chromosome ena gene 3710708 3711694 . + . ID=gene:Rv3326;biotype=protein_coding;description=Probable transposase;gene_id=Rv3326;logic_name=ena Chromosome ena mRNA 3710708 3711694 . + . ID=transcript:Rv3326;Parent=gene:Rv3326;biotype=protein_coding;transcript_id=Rv3326 Chromosome ena exon 3710708 3711694 . + . Parent=transcript:Rv3326;Name=Rv3326-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3326-1;rank=1 Chromosome ena CDS 3710708 3711694 . + 0 ID=CDS:Rv3326;Parent=transcript:Rv3326;protein_id=Rv3326 ### -Chromosome ena_mobile_element biological_region 3711737 3712822 . + . external_name=IS1547-2%2C len: 1086 nt. Region corresponding to Insertion sequence IS1547%2C positions 1982 3067 in EM_NEW:MTY13470.;logic_name=ena_mobile_element -Chromosome ena gene 3711749 3713461 . + . ID=gene:Rv3327;biotype=protein_coding;description=Probable transposase fusion protein;gene_id=Rv3327;logic_name=ena +Chromosome ena_mobile_element biological_region 3711737 3712822 . + . external_name=IS1547-2%2C len: 1086 nt. Region corresponding to Insertion sequence IS1547%2C positions 1982 3067 in EM_NEW:MTY13470.;logic_name=ena_mobile_element +Chromosome ena gene 3711749 3713461 . + . ID=gene:Rv3327;biotype=protein_coding;description=Probable transposase fusion protein;gene_id=Rv3327;logic_name=ena Chromosome ena mRNA 3711749 3713461 . + . ID=transcript:Rv3327;Parent=gene:Rv3327;biotype=protein_coding;transcript_id=Rv3327 Chromosome ena exon 3711749 3713461 . + . Parent=transcript:Rv3327;Name=Rv3327-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3327-1;rank=1 Chromosome ena CDS 3711749 3713461 . + 0 ID=CDS:Rv3327;Parent=transcript:Rv3327;protein_id=Rv3327 ### -Chromosome ena gene 3713394 3714332 . - . ID=gene:Rv3328c;Name=sigJ;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor (fragment) SigJ;gene_id=Rv3328c;logic_name=ena +Chromosome ena gene 3713394 3714332 . - . ID=gene:Rv3328c;Name=sigJ;biotype=protein_coding;description=Probable alternative RNA polymerase sigma factor (fragment) SigJ;gene_id=Rv3328c;logic_name=ena Chromosome ena mRNA 3713394 3714332 . - . ID=transcript:Rv3328c;Parent=gene:Rv3328c;Name=sigJ-1;biotype=protein_coding;transcript_id=Rv3328c Chromosome ena exon 3713394 3714332 . - . Parent=transcript:Rv3328c;Name=Rv3328c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3328c-1;rank=1 Chromosome ena CDS 3713394 3714332 . - 0 ID=CDS:Rv3328c;Parent=transcript:Rv3328c;protein_id=Rv3328c ### -Chromosome ena gene 3714392 3715708 . + . ID=gene:Rv3329;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv3329;logic_name=ena +Chromosome ena gene 3714392 3715708 . + . ID=gene:Rv3329;biotype=protein_coding;description=Probable aminotransferase;gene_id=Rv3329;logic_name=ena Chromosome ena mRNA 3714392 3715708 . + . ID=transcript:Rv3329;Parent=gene:Rv3329;biotype=protein_coding;transcript_id=Rv3329 Chromosome ena exon 3714392 3715708 . + . Parent=transcript:Rv3329;Name=Rv3329-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3329-1;rank=1 Chromosome ena CDS 3714392 3715708 . + 0 ID=CDS:Rv3329;Parent=transcript:Rv3329;protein_id=Rv3329 ### -Chromosome ena gene 3715777 3716994 . + . ID=gene:Rv3330;Name=dacB1;biotype=protein_coding;description=Probable penicillin-binding protein DacB1 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase);gene_id=Rv3330;logic_name=ena +Chromosome ena gene 3715777 3716994 . + . ID=gene:Rv3330;Name=dacB1;biotype=protein_coding;description=Probable penicillin-binding protein DacB1 (D-alanyl-D-alanine carboxypeptidase) (DD-peptidase) (DD-carboxypeptidase) (PBP) (DD-transpeptidase) (serine-type D-ala-D-ala carboxypeptidase) (D-amino acid hydrolase);gene_id=Rv3330;logic_name=ena Chromosome ena mRNA 3715777 3716994 . + . ID=transcript:Rv3330;Parent=gene:Rv3330;Name=dacB1-1;biotype=protein_coding;transcript_id=Rv3330 Chromosome ena exon 3715777 3716994 . + . Parent=transcript:Rv3330;Name=Rv3330-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3330-1;rank=1 Chromosome ena CDS 3715777 3716994 . + 0 ID=CDS:Rv3330;Parent=transcript:Rv3330;protein_id=Rv3330 ### -Chromosome ena gene 3717090 3718598 . + . ID=gene:Rv3331;Name=sugI;biotype=protein_coding;description=Probable sugar-transport integral membrane protein SugI;gene_id=Rv3331;logic_name=ena +Chromosome ena gene 3717090 3718598 . + . ID=gene:Rv3331;Name=sugI;biotype=protein_coding;description=Probable sugar-transport integral membrane protein SugI;gene_id=Rv3331;logic_name=ena Chromosome ena mRNA 3717090 3718598 . + . ID=transcript:Rv3331;Parent=gene:Rv3331;Name=sugI-1;biotype=protein_coding;transcript_id=Rv3331 Chromosome ena exon 3717090 3718598 . + . Parent=transcript:Rv3331;Name=Rv3331-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3331-1;rank=1 Chromosome ena CDS 3717090 3718598 . + 0 ID=CDS:Rv3331;Parent=transcript:Rv3331;protein_id=Rv3331 ### -Chromosome ena gene 3718595 3719746 . + . ID=gene:Rv3332;Name=nagA;biotype=protein_coding;description=Probable N-acetylglucosamine-6-phosphate deacetylase NagA (GlcNAc 6-P deacetylase);gene_id=Rv3332;logic_name=ena +Chromosome ena gene 3718595 3719746 . + . ID=gene:Rv3332;Name=nagA;biotype=protein_coding;description=Probable N-acetylglucosamine-6-phosphate deacetylase NagA (GlcNAc 6-P deacetylase);gene_id=Rv3332;logic_name=ena Chromosome ena mRNA 3718595 3719746 . + . ID=transcript:Rv3332;Parent=gene:Rv3332;Name=nagA-1;biotype=protein_coding;transcript_id=Rv3332 Chromosome ena exon 3718595 3719746 . + . Parent=transcript:Rv3332;Name=Rv3332-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3332-1;rank=1 Chromosome ena CDS 3718595 3719746 . + 0 ID=CDS:Rv3332;Parent=transcript:Rv3332;protein_id=Rv3332 ### -Chromosome ena gene 3719937 3720782 . - . ID=gene:Rv3333c;biotype=protein_coding;description=Hypothetical proline rich protein;gene_id=Rv3333c;logic_name=ena +Chromosome ena gene 3719937 3720782 . - . ID=gene:Rv3333c;biotype=protein_coding;description=Hypothetical proline rich protein;gene_id=Rv3333c;logic_name=ena Chromosome ena mRNA 3719937 3720782 . - . ID=transcript:Rv3333c;Parent=gene:Rv3333c;biotype=protein_coding;transcript_id=Rv3333c Chromosome ena exon 3719937 3720782 . - . Parent=transcript:Rv3333c;Name=Rv3333c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3333c-1;rank=1 Chromosome ena CDS 3719937 3720782 . - 0 ID=CDS:Rv3333c;Parent=transcript:Rv3333c;protein_id=Rv3333c ### -Chromosome ena gene 3721257 3721697 . + . ID=gene:Rv3334;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably MerR-family);gene_id=Rv3334;logic_name=ena +Chromosome ena gene 3721257 3721697 . + . ID=gene:Rv3334;biotype=protein_coding;description=Probable transcriptional regulatory protein (probably MerR-family);gene_id=Rv3334;logic_name=ena Chromosome ena mRNA 3721257 3721697 . + . ID=transcript:Rv3334;Parent=gene:Rv3334;biotype=protein_coding;transcript_id=Rv3334 Chromosome ena exon 3721257 3721697 . + . Parent=transcript:Rv3334;Name=Rv3334-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3334-1;rank=1 Chromosome ena CDS 3721257 3721697 . + 0 ID=CDS:Rv3334;Parent=transcript:Rv3334;protein_id=Rv3334 ### -Chromosome ena gene 3721731 3722600 . - . ID=gene:Rv3335c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3335c;logic_name=ena +Chromosome ena gene 3721731 3722600 . - . ID=gene:Rv3335c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3335c;logic_name=ena Chromosome ena mRNA 3721731 3722600 . - . ID=transcript:Rv3335c;Parent=gene:Rv3335c;biotype=protein_coding;transcript_id=Rv3335c Chromosome ena exon 3721731 3722600 . - . Parent=transcript:Rv3335c;Name=Rv3335c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3335c-1;rank=1 Chromosome ena CDS 3721731 3722600 . - 0 ID=CDS:Rv3335c;Parent=transcript:Rv3335c;protein_id=Rv3335c ### -Chromosome ena gene 3722621 3723631 . - . ID=gene:Rv3336c;Name=trpS;biotype=protein_coding;description=Probable tryptophanyl-tRNA synthetase TrpS (tryptophan--tRNA ligase) (TRPRS) (tryptophan translase);gene_id=Rv3336c;logic_name=ena +Chromosome ena gene 3722621 3723631 . - . ID=gene:Rv3336c;Name=trpS;biotype=protein_coding;description=Probable tryptophanyl-tRNA synthetase TrpS (tryptophan--tRNA ligase) (TRPRS) (tryptophan translase);gene_id=Rv3336c;logic_name=ena Chromosome ena mRNA 3722621 3723631 . - . ID=transcript:Rv3336c;Parent=gene:Rv3336c;Name=trpS-1;biotype=protein_coding;transcript_id=Rv3336c Chromosome ena exon 3722621 3723631 . - . Parent=transcript:Rv3336c;Name=Rv3336c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3336c-1;rank=1 Chromosome ena CDS 3722621 3723631 . - 0 ID=CDS:Rv3336c;Parent=transcript:Rv3336c;protein_id=Rv3336c ### -Chromosome ena gene 3723656 3724042 . + . ID=gene:Rv3337;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3337;logic_name=ena +Chromosome ena gene 3723656 3724042 . + . ID=gene:Rv3337;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3337;logic_name=ena Chromosome ena mRNA 3723656 3724042 . + . ID=transcript:Rv3337;Parent=gene:Rv3337;biotype=protein_coding;transcript_id=Rv3337 Chromosome ena exon 3723656 3724042 . + . Parent=transcript:Rv3337;Name=Rv3337-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3337-1;rank=1 Chromosome ena CDS 3723656 3724042 . + 0 ID=CDS:Rv3337;Parent=transcript:Rv3337;protein_id=Rv3337 ### -Chromosome ena gene 3723904 3724548 . + . ID=gene:Rv3338;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3338;logic_name=ena +Chromosome ena gene 3723904 3724548 . + . ID=gene:Rv3338;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3338;logic_name=ena Chromosome ena mRNA 3723904 3724548 . + . ID=transcript:Rv3338;Parent=gene:Rv3338;biotype=protein_coding;transcript_id=Rv3338 Chromosome ena exon 3723904 3724548 . + . Parent=transcript:Rv3338;Name=Rv3338-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3338-1;rank=1 Chromosome ena CDS 3723904 3724548 . + 0 ID=CDS:Rv3338;Parent=transcript:Rv3338;protein_id=Rv3338 ### -Chromosome ena gene 3724615 3725844 . - . ID=gene:Rv3339c;Name=icd1;biotype=protein_coding;description=Probable isocitrate dehydrogenase [NADP] Icd1 (oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP);gene_id=Rv3339c;logic_name=ena +Chromosome ena gene 3724615 3725844 . - . ID=gene:Rv3339c;Name=icd1;biotype=protein_coding;description=Probable isocitrate dehydrogenase [NADP] Icd1 (oxalosuccinate decarboxylase) (IDH) (NADP+-specific ICDH) (IDP);gene_id=Rv3339c;logic_name=ena Chromosome ena mRNA 3724615 3725844 . - . ID=transcript:Rv3339c;Parent=gene:Rv3339c;Name=icd1-1;biotype=protein_coding;transcript_id=Rv3339c Chromosome ena exon 3724615 3725844 . - . Parent=transcript:Rv3339c;Name=Rv3339c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3339c-1;rank=1 Chromosome ena CDS 3724615 3725844 . - 0 ID=CDS:Rv3339c;Parent=transcript:Rv3339c;protein_id=Rv3339c ### -Chromosome ena gene 3726127 3727476 . + . ID=gene:Rv3340;Name=metC;biotype=protein_coding;description=Probable O-acetylhomoserine sulfhydrylase MetC (homocysteine synthase) (O-acetylhomoserine (thiol)-lyase) (OAH sulfhydrylase) (O-acetyl-L-homoserine sulfhydrylase);gene_id=Rv3340;logic_name=ena +Chromosome ena gene 3726127 3727476 . + . ID=gene:Rv3340;Name=metC;biotype=protein_coding;description=Probable O-acetylhomoserine sulfhydrylase MetC (homocysteine synthase) (O-acetylhomoserine (thiol)-lyase) (OAH sulfhydrylase) (O-acetyl-L-homoserine sulfhydrylase);gene_id=Rv3340;logic_name=ena Chromosome ena mRNA 3726127 3727476 . + . ID=transcript:Rv3340;Parent=gene:Rv3340;Name=metC-1;biotype=protein_coding;transcript_id=Rv3340 Chromosome ena exon 3726127 3727476 . + . Parent=transcript:Rv3340;Name=Rv3340-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3340-1;rank=1 Chromosome ena CDS 3726127 3727476 . + 0 ID=CDS:Rv3340;Parent=transcript:Rv3340;protein_id=Rv3340 ### -Chromosome ena gene 3727488 3728627 . + . ID=gene:Rv3341;Name=metA;biotype=protein_coding;description=Probable homoserine O-acetyltransferase MetA (homoserine O-trans-acetylase) (homoserine transacetylase) (HTA);gene_id=Rv3341;logic_name=ena +Chromosome ena gene 3727488 3728627 . + . ID=gene:Rv3341;Name=metA;biotype=protein_coding;description=Probable homoserine O-acetyltransferase MetA (homoserine O-trans-acetylase) (homoserine transacetylase) (HTA);gene_id=Rv3341;logic_name=ena Chromosome ena mRNA 3727488 3728627 . + . ID=transcript:Rv3341;Parent=gene:Rv3341;Name=metA-1;biotype=protein_coding;transcript_id=Rv3341 Chromosome ena exon 3727488 3728627 . + . Parent=transcript:Rv3341;Name=Rv3341-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3341-1;rank=1 Chromosome ena CDS 3727488 3728627 . + 0 ID=CDS:Rv3341;Parent=transcript:Rv3341;protein_id=Rv3341 ### -Chromosome ena gene 3728624 3729355 . + . ID=gene:Rv3342;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv3342;logic_name=ena +Chromosome ena gene 3728624 3729355 . + . ID=gene:Rv3342;biotype=protein_coding;description=Possible methyltransferase (methylase);gene_id=Rv3342;logic_name=ena Chromosome ena mRNA 3728624 3729355 . + . ID=transcript:Rv3342;Parent=gene:Rv3342;biotype=protein_coding;transcript_id=Rv3342 Chromosome ena exon 3728624 3729355 . + . Parent=transcript:Rv3342;Name=Rv3342-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3342-1;rank=1 Chromosome ena CDS 3728624 3729355 . + 0 ID=CDS:Rv3342;Parent=transcript:Rv3342;protein_id=Rv3342 ### -Chromosome ena gene 3729364 3736935 . - . ID=gene:Rv3343c;Name=PPE54;biotype=protein_coding;description=PPE family protein PPE54;gene_id=Rv3343c;logic_name=ena +Chromosome ena gene 3729364 3736935 . - . ID=gene:Rv3343c;Name=PPE54;biotype=protein_coding;description=PPE family protein PPE54;gene_id=Rv3343c;logic_name=ena Chromosome ena mRNA 3729364 3736935 . - . ID=transcript:Rv3343c;Parent=gene:Rv3343c;Name=PPE54-1;biotype=protein_coding;transcript_id=Rv3343c Chromosome ena exon 3729364 3736935 . - . Parent=transcript:Rv3343c;Name=Rv3343c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3343c-1;rank=1 Chromosome ena CDS 3729364 3736935 . - 0 ID=CDS:Rv3343c;Parent=transcript:Rv3343c;protein_id=Rv3343c ### -Chromosome ena gene 3736984 3738438 . - . ID=gene:Rv3344c;Name=PE_PGRS49;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS49;gene_id=Rv3344c;logic_name=ena +Chromosome ena gene 3736984 3738438 . - . ID=gene:Rv3344c;Name=PE_PGRS49;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS49;gene_id=Rv3344c;logic_name=ena Chromosome ena mRNA 3736984 3738438 . - . ID=transcript:Rv3344c;Parent=gene:Rv3344c;Name=PE_PGRS49-1;biotype=protein_coding;transcript_id=Rv3344c Chromosome ena exon 3736984 3738438 . - . Parent=transcript:Rv3344c;Name=Rv3344c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3344c-1;rank=1 Chromosome ena CDS 3736984 3738438 . - 0 ID=CDS:Rv3344c;Parent=transcript:Rv3344c;protein_id=Rv3344c ### -Chromosome ena gene 3738158 3742774 . - . ID=gene:Rv3345c;Name=PE_PGRS50;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS50;gene_id=Rv3345c;logic_name=ena +Chromosome ena gene 3738158 3742774 . - . ID=gene:Rv3345c;Name=PE_PGRS50;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS50;gene_id=Rv3345c;logic_name=ena Chromosome ena mRNA 3738158 3742774 . - . ID=transcript:Rv3345c;Parent=gene:Rv3345c;Name=PE_PGRS50-1;biotype=protein_coding;transcript_id=Rv3345c Chromosome ena exon 3738158 3742774 . - . Parent=transcript:Rv3345c;Name=Rv3345c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3345c-1;rank=1 Chromosome ena CDS 3738158 3742774 . - 0 ID=CDS:Rv3345c;Parent=transcript:Rv3345c;protein_id=Rv3345c ### -Chromosome ena gene 3743198 3743455 . - . ID=gene:Rv3346c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv3346c;logic_name=ena +Chromosome ena gene 3743198 3743455 . - . ID=gene:Rv3346c;biotype=protein_coding;description=Conserved transmembrane protein;gene_id=Rv3346c;logic_name=ena Chromosome ena mRNA 3743198 3743455 . - . ID=transcript:Rv3346c;Parent=gene:Rv3346c;biotype=protein_coding;transcript_id=Rv3346c Chromosome ena exon 3743198 3743455 . - . Parent=transcript:Rv3346c;Name=Rv3346c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3346c-1;rank=1 Chromosome ena CDS 3743198 3743455 . - 0 ID=CDS:Rv3346c;Parent=transcript:Rv3346c;protein_id=Rv3346c ### -Chromosome ena gene 3743711 3753184 . - . ID=gene:Rv3347c;Name=PPE55;biotype=protein_coding;description=PPE family protein PPE55;gene_id=Rv3347c;logic_name=ena +Chromosome ena gene 3743711 3753184 . - . ID=gene:Rv3347c;Name=PPE55;biotype=protein_coding;description=PPE family protein PPE55;gene_id=Rv3347c;logic_name=ena Chromosome ena mRNA 3743711 3753184 . - . ID=transcript:Rv3347c;Parent=gene:Rv3347c;Name=PPE55-1;biotype=protein_coding;transcript_id=Rv3347c Chromosome ena exon 3743711 3753184 . - . Parent=transcript:Rv3347c;Name=Rv3347c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3347c-1;rank=1 Chromosome ena CDS 3743711 3753184 . - 0 ID=CDS:Rv3347c;Parent=transcript:Rv3347c;protein_id=Rv3347c ### -Chromosome ena_mobile_element biological_region 3753765 3754253 . + . external_name=Rv3348%3B IS1608'%2C len: 489 nt. Insertion sequence IS1608'.;logic_name=ena_mobile_element -Chromosome ena gene 3753765 3754256 . + . ID=gene:Rv3348;biotype=protein_coding;description=Probable transposase;gene_id=Rv3348;logic_name=ena +Chromosome ena_mobile_element biological_region 3753765 3754253 . + . external_name=Rv3348%3B IS1608'%2C len: 489 nt. Insertion sequence IS1608'.;logic_name=ena_mobile_element +Chromosome ena gene 3753765 3754256 . + . ID=gene:Rv3348;biotype=protein_coding;description=Probable transposase;gene_id=Rv3348;logic_name=ena Chromosome ena mRNA 3753765 3754256 . + . ID=transcript:Rv3348;Parent=gene:Rv3348;biotype=protein_coding;transcript_id=Rv3348 Chromosome ena exon 3753765 3754256 . + . Parent=transcript:Rv3348;Name=Rv3348-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3348-1;rank=1 Chromosome ena CDS 3753765 3754256 . + 0 ID=CDS:Rv3348;Parent=transcript:Rv3348;protein_id=Rv3348 ### -Chromosome ena gene 3754293 3755033 . - . ID=gene:Rv3349c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3349c;logic_name=ena +Chromosome ena gene 3754293 3755033 . - . ID=gene:Rv3349c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3349c;logic_name=ena Chromosome ena mRNA 3754293 3755033 . - . ID=transcript:Rv3349c;Parent=gene:Rv3349c;biotype=protein_coding;transcript_id=Rv3349c Chromosome ena exon 3754293 3755033 . - . Parent=transcript:Rv3349c;Name=Rv3349c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3349c-1;rank=1 Chromosome ena CDS 3754293 3755033 . - 0 ID=CDS:Rv3349c;Parent=transcript:Rv3349c;protein_id=Rv3349c ### -Chromosome ena_mobile_element biological_region 3754296 3755033 . - . external_name=Rv3349c%3B IS1561'%2C len: 738 nt. Insertion sequence IS1561'.;logic_name=ena_mobile_element -Chromosome ena gene 3755952 3767102 . - . ID=gene:Rv3350c;Name=PPE56;biotype=protein_coding;description=PPE family protein PPE56;gene_id=Rv3350c;logic_name=ena +Chromosome ena_mobile_element biological_region 3754296 3755033 . - . external_name=Rv3349c%3B IS1561'%2C len: 738 nt. Insertion sequence IS1561'.;logic_name=ena_mobile_element +Chromosome ena gene 3755952 3767102 . - . ID=gene:Rv3350c;Name=PPE56;biotype=protein_coding;description=PPE family protein PPE56;gene_id=Rv3350c;logic_name=ena Chromosome ena mRNA 3755952 3767102 . - . ID=transcript:Rv3350c;Parent=gene:Rv3350c;Name=PPE56-1;biotype=protein_coding;transcript_id=Rv3350c Chromosome ena exon 3755952 3767102 . - . Parent=transcript:Rv3350c;Name=Rv3350c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3350c-1;rank=1 Chromosome ena CDS 3755952 3767102 . - 0 ID=CDS:Rv3350c;Parent=transcript:Rv3350c;protein_id=Rv3350c ### -Chromosome ena gene 3767346 3768140 . - . ID=gene:Rv3351c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3351c;logic_name=ena +Chromosome ena gene 3767346 3768140 . - . ID=gene:Rv3351c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3351c;logic_name=ena Chromosome ena mRNA 3767346 3768140 . - . ID=transcript:Rv3351c;Parent=gene:Rv3351c;biotype=protein_coding;transcript_id=Rv3351c Chromosome ena exon 3767346 3768140 . - . Parent=transcript:Rv3351c;Name=Rv3351c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3351c-1;rank=1 Chromosome ena CDS 3767346 3768140 . - 0 ID=CDS:Rv3351c;Parent=transcript:Rv3351c;protein_id=Rv3351c ### -Chromosome ena gene 3768222 3768593 . - . ID=gene:Rv3352c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3352c;logic_name=ena +Chromosome ena gene 3768222 3768593 . - . ID=gene:Rv3352c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3352c;logic_name=ena Chromosome ena mRNA 3768222 3768593 . - . ID=transcript:Rv3352c;Parent=gene:Rv3352c;biotype=protein_coding;transcript_id=Rv3352c Chromosome ena exon 3768222 3768593 . - . Parent=transcript:Rv3352c;Name=Rv3352c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3352c-1;rank=1 Chromosome ena CDS 3768222 3768593 . - 0 ID=CDS:Rv3352c;Parent=transcript:Rv3352c;protein_id=Rv3352c ### -Chromosome ena gene 3768736 3768996 . - . ID=gene:Rv3353c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3353c;logic_name=ena +Chromosome ena gene 3768736 3768996 . - . ID=gene:Rv3353c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3353c;logic_name=ena Chromosome ena mRNA 3768736 3768996 . - . ID=transcript:Rv3353c;Parent=gene:Rv3353c;biotype=protein_coding;transcript_id=Rv3353c Chromosome ena exon 3768736 3768996 . - . Parent=transcript:Rv3353c;Name=Rv3353c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3353c-1;rank=1 Chromosome ena CDS 3768736 3768996 . - 0 ID=CDS:Rv3353c;Parent=transcript:Rv3353c;protein_id=Rv3353c ### -Chromosome ena gene 3769111 3769500 . + . ID=gene:Rv3354;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3354;logic_name=ena +Chromosome ena gene 3769111 3769500 . + . ID=gene:Rv3354;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3354;logic_name=ena Chromosome ena mRNA 3769111 3769500 . + . ID=transcript:Rv3354;Parent=gene:Rv3354;biotype=protein_coding;transcript_id=Rv3354 Chromosome ena exon 3769111 3769500 . + . Parent=transcript:Rv3354;Name=Rv3354-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3354-1;rank=1 Chromosome ena CDS 3769111 3769500 . + 0 ID=CDS:Rv3354;Parent=transcript:Rv3354;protein_id=Rv3354 ### -Chromosome ena gene 3769514 3769807 . - . ID=gene:Rv3355c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv3355c;logic_name=ena +Chromosome ena gene 3769514 3769807 . - . ID=gene:Rv3355c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv3355c;logic_name=ena Chromosome ena mRNA 3769514 3769807 . - . ID=transcript:Rv3355c;Parent=gene:Rv3355c;biotype=protein_coding;transcript_id=Rv3355c Chromosome ena exon 3769514 3769807 . - . Parent=transcript:Rv3355c;Name=Rv3355c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3355c-1;rank=1 Chromosome ena CDS 3769514 3769807 . - 0 ID=CDS:Rv3355c;Parent=transcript:Rv3355c;protein_id=Rv3355c ### -Chromosome ena gene 3769804 3770649 . - . ID=gene:Rv3356c;Name=folD;biotype=protein_coding;description=Probable bifunctional protein FolD: methylenetetrahydrofolate dehydrogenase + methenyltetrahydrofolate cyclohydrolase;gene_id=Rv3356c;logic_name=ena +Chromosome ena gene 3769804 3770649 . - . ID=gene:Rv3356c;Name=folD;biotype=protein_coding;description=Probable bifunctional protein FolD: methylenetetrahydrofolate dehydrogenase + methenyltetrahydrofolate cyclohydrolase;gene_id=Rv3356c;logic_name=ena Chromosome ena mRNA 3769804 3770649 . - . ID=transcript:Rv3356c;Parent=gene:Rv3356c;Name=folD-1;biotype=protein_coding;transcript_id=Rv3356c Chromosome ena exon 3769804 3770649 . - . Parent=transcript:Rv3356c;Name=Rv3356c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3356c-1;rank=1 Chromosome ena CDS 3769804 3770649 . - 0 ID=CDS:Rv3356c;Parent=transcript:Rv3356c;protein_id=Rv3356c ### -Chromosome ena gene 3770773 3771048 . + . ID=gene:Rv3357;Name=relJ;biotype=protein_coding;description=Antitoxin RelJ;gene_id=Rv3357;logic_name=ena +Chromosome ena gene 3770773 3771048 . + . ID=gene:Rv3357;Name=relJ;biotype=protein_coding;description=Antitoxin RelJ;gene_id=Rv3357;logic_name=ena Chromosome ena mRNA 3770773 3771048 . + . ID=transcript:Rv3357;Parent=gene:Rv3357;Name=relJ-1;biotype=protein_coding;transcript_id=Rv3357 Chromosome ena exon 3770773 3771048 . + . Parent=transcript:Rv3357;Name=Rv3357-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3357-1;rank=1 Chromosome ena CDS 3770773 3771048 . + 0 ID=CDS:Rv3357;Parent=transcript:Rv3357;protein_id=Rv3357 ### -Chromosome ena gene 3771045 3771302 . + . ID=gene:Rv3358;Name=relK;biotype=protein_coding;description=Toxin RelK;gene_id=Rv3358;logic_name=ena +Chromosome ena gene 3771045 3771302 . + . ID=gene:Rv3358;Name=relK;biotype=protein_coding;description=Toxin RelK;gene_id=Rv3358;logic_name=ena Chromosome ena mRNA 3771045 3771302 . + . ID=transcript:Rv3358;Parent=gene:Rv3358;Name=relK-1;biotype=protein_coding;transcript_id=Rv3358 Chromosome ena exon 3771045 3771302 . + . Parent=transcript:Rv3358;Name=Rv3358-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3358-1;rank=1 Chromosome ena CDS 3771045 3771302 . + 0 ID=CDS:Rv3358;Parent=transcript:Rv3358;protein_id=Rv3358 ### -Chromosome ena gene 3771344 3772534 . + . ID=gene:Rv3359;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3359;logic_name=ena +Chromosome ena gene 3771344 3772534 . + . ID=gene:Rv3359;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3359;logic_name=ena Chromosome ena mRNA 3771344 3772534 . + . ID=transcript:Rv3359;Parent=gene:Rv3359;biotype=protein_coding;transcript_id=Rv3359 Chromosome ena exon 3771344 3772534 . + . Parent=transcript:Rv3359;Name=Rv3359-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3359-1;rank=1 Chromosome ena CDS 3771344 3772534 . + 0 ID=CDS:Rv3359;Parent=transcript:Rv3359;protein_id=Rv3359 ### -Chromosome ena gene 3772651 3773019 . + . ID=gene:Rv3360;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3360;logic_name=ena +Chromosome ena gene 3772651 3773019 . + . ID=gene:Rv3360;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3360;logic_name=ena Chromosome ena mRNA 3772651 3773019 . + . ID=transcript:Rv3360;Parent=gene:Rv3360;biotype=protein_coding;transcript_id=Rv3360 Chromosome ena exon 3772651 3773019 . + . Parent=transcript:Rv3360;Name=Rv3360-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3360-1;rank=1 Chromosome ena CDS 3772651 3773019 . + 0 ID=CDS:Rv3360;Parent=transcript:Rv3360;protein_id=Rv3360 ### -Chromosome ena gene 3773016 3773567 . - . ID=gene:Rv3361c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3361c;logic_name=ena +Chromosome ena gene 3773016 3773567 . - . ID=gene:Rv3361c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3361c;logic_name=ena Chromosome ena mRNA 3773016 3773567 . - . ID=transcript:Rv3361c;Parent=gene:Rv3361c;biotype=protein_coding;transcript_id=Rv3361c Chromosome ena exon 3773016 3773567 . - . Parent=transcript:Rv3361c;Name=Rv3361c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3361c-1;rank=1 Chromosome ena CDS 3773016 3773567 . - 0 ID=CDS:Rv3361c;Parent=transcript:Rv3361c;protein_id=Rv3361c ### -Chromosome ena gene 3773574 3774155 . - . ID=gene:Rv3362c;biotype=protein_coding;description=Probable ATP/GTP-binding protein;gene_id=Rv3362c;logic_name=ena +Chromosome ena gene 3773574 3774155 . - . ID=gene:Rv3362c;biotype=protein_coding;description=Probable ATP/GTP-binding protein;gene_id=Rv3362c;logic_name=ena Chromosome ena mRNA 3773574 3774155 . - . ID=transcript:Rv3362c;Parent=gene:Rv3362c;biotype=protein_coding;transcript_id=Rv3362c Chromosome ena exon 3773574 3774155 . - . Parent=transcript:Rv3362c;Name=Rv3362c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3362c-1;rank=1 Chromosome ena CDS 3773574 3774155 . - 0 ID=CDS:Rv3362c;Parent=transcript:Rv3362c;protein_id=Rv3362c ### -Chromosome ena gene 3774136 3774504 . - . ID=gene:Rv3363c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3363c;logic_name=ena +Chromosome ena gene 3774136 3774504 . - . ID=gene:Rv3363c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3363c;logic_name=ena Chromosome ena mRNA 3774136 3774504 . - . ID=transcript:Rv3363c;Parent=gene:Rv3363c;biotype=protein_coding;transcript_id=Rv3363c Chromosome ena exon 3774136 3774504 . - . Parent=transcript:Rv3363c;Name=Rv3363c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3363c-1;rank=1 Chromosome ena CDS 3774136 3774504 . - 0 ID=CDS:Rv3363c;Parent=transcript:Rv3363c;protein_id=Rv3363c ### -Chromosome ena gene 3774482 3774874 . - . ID=gene:Rv3364c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3364c;logic_name=ena +Chromosome ena gene 3774482 3774874 . - . ID=gene:Rv3364c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3364c;logic_name=ena Chromosome ena mRNA 3774482 3774874 . - . ID=transcript:Rv3364c;Parent=gene:Rv3364c;biotype=protein_coding;transcript_id=Rv3364c Chromosome ena exon 3774482 3774874 . - . Parent=transcript:Rv3364c;Name=Rv3364c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3364c-1;rank=1 Chromosome ena CDS 3774482 3774874 . - 0 ID=CDS:Rv3364c;Parent=transcript:Rv3364c;protein_id=Rv3364c ### -Chromosome ena gene 3774871 3777501 . - . ID=gene:Rv3365c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3365c;logic_name=ena +Chromosome ena gene 3774871 3777501 . - . ID=gene:Rv3365c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3365c;logic_name=ena Chromosome ena mRNA 3774871 3777501 . - . ID=transcript:Rv3365c;Parent=gene:Rv3365c;biotype=protein_coding;transcript_id=Rv3365c Chromosome ena exon 3774871 3777501 . - . Parent=transcript:Rv3365c;Name=Rv3365c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3365c-1;rank=1 Chromosome ena CDS 3774871 3777501 . - 0 ID=CDS:Rv3365c;Parent=transcript:Rv3365c;protein_id=Rv3365c ### -Chromosome ena gene 3777737 3778201 . + . ID=gene:Rv3366;Name=spoU;biotype=protein_coding;description=Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase);gene_id=Rv3366;logic_name=ena +Chromosome ena gene 3777737 3778201 . + . ID=gene:Rv3366;Name=spoU;biotype=protein_coding;description=Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase);gene_id=Rv3366;logic_name=ena Chromosome ena mRNA 3777737 3778201 . + . ID=transcript:Rv3366;Parent=gene:Rv3366;Name=spoU-1;biotype=protein_coding;transcript_id=Rv3366 Chromosome ena exon 3777737 3778201 . + . Parent=transcript:Rv3366;Name=Rv3366-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3366-1;rank=1 Chromosome ena CDS 3777737 3778201 . + 0 ID=CDS:Rv3366;Parent=transcript:Rv3366;protein_id=Rv3366 ### -Chromosome ena gene 3778568 3780334 . + . ID=gene:Rv3367;Name=PE_PGRS51;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS51;gene_id=Rv3367;logic_name=ena +Chromosome ena gene 3778568 3780334 . + . ID=gene:Rv3367;Name=PE_PGRS51;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS51;gene_id=Rv3367;logic_name=ena Chromosome ena mRNA 3778568 3780334 . + . ID=transcript:Rv3367;Parent=gene:Rv3367;Name=PE_PGRS51-1;biotype=protein_coding;transcript_id=Rv3367 Chromosome ena exon 3778568 3780334 . + . Parent=transcript:Rv3367;Name=Rv3367-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3367-1;rank=1 Chromosome ena CDS 3778568 3780334 . + 0 ID=CDS:Rv3367;Parent=transcript:Rv3367;protein_id=Rv3367 ### -Chromosome ena gene 3780335 3780979 . - . ID=gene:Rv3368c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3368c;logic_name=ena +Chromosome ena gene 3780335 3780979 . - . ID=gene:Rv3368c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3368c;logic_name=ena Chromosome ena mRNA 3780335 3780979 . - . ID=transcript:Rv3368c;Parent=gene:Rv3368c;biotype=protein_coding;transcript_id=Rv3368c Chromosome ena exon 3780335 3780979 . - . Parent=transcript:Rv3368c;Name=Rv3368c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3368c-1;rank=1 Chromosome ena CDS 3780335 3780979 . - 0 ID=CDS:Rv3368c;Parent=transcript:Rv3368c;protein_id=Rv3368c ### -Chromosome ena gene 3780978 3781412 . + . ID=gene:Rv3369;biotype=protein_coding;description=Conserved protein;gene_id=Rv3369;logic_name=ena +Chromosome ena gene 3780978 3781412 . + . ID=gene:Rv3369;biotype=protein_coding;description=Conserved protein;gene_id=Rv3369;logic_name=ena Chromosome ena mRNA 3780978 3781412 . + . ID=transcript:Rv3369;Parent=gene:Rv3369;biotype=protein_coding;transcript_id=Rv3369 Chromosome ena exon 3780978 3781412 . + . Parent=transcript:Rv3369;Name=Rv3369-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3369-1;rank=1 Chromosome ena CDS 3780978 3781412 . + 0 ID=CDS:Rv3369;Parent=transcript:Rv3369;protein_id=Rv3369 ### -Chromosome ena gene 3781501 3784740 . - . ID=gene:Rv3370c;Name=dnaE2;biotype=protein_coding;description=Probable DNA polymerase III (alpha chain) DnaE2 (DNA nucleotidyltransferase);gene_id=Rv3370c;logic_name=ena +Chromosome ena gene 3781501 3784740 . - . ID=gene:Rv3370c;Name=dnaE2;biotype=protein_coding;description=Probable DNA polymerase III (alpha chain) DnaE2 (DNA nucleotidyltransferase);gene_id=Rv3370c;logic_name=ena Chromosome ena mRNA 3781501 3784740 . - . ID=transcript:Rv3370c;Parent=gene:Rv3370c;Name=dnaE2-1;biotype=protein_coding;transcript_id=Rv3370c Chromosome ena exon 3781501 3784740 . - . Parent=transcript:Rv3370c;Name=Rv3370c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3370c-1;rank=1 Chromosome ena CDS 3781501 3784740 . - 0 ID=CDS:Rv3370c;Parent=transcript:Rv3370c;protein_id=Rv3370c ### -Chromosome ena gene 3784932 3786272 . + . ID=gene:Rv3371;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3371;logic_name=ena +Chromosome ena gene 3784932 3786272 . + . ID=gene:Rv3371;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3371;logic_name=ena Chromosome ena mRNA 3784932 3786272 . + . ID=transcript:Rv3371;Parent=gene:Rv3371;biotype=protein_coding;transcript_id=Rv3371 Chromosome ena exon 3784932 3786272 . + . Parent=transcript:Rv3371;Name=Rv3371-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3371-1;rank=1 Chromosome ena CDS 3784932 3786272 . + 0 ID=CDS:Rv3371;Parent=transcript:Rv3371;protein_id=Rv3371 ### -Chromosome ena gene 3786314 3787489 . + . ID=gene:Rv3372;Name=otsB2;biotype=protein_coding;description=Trehalose 6-phosphate phosphatase OtsB2 (trehalose-phosphatase) (TPP);gene_id=Rv3372;logic_name=ena +Chromosome ena gene 3786314 3787489 . + . ID=gene:Rv3372;Name=otsB2;biotype=protein_coding;description=Trehalose 6-phosphate phosphatase OtsB2 (trehalose-phosphatase) (TPP);gene_id=Rv3372;logic_name=ena Chromosome ena mRNA 3786314 3787489 . + . ID=transcript:Rv3372;Parent=gene:Rv3372;Name=otsB2-1;biotype=protein_coding;transcript_id=Rv3372 Chromosome ena exon 3786314 3787489 . + . Parent=transcript:Rv3372;Name=Rv3372-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3372-1;rank=1 Chromosome ena CDS 3786314 3787489 . + 0 ID=CDS:Rv3372;Parent=transcript:Rv3372;protein_id=Rv3372 ### -Chromosome ena gene 3787726 3788367 . + . ID=gene:Rv3373;Name=echA18;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA18 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3373;logic_name=ena +Chromosome ena gene 3787726 3788367 . + . ID=gene:Rv3373;Name=echA18;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA18 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3373;logic_name=ena Chromosome ena mRNA 3787726 3788367 . + . ID=transcript:Rv3373;Parent=gene:Rv3373;Name=echA18-1;biotype=protein_coding;transcript_id=Rv3373 Chromosome ena exon 3787726 3788367 . + . Parent=transcript:Rv3373;Name=Rv3373-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3373-1;rank=1 Chromosome ena CDS 3787726 3788367 . + 0 ID=CDS:Rv3373;Parent=transcript:Rv3373;protein_id=Rv3373 ### -Chromosome ena gene 3788368 3788616 . + . ID=gene:Rv3374;Name=echA18.1;biotype=protein_coding;description=Probable enoyl-CoA hydratase (fragment) EchA18.1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3374;logic_name=ena +Chromosome ena gene 3788368 3788616 . + . ID=gene:Rv3374;Name=echA18.1;biotype=protein_coding;description=Probable enoyl-CoA hydratase (fragment) EchA18.1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3374;logic_name=ena Chromosome ena mRNA 3788368 3788616 . + . ID=transcript:Rv3374;Parent=gene:Rv3374;Name=echA18.1-1;biotype=protein_coding;transcript_id=Rv3374 Chromosome ena exon 3788368 3788616 . + . Parent=transcript:Rv3374;Name=Rv3374-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3374-1;rank=1 Chromosome ena CDS 3788368 3788616 . + 0 ID=CDS:Rv3374;Parent=transcript:Rv3374;protein_id=Rv3374 ### -Chromosome ena gene 3788621 3790048 . + . ID=gene:Rv3375;Name=amiD;biotype=protein_coding;description=Probable amidase AmiD (acylamidase) (acylase);gene_id=Rv3375;logic_name=ena +Chromosome ena gene 3788621 3790048 . + . ID=gene:Rv3375;Name=amiD;biotype=protein_coding;description=Probable amidase AmiD (acylamidase) (acylase);gene_id=Rv3375;logic_name=ena Chromosome ena mRNA 3788621 3790048 . + . ID=transcript:Rv3375;Parent=gene:Rv3375;Name=amiD-1;biotype=protein_coding;transcript_id=Rv3375 Chromosome ena exon 3788621 3790048 . + . Parent=transcript:Rv3375;Name=Rv3375-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3375-1;rank=1 Chromosome ena CDS 3788621 3790048 . + 0 ID=CDS:Rv3375;Parent=transcript:Rv3375;protein_id=Rv3375 ### -Chromosome ena gene 3790156 3790809 . + . ID=gene:Rv3376;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3376;logic_name=ena +Chromosome ena gene 3790156 3790809 . + . ID=gene:Rv3376;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3376;logic_name=ena Chromosome ena mRNA 3790156 3790809 . + . ID=transcript:Rv3376;Parent=gene:Rv3376;biotype=protein_coding;transcript_id=Rv3376 Chromosome ena exon 3790156 3790809 . + . Parent=transcript:Rv3376;Name=Rv3376-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3376-1;rank=1 Chromosome ena CDS 3790156 3790809 . + 0 ID=CDS:Rv3376;Parent=transcript:Rv3376;protein_id=Rv3376 ### -Chromosome ena gene 3790848 3792353 . - . ID=gene:Rv3377c;biotype=protein_coding;description=Halimadienyl diphosphate synthase;gene_id=Rv3377c;logic_name=ena +Chromosome ena gene 3790848 3792353 . - . ID=gene:Rv3377c;biotype=protein_coding;description=Halimadienyl diphosphate synthase;gene_id=Rv3377c;logic_name=ena Chromosome ena mRNA 3790848 3792353 . - . ID=transcript:Rv3377c;Parent=gene:Rv3377c;biotype=protein_coding;transcript_id=Rv3377c Chromosome ena exon 3790848 3792353 . - . Parent=transcript:Rv3377c;Name=Rv3377c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3377c-1;rank=1 Chromosome ena CDS 3790848 3792353 . - 0 ID=CDS:Rv3377c;Parent=transcript:Rv3377c;protein_id=Rv3377c ### -Chromosome ena gene 3792358 3793248 . - . ID=gene:Rv3378c;biotype=protein_coding;description=Diterpene synthase;gene_id=Rv3378c;logic_name=ena +Chromosome ena gene 3792358 3793248 . - . ID=gene:Rv3378c;biotype=protein_coding;description=Diterpene synthase;gene_id=Rv3378c;logic_name=ena Chromosome ena mRNA 3792358 3793248 . - . ID=transcript:Rv3378c;Parent=gene:Rv3378c;biotype=protein_coding;transcript_id=Rv3378c Chromosome ena exon 3792358 3793248 . - . Parent=transcript:Rv3378c;Name=Rv3378c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3378c-1;rank=1 Chromosome ena CDS 3792358 3793248 . - 0 ID=CDS:Rv3378c;Parent=transcript:Rv3378c;protein_id=Rv3378c ### -Chromosome ena gene 3793257 3794867 . - . ID=gene:Rv3379c;Name=dxs2;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate synthase Dxs2 (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS);gene_id=Rv3379c;logic_name=ena +Chromosome ena gene 3793257 3794867 . - . ID=gene:Rv3379c;Name=dxs2;biotype=protein_coding;description=Probable 1-deoxy-D-xylulose 5-phosphate synthase Dxs2 (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS);gene_id=Rv3379c;logic_name=ena Chromosome ena mRNA 3793257 3794867 . - . ID=transcript:Rv3379c;Parent=gene:Rv3379c;Name=dxs2-1;biotype=protein_coding;transcript_id=Rv3379c Chromosome ena exon 3793257 3794867 . - . Parent=transcript:Rv3379c;Name=Rv3379c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3379c-1;rank=1 Chromosome ena CDS 3793257 3794867 . - 0 ID=CDS:Rv3379c;Parent=transcript:Rv3379c;protein_id=Rv3379c ### -Chromosome ena_mobile_element biological_region 3795058 3796412 . + . external_name=IS6110-15%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 3795100 3796086 . - . ID=gene:Rv3380c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3380c;logic_name=ena +Chromosome ena_mobile_element biological_region 3795058 3796412 . + . external_name=IS6110-15%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 3795100 3796086 . - . ID=gene:Rv3380c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3380c;logic_name=ena Chromosome ena mRNA 3795100 3796086 . - . ID=transcript:Rv3380c;Parent=gene:Rv3380c;biotype=protein_coding;transcript_id=Rv3380c Chromosome ena exon 3795100 3796086 . - . Parent=transcript:Rv3380c;Name=Rv3380c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3380c-1;rank=1 Chromosome ena CDS 3795100 3796086 . - 0 ID=CDS:Rv3380c;Parent=transcript:Rv3380c;protein_id=Rv3380c ### -Chromosome ena gene 3796035 3796361 . - . ID=gene:Rv3381c;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3381c;logic_name=ena +Chromosome ena gene 3796035 3796361 . - . ID=gene:Rv3381c;biotype=protein_coding;description=Probable transposase for insertion sequence element IS6110 (fragment);gene_id=Rv3381c;logic_name=ena Chromosome ena mRNA 3796035 3796361 . - . ID=transcript:Rv3381c;Parent=gene:Rv3381c;biotype=protein_coding;transcript_id=Rv3381c Chromosome ena exon 3796035 3796361 . - . Parent=transcript:Rv3381c;Name=Rv3381c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3381c-1;rank=1 Chromosome ena CDS 3796035 3796361 . - 0 ID=CDS:Rv3381c;Parent=transcript:Rv3381c;protein_id=Rv3381c ### -Chromosome ena gene 3796448 3797437 . - . ID=gene:Rv3382c;Name=lytB1;biotype=protein_coding;description=Probable LYTB-related protein LytB1;gene_id=Rv3382c;logic_name=ena +Chromosome ena gene 3796448 3797437 . - . ID=gene:Rv3382c;Name=lytB1;biotype=protein_coding;description=Probable LYTB-related protein LytB1;gene_id=Rv3382c;logic_name=ena Chromosome ena mRNA 3796448 3797437 . - . ID=transcript:Rv3382c;Parent=gene:Rv3382c;Name=lytB1-1;biotype=protein_coding;transcript_id=Rv3382c Chromosome ena exon 3796448 3797437 . - . Parent=transcript:Rv3382c;Name=Rv3382c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3382c-1;rank=1 Chromosome ena CDS 3796448 3797437 . - 0 ID=CDS:Rv3382c;Parent=transcript:Rv3382c;protein_id=Rv3382c ### -Chromosome ena gene 3797437 3798489 . - . ID=gene:Rv3383c;Name=idsB;biotype=protein_coding;description=Possible polyprenyl synthetase IdsB (polyprenyl transferase) (polyprenyl diphosphate synthase);gene_id=Rv3383c;logic_name=ena +Chromosome ena gene 3797437 3798489 . - . ID=gene:Rv3383c;Name=idsB;biotype=protein_coding;description=Possible polyprenyl synthetase IdsB (polyprenyl transferase) (polyprenyl diphosphate synthase);gene_id=Rv3383c;logic_name=ena Chromosome ena mRNA 3797437 3798489 . - . ID=transcript:Rv3383c;Parent=gene:Rv3383c;Name=idsB-1;biotype=protein_coding;transcript_id=Rv3383c Chromosome ena exon 3797437 3798489 . - . Parent=transcript:Rv3383c;Name=Rv3383c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3383c-1;rank=1 Chromosome ena CDS 3797437 3798489 . - 0 ID=CDS:Rv3383c;Parent=transcript:Rv3383c;protein_id=Rv3383c ### -Chromosome ena gene 3799243 3799635 . - . ID=gene:Rv3384c;Name=vapC46;biotype=protein_coding;description=Possible toxin VapC46. Contains PIN domain.;gene_id=Rv3384c;logic_name=ena +Chromosome ena gene 3799243 3799635 . - . ID=gene:Rv3384c;Name=vapC46;biotype=protein_coding;description=Possible toxin VapC46. Contains PIN domain.;gene_id=Rv3384c;logic_name=ena Chromosome ena mRNA 3799243 3799635 . - . ID=transcript:Rv3384c;Parent=gene:Rv3384c;Name=vapC46-1;biotype=protein_coding;transcript_id=Rv3384c Chromosome ena exon 3799243 3799635 . - . Parent=transcript:Rv3384c;Name=Rv3384c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3384c-1;rank=1 Chromosome ena CDS 3799243 3799635 . - 0 ID=CDS:Rv3384c;Parent=transcript:Rv3384c;protein_id=Rv3384c ### -Chromosome ena gene 3799635 3799943 . - . ID=gene:Rv3385c;Name=vapB46;biotype=protein_coding;description=Possible antitoxin VapB46;gene_id=Rv3385c;logic_name=ena +Chromosome ena gene 3799635 3799943 . - . ID=gene:Rv3385c;Name=vapB46;biotype=protein_coding;description=Possible antitoxin VapB46;gene_id=Rv3385c;logic_name=ena Chromosome ena mRNA 3799635 3799943 . - . ID=transcript:Rv3385c;Parent=gene:Rv3385c;Name=vapB46-1;biotype=protein_coding;transcript_id=Rv3385c Chromosome ena exon 3799635 3799943 . - . Parent=transcript:Rv3385c;Name=Rv3385c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3385c-1;rank=1 Chromosome ena CDS 3799635 3799943 . - 0 ID=CDS:Rv3385c;Parent=transcript:Rv3385c;protein_id=Rv3385c ### -Chromosome ena_mobile_element biological_region 3799987 3801554 . + . external_name=IS1560-2%2C len: 1568 nt. Possible Insertion sequence element IS_1560. Second copy in MTCY10G2 from 11273 to 12919.;logic_name=ena_mobile_element -Chromosome ena gene 3800092 3800796 . + . ID=gene:Rv3386;biotype=protein_coding;description=Possible transposase;gene_id=Rv3386;logic_name=ena +Chromosome ena_mobile_element biological_region 3799987 3801554 . + . external_name=IS1560-2%2C len: 1568 nt. Possible Insertion sequence element IS_1560. Second copy in MTCY10G2 from 11273 to 12919.;logic_name=ena_mobile_element +Chromosome ena gene 3800092 3800796 . + . ID=gene:Rv3386;biotype=protein_coding;description=Possible transposase;gene_id=Rv3386;logic_name=ena Chromosome ena mRNA 3800092 3800796 . + . ID=transcript:Rv3386;Parent=gene:Rv3386;biotype=protein_coding;transcript_id=Rv3386 Chromosome ena exon 3800092 3800796 . + . Parent=transcript:Rv3386;Name=Rv3386-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3386-1;rank=1 Chromosome ena CDS 3800092 3800796 . + 0 ID=CDS:Rv3386;Parent=transcript:Rv3386;protein_id=Rv3386 ### -Chromosome ena gene 3800786 3801463 . + . ID=gene:Rv3387;biotype=protein_coding;description=Possible transposase;gene_id=Rv3387;logic_name=ena +Chromosome ena gene 3800786 3801463 . + . ID=gene:Rv3387;biotype=protein_coding;description=Possible transposase;gene_id=Rv3387;logic_name=ena Chromosome ena mRNA 3800786 3801463 . + . ID=transcript:Rv3387;Parent=gene:Rv3387;biotype=protein_coding;transcript_id=Rv3387 Chromosome ena exon 3800786 3801463 . + . Parent=transcript:Rv3387;Name=Rv3387-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3387-1;rank=1 Chromosome ena CDS 3800786 3801463 . + 0 ID=CDS:Rv3387;Parent=transcript:Rv3387;protein_id=Rv3387 ### -Chromosome ena gene 3801653 3803848 . + . ID=gene:Rv3388;Name=PE_PGRS52;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS52;gene_id=Rv3388;logic_name=ena +Chromosome ena gene 3801653 3803848 . + . ID=gene:Rv3388;Name=PE_PGRS52;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS52;gene_id=Rv3388;logic_name=ena Chromosome ena mRNA 3801653 3803848 . + . ID=transcript:Rv3388;Parent=gene:Rv3388;Name=PE_PGRS52-1;biotype=protein_coding;transcript_id=Rv3388 Chromosome ena exon 3801653 3803848 . + . Parent=transcript:Rv3388;Name=Rv3388-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3388-1;rank=1 Chromosome ena CDS 3801653 3803848 . + 0 ID=CDS:Rv3388;Parent=transcript:Rv3388;protein_id=Rv3388 ### -Chromosome ena gene 3803919 3804791 . - . ID=gene:Rv3389c;Name=htdY;biotype=protein_coding;description=Probable 3-hydroxyacyl-thioester dehydratase HtdY;gene_id=Rv3389c;logic_name=ena +Chromosome ena gene 3803919 3804791 . - . ID=gene:Rv3389c;Name=htdY;biotype=protein_coding;description=Probable 3-hydroxyacyl-thioester dehydratase HtdY;gene_id=Rv3389c;logic_name=ena Chromosome ena mRNA 3803919 3804791 . - . ID=transcript:Rv3389c;Parent=gene:Rv3389c;Name=htdY-1;biotype=protein_coding;transcript_id=Rv3389c Chromosome ena exon 3803919 3804791 . - . Parent=transcript:Rv3389c;Name=Rv3389c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3389c-1;rank=1 Chromosome ena CDS 3803919 3804791 . - 0 ID=CDS:Rv3389c;Parent=transcript:Rv3389c;protein_id=Rv3389c ### -Chromosome ena gene 3804865 3805575 . + . ID=gene:Rv3390;Name=lpqD;biotype=protein_coding;description=Probable conserved lipoprotein LpqD;gene_id=Rv3390;logic_name=ena +Chromosome ena gene 3804865 3805575 . + . ID=gene:Rv3390;Name=lpqD;biotype=protein_coding;description=Probable conserved lipoprotein LpqD;gene_id=Rv3390;logic_name=ena Chromosome ena mRNA 3804865 3805575 . + . ID=transcript:Rv3390;Parent=gene:Rv3390;Name=lpqD-1;biotype=protein_coding;transcript_id=Rv3390 Chromosome ena exon 3804865 3805575 . + . Parent=transcript:Rv3390;Name=Rv3390-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3390-1;rank=1 Chromosome ena CDS 3804865 3805575 . + 0 ID=CDS:Rv3390;Parent=transcript:Rv3390;protein_id=Rv3390 ### -Chromosome ena gene 3805621 3807573 . + . ID=gene:Rv3391;Name=acrA1;biotype=protein_coding;description=Possible multi-functional enzyme with acyl-CoA-reductase activity AcrA1;gene_id=Rv3391;logic_name=ena +Chromosome ena gene 3805621 3807573 . + . ID=gene:Rv3391;Name=acrA1;biotype=protein_coding;description=Possible multi-functional enzyme with acyl-CoA-reductase activity AcrA1;gene_id=Rv3391;logic_name=ena Chromosome ena mRNA 3805621 3807573 . + . ID=transcript:Rv3391;Parent=gene:Rv3391;Name=acrA1-1;biotype=protein_coding;transcript_id=Rv3391 Chromosome ena exon 3805621 3807573 . + . Parent=transcript:Rv3391;Name=Rv3391-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3391-1;rank=1 Chromosome ena CDS 3805621 3807573 . + 0 ID=CDS:Rv3391;Parent=transcript:Rv3391;protein_id=Rv3391 ### -Chromosome ena gene 3807574 3808437 . - . ID=gene:Rv3392c;Name=cmaA1;biotype=protein_coding;description=Cyclopropane-fatty-acyl-phospholipid synthase 1 CmaA1 (cyclopropane fatty acid synthase) (CFA synthase) (cyclopropane mycolic acid synthase 1);gene_id=Rv3392c;logic_name=ena +Chromosome ena gene 3807574 3808437 . - . ID=gene:Rv3392c;Name=cmaA1;biotype=protein_coding;description=Cyclopropane-fatty-acyl-phospholipid synthase 1 CmaA1 (cyclopropane fatty acid synthase) (CFA synthase) (cyclopropane mycolic acid synthase 1);gene_id=Rv3392c;logic_name=ena Chromosome ena mRNA 3807574 3808437 . - . ID=transcript:Rv3392c;Parent=gene:Rv3392c;Name=cmaA1-1;biotype=protein_coding;transcript_id=Rv3392c Chromosome ena exon 3807574 3808437 . - . Parent=transcript:Rv3392c;Name=Rv3392c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3392c-1;rank=1 Chromosome ena CDS 3807574 3808437 . - 0 ID=CDS:Rv3392c;Parent=transcript:Rv3392c;protein_id=Rv3392c ### -Chromosome ena gene 3808461 3809387 . + . ID=gene:Rv3393;Name=iunH;biotype=protein_coding;description=Probable nucleoside hydrolase IunH (purine nucleosidase);gene_id=Rv3393;logic_name=ena +Chromosome ena gene 3808461 3809387 . + . ID=gene:Rv3393;Name=iunH;biotype=protein_coding;description=Probable nucleoside hydrolase IunH (purine nucleosidase);gene_id=Rv3393;logic_name=ena Chromosome ena mRNA 3808461 3809387 . + . ID=transcript:Rv3393;Parent=gene:Rv3393;Name=iunH-1;biotype=protein_coding;transcript_id=Rv3393 Chromosome ena exon 3808461 3809387 . + . Parent=transcript:Rv3393;Name=Rv3393-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3393-1;rank=1 Chromosome ena CDS 3808461 3809387 . + 0 ID=CDS:Rv3393;Parent=transcript:Rv3393;protein_id=Rv3393 ### -Chromosome ena gene 3809442 3811025 . - . ID=gene:Rv3394c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3394c;logic_name=ena +Chromosome ena gene 3809442 3811025 . - . ID=gene:Rv3394c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3394c;logic_name=ena Chromosome ena mRNA 3809442 3811025 . - . ID=transcript:Rv3394c;Parent=gene:Rv3394c;biotype=protein_coding;transcript_id=Rv3394c Chromosome ena exon 3809442 3811025 . - . Parent=transcript:Rv3394c;Name=Rv3394c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3394c-1;rank=1 Chromosome ena CDS 3809442 3811025 . - 0 ID=CDS:Rv3394c;Parent=transcript:Rv3394c;protein_id=Rv3394c ### -Chromosome ena gene 3811022 3811636 . - . ID=gene:Rv3395c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3395c;logic_name=ena +Chromosome ena gene 3811022 3811636 . - . ID=gene:Rv3395c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3395c;logic_name=ena Chromosome ena mRNA 3811022 3811636 . - . ID=transcript:Rv3395c;Parent=gene:Rv3395c;biotype=protein_coding;transcript_id=Rv3395c Chromosome ena exon 3811022 3811636 . - . Parent=transcript:Rv3395c;Name=Rv3395c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3395c-1;rank=1 Chromosome ena CDS 3811022 3811636 . - 0 ID=CDS:Rv3395c;Parent=transcript:Rv3395c;protein_id=Rv3395c ### -Chromosome ena gene 3811719 3812345 . + . ID=gene:Rv3395A;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv3395A;logic_name=ena +Chromosome ena gene 3811719 3812345 . + . ID=gene:Rv3395A;biotype=protein_coding;description=Probable membrane protein;gene_id=Rv3395A;logic_name=ena Chromosome ena mRNA 3811719 3812345 . + . ID=transcript:Rv3395A;Parent=gene:Rv3395A;biotype=protein_coding;transcript_id=Rv3395A Chromosome ena exon 3811719 3812345 . + . Parent=transcript:Rv3395A;Name=Rv3395A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3395A-1;rank=1 Chromosome ena CDS 3811719 3812345 . + 0 ID=CDS:Rv3395A;Parent=transcript:Rv3395A;protein_id=Rv3395A ### -Chromosome ena gene 3812501 3814078 . - . ID=gene:Rv3396c;Name=guaA;biotype=protein_coding;description=Probable GMP synthase [glutamine-hydrolyzing] GuaA (glutamine amidotransferase) (GMP synthetase);gene_id=Rv3396c;logic_name=ena +Chromosome ena gene 3812501 3814078 . - . ID=gene:Rv3396c;Name=guaA;biotype=protein_coding;description=Probable GMP synthase [glutamine-hydrolyzing] GuaA (glutamine amidotransferase) (GMP synthetase);gene_id=Rv3396c;logic_name=ena Chromosome ena mRNA 3812501 3814078 . - . ID=transcript:Rv3396c;Parent=gene:Rv3396c;Name=guaA-1;biotype=protein_coding;transcript_id=Rv3396c Chromosome ena exon 3812501 3814078 . - . Parent=transcript:Rv3396c;Name=Rv3396c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3396c-1;rank=1 Chromosome ena CDS 3812501 3814078 . - 0 ID=CDS:Rv3396c;Parent=transcript:Rv3396c;protein_id=Rv3396c ### -Chromosome ena gene 3814090 3814998 . - . ID=gene:Rv3397c;Name=phyA;biotype=protein_coding;description=Probable phytoene synthase PhyA;gene_id=Rv3397c;logic_name=ena +Chromosome ena gene 3814090 3814998 . - . ID=gene:Rv3397c;Name=phyA;biotype=protein_coding;description=Probable phytoene synthase PhyA;gene_id=Rv3397c;logic_name=ena Chromosome ena mRNA 3814090 3814998 . - . ID=transcript:Rv3397c;Parent=gene:Rv3397c;Name=phyA-1;biotype=protein_coding;transcript_id=Rv3397c Chromosome ena exon 3814090 3814998 . - . Parent=transcript:Rv3397c;Name=Rv3397c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3397c-1;rank=1 Chromosome ena CDS 3814090 3814998 . - 0 ID=CDS:Rv3397c;Parent=transcript:Rv3397c;protein_id=Rv3397c ### -Chromosome ena gene 3815027 3816106 . - . ID=gene:Rv3398c;Name=idsA1;biotype=protein_coding;description=Probable multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 (GGPP synthetase) (ggppsase) (geranylgeranyl diphosphate synthase): dimethylallyltransferase (prenyltransferase) (geranyl-diphosphate synthase) + geranyltranstransferase (farnesyl-diphosphate synthase) (farnesyl-pyrophosphate synthetase) (farnesyl diphosphate synthetase) (FPP synthetase) + farnesyltranstransferase (geranylgeranyl-diphosphate synthase);gene_id=Rv3398c;logic_name=ena +Chromosome ena gene 3815027 3816106 . - . ID=gene:Rv3398c;Name=idsA1;biotype=protein_coding;description=Probable multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 (GGPP synthetase) (ggppsase) (geranylgeranyl diphosphate synthase): dimethylallyltransferase (prenyltransferase) (geranyl-diphosphate synthase) + geranyltranstransferase (farnesyl-diphosphate synthase) (farnesyl-pyrophosphate synthetase) (farnesyl diphosphate synthetase) (FPP synthetase) + farnesyltranstransferase (geranylgeranyl-diphosphate synthase);gene_id=Rv3398c;logic_name=ena Chromosome ena mRNA 3815027 3816106 . - . ID=transcript:Rv3398c;Parent=gene:Rv3398c;Name=idsA1-1;biotype=protein_coding;transcript_id=Rv3398c Chromosome ena exon 3815027 3816106 . - . Parent=transcript:Rv3398c;Name=Rv3398c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3398c-1;rank=1 Chromosome ena CDS 3815027 3816106 . - 0 ID=CDS:Rv3398c;Parent=transcript:Rv3398c;protein_id=Rv3398c ### -Chromosome ena gene 3816129 3817175 . + . ID=gene:Rv3399;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv3399;logic_name=ena +Chromosome ena gene 3816129 3817175 . + . ID=gene:Rv3399;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv3399;logic_name=ena Chromosome ena mRNA 3816129 3817175 . + . ID=transcript:Rv3399;Parent=gene:Rv3399;biotype=protein_coding;transcript_id=Rv3399 Chromosome ena exon 3816129 3817175 . + . Parent=transcript:Rv3399;Name=Rv3399-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3399-1;rank=1 Chromosome ena CDS 3816129 3817175 . + 0 ID=CDS:Rv3399;Parent=transcript:Rv3399;protein_id=Rv3399 ### -Chromosome ena gene 3817239 3818027 . + . ID=gene:Rv3400;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv3400;logic_name=ena +Chromosome ena gene 3817239 3818027 . + . ID=gene:Rv3400;biotype=protein_coding;description=Probable hydrolase;gene_id=Rv3400;logic_name=ena Chromosome ena mRNA 3817239 3818027 . + . ID=transcript:Rv3400;Parent=gene:Rv3400;biotype=protein_coding;transcript_id=Rv3400 Chromosome ena exon 3817239 3818027 . + . Parent=transcript:Rv3400;Name=Rv3400-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3400-1;rank=1 Chromosome ena CDS 3817239 3818027 . + 0 ID=CDS:Rv3400;Parent=transcript:Rv3400;protein_id=Rv3400 ### -Chromosome ena gene 3818042 3820402 . + . ID=gene:Rv3401;biotype=protein_coding;description=Conserved protein;gene_id=Rv3401;logic_name=ena +Chromosome ena gene 3818042 3820402 . + . ID=gene:Rv3401;biotype=protein_coding;description=Conserved protein;gene_id=Rv3401;logic_name=ena Chromosome ena mRNA 3818042 3820402 . + . ID=transcript:Rv3401;Parent=gene:Rv3401;biotype=protein_coding;transcript_id=Rv3401 Chromosome ena exon 3818042 3820402 . + . Parent=transcript:Rv3401;Name=Rv3401-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3401-1;rank=1 Chromosome ena CDS 3818042 3820402 . + 0 ID=CDS:Rv3401;Parent=transcript:Rv3401;protein_id=Rv3401 ### -Chromosome ena gene 3820653 3821891 . - . ID=gene:Rv3402c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3402c;logic_name=ena +Chromosome ena gene 3820653 3821891 . - . ID=gene:Rv3402c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3402c;logic_name=ena Chromosome ena mRNA 3820653 3821891 . - . ID=transcript:Rv3402c;Parent=gene:Rv3402c;biotype=protein_coding;transcript_id=Rv3402c Chromosome ena exon 3820653 3821891 . - . Parent=transcript:Rv3402c;Name=Rv3402c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3402c-1;rank=1 Chromosome ena CDS 3820653 3821891 . - 0 ID=CDS:Rv3402c;Parent=transcript:Rv3402c;protein_id=Rv3402c ### -Chromosome ena gene 3822262 3823863 . - . ID=gene:Rv3403c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3403c;logic_name=ena +Chromosome ena gene 3822262 3823863 . - . ID=gene:Rv3403c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3403c;logic_name=ena Chromosome ena mRNA 3822262 3823863 . - . ID=transcript:Rv3403c;Parent=gene:Rv3403c;biotype=protein_coding;transcript_id=Rv3403c Chromosome ena exon 3822262 3823863 . - . Parent=transcript:Rv3403c;Name=Rv3403c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3403c-1;rank=1 Chromosome ena CDS 3822262 3823863 . - 0 ID=CDS:Rv3403c;Parent=transcript:Rv3403c;protein_id=Rv3403c ### -Chromosome ena gene 3823880 3824584 . - . ID=gene:Rv3404c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3404c;logic_name=ena +Chromosome ena gene 3823880 3824584 . - . ID=gene:Rv3404c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3404c;logic_name=ena Chromosome ena mRNA 3823880 3824584 . - . ID=transcript:Rv3404c;Parent=gene:Rv3404c;biotype=protein_coding;transcript_id=Rv3404c Chromosome ena exon 3823880 3824584 . - . Parent=transcript:Rv3404c;Name=Rv3404c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3404c-1;rank=1 Chromosome ena CDS 3823880 3824584 . - 0 ID=CDS:Rv3404c;Parent=transcript:Rv3404c;protein_id=Rv3404c ### -Chromosome ena gene 3824702 3825268 . - . ID=gene:Rv3405c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3405c;logic_name=ena +Chromosome ena gene 3824702 3825268 . - . ID=gene:Rv3405c;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3405c;logic_name=ena Chromosome ena mRNA 3824702 3825268 . - . ID=transcript:Rv3405c;Parent=gene:Rv3405c;biotype=protein_coding;transcript_id=Rv3405c Chromosome ena exon 3824702 3825268 . - . Parent=transcript:Rv3405c;Name=Rv3405c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3405c-1;rank=1 Chromosome ena CDS 3824702 3825268 . - 0 ID=CDS:Rv3405c;Parent=transcript:Rv3405c;protein_id=Rv3405c ### -Chromosome ena gene 3825330 3826217 . + . ID=gene:Rv3406;biotype=protein_coding;description=Probable dioxygenase;gene_id=Rv3406;logic_name=ena +Chromosome ena gene 3825330 3826217 . + . ID=gene:Rv3406;biotype=protein_coding;description=Probable dioxygenase;gene_id=Rv3406;logic_name=ena Chromosome ena mRNA 3825330 3826217 . + . ID=transcript:Rv3406;Parent=gene:Rv3406;biotype=protein_coding;transcript_id=Rv3406 Chromosome ena exon 3825330 3826217 . + . Parent=transcript:Rv3406;Name=Rv3406-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3406-1;rank=1 Chromosome ena CDS 3825330 3826217 . + 0 ID=CDS:Rv3406;Parent=transcript:Rv3406;protein_id=Rv3406 ### -Chromosome ena gene 3826252 3826551 . + . ID=gene:Rv3407;Name=vapB47;biotype=protein_coding;description=Possible antitoxin VapB47;gene_id=Rv3407;logic_name=ena +Chromosome ena gene 3826252 3826551 . + . ID=gene:Rv3407;Name=vapB47;biotype=protein_coding;description=Possible antitoxin VapB47;gene_id=Rv3407;logic_name=ena Chromosome ena mRNA 3826252 3826551 . + . ID=transcript:Rv3407;Parent=gene:Rv3407;Name=vapB47-1;biotype=protein_coding;transcript_id=Rv3407 Chromosome ena exon 3826252 3826551 . + . Parent=transcript:Rv3407;Name=Rv3407-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3407-1;rank=1 Chromosome ena CDS 3826252 3826551 . + 0 ID=CDS:Rv3407;Parent=transcript:Rv3407;protein_id=Rv3407 ### -Chromosome ena gene 3826548 3826958 . + . ID=gene:Rv3408;Name=vapC47;biotype=protein_coding;description=Possible toxin VapC47. Contains PIN domain.;gene_id=Rv3408;logic_name=ena +Chromosome ena gene 3826548 3826958 . + . ID=gene:Rv3408;Name=vapC47;biotype=protein_coding;description=Possible toxin VapC47. Contains PIN domain.;gene_id=Rv3408;logic_name=ena Chromosome ena mRNA 3826548 3826958 . + . ID=transcript:Rv3408;Parent=gene:Rv3408;Name=vapC47-1;biotype=protein_coding;transcript_id=Rv3408 Chromosome ena exon 3826548 3826958 . + . Parent=transcript:Rv3408;Name=Rv3408-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3408-1;rank=1 Chromosome ena CDS 3826548 3826958 . + 0 ID=CDS:Rv3408;Parent=transcript:Rv3408;protein_id=Rv3408 ### -Chromosome ena gene 3826991 3828727 . - . ID=gene:Rv3409c;Name=choD;biotype=protein_coding;description=Cholesterol oxidase ChoD (cholesterol-O2 oxidoreductase);gene_id=Rv3409c;logic_name=ena +Chromosome ena gene 3826991 3828727 . - . ID=gene:Rv3409c;Name=choD;biotype=protein_coding;description=Cholesterol oxidase ChoD (cholesterol-O2 oxidoreductase);gene_id=Rv3409c;logic_name=ena Chromosome ena mRNA 3826991 3828727 . - . ID=transcript:Rv3409c;Parent=gene:Rv3409c;Name=choD-1;biotype=protein_coding;transcript_id=Rv3409c Chromosome ena exon 3826991 3828727 . - . Parent=transcript:Rv3409c;Name=Rv3409c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3409c-1;rank=1 Chromosome ena CDS 3826991 3828727 . - 0 ID=CDS:Rv3409c;Parent=transcript:Rv3409c;protein_id=Rv3409c ### -Chromosome ena gene 3828783 3829910 . - . ID=gene:Rv3410c;Name=guaB3;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB3 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase) (imp oxidoreductase) (inosine-5'-monophosphate oxidoreductase) (IMPDH) (IMPD);gene_id=Rv3410c;logic_name=ena +Chromosome ena gene 3828783 3829910 . - . ID=gene:Rv3410c;Name=guaB3;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB3 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase) (imp oxidoreductase) (inosine-5'-monophosphate oxidoreductase) (IMPDH) (IMPD);gene_id=Rv3410c;logic_name=ena Chromosome ena mRNA 3828783 3829910 . - . ID=transcript:Rv3410c;Parent=gene:Rv3410c;Name=guaB3-1;biotype=protein_coding;transcript_id=Rv3410c Chromosome ena exon 3828783 3829910 . - . Parent=transcript:Rv3410c;Name=Rv3410c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3410c-1;rank=1 Chromosome ena CDS 3828783 3829910 . - 0 ID=CDS:Rv3410c;Parent=transcript:Rv3410c;protein_id=Rv3410c ### -Chromosome ena gene 3829930 3831519 . - . ID=gene:Rv3411c;Name=guaB2;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB2 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase) (imp oxidoreductase) (inosine-5'-monophosphate oxidoreductase) (IMPDH) (IMPD);gene_id=Rv3411c;logic_name=ena +Chromosome ena gene 3829930 3831519 . - . ID=gene:Rv3411c;Name=guaB2;biotype=protein_coding;description=Probable inosine-5'-monophosphate dehydrogenase GuaB2 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase) (imp oxidoreductase) (inosine-5'-monophosphate oxidoreductase) (IMPDH) (IMPD);gene_id=Rv3411c;logic_name=ena Chromosome ena mRNA 3829930 3831519 . - . ID=transcript:Rv3411c;Parent=gene:Rv3411c;Name=guaB2-1;biotype=protein_coding;transcript_id=Rv3411c Chromosome ena exon 3829930 3831519 . - . Parent=transcript:Rv3411c;Name=Rv3411c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3411c-1;rank=1 Chromosome ena CDS 3829930 3831519 . - 0 ID=CDS:Rv3411c;Parent=transcript:Rv3411c;protein_id=Rv3411c ### -Chromosome ena gene 3831726 3832136 . + . ID=gene:Rv3412;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3412;logic_name=ena +Chromosome ena gene 3831726 3832136 . + . ID=gene:Rv3412;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3412;logic_name=ena Chromosome ena mRNA 3831726 3832136 . + . ID=transcript:Rv3412;Parent=gene:Rv3412;biotype=protein_coding;transcript_id=Rv3412 Chromosome ena exon 3831726 3832136 . + . Parent=transcript:Rv3412;Name=Rv3412-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3412-1;rank=1 Chromosome ena CDS 3831726 3832136 . + 0 ID=CDS:Rv3412;Parent=transcript:Rv3412;protein_id=Rv3412 ### -Chromosome ena gene 3832146 3833045 . - . ID=gene:Rv3413c;biotype=protein_coding;description=Unknown alanine and proline rich protein;gene_id=Rv3413c;logic_name=ena +Chromosome ena gene 3832146 3833045 . - . ID=gene:Rv3413c;biotype=protein_coding;description=Unknown alanine and proline rich protein;gene_id=Rv3413c;logic_name=ena Chromosome ena mRNA 3832146 3833045 . - . ID=transcript:Rv3413c;Parent=gene:Rv3413c;biotype=protein_coding;transcript_id=Rv3413c Chromosome ena exon 3832146 3833045 . - . Parent=transcript:Rv3413c;Name=Rv3413c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3413c-1;rank=1 Chromosome ena CDS 3832146 3833045 . - 0 ID=CDS:Rv3413c;Parent=transcript:Rv3413c;protein_id=Rv3413c ### -Chromosome ena gene 3833038 3833676 . - . ID=gene:Rv3414c;Name=sigD;biotype=protein_coding;description=Probable alternative RNA polymerase sigma-D factor SigD;gene_id=Rv3414c;logic_name=ena +Chromosome ena gene 3833038 3833676 . - . ID=gene:Rv3414c;Name=sigD;biotype=protein_coding;description=Probable alternative RNA polymerase sigma-D factor SigD;gene_id=Rv3414c;logic_name=ena Chromosome ena mRNA 3833038 3833676 . - . ID=transcript:Rv3414c;Parent=gene:Rv3414c;Name=sigD-1;biotype=protein_coding;transcript_id=Rv3414c Chromosome ena exon 3833038 3833676 . - . Parent=transcript:Rv3414c;Name=Rv3414c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3414c-1;rank=1 Chromosome ena CDS 3833038 3833676 . - 0 ID=CDS:Rv3414c;Parent=transcript:Rv3414c;protein_id=Rv3414c ### -Chromosome ena gene 3833694 3834521 . - . ID=gene:Rv3415c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3415c;logic_name=ena +Chromosome ena gene 3833694 3834521 . - . ID=gene:Rv3415c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3415c;logic_name=ena Chromosome ena mRNA 3833694 3834521 . - . ID=transcript:Rv3415c;Parent=gene:Rv3415c;biotype=protein_coding;transcript_id=Rv3415c Chromosome ena exon 3833694 3834521 . - . Parent=transcript:Rv3415c;Name=Rv3415c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3415c-1;rank=1 Chromosome ena CDS 3833694 3834521 . - 0 ID=CDS:Rv3415c;Parent=transcript:Rv3415c;protein_id=Rv3415c ### -Chromosome ena gene 3834892 3835200 . + . ID=gene:Rv3416;Name=whiB3;biotype=protein_coding;description=Transcriptional regulatory protein WhiB-like WhiB3. Contains [4FE-4S] cluster.;gene_id=Rv3416;logic_name=ena +Chromosome ena gene 3834892 3835200 . + . ID=gene:Rv3416;Name=whiB3;biotype=protein_coding;description=Transcriptional regulatory protein WhiB-like WhiB3. Contains [4FE-4S] cluster.;gene_id=Rv3416;logic_name=ena Chromosome ena mRNA 3834892 3835200 . + . ID=transcript:Rv3416;Parent=gene:Rv3416;Name=whiB3-1;biotype=protein_coding;transcript_id=Rv3416 Chromosome ena exon 3834892 3835200 . + . Parent=transcript:Rv3416;Name=Rv3416-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3416-1;rank=1 Chromosome ena CDS 3834892 3835200 . + 0 ID=CDS:Rv3416;Parent=transcript:Rv3416;protein_id=Rv3416 ### -Chromosome ena gene 3835272 3836891 . - . ID=gene:Rv3417c;Name=groEL1;biotype=protein_coding;description=60 kDa chaperonin 1 GroEL1 (protein CPN60-1) (GroEL protein 1);gene_id=Rv3417c;logic_name=ena +Chromosome ena gene 3835272 3836891 . - . ID=gene:Rv3417c;Name=groEL1;biotype=protein_coding;description=60 kDa chaperonin 1 GroEL1 (protein CPN60-1) (GroEL protein 1);gene_id=Rv3417c;logic_name=ena Chromosome ena mRNA 3835272 3836891 . - . ID=transcript:Rv3417c;Parent=gene:Rv3417c;Name=groEL1-1;biotype=protein_coding;transcript_id=Rv3417c Chromosome ena exon 3835272 3836891 . - . Parent=transcript:Rv3417c;Name=Rv3417c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3417c-1;rank=1 Chromosome ena CDS 3835272 3836891 . - 0 ID=CDS:Rv3417c;Parent=transcript:Rv3417c;protein_id=Rv3417c ### -Chromosome ena gene 3836986 3837288 . - . ID=gene:Rv3418c;Name=groES;biotype=protein_coding;description=10 kDa chaperonin GroES (protein CPN10) (protein GroES) (BCG-a heat shock protein) (10 kDa antigen);gene_id=Rv3418c;logic_name=ena +Chromosome ena gene 3836986 3837288 . - . ID=gene:Rv3418c;Name=groES;biotype=protein_coding;description=10 kDa chaperonin GroES (protein CPN10) (protein GroES) (BCG-a heat shock protein) (10 kDa antigen);gene_id=Rv3418c;logic_name=ena Chromosome ena mRNA 3836986 3837288 . - . ID=transcript:Rv3418c;Parent=gene:Rv3418c;Name=groES-1;biotype=protein_coding;transcript_id=Rv3418c Chromosome ena exon 3836986 3837288 . - . Parent=transcript:Rv3418c;Name=Rv3418c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3418c-1;rank=1 Chromosome ena CDS 3836986 3837288 . - 0 ID=CDS:Rv3418c;Parent=transcript:Rv3418c;protein_id=Rv3418c ### -Chromosome ena gene 3837555 3838589 . - . ID=gene:Rv3419c;Name=gcp;biotype=protein_coding;description=Probable O-sialoglycoprotein endopeptidase Gcp (glycoprotease);gene_id=Rv3419c;logic_name=ena +Chromosome ena gene 3837555 3838589 . - . ID=gene:Rv3419c;Name=gcp;biotype=protein_coding;description=Probable O-sialoglycoprotein endopeptidase Gcp (glycoprotease);gene_id=Rv3419c;logic_name=ena Chromosome ena mRNA 3837555 3838589 . - . ID=transcript:Rv3419c;Parent=gene:Rv3419c;Name=gcp-1;biotype=protein_coding;transcript_id=Rv3419c Chromosome ena exon 3837555 3838589 . - . Parent=transcript:Rv3419c;Name=Rv3419c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3419c-1;rank=1 Chromosome ena CDS 3837555 3838589 . - 0 ID=CDS:Rv3419c;Parent=transcript:Rv3419c;protein_id=Rv3419c ### -Chromosome ena gene 3838586 3839062 . - . ID=gene:Rv3420c;Name=rimI;biotype=protein_coding;description=Ribosomal-protein-alanine acetyltransferase RimI (acetylating enzyme for N-terminal of ribosomal protein S18);gene_id=Rv3420c;logic_name=ena +Chromosome ena gene 3838586 3839062 . - . ID=gene:Rv3420c;Name=rimI;biotype=protein_coding;description=Ribosomal-protein-alanine acetyltransferase RimI (acetylating enzyme for N-terminal of ribosomal protein S18);gene_id=Rv3420c;logic_name=ena Chromosome ena mRNA 3838586 3839062 . - . ID=transcript:Rv3420c;Parent=gene:Rv3420c;Name=rimI-1;biotype=protein_coding;transcript_id=Rv3420c Chromosome ena exon 3838586 3839062 . - . Parent=transcript:Rv3420c;Name=Rv3420c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3420c-1;rank=1 Chromosome ena CDS 3838586 3839062 . - 0 ID=CDS:Rv3420c;Parent=transcript:Rv3420c;protein_id=Rv3420c ### -Chromosome ena gene 3839059 3839694 . - . ID=gene:Rv3421c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3421c;logic_name=ena +Chromosome ena gene 3839059 3839694 . - . ID=gene:Rv3421c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3421c;logic_name=ena Chromosome ena mRNA 3839059 3839694 . - . ID=transcript:Rv3421c;Parent=gene:Rv3421c;biotype=protein_coding;transcript_id=Rv3421c Chromosome ena exon 3839059 3839694 . - . Parent=transcript:Rv3421c;Name=Rv3421c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3421c-1;rank=1 Chromosome ena CDS 3839059 3839694 . - 0 ID=CDS:Rv3421c;Parent=transcript:Rv3421c;protein_id=Rv3421c ### -Chromosome ena gene 3839691 3840197 . - . ID=gene:Rv3422c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3422c;logic_name=ena +Chromosome ena gene 3839691 3840197 . - . ID=gene:Rv3422c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3422c;logic_name=ena Chromosome ena mRNA 3839691 3840197 . - . ID=transcript:Rv3422c;Parent=gene:Rv3422c;biotype=protein_coding;transcript_id=Rv3422c Chromosome ena exon 3839691 3840197 . - . Parent=transcript:Rv3422c;Name=Rv3422c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3422c-1;rank=1 Chromosome ena CDS 3839691 3840197 . - 0 ID=CDS:Rv3422c;Parent=transcript:Rv3422c;protein_id=Rv3422c ### -Chromosome ena gene 3840194 3841420 . - . ID=gene:Rv3423c;Name=alr;biotype=protein_coding;description=Alanine racemase Alr;gene_id=Rv3423c;logic_name=ena +Chromosome ena gene 3840194 3841420 . - . ID=gene:Rv3423c;Name=alr;biotype=protein_coding;description=Alanine racemase Alr;gene_id=Rv3423c;logic_name=ena Chromosome ena mRNA 3840194 3841420 . - . ID=transcript:Rv3423c;Parent=gene:Rv3423c;Name=alr-1;biotype=protein_coding;transcript_id=Rv3423c Chromosome ena exon 3840194 3841420 . - . Parent=transcript:Rv3423c;Name=Rv3423c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3423c-1;rank=1 Chromosome ena CDS 3840194 3841420 . - 0 ID=CDS:Rv3423c;Parent=transcript:Rv3423c;protein_id=Rv3423c ### -Chromosome ena gene 3841714 3842076 . - . ID=gene:Rv3424c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3424c;logic_name=ena +Chromosome ena gene 3841714 3842076 . - . ID=gene:Rv3424c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3424c;logic_name=ena Chromosome ena mRNA 3841714 3842076 . - . ID=transcript:Rv3424c;Parent=gene:Rv3424c;biotype=protein_coding;transcript_id=Rv3424c Chromosome ena exon 3841714 3842076 . - . Parent=transcript:Rv3424c;Name=Rv3424c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3424c-1;rank=1 Chromosome ena CDS 3841714 3842076 . - 0 ID=CDS:Rv3424c;Parent=transcript:Rv3424c;protein_id=Rv3424c ### -Chromosome ena gene 3842239 3842769 . + . ID=gene:Rv3425;Name=PPE57;biotype=protein_coding;description=PPE family protein PPE57;gene_id=Rv3425;logic_name=ena +Chromosome ena gene 3842239 3842769 . + . ID=gene:Rv3425;Name=PPE57;biotype=protein_coding;description=PPE family protein PPE57;gene_id=Rv3425;logic_name=ena Chromosome ena mRNA 3842239 3842769 . + . ID=transcript:Rv3425;Parent=gene:Rv3425;Name=PPE57-1;biotype=protein_coding;transcript_id=Rv3425 Chromosome ena exon 3842239 3842769 . + . Parent=transcript:Rv3425;Name=Rv3425-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3425-1;rank=1 Chromosome ena CDS 3842239 3842769 . + 0 ID=CDS:Rv3425;Parent=transcript:Rv3425;protein_id=Rv3425 ### -Chromosome ena gene 3843036 3843734 . + . ID=gene:Rv3426;Name=PPE58;biotype=protein_coding;description=PPE family protein PPE58;gene_id=Rv3426;logic_name=ena +Chromosome ena gene 3843036 3843734 . + . ID=gene:Rv3426;Name=PPE58;biotype=protein_coding;description=PPE family protein PPE58;gene_id=Rv3426;logic_name=ena Chromosome ena mRNA 3843036 3843734 . + . ID=transcript:Rv3426;Parent=gene:Rv3426;Name=PPE58-1;biotype=protein_coding;transcript_id=Rv3426 Chromosome ena exon 3843036 3843734 . + . Parent=transcript:Rv3426;Name=Rv3426-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3426-1;rank=1 Chromosome ena CDS 3843036 3843734 . + 0 ID=CDS:Rv3426;Parent=transcript:Rv3426;protein_id=Rv3426 ### -Chromosome ena gene 3843885 3844640 . - . ID=gene:Rv3427c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3427c;logic_name=ena +Chromosome ena gene 3843885 3844640 . - . ID=gene:Rv3427c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3427c;logic_name=ena Chromosome ena mRNA 3843885 3844640 . - . ID=transcript:Rv3427c;Parent=gene:Rv3427c;biotype=protein_coding;transcript_id=Rv3427c Chromosome ena exon 3843885 3844640 . - . Parent=transcript:Rv3427c;Name=Rv3427c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3427c-1;rank=1 Chromosome ena CDS 3843885 3844640 . - 0 ID=CDS:Rv3427c;Parent=transcript:Rv3427c;protein_id=Rv3427c ### -Chromosome ena_mobile_element biological_region 3843888 3845970 . - . external_name=IS1532%2C len: 2083 nt. Insertion sequence IS1532.;logic_name=ena_mobile_element -Chromosome ena gene 3844738 3845970 . - . ID=gene:Rv3428c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3428c;logic_name=ena +Chromosome ena_mobile_element biological_region 3843888 3845970 . - . external_name=IS1532%2C len: 2083 nt. Insertion sequence IS1532.;logic_name=ena_mobile_element +Chromosome ena gene 3844738 3845970 . - . ID=gene:Rv3428c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3428c;logic_name=ena Chromosome ena mRNA 3844738 3845970 . - . ID=transcript:Rv3428c;Parent=gene:Rv3428c;biotype=protein_coding;transcript_id=Rv3428c Chromosome ena exon 3844738 3845970 . - . Parent=transcript:Rv3428c;Name=Rv3428c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3428c-1;rank=1 Chromosome ena CDS 3844738 3845970 . - 0 ID=CDS:Rv3428c;Parent=transcript:Rv3428c;protein_id=Rv3428c ### -Chromosome ena gene 3847165 3847701 . + . ID=gene:Rv3429;Name=PPE59;biotype=protein_coding;description=PPE family protein PPE59;gene_id=Rv3429;logic_name=ena +Chromosome ena gene 3847165 3847701 . + . ID=gene:Rv3429;Name=PPE59;biotype=protein_coding;description=PPE family protein PPE59;gene_id=Rv3429;logic_name=ena Chromosome ena mRNA 3847165 3847701 . + . ID=transcript:Rv3429;Parent=gene:Rv3429;Name=PPE59-1;biotype=protein_coding;transcript_id=Rv3429 Chromosome ena exon 3847165 3847701 . + . Parent=transcript:Rv3429;Name=Rv3429-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3429-1;rank=1 Chromosome ena CDS 3847165 3847701 . + 0 ID=CDS:Rv3429;Parent=transcript:Rv3429;protein_id=Rv3429 ### -Chromosome ena gene 3847642 3848805 . - . ID=gene:Rv3430c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3430c;logic_name=ena +Chromosome ena gene 3847642 3848805 . - . ID=gene:Rv3430c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3430c;logic_name=ena Chromosome ena mRNA 3847642 3848805 . - . ID=transcript:Rv3430c;Parent=gene:Rv3430c;biotype=protein_coding;transcript_id=Rv3430c Chromosome ena exon 3847642 3848805 . - . Parent=transcript:Rv3430c;Name=Rv3430c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3430c-1;rank=1 Chromosome ena CDS 3847642 3848805 . - 0 ID=CDS:Rv3430c;Parent=transcript:Rv3430c;protein_id=Rv3430c ### -Chromosome ena_mobile_element biological_region 3847644 3848806 . - . external_name=IS1540%2C len: 1163 nt. Insertion sequence IS1540.;logic_name=ena_mobile_element -Chromosome ena gene 3849294 3850139 . - . ID=gene:Rv3431c;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv3431c;logic_name=ena +Chromosome ena_mobile_element biological_region 3847644 3848806 . - . external_name=IS1540%2C len: 1163 nt. Insertion sequence IS1540.;logic_name=ena_mobile_element +Chromosome ena gene 3849294 3850139 . - . ID=gene:Rv3431c;biotype=protein_coding;description=Possible transposase (fragment);gene_id=Rv3431c;logic_name=ena Chromosome ena mRNA 3849294 3850139 . - . ID=transcript:Rv3431c;Parent=gene:Rv3431c;biotype=protein_coding;transcript_id=Rv3431c Chromosome ena exon 3849294 3850139 . - . Parent=transcript:Rv3431c;Name=Rv3431c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3431c-1;rank=1 Chromosome ena CDS 3849294 3850139 . - 0 ID=CDS:Rv3431c;Parent=transcript:Rv3431c;protein_id=Rv3431c ### -Chromosome ena_mobile_element biological_region 3849296 3850140 . - . external_name=IS1552%2C len: 845 nt. Insertion sequence IS1552.;logic_name=ena_mobile_element -Chromosome ena gene 3850372 3851754 . - . ID=gene:Rv3432c;Name=gadB;biotype=protein_coding;description=Probable glutamate decarboxylase GadB;gene_id=Rv3432c;logic_name=ena +Chromosome ena_mobile_element biological_region 3849296 3850140 . - . external_name=IS1552%2C len: 845 nt. Insertion sequence IS1552.;logic_name=ena_mobile_element +Chromosome ena gene 3850372 3851754 . - . ID=gene:Rv3432c;Name=gadB;biotype=protein_coding;description=Probable glutamate decarboxylase GadB;gene_id=Rv3432c;logic_name=ena Chromosome ena mRNA 3850372 3851754 . - . ID=transcript:Rv3432c;Parent=gene:Rv3432c;Name=gadB-1;biotype=protein_coding;transcript_id=Rv3432c Chromosome ena exon 3850372 3851754 . - . Parent=transcript:Rv3432c;Name=Rv3432c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3432c-1;rank=1 Chromosome ena CDS 3850372 3851754 . - 0 ID=CDS:Rv3432c;Parent=transcript:Rv3432c;protein_id=Rv3432c ### -Chromosome ena gene 3851792 3853213 . - . ID=gene:Rv3433c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3433c;logic_name=ena +Chromosome ena gene 3851792 3853213 . - . ID=gene:Rv3433c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3433c;logic_name=ena Chromosome ena mRNA 3851792 3853213 . - . ID=transcript:Rv3433c;Parent=gene:Rv3433c;biotype=protein_coding;transcript_id=Rv3433c Chromosome ena exon 3851792 3853213 . - . Parent=transcript:Rv3433c;Name=Rv3433c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3433c-1;rank=1 Chromosome ena CDS 3851792 3853213 . - 0 ID=CDS:Rv3433c;Parent=transcript:Rv3433c;protein_id=Rv3433c ### -Chromosome ena gene 3853215 3853928 . - . ID=gene:Rv3434c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3434c;logic_name=ena +Chromosome ena gene 3853215 3853928 . - . ID=gene:Rv3434c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3434c;logic_name=ena Chromosome ena mRNA 3853215 3853928 . - . ID=transcript:Rv3434c;Parent=gene:Rv3434c;biotype=protein_coding;transcript_id=Rv3434c Chromosome ena exon 3853215 3853928 . - . Parent=transcript:Rv3434c;Name=Rv3434c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3434c-1;rank=1 Chromosome ena CDS 3853215 3853928 . - 0 ID=CDS:Rv3434c;Parent=transcript:Rv3434c;protein_id=Rv3434c ### -Chromosome ena gene 3853939 3854793 . - . ID=gene:Rv3435c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3435c;logic_name=ena +Chromosome ena gene 3853939 3854793 . - . ID=gene:Rv3435c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3435c;logic_name=ena Chromosome ena mRNA 3853939 3854793 . - . ID=transcript:Rv3435c;Parent=gene:Rv3435c;biotype=protein_coding;transcript_id=Rv3435c Chromosome ena exon 3853939 3854793 . - . Parent=transcript:Rv3435c;Name=Rv3435c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3435c-1;rank=1 Chromosome ena CDS 3853939 3854793 . - 0 ID=CDS:Rv3435c;Parent=transcript:Rv3435c;protein_id=Rv3435c ### -Chromosome ena gene 3855015 3856889 . - . ID=gene:Rv3436c;Name=glmS;biotype=protein_coding;description=Probable glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS (hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (glucosamine-6-phosphate synthase);gene_id=Rv3436c;logic_name=ena +Chromosome ena gene 3855015 3856889 . - . ID=gene:Rv3436c;Name=glmS;biotype=protein_coding;description=Probable glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS (hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (glucosamine-6-phosphate synthase);gene_id=Rv3436c;logic_name=ena Chromosome ena mRNA 3855015 3856889 . - . ID=transcript:Rv3436c;Parent=gene:Rv3436c;Name=glmS-1;biotype=protein_coding;transcript_id=Rv3436c Chromosome ena exon 3855015 3856889 . - . Parent=transcript:Rv3436c;Name=Rv3436c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3436c-1;rank=1 Chromosome ena CDS 3855015 3856889 . - 0 ID=CDS:Rv3436c;Parent=transcript:Rv3436c;protein_id=Rv3436c ### -Chromosome ena gene 3856911 3857387 . + . ID=gene:Rv3437;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3437;logic_name=ena +Chromosome ena gene 3856911 3857387 . + . ID=gene:Rv3437;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3437;logic_name=ena Chromosome ena mRNA 3856911 3857387 . + . ID=transcript:Rv3437;Parent=gene:Rv3437;biotype=protein_coding;transcript_id=Rv3437 Chromosome ena exon 3856911 3857387 . + . Parent=transcript:Rv3437;Name=Rv3437-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3437-1;rank=1 Chromosome ena CDS 3856911 3857387 . + 0 ID=CDS:Rv3437;Parent=transcript:Rv3437;protein_id=Rv3437 ### -Chromosome ena gene 3857397 3858239 . + . ID=gene:Rv3438;biotype=protein_coding;description=Conserved protein;gene_id=Rv3438;logic_name=ena +Chromosome ena gene 3857397 3858239 . + . ID=gene:Rv3438;biotype=protein_coding;description=Conserved protein;gene_id=Rv3438;logic_name=ena Chromosome ena mRNA 3857397 3858239 . + . ID=transcript:Rv3438;Parent=gene:Rv3438;biotype=protein_coding;transcript_id=Rv3438 Chromosome ena exon 3857397 3858239 . + . Parent=transcript:Rv3438;Name=Rv3438-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3438-1;rank=1 Chromosome ena CDS 3857397 3858239 . + 0 ID=CDS:Rv3438;Parent=transcript:Rv3438;protein_id=Rv3438 ### -Chromosome ena gene 3858259 3859662 . - . ID=gene:Rv3439c;biotype=protein_coding;description=Conserved hypothetical alanine and proline rich protein;gene_id=Rv3439c;logic_name=ena +Chromosome ena gene 3858259 3859662 . - . ID=gene:Rv3439c;biotype=protein_coding;description=Conserved hypothetical alanine and proline rich protein;gene_id=Rv3439c;logic_name=ena Chromosome ena mRNA 3858259 3859662 . - . ID=transcript:Rv3439c;Parent=gene:Rv3439c;biotype=protein_coding;transcript_id=Rv3439c Chromosome ena exon 3858259 3859662 . - . Parent=transcript:Rv3439c;Name=Rv3439c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3439c-1;rank=1 Chromosome ena CDS 3858259 3859662 . - 0 ID=CDS:Rv3439c;Parent=transcript:Rv3439c;protein_id=Rv3439c ### -Chromosome ena gene 3859665 3859976 . - . ID=gene:Rv3440c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3440c;logic_name=ena +Chromosome ena gene 3859665 3859976 . - . ID=gene:Rv3440c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3440c;logic_name=ena Chromosome ena mRNA 3859665 3859976 . - . ID=transcript:Rv3440c;Parent=gene:Rv3440c;biotype=protein_coding;transcript_id=Rv3440c Chromosome ena exon 3859665 3859976 . - . Parent=transcript:Rv3440c;Name=Rv3440c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3440c-1;rank=1 Chromosome ena CDS 3859665 3859976 . - 0 ID=CDS:Rv3440c;Parent=transcript:Rv3440c;protein_id=Rv3440c ### -Chromosome ena gene 3860024 3861370 . - . ID=gene:Rv3441c;Name=mrsA;biotype=protein_coding;description=Probable phospho-sugar mutase / MrsA protein homolog;gene_id=Rv3441c;logic_name=ena +Chromosome ena gene 3860024 3861370 . - . ID=gene:Rv3441c;Name=mrsA;biotype=protein_coding;description=Probable phospho-sugar mutase / MrsA protein homolog;gene_id=Rv3441c;logic_name=ena Chromosome ena mRNA 3860024 3861370 . - . ID=transcript:Rv3441c;Parent=gene:Rv3441c;Name=mrsA-1;biotype=protein_coding;transcript_id=Rv3441c Chromosome ena exon 3860024 3861370 . - . Parent=transcript:Rv3441c;Name=Rv3441c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3441c-1;rank=1 Chromosome ena CDS 3860024 3861370 . - 0 ID=CDS:Rv3441c;Parent=transcript:Rv3441c;protein_id=Rv3441c ### -Chromosome ena gene 3861495 3861950 . - . ID=gene:Rv3442c;Name=rpsI;biotype=protein_coding;description=30S ribosomal protein S9 RpsI;gene_id=Rv3442c;logic_name=ena +Chromosome ena gene 3861495 3861950 . - . ID=gene:Rv3442c;Name=rpsI;biotype=protein_coding;description=30S ribosomal protein S9 RpsI;gene_id=Rv3442c;logic_name=ena Chromosome ena mRNA 3861495 3861950 . - . ID=transcript:Rv3442c;Parent=gene:Rv3442c;Name=rpsI-1;biotype=protein_coding;transcript_id=Rv3442c Chromosome ena exon 3861495 3861950 . - . Parent=transcript:Rv3442c;Name=Rv3442c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3442c-1;rank=1 Chromosome ena CDS 3861495 3861950 . - 0 ID=CDS:Rv3442c;Parent=transcript:Rv3442c;protein_id=Rv3442c ### -Chromosome ena gene 3861947 3862390 . - . ID=gene:Rv3443c;Name=rplM;biotype=protein_coding;description=50S ribosomal protein L13 RplM;gene_id=Rv3443c;logic_name=ena +Chromosome ena gene 3861947 3862390 . - . ID=gene:Rv3443c;Name=rplM;biotype=protein_coding;description=50S ribosomal protein L13 RplM;gene_id=Rv3443c;logic_name=ena Chromosome ena mRNA 3861947 3862390 . - . ID=transcript:Rv3443c;Parent=gene:Rv3443c;Name=rplM-1;biotype=protein_coding;transcript_id=Rv3443c Chromosome ena exon 3861947 3862390 . - . Parent=transcript:Rv3443c;Name=Rv3443c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3443c-1;rank=1 Chromosome ena CDS 3861947 3862390 . - 0 ID=CDS:Rv3443c;Parent=transcript:Rv3443c;protein_id=Rv3443c ### -Chromosome ena gene 3862624 3862926 . - . ID=gene:Rv3444c;Name=esxT;biotype=protein_coding;description=Putative ESAT-6 like protein EsxT;gene_id=Rv3444c;logic_name=ena +Chromosome ena gene 3862624 3862926 . - . ID=gene:Rv3444c;Name=esxT;biotype=protein_coding;description=Putative ESAT-6 like protein EsxT;gene_id=Rv3444c;logic_name=ena Chromosome ena mRNA 3862624 3862926 . - . ID=transcript:Rv3444c;Parent=gene:Rv3444c;Name=esxT-1;biotype=protein_coding;transcript_id=Rv3444c Chromosome ena exon 3862624 3862926 . - . Parent=transcript:Rv3444c;Name=Rv3444c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3444c-1;rank=1 Chromosome ena CDS 3862624 3862926 . - 0 ID=CDS:Rv3444c;Parent=transcript:Rv3444c;protein_id=Rv3444c ### -Chromosome ena gene 3862947 3863264 . - . ID=gene:Rv3445c;Name=esxU;biotype=protein_coding;description=ESAT-6 like protein EsxU;gene_id=Rv3445c;logic_name=ena +Chromosome ena gene 3862947 3863264 . - . ID=gene:Rv3445c;Name=esxU;biotype=protein_coding;description=ESAT-6 like protein EsxU;gene_id=Rv3445c;logic_name=ena Chromosome ena mRNA 3862947 3863264 . - . ID=transcript:Rv3445c;Parent=gene:Rv3445c;Name=esxU-1;biotype=protein_coding;transcript_id=Rv3445c Chromosome ena exon 3862947 3863264 . - . Parent=transcript:Rv3445c;Name=Rv3445c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3445c-1;rank=1 Chromosome ena CDS 3862947 3863264 . - 0 ID=CDS:Rv3445c;Parent=transcript:Rv3445c;protein_id=Rv3445c ### -Chromosome ena gene 3863317 3864531 . - . ID=gene:Rv3446c;biotype=protein_coding;description=Hypothetical alanine and valine rich protein;gene_id=Rv3446c;logic_name=ena +Chromosome ena gene 3863317 3864531 . - . ID=gene:Rv3446c;biotype=protein_coding;description=Hypothetical alanine and valine rich protein;gene_id=Rv3446c;logic_name=ena Chromosome ena mRNA 3863317 3864531 . - . ID=transcript:Rv3446c;Parent=gene:Rv3446c;biotype=protein_coding;transcript_id=Rv3446c Chromosome ena exon 3863317 3864531 . - . Parent=transcript:Rv3446c;Name=Rv3446c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3446c-1;rank=1 Chromosome ena CDS 3863317 3864531 . - 0 ID=CDS:Rv3446c;Parent=transcript:Rv3446c;protein_id=Rv3446c ### -Chromosome ena gene 3864528 3868238 . - . ID=gene:Rv3447c;Name=eccC4;biotype=protein_coding;description=ESX conserved component EccC4. ESX-4 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3447c;logic_name=ena +Chromosome ena gene 3864528 3868238 . - . ID=gene:Rv3447c;Name=eccC4;biotype=protein_coding;description=ESX conserved component EccC4. ESX-4 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3447c;logic_name=ena Chromosome ena mRNA 3864528 3868238 . - . ID=transcript:Rv3447c;Parent=gene:Rv3447c;Name=eccC4-1;biotype=protein_coding;transcript_id=Rv3447c Chromosome ena exon 3864528 3868238 . - . Parent=transcript:Rv3447c;Name=Rv3447c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3447c-1;rank=1 Chromosome ena CDS 3864528 3868238 . - 0 ID=CDS:Rv3447c;Parent=transcript:Rv3447c;protein_id=Rv3447c ### -Chromosome ena gene 3868352 3869755 . + . ID=gene:Rv3448;Name=eccD4;biotype=protein_coding;description=ESX conserved component EccD4. ESX-4 type VII secretion system protein. Probable integral membrane protein.;gene_id=Rv3448;logic_name=ena +Chromosome ena gene 3868352 3869755 . + . ID=gene:Rv3448;Name=eccD4;biotype=protein_coding;description=ESX conserved component EccD4. ESX-4 type VII secretion system protein. Probable integral membrane protein.;gene_id=Rv3448;logic_name=ena Chromosome ena mRNA 3868352 3869755 . + . ID=transcript:Rv3448;Parent=gene:Rv3448;Name=eccD4-1;biotype=protein_coding;transcript_id=Rv3448 Chromosome ena exon 3868352 3869755 . + . Parent=transcript:Rv3448;Name=Rv3448-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3448-1;rank=1 Chromosome ena CDS 3868352 3869755 . + 0 ID=CDS:Rv3448;Parent=transcript:Rv3448;protein_id=Rv3448 ### -Chromosome ena gene 3869752 3871119 . + . ID=gene:Rv3449;Name=mycP4;biotype=protein_coding;description=Probable membrane-anchored mycosin MycP4 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-4);gene_id=Rv3449;logic_name=ena +Chromosome ena gene 3869752 3871119 . + . ID=gene:Rv3449;Name=mycP4;biotype=protein_coding;description=Probable membrane-anchored mycosin MycP4 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-4);gene_id=Rv3449;logic_name=ena Chromosome ena mRNA 3869752 3871119 . + . ID=transcript:Rv3449;Parent=gene:Rv3449;Name=mycP4-1;biotype=protein_coding;transcript_id=Rv3449 Chromosome ena exon 3869752 3871119 . + . Parent=transcript:Rv3449;Name=Rv3449-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3449-1;rank=1 Chromosome ena CDS 3869752 3871119 . + 0 ID=CDS:Rv3449;Parent=transcript:Rv3449;protein_id=Rv3449 ### -Chromosome ena gene 3871084 3872496 . - . ID=gene:Rv3450c;Name=eccB4;biotype=protein_coding;description=ESX conserved component EccB4. ESX-4 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3450c;logic_name=ena +Chromosome ena gene 3871084 3872496 . - . ID=gene:Rv3450c;Name=eccB4;biotype=protein_coding;description=ESX conserved component EccB4. ESX-4 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3450c;logic_name=ena Chromosome ena mRNA 3871084 3872496 . - . ID=transcript:Rv3450c;Parent=gene:Rv3450c;Name=eccB4-1;biotype=protein_coding;transcript_id=Rv3450c Chromosome ena exon 3871084 3872496 . - . Parent=transcript:Rv3450c;Name=Rv3450c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3450c-1;rank=1 Chromosome ena CDS 3871084 3872496 . - 0 ID=CDS:Rv3450c;Parent=transcript:Rv3450c;protein_id=Rv3450c ### -Chromosome ena gene 3872617 3873405 . + . ID=gene:Rv3451;Name=cut3;biotype=protein_coding;description=Probable cutinase precursor Cut3;gene_id=Rv3451;logic_name=ena +Chromosome ena gene 3872617 3873405 . + . ID=gene:Rv3451;Name=cut3;biotype=protein_coding;description=Probable cutinase precursor Cut3;gene_id=Rv3451;logic_name=ena Chromosome ena mRNA 3872617 3873405 . + . ID=transcript:Rv3451;Parent=gene:Rv3451;Name=cut3-1;biotype=protein_coding;transcript_id=Rv3451 Chromosome ena exon 3872617 3873405 . + . Parent=transcript:Rv3451;Name=Rv3451-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3451-1;rank=1 Chromosome ena CDS 3872617 3873405 . + 0 ID=CDS:Rv3451;Parent=transcript:Rv3451;protein_id=Rv3451 ### -Chromosome ena gene 3873452 3874132 . + . ID=gene:Rv3452;Name=cut4;biotype=protein_coding;description=Probable cutinase precursor Cut4;gene_id=Rv3452;logic_name=ena +Chromosome ena gene 3873452 3874132 . + . ID=gene:Rv3452;Name=cut4;biotype=protein_coding;description=Probable cutinase precursor Cut4;gene_id=Rv3452;logic_name=ena Chromosome ena mRNA 3873452 3874132 . + . ID=transcript:Rv3452;Parent=gene:Rv3452;Name=cut4-1;biotype=protein_coding;transcript_id=Rv3452 Chromosome ena exon 3873452 3874132 . + . Parent=transcript:Rv3452;Name=Rv3452-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3452-1;rank=1 Chromosome ena CDS 3873452 3874132 . + 0 ID=CDS:Rv3452;Parent=transcript:Rv3452;protein_id=Rv3452 ### -Chromosome ena gene 3874404 3874736 . + . ID=gene:Rv3453;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3453;logic_name=ena +Chromosome ena gene 3874404 3874736 . + . ID=gene:Rv3453;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3453;logic_name=ena Chromosome ena mRNA 3874404 3874736 . + . ID=transcript:Rv3453;Parent=gene:Rv3453;biotype=protein_coding;transcript_id=Rv3453 Chromosome ena exon 3874404 3874736 . + . Parent=transcript:Rv3453;Name=Rv3453-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3453-1;rank=1 Chromosome ena CDS 3874404 3874736 . + 0 ID=CDS:Rv3453;Parent=transcript:Rv3453;protein_id=Rv3453 ### -Chromosome ena gene 3874822 3876090 . + . ID=gene:Rv3454;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3454;logic_name=ena +Chromosome ena gene 3874822 3876090 . + . ID=gene:Rv3454;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3454;logic_name=ena Chromosome ena mRNA 3874822 3876090 . + . ID=transcript:Rv3454;Parent=gene:Rv3454;biotype=protein_coding;transcript_id=Rv3454 Chromosome ena exon 3874822 3876090 . + . Parent=transcript:Rv3454;Name=Rv3454-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3454-1;rank=1 Chromosome ena CDS 3874822 3876090 . + 0 ID=CDS:Rv3454;Parent=transcript:Rv3454;protein_id=Rv3454 ### -Chromosome ena gene 3876052 3876822 . - . ID=gene:Rv3455c;Name=truA;biotype=protein_coding;description=Probable tRNA pseudouridine synthase a TruA (pseudouridylate synthase I) (pseudouridine synthase I) (uracil hydrolyase);gene_id=Rv3455c;logic_name=ena +Chromosome ena gene 3876052 3876822 . - . ID=gene:Rv3455c;Name=truA;biotype=protein_coding;description=Probable tRNA pseudouridine synthase a TruA (pseudouridylate synthase I) (pseudouridine synthase I) (uracil hydrolyase);gene_id=Rv3455c;logic_name=ena Chromosome ena mRNA 3876052 3876822 . - . ID=transcript:Rv3455c;Parent=gene:Rv3455c;Name=truA-1;biotype=protein_coding;transcript_id=Rv3455c Chromosome ena exon 3876052 3876822 . - . Parent=transcript:Rv3455c;Name=Rv3455c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3455c-1;rank=1 Chromosome ena CDS 3876052 3876822 . - 0 ID=CDS:Rv3455c;Parent=transcript:Rv3455c;protein_id=Rv3455c ### -Chromosome ena gene 3876890 3877432 . - . ID=gene:Rv3456c;Name=rplQ;biotype=protein_coding;description=50S ribosomal protein L17 RplQ;gene_id=Rv3456c;logic_name=ena +Chromosome ena gene 3876890 3877432 . - . ID=gene:Rv3456c;Name=rplQ;biotype=protein_coding;description=50S ribosomal protein L17 RplQ;gene_id=Rv3456c;logic_name=ena Chromosome ena mRNA 3876890 3877432 . - . ID=transcript:Rv3456c;Parent=gene:Rv3456c;Name=rplQ-1;biotype=protein_coding;transcript_id=Rv3456c Chromosome ena exon 3876890 3877432 . - . Parent=transcript:Rv3456c;Name=Rv3456c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3456c-1;rank=1 Chromosome ena CDS 3876890 3877432 . - 0 ID=CDS:Rv3456c;Parent=transcript:Rv3456c;protein_id=Rv3456c ### -Chromosome ena gene 3877464 3878507 . - . ID=gene:Rv3457c;Name=rpoA;biotype=protein_coding;description=Probable DNA-directed RNA polymerase (alpha chain) RpoA (transcriptase alpha chain) (RNA polymerase alpha subunit) (DNA-directed RNA nucleotidyltransferase);gene_id=Rv3457c;logic_name=ena +Chromosome ena gene 3877464 3878507 . - . ID=gene:Rv3457c;Name=rpoA;biotype=protein_coding;description=Probable DNA-directed RNA polymerase (alpha chain) RpoA (transcriptase alpha chain) (RNA polymerase alpha subunit) (DNA-directed RNA nucleotidyltransferase);gene_id=Rv3457c;logic_name=ena Chromosome ena mRNA 3877464 3878507 . - . ID=transcript:Rv3457c;Parent=gene:Rv3457c;Name=rpoA-1;biotype=protein_coding;transcript_id=Rv3457c Chromosome ena exon 3877464 3878507 . - . Parent=transcript:Rv3457c;Name=Rv3457c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3457c-1;rank=1 Chromosome ena CDS 3877464 3878507 . - 0 ID=CDS:Rv3457c;Parent=transcript:Rv3457c;protein_id=Rv3457c ### -Chromosome ena gene 3878659 3879264 . - . ID=gene:Rv3458c;Name=rpsD;biotype=protein_coding;description=30S ribosomal protein S4 RpsD;gene_id=Rv3458c;logic_name=ena +Chromosome ena gene 3878659 3879264 . - . ID=gene:Rv3458c;Name=rpsD;biotype=protein_coding;description=30S ribosomal protein S4 RpsD;gene_id=Rv3458c;logic_name=ena Chromosome ena mRNA 3878659 3879264 . - . ID=transcript:Rv3458c;Parent=gene:Rv3458c;Name=rpsD-1;biotype=protein_coding;transcript_id=Rv3458c Chromosome ena exon 3878659 3879264 . - . Parent=transcript:Rv3458c;Name=Rv3458c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3458c-1;rank=1 Chromosome ena CDS 3878659 3879264 . - 0 ID=CDS:Rv3458c;Parent=transcript:Rv3458c;protein_id=Rv3458c ### -Chromosome ena gene 3879273 3879692 . - . ID=gene:Rv3459c;Name=rpsK;biotype=protein_coding;description=30S ribosomal protein S11 RpsK;gene_id=Rv3459c;logic_name=ena +Chromosome ena gene 3879273 3879692 . - . ID=gene:Rv3459c;Name=rpsK;biotype=protein_coding;description=30S ribosomal protein S11 RpsK;gene_id=Rv3459c;logic_name=ena Chromosome ena mRNA 3879273 3879692 . - . ID=transcript:Rv3459c;Parent=gene:Rv3459c;Name=rpsK-1;biotype=protein_coding;transcript_id=Rv3459c Chromosome ena exon 3879273 3879692 . - . Parent=transcript:Rv3459c;Name=Rv3459c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3459c-1;rank=1 Chromosome ena CDS 3879273 3879692 . - 0 ID=CDS:Rv3459c;Parent=transcript:Rv3459c;protein_id=Rv3459c ### -Chromosome ena gene 3879696 3880070 . - . ID=gene:Rv3460c;Name=rpsM;biotype=protein_coding;description=30S ribosomal protein S13 RpsM;gene_id=Rv3460c;logic_name=ena +Chromosome ena gene 3879696 3880070 . - . ID=gene:Rv3460c;Name=rpsM;biotype=protein_coding;description=30S ribosomal protein S13 RpsM;gene_id=Rv3460c;logic_name=ena Chromosome ena mRNA 3879696 3880070 . - . ID=transcript:Rv3460c;Parent=gene:Rv3460c;Name=rpsM-1;biotype=protein_coding;transcript_id=Rv3460c Chromosome ena exon 3879696 3880070 . - . Parent=transcript:Rv3460c;Name=Rv3460c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3460c-1;rank=1 Chromosome ena CDS 3879696 3880070 . - 0 ID=CDS:Rv3460c;Parent=transcript:Rv3460c;protein_id=Rv3460c ### -Chromosome ena gene 3880286 3880399 . - . ID=gene:Rv3461c;Name=rpmJ;biotype=protein_coding;description=50S ribosomal protein L36 RpmJ;gene_id=Rv3461c;logic_name=ena +Chromosome ena gene 3880286 3880399 . - . ID=gene:Rv3461c;Name=rpmJ;biotype=protein_coding;description=50S ribosomal protein L36 RpmJ;gene_id=Rv3461c;logic_name=ena Chromosome ena mRNA 3880286 3880399 . - . ID=transcript:Rv3461c;Parent=gene:Rv3461c;Name=rpmJ-1;biotype=protein_coding;transcript_id=Rv3461c Chromosome ena exon 3880286 3880399 . - . Parent=transcript:Rv3461c;Name=Rv3461c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3461c-1;rank=1 Chromosome ena CDS 3880286 3880399 . - 0 ID=CDS:Rv3461c;Parent=transcript:Rv3461c;protein_id=Rv3461c ### -Chromosome ena gene 3880432 3880653 . - . ID=gene:Rv3462c;Name=infA;biotype=protein_coding;description=Probable translation initiation factor if-1 InfA;gene_id=Rv3462c;logic_name=ena +Chromosome ena gene 3880432 3880653 . - . ID=gene:Rv3462c;Name=infA;biotype=protein_coding;description=Probable translation initiation factor if-1 InfA;gene_id=Rv3462c;logic_name=ena Chromosome ena mRNA 3880432 3880653 . - . ID=transcript:Rv3462c;Parent=gene:Rv3462c;Name=infA-1;biotype=protein_coding;transcript_id=Rv3462c Chromosome ena exon 3880432 3880653 . - . Parent=transcript:Rv3462c;Name=Rv3462c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3462c-1;rank=1 Chromosome ena CDS 3880432 3880653 . - 0 ID=CDS:Rv3462c;Parent=transcript:Rv3462c;protein_id=Rv3462c ### -Chromosome ena gene 3880907 3881764 . + . ID=gene:Rv3463;biotype=protein_coding;description=Conserved protein;gene_id=Rv3463;logic_name=ena +Chromosome ena gene 3880907 3881764 . + . ID=gene:Rv3463;biotype=protein_coding;description=Conserved protein;gene_id=Rv3463;logic_name=ena Chromosome ena mRNA 3880907 3881764 . + . ID=transcript:Rv3463;Parent=gene:Rv3463;biotype=protein_coding;transcript_id=Rv3463 Chromosome ena exon 3880907 3881764 . + . Parent=transcript:Rv3463;Name=Rv3463-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3463-1;rank=1 Chromosome ena CDS 3880907 3881764 . + 0 ID=CDS:Rv3463;Parent=transcript:Rv3463;protein_id=Rv3463 ### -Chromosome ena gene 3881837 3882832 . + . ID=gene:Rv3464;Name=rmlB;biotype=protein_coding;description=dTDP-glucose 4%2C6-dehydratase RmlB;gene_id=Rv3464;logic_name=ena +Chromosome ena gene 3881837 3882832 . + . ID=gene:Rv3464;Name=rmlB;biotype=protein_coding;description=dTDP-glucose 4%2C6-dehydratase RmlB;gene_id=Rv3464;logic_name=ena Chromosome ena mRNA 3881837 3882832 . + . ID=transcript:Rv3464;Parent=gene:Rv3464;Name=rmlB-1;biotype=protein_coding;transcript_id=Rv3464 Chromosome ena exon 3881837 3882832 . + . Parent=transcript:Rv3464;Name=Rv3464-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3464-1;rank=1 Chromosome ena CDS 3881837 3882832 . + 0 ID=CDS:Rv3464;Parent=transcript:Rv3464;protein_id=Rv3464 ### -Chromosome ena gene 3882834 3883442 . + . ID=gene:Rv3465;Name=rmlC;biotype=protein_coding;description=dTDP-4-dehydrorhamnose 3%2C5-epimerase RmlC (dTDP-4-keto-6-deoxyglucose 3%2C5-epimerase) (dTDP-L-rhamnose synthetase) (thymidine diphospho-4-keto-rhamnose 3%2C5-epimerase);gene_id=Rv3465;logic_name=ena +Chromosome ena gene 3882834 3883442 . + . ID=gene:Rv3465;Name=rmlC;biotype=protein_coding;description=dTDP-4-dehydrorhamnose 3%2C5-epimerase RmlC (dTDP-4-keto-6-deoxyglucose 3%2C5-epimerase) (dTDP-L-rhamnose synthetase) (thymidine diphospho-4-keto-rhamnose 3%2C5-epimerase);gene_id=Rv3465;logic_name=ena Chromosome ena mRNA 3882834 3883442 . + . ID=transcript:Rv3465;Parent=gene:Rv3465;Name=rmlC-1;biotype=protein_coding;transcript_id=Rv3465 Chromosome ena exon 3882834 3883442 . + . Parent=transcript:Rv3465;Name=Rv3465-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3465-1;rank=1 Chromosome ena CDS 3882834 3883442 . + 0 ID=CDS:Rv3465;Parent=transcript:Rv3465;protein_id=Rv3465 ### -Chromosome ena gene 3883525 3884193 . + . ID=gene:Rv3466;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3466;logic_name=ena +Chromosome ena gene 3883525 3884193 . + . ID=gene:Rv3466;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3466;logic_name=ena Chromosome ena mRNA 3883525 3884193 . + . ID=transcript:Rv3466;Parent=gene:Rv3466;biotype=protein_coding;transcript_id=Rv3466 Chromosome ena exon 3883525 3884193 . + . Parent=transcript:Rv3466;Name=Rv3466-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3466-1;rank=1 Chromosome ena CDS 3883525 3884193 . + 0 ID=CDS:Rv3466;Parent=transcript:Rv3466;protein_id=Rv3466 ### -Chromosome ena gene 3883964 3884917 . + . ID=gene:Rv3467;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3467;logic_name=ena +Chromosome ena gene 3883964 3884917 . + . ID=gene:Rv3467;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3467;logic_name=ena Chromosome ena mRNA 3883964 3884917 . + . ID=transcript:Rv3467;Parent=gene:Rv3467;biotype=protein_coding;transcript_id=Rv3467 Chromosome ena exon 3883964 3884917 . + . Parent=transcript:Rv3467;Name=Rv3467-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3467-1;rank=1 Chromosome ena CDS 3883964 3884917 . + 0 ID=CDS:Rv3467;Parent=transcript:Rv3467;protein_id=Rv3467 ### -Chromosome ena gene 3884975 3886069 . - . ID=gene:Rv3468c;biotype=protein_coding;description=Possible dTDP-glucose 4%2C6-dehydratase;gene_id=Rv3468c;logic_name=ena +Chromosome ena gene 3884975 3886069 . - . ID=gene:Rv3468c;biotype=protein_coding;description=Possible dTDP-glucose 4%2C6-dehydratase;gene_id=Rv3468c;logic_name=ena Chromosome ena mRNA 3884975 3886069 . - . ID=transcript:Rv3468c;Parent=gene:Rv3468c;biotype=protein_coding;transcript_id=Rv3468c Chromosome ena exon 3884975 3886069 . - . Parent=transcript:Rv3468c;Name=Rv3468c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3468c-1;rank=1 Chromosome ena CDS 3884975 3886069 . - 0 ID=CDS:Rv3468c;Parent=transcript:Rv3468c;protein_id=Rv3468c ### -Chromosome ena gene 3886073 3887083 . - . ID=gene:Rv3469c;Name=mhpE;biotype=protein_coding;description=Probable 4-hydroxy-2-oxovalerate aldolase MhpE (HOA);gene_id=Rv3469c;logic_name=ena +Chromosome ena gene 3886073 3887083 . - . ID=gene:Rv3469c;Name=mhpE;biotype=protein_coding;description=Probable 4-hydroxy-2-oxovalerate aldolase MhpE (HOA);gene_id=Rv3469c;logic_name=ena Chromosome ena mRNA 3886073 3887083 . - . ID=transcript:Rv3469c;Parent=gene:Rv3469c;Name=mhpE-1;biotype=protein_coding;transcript_id=Rv3469c Chromosome ena exon 3886073 3887083 . - . Parent=transcript:Rv3469c;Name=Rv3469c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3469c-1;rank=1 Chromosome ena CDS 3886073 3887083 . - 0 ID=CDS:Rv3469c;Parent=transcript:Rv3469c;protein_id=Rv3469c ### -Chromosome ena gene 3887144 3888802 . - . ID=gene:Rv3470c;Name=ilvB2;biotype=protein_coding;description=Probable acetolactate synthase (large subunit) IlvB2 (AHAS) (acetohydroxy-acid synthase large subunit) (ALS);gene_id=Rv3470c;logic_name=ena +Chromosome ena gene 3887144 3888802 . - . ID=gene:Rv3470c;Name=ilvB2;biotype=protein_coding;description=Probable acetolactate synthase (large subunit) IlvB2 (AHAS) (acetohydroxy-acid synthase large subunit) (ALS);gene_id=Rv3470c;logic_name=ena Chromosome ena mRNA 3887144 3888802 . - . ID=transcript:Rv3470c;Parent=gene:Rv3470c;Name=ilvB2-1;biotype=protein_coding;transcript_id=Rv3470c Chromosome ena exon 3887144 3888802 . - . Parent=transcript:Rv3470c;Name=Rv3470c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3470c-1;rank=1 Chromosome ena CDS 3887144 3888802 . - 0 ID=CDS:Rv3470c;Parent=transcript:Rv3470c;protein_id=Rv3470c ### -Chromosome ena gene 3888808 3889341 . - . ID=gene:Rv3471c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3471c;logic_name=ena +Chromosome ena gene 3888808 3889341 . - . ID=gene:Rv3471c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3471c;logic_name=ena Chromosome ena mRNA 3888808 3889341 . - . ID=transcript:Rv3471c;Parent=gene:Rv3471c;biotype=protein_coding;transcript_id=Rv3471c Chromosome ena exon 3888808 3889341 . - . Parent=transcript:Rv3471c;Name=Rv3471c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3471c-1;rank=1 Chromosome ena CDS 3888808 3889341 . - 0 ID=CDS:Rv3471c;Parent=transcript:Rv3471c;protein_id=Rv3471c ### -Chromosome ena gene 3889362 3889868 . + . ID=gene:Rv3472;biotype=protein_coding;description=Conserved protein;gene_id=Rv3472;logic_name=ena +Chromosome ena gene 3889362 3889868 . + . ID=gene:Rv3472;biotype=protein_coding;description=Conserved protein;gene_id=Rv3472;logic_name=ena Chromosome ena mRNA 3889362 3889868 . + . ID=transcript:Rv3472;Parent=gene:Rv3472;biotype=protein_coding;transcript_id=Rv3472 Chromosome ena exon 3889362 3889868 . + . Parent=transcript:Rv3472;Name=Rv3472-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3472-1;rank=1 Chromosome ena CDS 3889362 3889868 . + 0 ID=CDS:Rv3472;Parent=transcript:Rv3472;protein_id=Rv3472 ### -Chromosome ena gene 3889948 3890733 . - . ID=gene:Rv3473c;Name=bpoA;biotype=protein_coding;description=Possible peroxidase BpoA (non-haem peroxidase);gene_id=Rv3473c;logic_name=ena +Chromosome ena gene 3889948 3890733 . - . ID=gene:Rv3473c;Name=bpoA;biotype=protein_coding;description=Possible peroxidase BpoA (non-haem peroxidase);gene_id=Rv3473c;logic_name=ena Chromosome ena mRNA 3889948 3890733 . - . ID=transcript:Rv3473c;Parent=gene:Rv3473c;Name=bpoA-1;biotype=protein_coding;transcript_id=Rv3473c Chromosome ena exon 3889948 3890733 . - . Parent=transcript:Rv3473c;Name=Rv3473c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3473c-1;rank=1 Chromosome ena CDS 3889948 3890733 . - 0 ID=CDS:Rv3473c;Parent=transcript:Rv3473c;protein_id=Rv3473c ### -Chromosome ena_mobile_element biological_region 3890779 3892133 . + . external_name=IS6110-16%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element -Chromosome ena gene 3890830 3891156 . + . ID=gene:Rv3474;biotype=protein_coding;description=Possible transposase for insertion element IS6110 (fragment);gene_id=Rv3474;logic_name=ena +Chromosome ena_mobile_element biological_region 3890779 3892133 . + . external_name=IS6110-16%2C len: 1355 nt. Insertion sequence IS6110.;logic_name=ena_mobile_element +Chromosome ena gene 3890830 3891156 . + . ID=gene:Rv3474;biotype=protein_coding;description=Possible transposase for insertion element IS6110 (fragment);gene_id=Rv3474;logic_name=ena Chromosome ena mRNA 3890830 3891156 . + . ID=transcript:Rv3474;Parent=gene:Rv3474;biotype=protein_coding;transcript_id=Rv3474 Chromosome ena exon 3890830 3891156 . + . Parent=transcript:Rv3474;Name=Rv3474-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3474-1;rank=1 Chromosome ena CDS 3890830 3891156 . + 0 ID=CDS:Rv3474;Parent=transcript:Rv3474;protein_id=Rv3474 ### -Chromosome ena gene 3891105 3892091 . + . ID=gene:Rv3475;biotype=protein_coding;description=Possible transposase for insertion element IS6110 [second part];gene_id=Rv3475;logic_name=ena +Chromosome ena gene 3891105 3892091 . + . ID=gene:Rv3475;biotype=protein_coding;description=Possible transposase for insertion element IS6110 [second part];gene_id=Rv3475;logic_name=ena Chromosome ena mRNA 3891105 3892091 . + . ID=transcript:Rv3475;Parent=gene:Rv3475;biotype=protein_coding;transcript_id=Rv3475 Chromosome ena exon 3891105 3892091 . + . Parent=transcript:Rv3475;Name=Rv3475-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3475-1;rank=1 Chromosome ena CDS 3891105 3892091 . + 0 ID=CDS:Rv3475;Parent=transcript:Rv3475;protein_id=Rv3475 ### -Chromosome ena gene 3892371 3893720 . - . ID=gene:Rv3476c;Name=kgtP;biotype=protein_coding;description=Probable dicarboxylic acid transport integral membrane protein KgtP (dicarboxylate transporter);gene_id=Rv3476c;logic_name=ena +Chromosome ena gene 3892371 3893720 . - . ID=gene:Rv3476c;Name=kgtP;biotype=protein_coding;description=Probable dicarboxylic acid transport integral membrane protein KgtP (dicarboxylate transporter);gene_id=Rv3476c;logic_name=ena Chromosome ena mRNA 3892371 3893720 . - . ID=transcript:Rv3476c;Parent=gene:Rv3476c;Name=kgtP-1;biotype=protein_coding;transcript_id=Rv3476c Chromosome ena exon 3892371 3893720 . - . Parent=transcript:Rv3476c;Name=Rv3476c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3476c-1;rank=1 Chromosome ena CDS 3892371 3893720 . - 0 ID=CDS:Rv3476c;Parent=transcript:Rv3476c;protein_id=Rv3476c ### -Chromosome ena gene 3894093 3894389 . + . ID=gene:Rv3477;Name=PE31;biotype=protein_coding;description=PE family protein PE31;gene_id=Rv3477;logic_name=ena +Chromosome ena gene 3894093 3894389 . + . ID=gene:Rv3477;Name=PE31;biotype=protein_coding;description=PE family protein PE31;gene_id=Rv3477;logic_name=ena Chromosome ena mRNA 3894093 3894389 . + . ID=transcript:Rv3477;Parent=gene:Rv3477;Name=PE31-1;biotype=protein_coding;transcript_id=Rv3477 Chromosome ena exon 3894093 3894389 . + . Parent=transcript:Rv3477;Name=Rv3477-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3477-1;rank=1 Chromosome ena CDS 3894093 3894389 . + 0 ID=CDS:Rv3477;Parent=transcript:Rv3477;protein_id=Rv3477 ### -Chromosome ena gene 3894426 3895607 . + . ID=gene:Rv3478;Name=PPE60;biotype=protein_coding;description=PE family protein PPE60;gene_id=Rv3478;logic_name=ena +Chromosome ena gene 3894426 3895607 . + . ID=gene:Rv3478;Name=PPE60;biotype=protein_coding;description=PE family protein PPE60;gene_id=Rv3478;logic_name=ena Chromosome ena mRNA 3894426 3895607 . + . ID=transcript:Rv3478;Parent=gene:Rv3478;Name=PPE60-1;biotype=protein_coding;transcript_id=Rv3478 Chromosome ena exon 3894426 3895607 . + . Parent=transcript:Rv3478;Name=Rv3478-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3478-1;rank=1 Chromosome ena CDS 3894426 3895607 . + 0 ID=CDS:Rv3478;Parent=transcript:Rv3478;protein_id=Rv3478 ### -Chromosome ena gene 3895820 3898885 . + . ID=gene:Rv3479;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv3479;logic_name=ena +Chromosome ena gene 3895820 3898885 . + . ID=gene:Rv3479;biotype=protein_coding;description=Possible transmembrane protein;gene_id=Rv3479;logic_name=ena Chromosome ena mRNA 3895820 3898885 . + . ID=transcript:Rv3479;Parent=gene:Rv3479;biotype=protein_coding;transcript_id=Rv3479 Chromosome ena exon 3895820 3898885 . + . Parent=transcript:Rv3479;Name=Rv3479-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3479-1;rank=1 Chromosome ena CDS 3895820 3898885 . + 0 ID=CDS:Rv3479;Parent=transcript:Rv3479;protein_id=Rv3479 ### -Chromosome ena gene 3898909 3900402 . - . ID=gene:Rv3480c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3480c;logic_name=ena +Chromosome ena gene 3898909 3900402 . - . ID=gene:Rv3480c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3480c;logic_name=ena Chromosome ena mRNA 3898909 3900402 . - . ID=transcript:Rv3480c;Parent=gene:Rv3480c;biotype=protein_coding;transcript_id=Rv3480c Chromosome ena exon 3898909 3900402 . - . Parent=transcript:Rv3480c;Name=Rv3480c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3480c-1;rank=1 Chromosome ena CDS 3898909 3900402 . - 0 ID=CDS:Rv3480c;Parent=transcript:Rv3480c;protein_id=Rv3480c ### -Chromosome ena gene 3900493 3901182 . - . ID=gene:Rv3481c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv3481c;logic_name=ena +Chromosome ena gene 3900493 3901182 . - . ID=gene:Rv3481c;biotype=protein_coding;description=Probable integral membrane protein;gene_id=Rv3481c;logic_name=ena Chromosome ena mRNA 3900493 3901182 . - . ID=transcript:Rv3481c;Parent=gene:Rv3481c;biotype=protein_coding;transcript_id=Rv3481c Chromosome ena exon 3900493 3901182 . - . Parent=transcript:Rv3481c;Name=Rv3481c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3481c-1;rank=1 Chromosome ena CDS 3900493 3901182 . - 0 ID=CDS:Rv3481c;Parent=transcript:Rv3481c;protein_id=Rv3481c ### -Chromosome ena gene 3901324 3902106 . - . ID=gene:Rv3482c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3482c;logic_name=ena +Chromosome ena gene 3901324 3902106 . - . ID=gene:Rv3482c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3482c;logic_name=ena Chromosome ena mRNA 3901324 3902106 . - . ID=transcript:Rv3482c;Parent=gene:Rv3482c;biotype=protein_coding;transcript_id=Rv3482c Chromosome ena exon 3901324 3902106 . - . Parent=transcript:Rv3482c;Name=Rv3482c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3482c-1;rank=1 Chromosome ena CDS 3901324 3902106 . - 0 ID=CDS:Rv3482c;Parent=transcript:Rv3482c;protein_id=Rv3482c ### -Chromosome ena gene 3902150 3902812 . - . ID=gene:Rv3483c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv3483c;logic_name=ena +Chromosome ena gene 3902150 3902812 . - . ID=gene:Rv3483c;biotype=protein_coding;description=Possible exported protein;gene_id=Rv3483c;logic_name=ena Chromosome ena mRNA 3902150 3902812 . - . ID=transcript:Rv3483c;Parent=gene:Rv3483c;biotype=protein_coding;transcript_id=Rv3483c Chromosome ena exon 3902150 3902812 . - . Parent=transcript:Rv3483c;Name=Rv3483c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3483c-1;rank=1 Chromosome ena CDS 3902150 3902812 . - 0 ID=CDS:Rv3483c;Parent=transcript:Rv3483c;protein_id=Rv3483c ### -Chromosome ena gene 3903078 3904616 . + . ID=gene:Rv3484;Name=cpsA;biotype=protein_coding;description=Possible conserved protein CpsA;gene_id=Rv3484;logic_name=ena +Chromosome ena gene 3903078 3904616 . + . ID=gene:Rv3484;Name=cpsA;biotype=protein_coding;description=Possible conserved protein CpsA;gene_id=Rv3484;logic_name=ena Chromosome ena mRNA 3903078 3904616 . + . ID=transcript:Rv3484;Parent=gene:Rv3484;Name=cpsA-1;biotype=protein_coding;transcript_id=Rv3484 Chromosome ena exon 3903078 3904616 . + . Parent=transcript:Rv3484;Name=Rv3484-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3484-1;rank=1 Chromosome ena CDS 3903078 3904616 . + 0 ID=CDS:Rv3484;Parent=transcript:Rv3484;protein_id=Rv3484 ### -Chromosome ena gene 3904622 3905566 . - . ID=gene:Rv3485c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3485c;logic_name=ena +Chromosome ena gene 3904622 3905566 . - . ID=gene:Rv3485c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3485c;logic_name=ena Chromosome ena mRNA 3904622 3905566 . - . ID=transcript:Rv3485c;Parent=gene:Rv3485c;biotype=protein_coding;transcript_id=Rv3485c Chromosome ena exon 3904622 3905566 . - . Parent=transcript:Rv3485c;Name=Rv3485c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3485c-1;rank=1 Chromosome ena CDS 3904622 3905566 . - 0 ID=CDS:Rv3485c;Parent=transcript:Rv3485c;protein_id=Rv3485c ### -Chromosome ena gene 3905772 3906221 . + . ID=gene:Rv3486;biotype=protein_coding;description=Conserved protein;gene_id=Rv3486;logic_name=ena +Chromosome ena gene 3905772 3906221 . + . ID=gene:Rv3486;biotype=protein_coding;description=Conserved protein;gene_id=Rv3486;logic_name=ena Chromosome ena mRNA 3905772 3906221 . + . ID=transcript:Rv3486;Parent=gene:Rv3486;biotype=protein_coding;transcript_id=Rv3486 Chromosome ena exon 3905772 3906221 . + . Parent=transcript:Rv3486;Name=Rv3486-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3486-1;rank=1 Chromosome ena CDS 3905772 3906221 . + 0 ID=CDS:Rv3486;Parent=transcript:Rv3486;protein_id=Rv3486 ### -Chromosome ena gene 3906174 3907007 . - . ID=gene:Rv3487c;Name=lipF;biotype=protein_coding;description=Probable esterase/lipase LipF;gene_id=Rv3487c;logic_name=ena +Chromosome ena gene 3906174 3907007 . - . ID=gene:Rv3487c;Name=lipF;biotype=protein_coding;description=Probable esterase/lipase LipF;gene_id=Rv3487c;logic_name=ena Chromosome ena mRNA 3906174 3907007 . - . ID=transcript:Rv3487c;Parent=gene:Rv3487c;Name=lipF-1;biotype=protein_coding;transcript_id=Rv3487c Chromosome ena exon 3906174 3907007 . - . Parent=transcript:Rv3487c;Name=Rv3487c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3487c-1;rank=1 Chromosome ena CDS 3906174 3907007 . - 0 ID=CDS:Rv3487c;Parent=transcript:Rv3487c;protein_id=Rv3487c ### -Chromosome ena gene 3907667 3907990 . + . ID=gene:Rv3488;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3488;logic_name=ena +Chromosome ena gene 3907667 3907990 . + . ID=gene:Rv3488;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3488;logic_name=ena Chromosome ena mRNA 3907667 3907990 . + . ID=transcript:Rv3488;Parent=gene:Rv3488;biotype=protein_coding;transcript_id=Rv3488 Chromosome ena exon 3907667 3907990 . + . Parent=transcript:Rv3488;Name=Rv3488-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3488-1;rank=1 Chromosome ena CDS 3907667 3907990 . + 0 ID=CDS:Rv3488;Parent=transcript:Rv3488;protein_id=Rv3488 ### -Chromosome ena gene 3908072 3908236 . + . ID=gene:Rv3489;biotype=protein_coding;description=Unknown protein;gene_id=Rv3489;logic_name=ena +Chromosome ena gene 3908072 3908236 . + . ID=gene:Rv3489;biotype=protein_coding;description=Unknown protein;gene_id=Rv3489;logic_name=ena Chromosome ena mRNA 3908072 3908236 . + . ID=transcript:Rv3489;Parent=gene:Rv3489;biotype=protein_coding;transcript_id=Rv3489 Chromosome ena exon 3908072 3908236 . + . Parent=transcript:Rv3489;Name=Rv3489-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3489-1;rank=1 Chromosome ena CDS 3908072 3908236 . + 0 ID=CDS:Rv3489;Parent=transcript:Rv3489;protein_id=Rv3489 ### -Chromosome ena gene 3908236 3909738 . + . ID=gene:Rv3490;Name=otsA;biotype=protein_coding;description=Alpha%2C alpha-trehalose-phosphate synthase [UDP-forming] OtsA (trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) (trehalosephosphate-UDP glucosyltransferase) (trehalose-6-phosphate synthetase) (trehalose-phosphate synthase) (trehalose-phosphate synthetase) (transglucosylase) (trehalosephosphate-UDP glucosyl transferase);gene_id=Rv3490;logic_name=ena +Chromosome ena gene 3908236 3909738 . + . ID=gene:Rv3490;Name=otsA;biotype=protein_coding;description=Alpha%2C alpha-trehalose-phosphate synthase [UDP-forming] OtsA (trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) (trehalosephosphate-UDP glucosyltransferase) (trehalose-6-phosphate synthetase) (trehalose-phosphate synthase) (trehalose-phosphate synthetase) (transglucosylase) (trehalosephosphate-UDP glucosyl transferase);gene_id=Rv3490;logic_name=ena Chromosome ena mRNA 3908236 3909738 . + . ID=transcript:Rv3490;Parent=gene:Rv3490;Name=otsA-1;biotype=protein_coding;transcript_id=Rv3490 Chromosome ena exon 3908236 3909738 . + . Parent=transcript:Rv3490;Name=Rv3490-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3490-1;rank=1 Chromosome ena CDS 3908236 3909738 . + 0 ID=CDS:Rv3490;Parent=transcript:Rv3490;protein_id=Rv3490 ### -Chromosome ena gene 3909890 3910468 . + . ID=gene:Rv3491;biotype=protein_coding;description=Unknown protein;gene_id=Rv3491;logic_name=ena +Chromosome ena gene 3909890 3910468 . + . ID=gene:Rv3491;biotype=protein_coding;description=Unknown protein;gene_id=Rv3491;logic_name=ena Chromosome ena mRNA 3909890 3910468 . + . ID=transcript:Rv3491;Parent=gene:Rv3491;biotype=protein_coding;transcript_id=Rv3491 Chromosome ena exon 3909890 3910468 . + . Parent=transcript:Rv3491;Name=Rv3491-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3491-1;rank=1 Chromosome ena CDS 3909890 3910468 . + 0 ID=CDS:Rv3491;Parent=transcript:Rv3491;protein_id=Rv3491 ### -Chromosome ena gene 3910465 3910947 . - . ID=gene:Rv3492c;biotype=protein_coding;description=Conserved hypothetical Mce associated protein;gene_id=Rv3492c;logic_name=ena +Chromosome ena gene 3910465 3910947 . - . ID=gene:Rv3492c;biotype=protein_coding;description=Conserved hypothetical Mce associated protein;gene_id=Rv3492c;logic_name=ena Chromosome ena mRNA 3910465 3910947 . - . ID=transcript:Rv3492c;Parent=gene:Rv3492c;biotype=protein_coding;transcript_id=Rv3492c Chromosome ena exon 3910465 3910947 . - . Parent=transcript:Rv3492c;Name=Rv3492c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3492c-1;rank=1 Chromosome ena CDS 3910465 3910947 . - 0 ID=CDS:Rv3492c;Parent=transcript:Rv3492c;protein_id=Rv3492c ### -Chromosome ena gene 3910947 3911675 . - . ID=gene:Rv3493c;biotype=protein_coding;description=Conserved hypothetical Mce associated alanine and valine rich protein;gene_id=Rv3493c;logic_name=ena +Chromosome ena gene 3910947 3911675 . - . ID=gene:Rv3493c;biotype=protein_coding;description=Conserved hypothetical Mce associated alanine and valine rich protein;gene_id=Rv3493c;logic_name=ena Chromosome ena mRNA 3910947 3911675 . - . ID=transcript:Rv3493c;Parent=gene:Rv3493c;biotype=protein_coding;transcript_id=Rv3493c Chromosome ena exon 3910947 3911675 . - . Parent=transcript:Rv3493c;Name=Rv3493c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3493c-1;rank=1 Chromosome ena CDS 3910947 3911675 . - 0 ID=CDS:Rv3493c;Parent=transcript:Rv3493c;protein_id=Rv3493c ### -Chromosome ena gene 3911675 3913369 . - . ID=gene:Rv3494c;Name=mce4F;biotype=protein_coding;description=Mce-family protein Mce4F;gene_id=Rv3494c;logic_name=ena +Chromosome ena gene 3911675 3913369 . - . ID=gene:Rv3494c;Name=mce4F;biotype=protein_coding;description=Mce-family protein Mce4F;gene_id=Rv3494c;logic_name=ena Chromosome ena mRNA 3911675 3913369 . - . ID=transcript:Rv3494c;Parent=gene:Rv3494c;Name=mce4F-1;biotype=protein_coding;transcript_id=Rv3494c Chromosome ena exon 3911675 3913369 . - . Parent=transcript:Rv3494c;Name=Rv3494c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3494c-1;rank=1 Chromosome ena CDS 3911675 3913369 . - 0 ID=CDS:Rv3494c;Parent=transcript:Rv3494c;protein_id=Rv3494c ### -Chromosome ena gene 3913380 3914534 . - . ID=gene:Rv3495c;Name=lprN;biotype=protein_coding;description=Possible Mce-family lipoprotein LprN (Mce-family lipoprotein Mce4E);gene_id=Rv3495c;logic_name=ena +Chromosome ena gene 3913380 3914534 . - . ID=gene:Rv3495c;Name=lprN;biotype=protein_coding;description=Possible Mce-family lipoprotein LprN (Mce-family lipoprotein Mce4E);gene_id=Rv3495c;logic_name=ena Chromosome ena mRNA 3913380 3914534 . - . ID=transcript:Rv3495c;Parent=gene:Rv3495c;Name=lprN-1;biotype=protein_coding;transcript_id=Rv3495c Chromosome ena exon 3913380 3914534 . - . Parent=transcript:Rv3495c;Name=Rv3495c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3495c-1;rank=1 Chromosome ena CDS 3913380 3914534 . - 0 ID=CDS:Rv3495c;Parent=transcript:Rv3495c;protein_id=Rv3495c ### -Chromosome ena gene 3914531 3915886 . - . ID=gene:Rv3496c;Name=mce4D;biotype=protein_coding;description=Mce-family protein Mce4D;gene_id=Rv3496c;logic_name=ena +Chromosome ena gene 3914531 3915886 . - . ID=gene:Rv3496c;Name=mce4D;biotype=protein_coding;description=Mce-family protein Mce4D;gene_id=Rv3496c;logic_name=ena Chromosome ena mRNA 3914531 3915886 . - . ID=transcript:Rv3496c;Parent=gene:Rv3496c;Name=mce4D-1;biotype=protein_coding;transcript_id=Rv3496c Chromosome ena exon 3914531 3915886 . - . Parent=transcript:Rv3496c;Name=Rv3496c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3496c-1;rank=1 Chromosome ena CDS 3914531 3915886 . - 0 ID=CDS:Rv3496c;Parent=transcript:Rv3496c;protein_id=Rv3496c ### -Chromosome ena gene 3915883 3916956 . - . ID=gene:Rv3497c;Name=mce4C;biotype=protein_coding;description=Mce-family protein Mce4C;gene_id=Rv3497c;logic_name=ena +Chromosome ena gene 3915883 3916956 . - . ID=gene:Rv3497c;Name=mce4C;biotype=protein_coding;description=Mce-family protein Mce4C;gene_id=Rv3497c;logic_name=ena Chromosome ena mRNA 3915883 3916956 . - . ID=transcript:Rv3497c;Parent=gene:Rv3497c;Name=mce4C-1;biotype=protein_coding;transcript_id=Rv3497c Chromosome ena exon 3915883 3916956 . - . Parent=transcript:Rv3497c;Name=Rv3497c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3497c-1;rank=1 Chromosome ena CDS 3915883 3916956 . - 0 ID=CDS:Rv3497c;Parent=transcript:Rv3497c;protein_id=Rv3497c ### -Chromosome ena gene 3916946 3917998 . - . ID=gene:Rv3498c;Name=mce4B;biotype=protein_coding;description=Mce-family protein Mce4B;gene_id=Rv3498c;logic_name=ena +Chromosome ena gene 3916946 3917998 . - . ID=gene:Rv3498c;Name=mce4B;biotype=protein_coding;description=Mce-family protein Mce4B;gene_id=Rv3498c;logic_name=ena Chromosome ena mRNA 3916946 3917998 . - . ID=transcript:Rv3498c;Parent=gene:Rv3498c;Name=mce4B-1;biotype=protein_coding;transcript_id=Rv3498c Chromosome ena exon 3916946 3917998 . - . Parent=transcript:Rv3498c;Name=Rv3498c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3498c-1;rank=1 Chromosome ena CDS 3916946 3917998 . - 0 ID=CDS:Rv3498c;Parent=transcript:Rv3498c;protein_id=Rv3498c ### -Chromosome ena gene 3917998 3919200 . - . ID=gene:Rv3499c;Name=mce4A;biotype=protein_coding;description=Mce-family protein Mce4A;gene_id=Rv3499c;logic_name=ena +Chromosome ena gene 3917998 3919200 . - . ID=gene:Rv3499c;Name=mce4A;biotype=protein_coding;description=Mce-family protein Mce4A;gene_id=Rv3499c;logic_name=ena Chromosome ena mRNA 3917998 3919200 . - . ID=transcript:Rv3499c;Parent=gene:Rv3499c;Name=mce4A-1;biotype=protein_coding;transcript_id=Rv3499c Chromosome ena exon 3917998 3919200 . - . Parent=transcript:Rv3499c;Name=Rv3499c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3499c-1;rank=1 Chromosome ena CDS 3917998 3919200 . - 0 ID=CDS:Rv3499c;Parent=transcript:Rv3499c;protein_id=Rv3499c ### -Chromosome ena gene 3919220 3920062 . - . ID=gene:Rv3500c;Name=yrbE4B;biotype=protein_coding;description=Conserved integral membrane protein YrbE4B. Possible ABC transporter.;gene_id=Rv3500c;logic_name=ena +Chromosome ena gene 3919220 3920062 . - . ID=gene:Rv3500c;Name=yrbE4B;biotype=protein_coding;description=Conserved integral membrane protein YrbE4B. Possible ABC transporter.;gene_id=Rv3500c;logic_name=ena Chromosome ena mRNA 3919220 3920062 . - . ID=transcript:Rv3500c;Parent=gene:Rv3500c;Name=yrbE4B-1;biotype=protein_coding;transcript_id=Rv3500c Chromosome ena exon 3919220 3920062 . - . Parent=transcript:Rv3500c;Name=Rv3500c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3500c-1;rank=1 Chromosome ena CDS 3919220 3920062 . - 0 ID=CDS:Rv3500c;Parent=transcript:Rv3500c;protein_id=Rv3500c ### -Chromosome ena gene 3920097 3920861 . - . ID=gene:Rv3501c;Name=yrbE4A;biotype=protein_coding;description=Conserved integral membrane protein YrbE4A. Possible ABC transporter.;gene_id=Rv3501c;logic_name=ena +Chromosome ena gene 3920097 3920861 . - . ID=gene:Rv3501c;Name=yrbE4A;biotype=protein_coding;description=Conserved integral membrane protein YrbE4A. Possible ABC transporter.;gene_id=Rv3501c;logic_name=ena Chromosome ena mRNA 3920097 3920861 . - . ID=transcript:Rv3501c;Parent=gene:Rv3501c;Name=yrbE4A-1;biotype=protein_coding;transcript_id=Rv3501c Chromosome ena exon 3920097 3920861 . - . Parent=transcript:Rv3501c;Name=Rv3501c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3501c-1;rank=1 Chromosome ena CDS 3920097 3920861 . - 0 ID=CDS:Rv3501c;Parent=transcript:Rv3501c;protein_id=Rv3501c ### -Chromosome ena gene 3921087 3922040 . - . ID=gene:Rv3502c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase. Possible 17-beta-hydroxysteroid dehydrogenase.;gene_id=Rv3502c;logic_name=ena +Chromosome ena gene 3921087 3922040 . - . ID=gene:Rv3502c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase. Possible 17-beta-hydroxysteroid dehydrogenase.;gene_id=Rv3502c;logic_name=ena Chromosome ena mRNA 3921087 3922040 . - . ID=transcript:Rv3502c;Parent=gene:Rv3502c;biotype=protein_coding;transcript_id=Rv3502c Chromosome ena exon 3921087 3922040 . - . Parent=transcript:Rv3502c;Name=Rv3502c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3502c-1;rank=1 Chromosome ena CDS 3921087 3922040 . - 0 ID=CDS:Rv3502c;Parent=transcript:Rv3502c;protein_id=Rv3502c ### -Chromosome ena gene 3922065 3922256 . - . ID=gene:Rv3503c;Name=fdxD;biotype=protein_coding;description=Probable ferredoxin FdxD;gene_id=Rv3503c;logic_name=ena +Chromosome ena gene 3922065 3922256 . - . ID=gene:Rv3503c;Name=fdxD;biotype=protein_coding;description=Probable ferredoxin FdxD;gene_id=Rv3503c;logic_name=ena Chromosome ena mRNA 3922065 3922256 . - . ID=transcript:Rv3503c;Parent=gene:Rv3503c;Name=fdxD-1;biotype=protein_coding;transcript_id=Rv3503c Chromosome ena exon 3922065 3922256 . - . Parent=transcript:Rv3503c;Name=Rv3503c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3503c-1;rank=1 Chromosome ena CDS 3922065 3922256 . - 0 ID=CDS:Rv3503c;Parent=transcript:Rv3503c;protein_id=Rv3503c ### -Chromosome ena gene 3922471 3923673 . + . ID=gene:Rv3504;Name=fadE26;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE26;gene_id=Rv3504;logic_name=ena +Chromosome ena gene 3922471 3923673 . + . ID=gene:Rv3504;Name=fadE26;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE26;gene_id=Rv3504;logic_name=ena Chromosome ena mRNA 3922471 3923673 . + . ID=transcript:Rv3504;Parent=gene:Rv3504;Name=fadE26-1;biotype=protein_coding;transcript_id=Rv3504 Chromosome ena exon 3922471 3923673 . + . Parent=transcript:Rv3504;Name=Rv3504-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3504-1;rank=1 Chromosome ena CDS 3922471 3923673 . + 0 ID=CDS:Rv3504;Parent=transcript:Rv3504;protein_id=Rv3504 ### -Chromosome ena gene 3923698 3924819 . + . ID=gene:Rv3505;Name=fadE27;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE27;gene_id=Rv3505;logic_name=ena +Chromosome ena gene 3923698 3924819 . + . ID=gene:Rv3505;Name=fadE27;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE27;gene_id=Rv3505;logic_name=ena Chromosome ena mRNA 3923698 3924819 . + . ID=transcript:Rv3505;Parent=gene:Rv3505;Name=fadE27-1;biotype=protein_coding;transcript_id=Rv3505 Chromosome ena exon 3923698 3924819 . + . Parent=transcript:Rv3505;Name=Rv3505-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3505-1;rank=1 Chromosome ena CDS 3923698 3924819 . + 0 ID=CDS:Rv3505;Parent=transcript:Rv3505;protein_id=Rv3505 ### -Chromosome ena gene 3924890 3926398 . + . ID=gene:Rv3506;Name=fadD17;biotype=protein_coding;description=Fatty-acid-CoA synthetase FadD17 (fatty-acid-CoA synthase) (fatty-acid-CoA ligase);gene_id=Rv3506;logic_name=ena +Chromosome ena gene 3924890 3926398 . + . ID=gene:Rv3506;Name=fadD17;biotype=protein_coding;description=Fatty-acid-CoA synthetase FadD17 (fatty-acid-CoA synthase) (fatty-acid-CoA ligase);gene_id=Rv3506;logic_name=ena Chromosome ena mRNA 3924890 3926398 . + . ID=transcript:Rv3506;Parent=gene:Rv3506;Name=fadD17-1;biotype=protein_coding;transcript_id=Rv3506 Chromosome ena exon 3924890 3926398 . + . Parent=transcript:Rv3506;Name=Rv3506-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3506-1;rank=1 Chromosome ena CDS 3924890 3926398 . + 0 ID=CDS:Rv3506;Parent=transcript:Rv3506;protein_id=Rv3506 ### -Chromosome ena gene 3926569 3930714 . + . ID=gene:Rv3507;Name=PE_PGRS53;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS53;gene_id=Rv3507;logic_name=ena +Chromosome ena gene 3926569 3930714 . + . ID=gene:Rv3507;Name=PE_PGRS53;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS53;gene_id=Rv3507;logic_name=ena Chromosome ena mRNA 3926569 3930714 . + . ID=transcript:Rv3507;Parent=gene:Rv3507;Name=PE_PGRS53-1;biotype=protein_coding;transcript_id=Rv3507 Chromosome ena exon 3926569 3930714 . + . Parent=transcript:Rv3507;Name=Rv3507-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3507-1;rank=1 Chromosome ena CDS 3926569 3930714 . + 0 ID=CDS:Rv3507;Parent=transcript:Rv3507;protein_id=Rv3507 ### -Chromosome ena gene 3931005 3936710 . + . ID=gene:Rv3508;Name=PE_PGRS54;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS54;gene_id=Rv3508;logic_name=ena +Chromosome ena gene 3931005 3936710 . + . ID=gene:Rv3508;Name=PE_PGRS54;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS54;gene_id=Rv3508;logic_name=ena Chromosome ena mRNA 3931005 3936710 . + . ID=transcript:Rv3508;Parent=gene:Rv3508;Name=PE_PGRS54-1;biotype=protein_coding;transcript_id=Rv3508 Chromosome ena exon 3931005 3936710 . + . Parent=transcript:Rv3508;Name=Rv3508-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3508-1;rank=1 Chromosome ena CDS 3931005 3936710 . + 0 ID=CDS:Rv3508;Parent=transcript:Rv3508;protein_id=Rv3508 ### -Chromosome ena gene 3936877 3938424 . - . ID=gene:Rv3509c;Name=ilvX;biotype=protein_coding;description=Probable acetohydroxyacid synthase IlvX (acetolactate synthase);gene_id=Rv3509c;logic_name=ena +Chromosome ena gene 3936877 3938424 . - . ID=gene:Rv3509c;Name=ilvX;biotype=protein_coding;description=Probable acetohydroxyacid synthase IlvX (acetolactate synthase);gene_id=Rv3509c;logic_name=ena Chromosome ena mRNA 3936877 3938424 . - . ID=transcript:Rv3509c;Parent=gene:Rv3509c;Name=ilvX-1;biotype=protein_coding;transcript_id=Rv3509c Chromosome ena exon 3936877 3938424 . - . Parent=transcript:Rv3509c;Name=Rv3509c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3509c-1;rank=1 Chromosome ena CDS 3936877 3938424 . - 0 ID=CDS:Rv3509c;Parent=transcript:Rv3509c;protein_id=Rv3509c ### -Chromosome ena gene 3938421 3939257 . - . ID=gene:Rv3510c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3510c;logic_name=ena +Chromosome ena gene 3938421 3939257 . - . ID=gene:Rv3510c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3510c;logic_name=ena Chromosome ena mRNA 3938421 3939257 . - . ID=transcript:Rv3510c;Parent=gene:Rv3510c;biotype=protein_coding;transcript_id=Rv3510c Chromosome ena exon 3938421 3939257 . - . Parent=transcript:Rv3510c;Name=Rv3510c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3510c-1;rank=1 Chromosome ena CDS 3938421 3939257 . - 0 ID=CDS:Rv3510c;Parent=transcript:Rv3510c;protein_id=Rv3510c ### -Chromosome ena gene 3939617 3941761 . + . ID=gene:Rv3511;Name=PE_PGRS55;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS55;gene_id=Rv3511;logic_name=ena +Chromosome ena gene 3939617 3941761 . + . ID=gene:Rv3511;Name=PE_PGRS55;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS55;gene_id=Rv3511;logic_name=ena Chromosome ena mRNA 3939617 3941761 . + . ID=transcript:Rv3511;Parent=gene:Rv3511;Name=PE_PGRS55-1;biotype=protein_coding;transcript_id=Rv3511 Chromosome ena exon 3939617 3941761 . + . Parent=transcript:Rv3511;Name=Rv3511-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3511-1;rank=1 Chromosome ena CDS 3939617 3941761 . + 0 ID=CDS:Rv3511;Parent=transcript:Rv3511;protein_id=Rv3511 ### -Chromosome ena gene 3941724 3944963 . + . ID=gene:Rv3512;Name=PE_PGRS56;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS56;gene_id=Rv3512;logic_name=ena +Chromosome ena gene 3941724 3944963 . + . ID=gene:Rv3512;Name=PE_PGRS56;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS56;gene_id=Rv3512;logic_name=ena Chromosome ena mRNA 3941724 3944963 . + . ID=transcript:Rv3512;Parent=gene:Rv3512;Name=PE_PGRS56-1;biotype=protein_coding;transcript_id=Rv3512 Chromosome ena exon 3941724 3944963 . + . Parent=transcript:Rv3512;Name=Rv3512-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3512-1;rank=1 Chromosome ena CDS 3941724 3944963 . + 0 ID=CDS:Rv3512;Parent=transcript:Rv3512;protein_id=Rv3512 ### -Chromosome ena gene 3945092 3945748 . - . ID=gene:Rv3513c;Name=fadD18;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD18 (fragment) (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3513c;logic_name=ena +Chromosome ena gene 3945092 3945748 . - . ID=gene:Rv3513c;Name=fadD18;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD18 (fragment) (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3513c;logic_name=ena Chromosome ena mRNA 3945092 3945748 . - . ID=transcript:Rv3513c;Parent=gene:Rv3513c;Name=fadD18-1;biotype=protein_coding;transcript_id=Rv3513c Chromosome ena exon 3945092 3945748 . - . Parent=transcript:Rv3513c;Name=Rv3513c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3513c-1;rank=1 Chromosome ena CDS 3945092 3945748 . - 0 ID=CDS:Rv3513c;Parent=transcript:Rv3513c;protein_id=Rv3513c ### -Chromosome ena gene 3945794 3950263 . + . ID=gene:Rv3514;Name=PE_PGRS57;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS57;gene_id=Rv3514;logic_name=ena +Chromosome ena gene 3945794 3950263 . + . ID=gene:Rv3514;Name=PE_PGRS57;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS57;gene_id=Rv3514;logic_name=ena Chromosome ena mRNA 3945794 3950263 . + . ID=transcript:Rv3514;Parent=gene:Rv3514;Name=PE_PGRS57-1;biotype=protein_coding;transcript_id=Rv3514 Chromosome ena exon 3945794 3950263 . + . Parent=transcript:Rv3514;Name=Rv3514-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3514-1;rank=1 Chromosome ena CDS 3945794 3950263 . + 0 ID=CDS:Rv3514;Parent=transcript:Rv3514;protein_id=Rv3514 ### -Chromosome ena gene 3950824 3952470 . - . ID=gene:Rv3515c;Name=fadD19;biotype=protein_coding;description=Fatty-acid-CoA ligase FadD19 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3515c;logic_name=ena +Chromosome ena gene 3950824 3952470 . - . ID=gene:Rv3515c;Name=fadD19;biotype=protein_coding;description=Fatty-acid-CoA ligase FadD19 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3515c;logic_name=ena Chromosome ena mRNA 3950824 3952470 . - . ID=transcript:Rv3515c;Parent=gene:Rv3515c;Name=fadD19-1;biotype=protein_coding;transcript_id=Rv3515c Chromosome ena exon 3950824 3952470 . - . Parent=transcript:Rv3515c;Name=Rv3515c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3515c-1;rank=1 Chromosome ena CDS 3950824 3952470 . - 0 ID=CDS:Rv3515c;Parent=transcript:Rv3515c;protein_id=Rv3515c ### -Chromosome ena gene 3952544 3953335 . + . ID=gene:Rv3516;Name=echA19;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA19 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3516;logic_name=ena +Chromosome ena gene 3952544 3953335 . + . ID=gene:Rv3516;Name=echA19;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA19 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3516;logic_name=ena Chromosome ena mRNA 3952544 3953335 . + . ID=transcript:Rv3516;Parent=gene:Rv3516;Name=echA19-1;biotype=protein_coding;transcript_id=Rv3516 Chromosome ena exon 3952544 3953335 . + . Parent=transcript:Rv3516;Name=Rv3516-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3516-1;rank=1 Chromosome ena CDS 3952544 3953335 . + 0 ID=CDS:Rv3516;Parent=transcript:Rv3516;protein_id=Rv3516 ### -Chromosome ena gene 3953431 3954270 . + . ID=gene:Rv3517;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3517;logic_name=ena +Chromosome ena gene 3953431 3954270 . + . ID=gene:Rv3517;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3517;logic_name=ena Chromosome ena mRNA 3953431 3954270 . + . ID=transcript:Rv3517;Parent=gene:Rv3517;biotype=protein_coding;transcript_id=Rv3517 Chromosome ena exon 3953431 3954270 . + . Parent=transcript:Rv3517;Name=Rv3517-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3517-1;rank=1 Chromosome ena CDS 3953431 3954270 . + 0 ID=CDS:Rv3517;Parent=transcript:Rv3517;protein_id=Rv3517 ### -Chromosome ena gene 3954325 3955521 . - . ID=gene:Rv3518c;Name=cyp142;biotype=protein_coding;description=Probable cytochrome P450 monooxygenase 142 Cyp142;gene_id=Rv3518c;logic_name=ena +Chromosome ena gene 3954325 3955521 . - . ID=gene:Rv3518c;Name=cyp142;biotype=protein_coding;description=Probable cytochrome P450 monooxygenase 142 Cyp142;gene_id=Rv3518c;logic_name=ena Chromosome ena mRNA 3954325 3955521 . - . ID=transcript:Rv3518c;Parent=gene:Rv3518c;Name=cyp142-1;biotype=protein_coding;transcript_id=Rv3518c Chromosome ena exon 3954325 3955521 . - . Parent=transcript:Rv3518c;Name=Rv3518c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3518c-1;rank=1 Chromosome ena CDS 3954325 3955521 . - 0 ID=CDS:Rv3518c;Parent=transcript:Rv3518c;protein_id=Rv3518c ### -Chromosome ena gene 3955550 3956260 . + . ID=gene:Rv3519;biotype=protein_coding;description=Unknown protein;gene_id=Rv3519;logic_name=ena +Chromosome ena gene 3955550 3956260 . + . ID=gene:Rv3519;biotype=protein_coding;description=Unknown protein;gene_id=Rv3519;logic_name=ena Chromosome ena mRNA 3955550 3956260 . + . ID=transcript:Rv3519;Parent=gene:Rv3519;biotype=protein_coding;transcript_id=Rv3519 Chromosome ena exon 3955550 3956260 . + . Parent=transcript:Rv3519;Name=Rv3519-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3519-1;rank=1 Chromosome ena CDS 3955550 3956260 . + 0 ID=CDS:Rv3519;Parent=transcript:Rv3519;protein_id=Rv3519 ### -Chromosome ena gene 3956325 3957368 . - . ID=gene:Rv3520c;biotype=protein_coding;description=Possible coenzyme F420-dependent oxidoreductase;gene_id=Rv3520c;logic_name=ena +Chromosome ena gene 3956325 3957368 . - . ID=gene:Rv3520c;biotype=protein_coding;description=Possible coenzyme F420-dependent oxidoreductase;gene_id=Rv3520c;logic_name=ena Chromosome ena mRNA 3956325 3957368 . - . ID=transcript:Rv3520c;Parent=gene:Rv3520c;biotype=protein_coding;transcript_id=Rv3520c Chromosome ena exon 3956325 3957368 . - . Parent=transcript:Rv3520c;Name=Rv3520c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3520c-1;rank=1 Chromosome ena CDS 3956325 3957368 . - 0 ID=CDS:Rv3520c;Parent=transcript:Rv3520c;protein_id=Rv3520c ### -Chromosome ena gene 3957521 3958432 . + . ID=gene:Rv3521;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3521;logic_name=ena +Chromosome ena gene 3957521 3958432 . + . ID=gene:Rv3521;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3521;logic_name=ena Chromosome ena mRNA 3957521 3958432 . + . ID=transcript:Rv3521;Parent=gene:Rv3521;biotype=protein_coding;transcript_id=Rv3521 Chromosome ena exon 3957521 3958432 . + . Parent=transcript:Rv3521;Name=Rv3521-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3521-1;rank=1 Chromosome ena CDS 3957521 3958432 . + 0 ID=CDS:Rv3521;Parent=transcript:Rv3521;protein_id=Rv3521 ### -Chromosome ena gene 3958448 3959512 . + . ID=gene:Rv3522;Name=ltp4;biotype=protein_coding;description=Possible lipid transfer protein or keto acyl-CoA thiolase Ltp4;gene_id=Rv3522;logic_name=ena +Chromosome ena gene 3958448 3959512 . + . ID=gene:Rv3522;Name=ltp4;biotype=protein_coding;description=Possible lipid transfer protein or keto acyl-CoA thiolase Ltp4;gene_id=Rv3522;logic_name=ena Chromosome ena mRNA 3958448 3959512 . + . ID=transcript:Rv3522;Parent=gene:Rv3522;Name=ltp4-1;biotype=protein_coding;transcript_id=Rv3522 Chromosome ena exon 3958448 3959512 . + . Parent=transcript:Rv3522;Name=Rv3522-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3522-1;rank=1 Chromosome ena CDS 3958448 3959512 . + 0 ID=CDS:Rv3522;Parent=transcript:Rv3522;protein_id=Rv3522 ### -Chromosome ena gene 3959529 3960713 . + . ID=gene:Rv3523;Name=ltp3;biotype=protein_coding;description=Probable lipid carrier protein or keto acyl-CoA thiolase Ltp3;gene_id=Rv3523;logic_name=ena +Chromosome ena gene 3959529 3960713 . + . ID=gene:Rv3523;Name=ltp3;biotype=protein_coding;description=Probable lipid carrier protein or keto acyl-CoA thiolase Ltp3;gene_id=Rv3523;logic_name=ena Chromosome ena mRNA 3959529 3960713 . + . ID=transcript:Rv3523;Parent=gene:Rv3523;Name=ltp3-1;biotype=protein_coding;transcript_id=Rv3523 Chromosome ena exon 3959529 3960713 . + . Parent=transcript:Rv3523;Name=Rv3523-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3523-1;rank=1 Chromosome ena CDS 3959529 3960713 . + 0 ID=CDS:Rv3523;Parent=transcript:Rv3523;protein_id=Rv3523 ### -Chromosome ena gene 3960755 3961786 . + . ID=gene:Rv3524;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3524;logic_name=ena +Chromosome ena gene 3960755 3961786 . + . ID=gene:Rv3524;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3524;logic_name=ena Chromosome ena mRNA 3960755 3961786 . + . ID=transcript:Rv3524;Parent=gene:Rv3524;biotype=protein_coding;transcript_id=Rv3524 Chromosome ena exon 3960755 3961786 . + . Parent=transcript:Rv3524;Name=Rv3524-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3524-1;rank=1 Chromosome ena CDS 3960755 3961786 . + 0 ID=CDS:Rv3524;Parent=transcript:Rv3524;protein_id=Rv3524 ### -Chromosome ena gene 3961800 3962324 . - . ID=gene:Rv3525c;biotype=protein_coding;description=Possible siderophore-binding protein;gene_id=Rv3525c;logic_name=ena +Chromosome ena gene 3961800 3962324 . - . ID=gene:Rv3525c;biotype=protein_coding;description=Possible siderophore-binding protein;gene_id=Rv3525c;logic_name=ena Chromosome ena mRNA 3961800 3962324 . - . ID=transcript:Rv3525c;Parent=gene:Rv3525c;biotype=protein_coding;transcript_id=Rv3525c Chromosome ena exon 3961800 3962324 . - . Parent=transcript:Rv3525c;Name=Rv3525c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3525c-1;rank=1 Chromosome ena CDS 3961800 3962324 . - 0 ID=CDS:Rv3525c;Parent=transcript:Rv3525c;protein_id=Rv3525c ### -Chromosome ena gene 3962439 3963599 . + . ID=gene:Rv3526;Name=kshA;biotype=protein_coding;description=Oxygenase component of 3-ketosteroid-9-alpha-hydroxylase KshA;gene_id=Rv3526;logic_name=ena +Chromosome ena gene 3962439 3963599 . + . ID=gene:Rv3526;Name=kshA;biotype=protein_coding;description=Oxygenase component of 3-ketosteroid-9-alpha-hydroxylase KshA;gene_id=Rv3526;logic_name=ena Chromosome ena mRNA 3962439 3963599 . + . ID=transcript:Rv3526;Parent=gene:Rv3526;Name=kshA-1;biotype=protein_coding;transcript_id=Rv3526 Chromosome ena exon 3962439 3963599 . + . Parent=transcript:Rv3526;Name=Rv3526-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3526-1;rank=1 Chromosome ena CDS 3962439 3963599 . + 0 ID=CDS:Rv3526;Parent=transcript:Rv3526;protein_id=Rv3526 ### -Chromosome ena gene 3963605 3964054 . + . ID=gene:Rv3527;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3527;logic_name=ena +Chromosome ena gene 3963605 3964054 . + . ID=gene:Rv3527;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3527;logic_name=ena Chromosome ena mRNA 3963605 3964054 . + . ID=transcript:Rv3527;Parent=gene:Rv3527;biotype=protein_coding;transcript_id=Rv3527 Chromosome ena exon 3963605 3964054 . + . Parent=transcript:Rv3527;Name=Rv3527-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3527-1;rank=1 Chromosome ena CDS 3963605 3964054 . + 0 ID=CDS:Rv3527;Parent=transcript:Rv3527;protein_id=Rv3527 ### -Chromosome ena gene 3964479 3965192 . - . ID=gene:Rv3528c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3528c;logic_name=ena +Chromosome ena gene 3964479 3965192 . - . ID=gene:Rv3528c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3528c;logic_name=ena Chromosome ena mRNA 3964479 3965192 . - . ID=transcript:Rv3528c;Parent=gene:Rv3528c;biotype=protein_coding;transcript_id=Rv3528c Chromosome ena exon 3964479 3965192 . - . Parent=transcript:Rv3528c;Name=Rv3528c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3528c-1;rank=1 Chromosome ena CDS 3964479 3965192 . - 0 ID=CDS:Rv3528c;Parent=transcript:Rv3528c;protein_id=Rv3528c ### -Chromosome ena gene 3965884 3967038 . - . ID=gene:Rv3529c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3529c;logic_name=ena +Chromosome ena gene 3965884 3967038 . - . ID=gene:Rv3529c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3529c;logic_name=ena Chromosome ena mRNA 3965884 3967038 . - . ID=transcript:Rv3529c;Parent=gene:Rv3529c;biotype=protein_coding;transcript_id=Rv3529c Chromosome ena exon 3965884 3967038 . - . Parent=transcript:Rv3529c;Name=Rv3529c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3529c-1;rank=1 Chromosome ena CDS 3965884 3967038 . - 0 ID=CDS:Rv3529c;Parent=transcript:Rv3529c;protein_id=Rv3529c ### -Chromosome ena gene 3967038 3967820 . - . ID=gene:Rv3530c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3530c;logic_name=ena +Chromosome ena gene 3967038 3967820 . - . ID=gene:Rv3530c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3530c;logic_name=ena Chromosome ena mRNA 3967038 3967820 . - . ID=transcript:Rv3530c;Parent=gene:Rv3530c;biotype=protein_coding;transcript_id=Rv3530c Chromosome ena exon 3967038 3967820 . - . Parent=transcript:Rv3530c;Name=Rv3530c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3530c-1;rank=1 Chromosome ena CDS 3967038 3967820 . - 0 ID=CDS:Rv3530c;Parent=transcript:Rv3530c;protein_id=Rv3530c ### -Chromosome ena gene 3967817 3968944 . - . ID=gene:Rv3531c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3531c;logic_name=ena +Chromosome ena gene 3967817 3968944 . - . ID=gene:Rv3531c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3531c;logic_name=ena Chromosome ena mRNA 3967817 3968944 . - . ID=transcript:Rv3531c;Parent=gene:Rv3531c;biotype=protein_coding;transcript_id=Rv3531c Chromosome ena exon 3967817 3968944 . - . Parent=transcript:Rv3531c;Name=Rv3531c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3531c-1;rank=1 Chromosome ena CDS 3967817 3968944 . - 0 ID=CDS:Rv3531c;Parent=transcript:Rv3531c;protein_id=Rv3531c ### -Chromosome ena gene 3969343 3970563 . + . ID=gene:Rv3532;Name=PPE61;biotype=protein_coding;description=PPE family protein PPE61;gene_id=Rv3532;logic_name=ena +Chromosome ena gene 3969343 3970563 . + . ID=gene:Rv3532;Name=PPE61;biotype=protein_coding;description=PPE family protein PPE61;gene_id=Rv3532;logic_name=ena Chromosome ena mRNA 3969343 3970563 . + . ID=transcript:Rv3532;Parent=gene:Rv3532;Name=PPE61-1;biotype=protein_coding;transcript_id=Rv3532 Chromosome ena exon 3969343 3970563 . + . Parent=transcript:Rv3532;Name=Rv3532-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3532-1;rank=1 Chromosome ena CDS 3969343 3970563 . + 0 ID=CDS:Rv3532;Parent=transcript:Rv3532;protein_id=Rv3532 ### -Chromosome ena gene 3970705 3972453 . - . ID=gene:Rv3533c;Name=PPE62;biotype=protein_coding;description=PPE family protein PPE62;gene_id=Rv3533c;logic_name=ena +Chromosome ena gene 3970705 3972453 . - . ID=gene:Rv3533c;Name=PPE62;biotype=protein_coding;description=PPE family protein PPE62;gene_id=Rv3533c;logic_name=ena Chromosome ena mRNA 3970705 3972453 . - . ID=transcript:Rv3533c;Parent=gene:Rv3533c;Name=PPE62-1;biotype=protein_coding;transcript_id=Rv3533c Chromosome ena exon 3970705 3972453 . - . Parent=transcript:Rv3533c;Name=Rv3533c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3533c-1;rank=1 Chromosome ena CDS 3970705 3972453 . - 0 ID=CDS:Rv3533c;Parent=transcript:Rv3533c;protein_id=Rv3533c ### -Chromosome ena gene 3972552 3973592 . - . ID=gene:Rv3534c;Name=hsaF;biotype=protein_coding;description=Probable 4-hydroxy-2-oxovalerate aldolase (HOA);gene_id=Rv3534c;logic_name=ena +Chromosome ena gene 3972552 3973592 . - . ID=gene:Rv3534c;Name=hsaF;biotype=protein_coding;description=Probable 4-hydroxy-2-oxovalerate aldolase (HOA);gene_id=Rv3534c;logic_name=ena Chromosome ena mRNA 3972552 3973592 . - . ID=transcript:Rv3534c;Parent=gene:Rv3534c;Name=hsaF-1;biotype=protein_coding;transcript_id=Rv3534c Chromosome ena exon 3972552 3973592 . - . Parent=transcript:Rv3534c;Name=Rv3534c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3534c-1;rank=1 Chromosome ena CDS 3972552 3973592 . - 0 ID=CDS:Rv3534c;Parent=transcript:Rv3534c;protein_id=Rv3534c ### -Chromosome ena gene 3973589 3974500 . - . ID=gene:Rv3535c;Name=hsaG;biotype=protein_coding;description=Probable acetaldehyde dehydrogenase (acetaldehyde dehydrogenase [acetylating]);gene_id=Rv3535c;logic_name=ena +Chromosome ena gene 3973589 3974500 . - . ID=gene:Rv3535c;Name=hsaG;biotype=protein_coding;description=Probable acetaldehyde dehydrogenase (acetaldehyde dehydrogenase [acetylating]);gene_id=Rv3535c;logic_name=ena Chromosome ena mRNA 3973589 3974500 . - . ID=transcript:Rv3535c;Parent=gene:Rv3535c;Name=hsaG-1;biotype=protein_coding;transcript_id=Rv3535c Chromosome ena exon 3973589 3974500 . - . Parent=transcript:Rv3535c;Name=Rv3535c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3535c-1;rank=1 Chromosome ena CDS 3973589 3974500 . - 0 ID=CDS:Rv3535c;Parent=transcript:Rv3535c;protein_id=Rv3535c ### -Chromosome ena gene 3974511 3975296 . - . ID=gene:Rv3536c;Name=hsaE;biotype=protein_coding;description=Probable hydratase;gene_id=Rv3536c;logic_name=ena +Chromosome ena gene 3974511 3975296 . - . ID=gene:Rv3536c;Name=hsaE;biotype=protein_coding;description=Probable hydratase;gene_id=Rv3536c;logic_name=ena Chromosome ena mRNA 3974511 3975296 . - . ID=transcript:Rv3536c;Parent=gene:Rv3536c;Name=hsaE-1;biotype=protein_coding;transcript_id=Rv3536c Chromosome ena exon 3974511 3975296 . - . Parent=transcript:Rv3536c;Name=Rv3536c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3536c-1;rank=1 Chromosome ena CDS 3974511 3975296 . - 0 ID=CDS:Rv3536c;Parent=transcript:Rv3536c;protein_id=Rv3536c ### -Chromosome ena gene 3975369 3977060 . + . ID=gene:Rv3537;Name=kstD;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv3537;logic_name=ena +Chromosome ena gene 3975369 3977060 . + . ID=gene:Rv3537;Name=kstD;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv3537;logic_name=ena Chromosome ena mRNA 3975369 3977060 . + . ID=transcript:Rv3537;Parent=gene:Rv3537;Name=kstD-1;biotype=protein_coding;transcript_id=Rv3537 Chromosome ena exon 3975369 3977060 . + . Parent=transcript:Rv3537;Name=Rv3537-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3537-1;rank=1 Chromosome ena CDS 3975369 3977060 . + 0 ID=CDS:Rv3537;Parent=transcript:Rv3537;protein_id=Rv3537 ### -Chromosome ena gene 3977062 3977922 . + . ID=gene:Rv3538;biotype=protein_coding;description=Probable dehydrogenase. Possible 2-enoyl acyl-CoA hydratase.;gene_id=Rv3538;logic_name=ena +Chromosome ena gene 3977062 3977922 . + . ID=gene:Rv3538;biotype=protein_coding;description=Probable dehydrogenase. Possible 2-enoyl acyl-CoA hydratase.;gene_id=Rv3538;logic_name=ena Chromosome ena mRNA 3977062 3977922 . + . ID=transcript:Rv3538;Parent=gene:Rv3538;biotype=protein_coding;transcript_id=Rv3538 Chromosome ena exon 3977062 3977922 . + . Parent=transcript:Rv3538;Name=Rv3538-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3538-1;rank=1 Chromosome ena CDS 3977062 3977922 . + 0 ID=CDS:Rv3538;Parent=transcript:Rv3538;protein_id=Rv3538 ### -Chromosome ena gene 3978059 3979498 . + . ID=gene:Rv3539;Name=PPE63;biotype=protein_coding;description=PPE family protein PPE63;gene_id=Rv3539;logic_name=ena +Chromosome ena gene 3978059 3979498 . + . ID=gene:Rv3539;Name=PPE63;biotype=protein_coding;description=PPE family protein PPE63;gene_id=Rv3539;logic_name=ena Chromosome ena mRNA 3978059 3979498 . + . ID=transcript:Rv3539;Parent=gene:Rv3539;Name=PPE63-1;biotype=protein_coding;transcript_id=Rv3539 Chromosome ena exon 3978059 3979498 . + . Parent=transcript:Rv3539;Name=Rv3539-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3539-1;rank=1 Chromosome ena CDS 3978059 3979498 . + 0 ID=CDS:Rv3539;Parent=transcript:Rv3539;protein_id=Rv3539 ### -Chromosome ena gene 3979499 3980659 . - . ID=gene:Rv3540c;Name=ltp2;biotype=protein_coding;description=Probable lipid transfer protein or keto acyl-CoA thiolase Ltp2;gene_id=Rv3540c;logic_name=ena +Chromosome ena gene 3979499 3980659 . - . ID=gene:Rv3540c;Name=ltp2;biotype=protein_coding;description=Probable lipid transfer protein or keto acyl-CoA thiolase Ltp2;gene_id=Rv3540c;logic_name=ena Chromosome ena mRNA 3979499 3980659 . - . ID=transcript:Rv3540c;Parent=gene:Rv3540c;Name=ltp2-1;biotype=protein_coding;transcript_id=Rv3540c Chromosome ena exon 3979499 3980659 . - . Parent=transcript:Rv3540c;Name=Rv3540c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3540c-1;rank=1 Chromosome ena CDS 3979499 3980659 . - 0 ID=CDS:Rv3540c;Parent=transcript:Rv3540c;protein_id=Rv3540c ### -Chromosome ena gene 3980659 3981048 . - . ID=gene:Rv3541c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3541c;logic_name=ena +Chromosome ena gene 3980659 3981048 . - . ID=gene:Rv3541c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3541c;logic_name=ena Chromosome ena mRNA 3980659 3981048 . - . ID=transcript:Rv3541c;Parent=gene:Rv3541c;biotype=protein_coding;transcript_id=Rv3541c Chromosome ena exon 3980659 3981048 . - . Parent=transcript:Rv3541c;Name=Rv3541c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3541c-1;rank=1 Chromosome ena CDS 3980659 3981048 . - 0 ID=CDS:Rv3541c;Parent=transcript:Rv3541c;protein_id=Rv3541c ### -Chromosome ena gene 3981045 3981980 . - . ID=gene:Rv3542c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3542c;logic_name=ena +Chromosome ena gene 3981045 3981980 . - . ID=gene:Rv3542c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3542c;logic_name=ena Chromosome ena mRNA 3981045 3981980 . - . ID=transcript:Rv3542c;Parent=gene:Rv3542c;biotype=protein_coding;transcript_id=Rv3542c Chromosome ena exon 3981045 3981980 . - . Parent=transcript:Rv3542c;Name=Rv3542c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3542c-1;rank=1 Chromosome ena CDS 3981045 3981980 . - 0 ID=CDS:Rv3542c;Parent=transcript:Rv3542c;protein_id=Rv3542c ### -Chromosome ena gene 3981977 3983140 . - . ID=gene:Rv3543c;Name=fadE29;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE29;gene_id=Rv3543c;logic_name=ena +Chromosome ena gene 3981977 3983140 . - . ID=gene:Rv3543c;Name=fadE29;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE29;gene_id=Rv3543c;logic_name=ena Chromosome ena mRNA 3981977 3983140 . - . ID=transcript:Rv3543c;Parent=gene:Rv3543c;Name=fadE29-1;biotype=protein_coding;transcript_id=Rv3543c Chromosome ena exon 3981977 3983140 . - . Parent=transcript:Rv3543c;Name=Rv3543c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3543c-1;rank=1 Chromosome ena CDS 3981977 3983140 . - 0 ID=CDS:Rv3543c;Parent=transcript:Rv3543c;protein_id=Rv3543c ### -Chromosome ena gene 3983125 3984144 . - . ID=gene:Rv3544c;Name=fadE28;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE28;gene_id=Rv3544c;logic_name=ena +Chromosome ena gene 3983125 3984144 . - . ID=gene:Rv3544c;Name=fadE28;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE28;gene_id=Rv3544c;logic_name=ena Chromosome ena mRNA 3983125 3984144 . - . ID=transcript:Rv3544c;Parent=gene:Rv3544c;Name=fadE28-1;biotype=protein_coding;transcript_id=Rv3544c Chromosome ena exon 3983125 3984144 . - . Parent=transcript:Rv3544c;Name=Rv3544c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3544c-1;rank=1 Chromosome ena CDS 3983125 3984144 . - 0 ID=CDS:Rv3544c;Parent=transcript:Rv3544c;protein_id=Rv3544c ### -Chromosome ena gene 3984144 3985445 . - . ID=gene:Rv3545c;Name=cyp125;biotype=protein_coding;description=Probable cytochrome P450 125 Cyp125;gene_id=Rv3545c;logic_name=ena +Chromosome ena gene 3984144 3985445 . - . ID=gene:Rv3545c;Name=cyp125;biotype=protein_coding;description=Probable cytochrome P450 125 Cyp125;gene_id=Rv3545c;logic_name=ena Chromosome ena mRNA 3984144 3985445 . - . ID=transcript:Rv3545c;Parent=gene:Rv3545c;Name=cyp125-1;biotype=protein_coding;transcript_id=Rv3545c Chromosome ena exon 3984144 3985445 . - . Parent=transcript:Rv3545c;Name=Rv3545c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3545c-1;rank=1 Chromosome ena CDS 3984144 3985445 . - 0 ID=CDS:Rv3545c;Parent=transcript:Rv3545c;protein_id=Rv3545c ### -Chromosome ena gene 3985557 3986732 . + . ID=gene:Rv3546;Name=fadA5;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA5 (acetoacetyl-CoA thiolase);gene_id=Rv3546;logic_name=ena +Chromosome ena gene 3985557 3986732 . + . ID=gene:Rv3546;Name=fadA5;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA5 (acetoacetyl-CoA thiolase);gene_id=Rv3546;logic_name=ena Chromosome ena mRNA 3985557 3986732 . + . ID=transcript:Rv3546;Parent=gene:Rv3546;Name=fadA5-1;biotype=protein_coding;transcript_id=Rv3546 Chromosome ena exon 3985557 3986732 . + . Parent=transcript:Rv3546;Name=Rv3546-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3546-1;rank=1 Chromosome ena CDS 3985557 3986732 . + 0 ID=CDS:Rv3546;Parent=transcript:Rv3546;protein_id=Rv3546 ### -Chromosome ena gene 3986844 3987299 . + . ID=gene:Rv3547;Name=ddn;biotype=protein_coding;description=Deazaflavin-dependent nitroreductase Ddn;gene_id=Rv3547;logic_name=ena +Chromosome ena gene 3986844 3987299 . + . ID=gene:Rv3547;Name=ddn;biotype=protein_coding;description=Deazaflavin-dependent nitroreductase Ddn;gene_id=Rv3547;logic_name=ena Chromosome ena mRNA 3986844 3987299 . + . ID=transcript:Rv3547;Parent=gene:Rv3547;Name=ddn-1;biotype=protein_coding;transcript_id=Rv3547 Chromosome ena exon 3986844 3987299 . + . Parent=transcript:Rv3547;Name=Rv3547-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3547-1;rank=1 Chromosome ena CDS 3986844 3987299 . + 0 ID=CDS:Rv3547;Parent=transcript:Rv3547;protein_id=Rv3547 ### -Chromosome ena gene 3987382 3988296 . - . ID=gene:Rv3548c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3548c;logic_name=ena +Chromosome ena gene 3987382 3988296 . - . ID=gene:Rv3548c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3548c;logic_name=ena Chromosome ena mRNA 3987382 3988296 . - . ID=transcript:Rv3548c;Parent=gene:Rv3548c;biotype=protein_coding;transcript_id=Rv3548c Chromosome ena exon 3987382 3988296 . - . Parent=transcript:Rv3548c;Name=Rv3548c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3548c-1;rank=1 Chromosome ena CDS 3987382 3988296 . - 0 ID=CDS:Rv3548c;Parent=transcript:Rv3548c;protein_id=Rv3548c ### -Chromosome ena gene 3988319 3989098 . - . ID=gene:Rv3549c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3549c;logic_name=ena +Chromosome ena gene 3988319 3989098 . - . ID=gene:Rv3549c;biotype=protein_coding;description=Probable short-chain type dehydrogenase/reductase;gene_id=Rv3549c;logic_name=ena Chromosome ena mRNA 3988319 3989098 . - . ID=transcript:Rv3549c;Parent=gene:Rv3549c;biotype=protein_coding;transcript_id=Rv3549c Chromosome ena exon 3988319 3989098 . - . Parent=transcript:Rv3549c;Name=Rv3549c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3549c-1;rank=1 Chromosome ena CDS 3988319 3989098 . - 0 ID=CDS:Rv3549c;Parent=transcript:Rv3549c;protein_id=Rv3549c ### -Chromosome ena gene 3989153 3989896 . + . ID=gene:Rv3550;Name=echA20;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA20 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3550;logic_name=ena +Chromosome ena gene 3989153 3989896 . + . ID=gene:Rv3550;Name=echA20;biotype=protein_coding;description=Probable enoyl-CoA hydratase EchA20 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3550;logic_name=ena Chromosome ena mRNA 3989153 3989896 . + . ID=transcript:Rv3550;Parent=gene:Rv3550;Name=echA20-1;biotype=protein_coding;transcript_id=Rv3550 Chromosome ena exon 3989153 3989896 . + . Parent=transcript:Rv3550;Name=Rv3550-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3550-1;rank=1 Chromosome ena CDS 3989153 3989896 . + 0 ID=CDS:Rv3550;Parent=transcript:Rv3550;protein_id=Rv3550 ### -Chromosome ena gene 3989896 3990774 . + . ID=gene:Rv3551;biotype=protein_coding;description=Possible CoA-transferase (alpha subunit);gene_id=Rv3551;logic_name=ena +Chromosome ena gene 3989896 3990774 . + . ID=gene:Rv3551;biotype=protein_coding;description=Possible CoA-transferase (alpha subunit);gene_id=Rv3551;logic_name=ena Chromosome ena mRNA 3989896 3990774 . + . ID=transcript:Rv3551;Parent=gene:Rv3551;biotype=protein_coding;transcript_id=Rv3551 Chromosome ena exon 3989896 3990774 . + . Parent=transcript:Rv3551;Name=Rv3551-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3551-1;rank=1 Chromosome ena CDS 3989896 3990774 . + 0 ID=CDS:Rv3551;Parent=transcript:Rv3551;protein_id=Rv3551 ### -Chromosome ena gene 3990771 3991523 . + . ID=gene:Rv3552;biotype=protein_coding;description=Possible CoA-transferase (beta subunit);gene_id=Rv3552;logic_name=ena +Chromosome ena gene 3990771 3991523 . + . ID=gene:Rv3552;biotype=protein_coding;description=Possible CoA-transferase (beta subunit);gene_id=Rv3552;logic_name=ena Chromosome ena mRNA 3990771 3991523 . + . ID=transcript:Rv3552;Parent=gene:Rv3552;biotype=protein_coding;transcript_id=Rv3552 Chromosome ena exon 3990771 3991523 . + . Parent=transcript:Rv3552;Name=Rv3552-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3552-1;rank=1 Chromosome ena CDS 3990771 3991523 . + 0 ID=CDS:Rv3552;Parent=transcript:Rv3552;protein_id=Rv3552 ### -Chromosome ena gene 3991621 3992688 . + . ID=gene:Rv3553;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3553;logic_name=ena +Chromosome ena gene 3991621 3992688 . + . ID=gene:Rv3553;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3553;logic_name=ena Chromosome ena mRNA 3991621 3992688 . + . ID=transcript:Rv3553;Parent=gene:Rv3553;biotype=protein_coding;transcript_id=Rv3553 Chromosome ena exon 3991621 3992688 . + . Parent=transcript:Rv3553;Name=Rv3553-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3553-1;rank=1 Chromosome ena CDS 3991621 3992688 . + 0 ID=CDS:Rv3553;Parent=transcript:Rv3553;protein_id=Rv3553 ### -Chromosome ena gene 3992685 3994742 . + . ID=gene:Rv3554;Name=fdxB;biotype=protein_coding;description=Possible electron transfer protein FdxB;gene_id=Rv3554;logic_name=ena +Chromosome ena gene 3992685 3994742 . + . ID=gene:Rv3554;Name=fdxB;biotype=protein_coding;description=Possible electron transfer protein FdxB;gene_id=Rv3554;logic_name=ena Chromosome ena mRNA 3992685 3994742 . + . ID=transcript:Rv3554;Parent=gene:Rv3554;Name=fdxB-1;biotype=protein_coding;transcript_id=Rv3554 Chromosome ena exon 3992685 3994742 . + . Parent=transcript:Rv3554;Name=Rv3554-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3554-1;rank=1 Chromosome ena CDS 3992685 3994742 . + 0 ID=CDS:Rv3554;Parent=transcript:Rv3554;protein_id=Rv3554 ### -Chromosome ena gene 3994830 3995699 . - . ID=gene:Rv3555c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3555c;logic_name=ena +Chromosome ena gene 3994830 3995699 . - . ID=gene:Rv3555c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3555c;logic_name=ena Chromosome ena mRNA 3994830 3995699 . - . ID=transcript:Rv3555c;Parent=gene:Rv3555c;biotype=protein_coding;transcript_id=Rv3555c Chromosome ena exon 3994830 3995699 . - . Parent=transcript:Rv3555c;Name=Rv3555c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3555c-1;rank=1 Chromosome ena CDS 3994830 3995699 . - 0 ID=CDS:Rv3555c;Parent=transcript:Rv3555c;protein_id=Rv3555c ### -Chromosome ena gene 3995804 3996964 . - . ID=gene:Rv3556c;Name=fadA6;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA6 (acetoacetyl-CoA thiolase);gene_id=Rv3556c;logic_name=ena +Chromosome ena gene 3995804 3996964 . - . ID=gene:Rv3556c;Name=fadA6;biotype=protein_coding;description=Probable acetyl-CoA acetyltransferase FadA6 (acetoacetyl-CoA thiolase);gene_id=Rv3556c;logic_name=ena Chromosome ena mRNA 3995804 3996964 . - . ID=transcript:Rv3556c;Parent=gene:Rv3556c;Name=fadA6-1;biotype=protein_coding;transcript_id=Rv3556c Chromosome ena exon 3995804 3996964 . - . Parent=transcript:Rv3556c;Name=Rv3556c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3556c-1;rank=1 Chromosome ena CDS 3995804 3996964 . - 0 ID=CDS:Rv3556c;Parent=transcript:Rv3556c;protein_id=Rv3556c ### -Chromosome ena gene 3997029 3997631 . - . ID=gene:Rv3557c;biotype=protein_coding;description=Transcriptional regulatory protein (probably TetR-family);gene_id=Rv3557c;logic_name=ena +Chromosome ena gene 3997029 3997631 . - . ID=gene:Rv3557c;biotype=protein_coding;description=Transcriptional regulatory protein (probably TetR-family);gene_id=Rv3557c;logic_name=ena Chromosome ena mRNA 3997029 3997631 . - . ID=transcript:Rv3557c;Parent=gene:Rv3557c;biotype=protein_coding;transcript_id=Rv3557c Chromosome ena exon 3997029 3997631 . - . Parent=transcript:Rv3557c;Name=Rv3557c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3557c-1;rank=1 Chromosome ena CDS 3997029 3997631 . - 0 ID=CDS:Rv3557c;Parent=transcript:Rv3557c;protein_id=Rv3557c ### -Chromosome ena gene 3997980 3999638 . + . ID=gene:Rv3558;Name=PPE64;biotype=protein_coding;description=PPE family protein PPE64;gene_id=Rv3558;logic_name=ena +Chromosome ena gene 3997980 3999638 . + . ID=gene:Rv3558;Name=PPE64;biotype=protein_coding;description=PPE family protein PPE64;gene_id=Rv3558;logic_name=ena Chromosome ena mRNA 3997980 3999638 . + . ID=transcript:Rv3558;Parent=gene:Rv3558;Name=PPE64-1;biotype=protein_coding;transcript_id=Rv3558 Chromosome ena exon 3997980 3999638 . + . Parent=transcript:Rv3558;Name=Rv3558-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3558-1;rank=1 Chromosome ena CDS 3997980 3999638 . + 0 ID=CDS:Rv3558;Parent=transcript:Rv3558;protein_id=Rv3558 ### -Chromosome ena gene 3999647 4000435 . - . ID=gene:Rv3559c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv3559c;logic_name=ena +Chromosome ena gene 3999647 4000435 . - . ID=gene:Rv3559c;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv3559c;logic_name=ena Chromosome ena mRNA 3999647 4000435 . - . ID=transcript:Rv3559c;Parent=gene:Rv3559c;biotype=protein_coding;transcript_id=Rv3559c Chromosome ena exon 3999647 4000435 . - . Parent=transcript:Rv3559c;Name=Rv3559c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3559c-1;rank=1 Chromosome ena CDS 3999647 4000435 . - 0 ID=CDS:Rv3559c;Parent=transcript:Rv3559c;protein_id=Rv3559c ### -Chromosome ena gene 4000432 4001589 . - . ID=gene:Rv3560c;Name=fadE30;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE30;gene_id=Rv3560c;logic_name=ena +Chromosome ena gene 4000432 4001589 . - . ID=gene:Rv3560c;Name=fadE30;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE30;gene_id=Rv3560c;logic_name=ena Chromosome ena mRNA 4000432 4001589 . - . ID=transcript:Rv3560c;Parent=gene:Rv3560c;Name=fadE30-1;biotype=protein_coding;transcript_id=Rv3560c Chromosome ena exon 4000432 4001589 . - . Parent=transcript:Rv3560c;Name=Rv3560c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3560c-1;rank=1 Chromosome ena CDS 4000432 4001589 . - 0 ID=CDS:Rv3560c;Parent=transcript:Rv3560c;protein_id=Rv3560c ### -Chromosome ena gene 4001637 4003160 . + . ID=gene:Rv3561;Name=fadD3;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD3 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3561;logic_name=ena +Chromosome ena gene 4001637 4003160 . + . ID=gene:Rv3561;Name=fadD3;biotype=protein_coding;description=Probable fatty-acid-CoA ligase FadD3 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase);gene_id=Rv3561;logic_name=ena Chromosome ena mRNA 4001637 4003160 . + . ID=transcript:Rv3561;Parent=gene:Rv3561;Name=fadD3-1;biotype=protein_coding;transcript_id=Rv3561 Chromosome ena exon 4001637 4003160 . + . Parent=transcript:Rv3561;Name=Rv3561-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3561-1;rank=1 Chromosome ena CDS 4001637 4003160 . + 0 ID=CDS:Rv3561;Parent=transcript:Rv3561;protein_id=Rv3561 ### -Chromosome ena gene 4003161 4004294 . + . ID=gene:Rv3562;Name=fadE31;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE31;gene_id=Rv3562;logic_name=ena +Chromosome ena gene 4003161 4004294 . + . ID=gene:Rv3562;Name=fadE31;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE31;gene_id=Rv3562;logic_name=ena Chromosome ena mRNA 4003161 4004294 . + . ID=transcript:Rv3562;Parent=gene:Rv3562;Name=fadE31-1;biotype=protein_coding;transcript_id=Rv3562 Chromosome ena exon 4003161 4004294 . + . Parent=transcript:Rv3562;Name=Rv3562-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3562-1;rank=1 Chromosome ena CDS 4003161 4004294 . + 0 ID=CDS:Rv3562;Parent=transcript:Rv3562;protein_id=Rv3562 ### -Chromosome ena gene 4004291 4005250 . + . ID=gene:Rv3563;Name=fadE32;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE32;gene_id=Rv3563;logic_name=ena +Chromosome ena gene 4004291 4005250 . + . ID=gene:Rv3563;Name=fadE32;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE32;gene_id=Rv3563;logic_name=ena Chromosome ena mRNA 4004291 4005250 . + . ID=transcript:Rv3563;Parent=gene:Rv3563;Name=fadE32-1;biotype=protein_coding;transcript_id=Rv3563 Chromosome ena exon 4004291 4005250 . + . Parent=transcript:Rv3563;Name=Rv3563-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3563-1;rank=1 Chromosome ena CDS 4004291 4005250 . + 0 ID=CDS:Rv3563;Parent=transcript:Rv3563;protein_id=Rv3563 ### -Chromosome ena gene 4005247 4006203 . + . ID=gene:Rv3564;Name=fadE33;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE33;gene_id=Rv3564;logic_name=ena +Chromosome ena gene 4005247 4006203 . + . ID=gene:Rv3564;Name=fadE33;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE33;gene_id=Rv3564;logic_name=ena Chromosome ena mRNA 4005247 4006203 . + . ID=transcript:Rv3564;Parent=gene:Rv3564;Name=fadE33-1;biotype=protein_coding;transcript_id=Rv3564 Chromosome ena exon 4005247 4006203 . + . Parent=transcript:Rv3564;Name=Rv3564-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3564-1;rank=1 Chromosome ena CDS 4005247 4006203 . + 0 ID=CDS:Rv3564;Parent=transcript:Rv3564;protein_id=Rv3564 ### -Chromosome ena gene 4006200 4007366 . + . ID=gene:Rv3565;Name=aspB;biotype=protein_coding;description=Possible aspartate aminotransferase AspB (transaminase A) (ASPAT) (glutamic--oxaloacetic transaminase) (glutamic--aspartic transaminase);gene_id=Rv3565;logic_name=ena +Chromosome ena gene 4006200 4007366 . + . ID=gene:Rv3565;Name=aspB;biotype=protein_coding;description=Possible aspartate aminotransferase AspB (transaminase A) (ASPAT) (glutamic--oxaloacetic transaminase) (glutamic--aspartic transaminase);gene_id=Rv3565;logic_name=ena Chromosome ena mRNA 4006200 4007366 . + . ID=transcript:Rv3565;Parent=gene:Rv3565;Name=aspB-1;biotype=protein_coding;transcript_id=Rv3565 Chromosome ena exon 4006200 4007366 . + . Parent=transcript:Rv3565;Name=Rv3565-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3565-1;rank=1 Chromosome ena CDS 4006200 4007366 . + 0 ID=CDS:Rv3565;Parent=transcript:Rv3565;protein_id=Rv3565 ### -Chromosome ena gene 4007331 4008182 . - . ID=gene:Rv3566c;Name=nat;biotype=protein_coding;description=Arylamine N-acetyltransferase Nat (arylamine acetylase);gene_id=Rv3566c;logic_name=ena +Chromosome ena gene 4007331 4008182 . - . ID=gene:Rv3566c;Name=nat;biotype=protein_coding;description=Arylamine N-acetyltransferase Nat (arylamine acetylase);gene_id=Rv3566c;logic_name=ena Chromosome ena mRNA 4007331 4008182 . - . ID=transcript:Rv3566c;Parent=gene:Rv3566c;Name=nat-1;biotype=protein_coding;transcript_id=Rv3566c Chromosome ena exon 4007331 4008182 . - . Parent=transcript:Rv3566c;Name=Rv3566c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3566c-1;rank=1 Chromosome ena CDS 4007331 4008182 . - 0 ID=CDS:Rv3566c;Parent=transcript:Rv3566c;protein_id=Rv3566c ### -Chromosome ena gene 4008167 4008433 . - . ID=gene:Rv3566A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3566A;logic_name=ena +Chromosome ena gene 4008167 4008433 . - . ID=gene:Rv3566A;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3566A;logic_name=ena Chromosome ena mRNA 4008167 4008433 . - . ID=transcript:Rv3566A;Parent=gene:Rv3566A;biotype=protein_coding;transcript_id=Rv3566A Chromosome ena exon 4008167 4008433 . - . Parent=transcript:Rv3566A;Name=Rv3566A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3566A-1;rank=1 Chromosome ena CDS 4008167 4008433 . - 0 ID=CDS:Rv3566A;Parent=transcript:Rv3566A;protein_id=Rv3566A ### -Chromosome ena gene 4008719 4009282 . - . ID=gene:Rv3567c;Name=hsaB;biotype=protein_coding;description=Possible oxidoreductase. Possible 3-hydroxy-9%2C10-seconandrost-1%2C3%2C5(10)-triene-9%2C17-dione hydroxylase.;gene_id=Rv3567c;logic_name=ena +Chromosome ena gene 4008719 4009282 . - . ID=gene:Rv3567c;Name=hsaB;biotype=protein_coding;description=Possible oxidoreductase. Possible 3-hydroxy-9%2C10-seconandrost-1%2C3%2C5(10)-triene-9%2C17-dione hydroxylase.;gene_id=Rv3567c;logic_name=ena Chromosome ena mRNA 4008719 4009282 . - . ID=transcript:Rv3567c;Parent=gene:Rv3567c;Name=hsaB-1;biotype=protein_coding;transcript_id=Rv3567c Chromosome ena exon 4008719 4009282 . - . Parent=transcript:Rv3567c;Name=Rv3567c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3567c-1;rank=1 Chromosome ena CDS 4008719 4009282 . - 0 ID=CDS:Rv3567c;Parent=transcript:Rv3567c;protein_id=Rv3567c ### -Chromosome ena gene 4009297 4010199 . - . ID=gene:Rv3568c;Name=hsaC;biotype=protein_coding;description=3%2C4-DHSA dioxygenase;gene_id=Rv3568c;logic_name=ena +Chromosome ena gene 4009297 4010199 . - . ID=gene:Rv3568c;Name=hsaC;biotype=protein_coding;description=3%2C4-DHSA dioxygenase;gene_id=Rv3568c;logic_name=ena Chromosome ena mRNA 4009297 4010199 . - . ID=transcript:Rv3568c;Parent=gene:Rv3568c;Name=hsaC-1;biotype=protein_coding;transcript_id=Rv3568c Chromosome ena exon 4009297 4010199 . - . Parent=transcript:Rv3568c;Name=Rv3568c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3568c-1;rank=1 Chromosome ena CDS 4009297 4010199 . - 0 ID=CDS:Rv3568c;Parent=transcript:Rv3568c;protein_id=Rv3568c ### -Chromosome ena gene 4010196 4011071 . - . ID=gene:Rv3569c;Name=hsaD;biotype=protein_coding;description=4%2C9-DHSA hydrolase;gene_id=Rv3569c;logic_name=ena +Chromosome ena gene 4010196 4011071 . - . ID=gene:Rv3569c;Name=hsaD;biotype=protein_coding;description=4%2C9-DHSA hydrolase;gene_id=Rv3569c;logic_name=ena Chromosome ena mRNA 4010196 4011071 . - . ID=transcript:Rv3569c;Parent=gene:Rv3569c;Name=hsaD-1;biotype=protein_coding;transcript_id=Rv3569c Chromosome ena exon 4010196 4011071 . - . Parent=transcript:Rv3569c;Name=Rv3569c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3569c-1;rank=1 Chromosome ena CDS 4010196 4011071 . - 0 ID=CDS:Rv3569c;Parent=transcript:Rv3569c;protein_id=Rv3569c ### -Chromosome ena gene 4011086 4012270 . - . ID=gene:Rv3570c;Name=hsaA;biotype=protein_coding;description=Possible oxidoreductase. Possible 3-hydroxy-9%2C10-seconandrost-1%2C3%2C5(10)-triene-9%2C17-dione hydroxylase.;gene_id=Rv3570c;logic_name=ena +Chromosome ena gene 4011086 4012270 . - . ID=gene:Rv3570c;Name=hsaA;biotype=protein_coding;description=Possible oxidoreductase. Possible 3-hydroxy-9%2C10-seconandrost-1%2C3%2C5(10)-triene-9%2C17-dione hydroxylase.;gene_id=Rv3570c;logic_name=ena Chromosome ena mRNA 4011086 4012270 . - . ID=transcript:Rv3570c;Parent=gene:Rv3570c;Name=hsaA-1;biotype=protein_coding;transcript_id=Rv3570c Chromosome ena exon 4011086 4012270 . - . Parent=transcript:Rv3570c;Name=Rv3570c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3570c-1;rank=1 Chromosome ena CDS 4011086 4012270 . - 0 ID=CDS:Rv3570c;Parent=transcript:Rv3570c;protein_id=Rv3570c ### -Chromosome ena gene 4012417 4013493 . + . ID=gene:Rv3571;Name=kshB;biotype=protein_coding;description=Reductase component of 3-ketosteroid-9-alpha-hydroxylase KshB;gene_id=Rv3571;logic_name=ena +Chromosome ena gene 4012417 4013493 . + . ID=gene:Rv3571;Name=kshB;biotype=protein_coding;description=Reductase component of 3-ketosteroid-9-alpha-hydroxylase KshB;gene_id=Rv3571;logic_name=ena Chromosome ena mRNA 4012417 4013493 . + . ID=transcript:Rv3571;Parent=gene:Rv3571;Name=kshB-1;biotype=protein_coding;transcript_id=Rv3571 Chromosome ena exon 4012417 4013493 . + . Parent=transcript:Rv3571;Name=Rv3571-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3571-1;rank=1 Chromosome ena CDS 4012417 4013493 . + 0 ID=CDS:Rv3571;Parent=transcript:Rv3571;protein_id=Rv3571 ### -Chromosome ena gene 4013511 4014041 . + . ID=gene:Rv3572;biotype=protein_coding;description=Unknown protein;gene_id=Rv3572;logic_name=ena +Chromosome ena gene 4013511 4014041 . + . ID=gene:Rv3572;biotype=protein_coding;description=Unknown protein;gene_id=Rv3572;logic_name=ena Chromosome ena mRNA 4013511 4014041 . + . ID=transcript:Rv3572;Parent=gene:Rv3572;biotype=protein_coding;transcript_id=Rv3572 Chromosome ena exon 4013511 4014041 . + . Parent=transcript:Rv3572;Name=Rv3572-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3572-1;rank=1 Chromosome ena CDS 4013511 4014041 . + 0 ID=CDS:Rv3572;Parent=transcript:Rv3572;protein_id=Rv3572 ### -Chromosome ena gene 4014077 4016212 . - . ID=gene:Rv3573c;Name=fadE34;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE34;gene_id=Rv3573c;logic_name=ena +Chromosome ena gene 4014077 4016212 . - . ID=gene:Rv3573c;Name=fadE34;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE34;gene_id=Rv3573c;logic_name=ena Chromosome ena mRNA 4014077 4016212 . - . ID=transcript:Rv3573c;Parent=gene:Rv3573c;Name=fadE34-1;biotype=protein_coding;transcript_id=Rv3573c Chromosome ena exon 4014077 4016212 . - . Parent=transcript:Rv3573c;Name=Rv3573c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3573c-1;rank=1 Chromosome ena CDS 4014077 4016212 . - 0 ID=CDS:Rv3573c;Parent=transcript:Rv3573c;protein_id=Rv3573c ### -Chromosome ena gene 4016484 4017083 . + . ID=gene:Rv3574;Name=kstR;biotype=protein_coding;description=Transcriptional regulatory protein KstR (probably TetR-family);gene_id=Rv3574;logic_name=ena +Chromosome ena gene 4016484 4017083 . + . ID=gene:Rv3574;Name=kstR;biotype=protein_coding;description=Transcriptional regulatory protein KstR (probably TetR-family);gene_id=Rv3574;logic_name=ena Chromosome ena mRNA 4016484 4017083 . + . ID=transcript:Rv3574;Parent=gene:Rv3574;Name=kstR-1;biotype=protein_coding;transcript_id=Rv3574 Chromosome ena exon 4016484 4017083 . + . Parent=transcript:Rv3574;Name=Rv3574-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3574-1;rank=1 Chromosome ena CDS 4016484 4017083 . + 0 ID=CDS:Rv3574;Parent=transcript:Rv3574;protein_id=Rv3574 ### -Chromosome ena gene 4017089 4018168 . - . ID=gene:Rv3575c;biotype=protein_coding;description=Transcriptional regulatory protein (probably LacI-family);gene_id=Rv3575c;logic_name=ena +Chromosome ena gene 4017089 4018168 . - . ID=gene:Rv3575c;biotype=protein_coding;description=Transcriptional regulatory protein (probably LacI-family);gene_id=Rv3575c;logic_name=ena Chromosome ena mRNA 4017089 4018168 . - . ID=transcript:Rv3575c;Parent=gene:Rv3575c;biotype=protein_coding;transcript_id=Rv3575c Chromosome ena exon 4017089 4018168 . - . Parent=transcript:Rv3575c;Name=Rv3575c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3575c-1;rank=1 Chromosome ena CDS 4017089 4018168 . - 0 ID=CDS:Rv3575c;Parent=transcript:Rv3575c;protein_id=Rv3575c ### -Chromosome ena gene 4018358 4019071 . + . ID=gene:Rv3576;Name=lppH;biotype=protein_coding;description=Possible conserved lipoprotein LppH;gene_id=Rv3576;logic_name=ena +Chromosome ena gene 4018358 4019071 . + . ID=gene:Rv3576;Name=lppH;biotype=protein_coding;description=Possible conserved lipoprotein LppH;gene_id=Rv3576;logic_name=ena Chromosome ena mRNA 4018358 4019071 . + . ID=transcript:Rv3576;Parent=gene:Rv3576;Name=lppH-1;biotype=protein_coding;transcript_id=Rv3576 Chromosome ena exon 4018358 4019071 . + . Parent=transcript:Rv3576;Name=Rv3576-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3576-1;rank=1 Chromosome ena CDS 4018358 4019071 . + 0 ID=CDS:Rv3576;Parent=transcript:Rv3576;protein_id=Rv3576 ### -Chromosome ena gene 4019262 4020128 . + . ID=gene:Rv3577;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3577;logic_name=ena +Chromosome ena gene 4019262 4020128 . + . ID=gene:Rv3577;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3577;logic_name=ena Chromosome ena mRNA 4019262 4020128 . + . ID=transcript:Rv3577;Parent=gene:Rv3577;biotype=protein_coding;transcript_id=Rv3577 Chromosome ena exon 4019262 4020128 . + . Parent=transcript:Rv3577;Name=Rv3577-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3577-1;rank=1 Chromosome ena CDS 4019262 4020128 . + 0 ID=CDS:Rv3577;Parent=transcript:Rv3577;protein_id=Rv3577 ### -Chromosome ena gene 4020142 4021383 . + . ID=gene:Rv3578;Name=arsB2;biotype=protein_coding;description=Possible arsenical pump integral membrane protein ArsB2;gene_id=Rv3578;logic_name=ena +Chromosome ena gene 4020142 4021383 . + . ID=gene:Rv3578;Name=arsB2;biotype=protein_coding;description=Possible arsenical pump integral membrane protein ArsB2;gene_id=Rv3578;logic_name=ena Chromosome ena mRNA 4020142 4021383 . + . ID=transcript:Rv3578;Parent=gene:Rv3578;Name=arsB2-1;biotype=protein_coding;transcript_id=Rv3578 Chromosome ena exon 4020142 4021383 . + . Parent=transcript:Rv3578;Name=Rv3578-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3578-1;rank=1 Chromosome ena CDS 4020142 4021383 . + 0 ID=CDS:Rv3578;Parent=transcript:Rv3578;protein_id=Rv3578 ### -Chromosome ena gene 4021425 4022393 . - . ID=gene:Rv3579c;biotype=protein_coding;description=Possible tRNA/rRNA methyltransferase;gene_id=Rv3579c;logic_name=ena +Chromosome ena gene 4021425 4022393 . - . ID=gene:Rv3579c;biotype=protein_coding;description=Possible tRNA/rRNA methyltransferase;gene_id=Rv3579c;logic_name=ena Chromosome ena mRNA 4021425 4022393 . - . ID=transcript:Rv3579c;Parent=gene:Rv3579c;biotype=protein_coding;transcript_id=Rv3579c Chromosome ena exon 4021425 4022393 . - . Parent=transcript:Rv3579c;Name=Rv3579c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3579c-1;rank=1 Chromosome ena CDS 4021425 4022393 . - 0 ID=CDS:Rv3579c;Parent=transcript:Rv3579c;protein_id=Rv3579c ### -Chromosome ena gene 4022394 4023803 . - . ID=gene:Rv3580c;Name=cysS1;biotype=protein_coding;description=Cysteinyl-tRNA synthetase 1 CysS1 (cysteine--tRNA ligase 1) (CYSRS 1) (cysteine translase);gene_id=Rv3580c;logic_name=ena +Chromosome ena gene 4022394 4023803 . - . ID=gene:Rv3580c;Name=cysS1;biotype=protein_coding;description=Cysteinyl-tRNA synthetase 1 CysS1 (cysteine--tRNA ligase 1) (CYSRS 1) (cysteine translase);gene_id=Rv3580c;logic_name=ena Chromosome ena mRNA 4022394 4023803 . - . ID=transcript:Rv3580c;Parent=gene:Rv3580c;Name=cysS1-1;biotype=protein_coding;transcript_id=Rv3580c Chromosome ena exon 4022394 4023803 . - . Parent=transcript:Rv3580c;Name=Rv3580c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3580c-1;rank=1 Chromosome ena CDS 4022394 4023803 . - 0 ID=CDS:Rv3580c;Parent=transcript:Rv3580c;protein_id=Rv3580c ### -Chromosome ena gene 4023868 4024347 . - . ID=gene:Rv3581c;Name=ispF;biotype=protein_coding;description=Probable 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase IspF (MECPS);gene_id=Rv3581c;logic_name=ena +Chromosome ena gene 4023868 4024347 . - . ID=gene:Rv3581c;Name=ispF;biotype=protein_coding;description=Probable 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase IspF (MECPS);gene_id=Rv3581c;logic_name=ena Chromosome ena mRNA 4023868 4024347 . - . ID=transcript:Rv3581c;Parent=gene:Rv3581c;Name=ispF-1;biotype=protein_coding;transcript_id=Rv3581c Chromosome ena exon 4023868 4024347 . - . Parent=transcript:Rv3581c;Name=Rv3581c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3581c-1;rank=1 Chromosome ena CDS 4023868 4024347 . - 0 ID=CDS:Rv3581c;Parent=transcript:Rv3581c;protein_id=Rv3581c ### -Chromosome ena gene 4024344 4025039 . - . ID=gene:Rv3582c;Name=ispD;biotype=protein_coding;description=4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD (MEP cytidylyltransferase) (MCT);gene_id=Rv3582c;logic_name=ena +Chromosome ena gene 4024344 4025039 . - . ID=gene:Rv3582c;Name=ispD;biotype=protein_coding;description=4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD (MEP cytidylyltransferase) (MCT);gene_id=Rv3582c;logic_name=ena Chromosome ena mRNA 4024344 4025039 . - . ID=transcript:Rv3582c;Parent=gene:Rv3582c;Name=ispD-1;biotype=protein_coding;transcript_id=Rv3582c Chromosome ena exon 4024344 4025039 . - . Parent=transcript:Rv3582c;Name=Rv3582c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3582c-1;rank=1 Chromosome ena CDS 4024344 4025039 . - 0 ID=CDS:Rv3582c;Parent=transcript:Rv3582c;protein_id=Rv3582c ### -Chromosome ena gene 4025056 4025544 . - . ID=gene:Rv3583c;biotype=protein_coding;description=Possible transcription factor;gene_id=Rv3583c;logic_name=ena +Chromosome ena gene 4025056 4025544 . - . ID=gene:Rv3583c;biotype=protein_coding;description=Possible transcription factor;gene_id=Rv3583c;logic_name=ena Chromosome ena mRNA 4025056 4025544 . - . ID=transcript:Rv3583c;Parent=gene:Rv3583c;biotype=protein_coding;transcript_id=Rv3583c Chromosome ena exon 4025056 4025544 . - . Parent=transcript:Rv3583c;Name=Rv3583c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3583c-1;rank=1 Chromosome ena CDS 4025056 4025544 . - 0 ID=CDS:Rv3583c;Parent=transcript:Rv3583c;protein_id=Rv3583c ### -Chromosome ena gene 4025830 4026378 . + . ID=gene:Rv3584;Name=lpqE;biotype=protein_coding;description=Possible conserved lipoprotein LpqE;gene_id=Rv3584;logic_name=ena +Chromosome ena gene 4025830 4026378 . + . ID=gene:Rv3584;Name=lpqE;biotype=protein_coding;description=Possible conserved lipoprotein LpqE;gene_id=Rv3584;logic_name=ena Chromosome ena mRNA 4025830 4026378 . + . ID=transcript:Rv3584;Parent=gene:Rv3584;Name=lpqE-1;biotype=protein_coding;transcript_id=Rv3584 Chromosome ena exon 4025830 4026378 . + . Parent=transcript:Rv3584;Name=Rv3584-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3584-1;rank=1 Chromosome ena CDS 4025830 4026378 . + 0 ID=CDS:Rv3584;Parent=transcript:Rv3584;protein_id=Rv3584 ### -Chromosome ena gene 4026444 4027886 . + . ID=gene:Rv3585;Name=radA;biotype=protein_coding;description=DNA repair protein RadA (DNA repair protein SMS);gene_id=Rv3585;logic_name=ena +Chromosome ena gene 4026444 4027886 . + . ID=gene:Rv3585;Name=radA;biotype=protein_coding;description=DNA repair protein RadA (DNA repair protein SMS);gene_id=Rv3585;logic_name=ena Chromosome ena mRNA 4026444 4027886 . + . ID=transcript:Rv3585;Parent=gene:Rv3585;Name=radA-1;biotype=protein_coding;transcript_id=Rv3585 Chromosome ena exon 4026444 4027886 . + . Parent=transcript:Rv3585;Name=Rv3585-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3585-1;rank=1 Chromosome ena CDS 4026444 4027886 . + 0 ID=CDS:Rv3585;Parent=transcript:Rv3585;protein_id=Rv3585 ### -Chromosome ena gene 4027891 4028967 . + . ID=gene:Rv3586;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3586;logic_name=ena +Chromosome ena gene 4027891 4028967 . + . ID=gene:Rv3586;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3586;logic_name=ena Chromosome ena mRNA 4027891 4028967 . + . ID=transcript:Rv3586;Parent=gene:Rv3586;biotype=protein_coding;transcript_id=Rv3586 Chromosome ena exon 4027891 4028967 . + . Parent=transcript:Rv3586;Name=Rv3586-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3586-1;rank=1 Chromosome ena CDS 4027891 4028967 . + 0 ID=CDS:Rv3586;Parent=transcript:Rv3586;protein_id=Rv3586 ### -Chromosome ena gene 4028968 4029762 . - . ID=gene:Rv3587c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3587c;logic_name=ena +Chromosome ena gene 4028968 4029762 . - . ID=gene:Rv3587c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3587c;logic_name=ena Chromosome ena mRNA 4028968 4029762 . - . ID=transcript:Rv3587c;Parent=gene:Rv3587c;biotype=protein_coding;transcript_id=Rv3587c Chromosome ena exon 4028968 4029762 . - . Parent=transcript:Rv3587c;Name=Rv3587c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3587c-1;rank=1 Chromosome ena CDS 4028968 4029762 . - 0 ID=CDS:Rv3587c;Parent=transcript:Rv3587c;protein_id=Rv3587c ### -Chromosome ena gene 4029871 4030494 . - . ID=gene:Rv3588c;Name=canB;biotype=protein_coding;description=Beta-carbonic anhydrase CanB;gene_id=Rv3588c;logic_name=ena +Chromosome ena gene 4029871 4030494 . - . ID=gene:Rv3588c;Name=canB;biotype=protein_coding;description=Beta-carbonic anhydrase CanB;gene_id=Rv3588c;logic_name=ena Chromosome ena mRNA 4029871 4030494 . - . ID=transcript:Rv3588c;Parent=gene:Rv3588c;Name=canB-1;biotype=protein_coding;transcript_id=Rv3588c Chromosome ena exon 4029871 4030494 . - . Parent=transcript:Rv3588c;Name=Rv3588c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3588c-1;rank=1 Chromosome ena CDS 4029871 4030494 . - 0 ID=CDS:Rv3588c;Parent=transcript:Rv3588c;protein_id=Rv3588c ### -Chromosome ena gene 4030493 4031407 . + . ID=gene:Rv3589;Name=mutY;biotype=protein_coding;description=Probable adenine glycosylase MutY;gene_id=Rv3589;logic_name=ena +Chromosome ena gene 4030493 4031407 . + . ID=gene:Rv3589;Name=mutY;biotype=protein_coding;description=Probable adenine glycosylase MutY;gene_id=Rv3589;logic_name=ena Chromosome ena mRNA 4030493 4031407 . + . ID=transcript:Rv3589;Parent=gene:Rv3589;Name=mutY-1;biotype=protein_coding;transcript_id=Rv3589 Chromosome ena exon 4030493 4031407 . + . Parent=transcript:Rv3589;Name=Rv3589-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3589-1;rank=1 Chromosome ena CDS 4030493 4031407 . + 0 ID=CDS:Rv3589;Parent=transcript:Rv3589;protein_id=Rv3589 ### -Chromosome ena gene 4031404 4033158 . - . ID=gene:Rv3590c;Name=PE_PGRS58;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS58;gene_id=Rv3590c;logic_name=ena +Chromosome ena gene 4031404 4033158 . - . ID=gene:Rv3590c;Name=PE_PGRS58;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS58;gene_id=Rv3590c;logic_name=ena Chromosome ena mRNA 4031404 4033158 . - . ID=transcript:Rv3590c;Parent=gene:Rv3590c;Name=PE_PGRS58-1;biotype=protein_coding;transcript_id=Rv3590c Chromosome ena exon 4031404 4033158 . - . Parent=transcript:Rv3590c;Name=Rv3590c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3590c-1;rank=1 Chromosome ena CDS 4031404 4033158 . - 0 ID=CDS:Rv3590c;Parent=transcript:Rv3590c;protein_id=Rv3590c ### -Chromosome ena gene 4033269 4034042 . - . ID=gene:Rv3591c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3591c;logic_name=ena +Chromosome ena gene 4033269 4034042 . - . ID=gene:Rv3591c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3591c;logic_name=ena Chromosome ena mRNA 4033269 4034042 . - . ID=transcript:Rv3591c;Parent=gene:Rv3591c;biotype=protein_coding;transcript_id=Rv3591c Chromosome ena exon 4033269 4034042 . - . Parent=transcript:Rv3591c;Name=Rv3591c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3591c-1;rank=1 Chromosome ena CDS 4033269 4034042 . - 0 ID=CDS:Rv3591c;Parent=transcript:Rv3591c;protein_id=Rv3591c ### -Chromosome ena gene 4034057 4034374 . + . ID=gene:Rv3592;Name=mhuD;biotype=protein_coding;description=Possible heme degrading protein MhuD;gene_id=Rv3592;logic_name=ena +Chromosome ena gene 4034057 4034374 . + . ID=gene:Rv3592;Name=mhuD;biotype=protein_coding;description=Possible heme degrading protein MhuD;gene_id=Rv3592;logic_name=ena Chromosome ena mRNA 4034057 4034374 . + . ID=transcript:Rv3592;Parent=gene:Rv3592;Name=mhuD-1;biotype=protein_coding;transcript_id=Rv3592 Chromosome ena exon 4034057 4034374 . + . Parent=transcript:Rv3592;Name=Rv3592-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3592-1;rank=1 Chromosome ena CDS 4034057 4034374 . + 0 ID=CDS:Rv3592;Parent=transcript:Rv3592;protein_id=Rv3592 ### -Chromosome ena gene 4034352 4035710 . + . ID=gene:Rv3593;Name=lpqF;biotype=protein_coding;description=Probable conserved lipoprotein LpqF;gene_id=Rv3593;logic_name=ena +Chromosome ena gene 4034352 4035710 . + . ID=gene:Rv3593;Name=lpqF;biotype=protein_coding;description=Probable conserved lipoprotein LpqF;gene_id=Rv3593;logic_name=ena Chromosome ena mRNA 4034352 4035710 . + . ID=transcript:Rv3593;Parent=gene:Rv3593;Name=lpqF-1;biotype=protein_coding;transcript_id=Rv3593 Chromosome ena exon 4034352 4035710 . + . Parent=transcript:Rv3593;Name=Rv3593-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3593-1;rank=1 Chromosome ena CDS 4034352 4035710 . + 0 ID=CDS:Rv3593;Parent=transcript:Rv3593;protein_id=Rv3593 ### -Chromosome ena gene 4035857 4036684 . + . ID=gene:Rv3594;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3594;logic_name=ena +Chromosome ena gene 4035857 4036684 . + . ID=gene:Rv3594;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3594;logic_name=ena Chromosome ena mRNA 4035857 4036684 . + . ID=transcript:Rv3594;Parent=gene:Rv3594;biotype=protein_coding;transcript_id=Rv3594 Chromosome ena exon 4035857 4036684 . + . Parent=transcript:Rv3594;Name=Rv3594-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3594-1;rank=1 Chromosome ena CDS 4035857 4036684 . + 0 ID=CDS:Rv3594;Parent=transcript:Rv3594;protein_id=Rv3594 ### -Chromosome ena gene 4036731 4038050 . - . ID=gene:Rv3595c;Name=PE_PGRS59;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS59;gene_id=Rv3595c;logic_name=ena +Chromosome ena gene 4036731 4038050 . - . ID=gene:Rv3595c;Name=PE_PGRS59;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS59;gene_id=Rv3595c;logic_name=ena Chromosome ena mRNA 4036731 4038050 . - . ID=transcript:Rv3595c;Parent=gene:Rv3595c;Name=PE_PGRS59-1;biotype=protein_coding;transcript_id=Rv3595c Chromosome ena exon 4036731 4038050 . - . Parent=transcript:Rv3595c;Name=Rv3595c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3595c-1;rank=1 Chromosome ena CDS 4036731 4038050 . - 0 ID=CDS:Rv3595c;Parent=transcript:Rv3595c;protein_id=Rv3595c ### -Chromosome ena gene 4038158 4040704 . - . ID=gene:Rv3596c;Name=clpC1;biotype=protein_coding;description=Probable ATP-dependent protease ATP-binding subunit ClpC1;gene_id=Rv3596c;logic_name=ena +Chromosome ena gene 4038158 4040704 . - . ID=gene:Rv3596c;Name=clpC1;biotype=protein_coding;description=Probable ATP-dependent protease ATP-binding subunit ClpC1;gene_id=Rv3596c;logic_name=ena Chromosome ena mRNA 4038158 4040704 . - . ID=transcript:Rv3596c;Parent=gene:Rv3596c;Name=clpC1-1;biotype=protein_coding;transcript_id=Rv3596c Chromosome ena exon 4038158 4040704 . - . Parent=transcript:Rv3596c;Name=Rv3596c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3596c-1;rank=1 Chromosome ena CDS 4038158 4040704 . - 0 ID=CDS:Rv3596c;Parent=transcript:Rv3596c;protein_id=Rv3596c @@ -18861,239 +18861,239 @@ Chromosome ena transcript 4040879 4040938 . + . ID=transcript:EBG00000313367;Par Chromosome ena exon 4040879 4040938 . + . Parent=transcript:EBG00000313367;Name=EBG00000313367;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313367;rank=1 ### Chromosome ena_gene biological_region 4040879 4040938 . + . external_name=AL123456.3:gene:4040879..4040938;logic_name=ena_gene -Chromosome ena gene 4040981 4041319 . - . ID=gene:Rv3597c;Name=lsr2;biotype=protein_coding;description=Iron-regulated H-NS-like protein Lsr2;gene_id=Rv3597c;logic_name=ena +Chromosome ena gene 4040981 4041319 . - . ID=gene:Rv3597c;Name=lsr2;biotype=protein_coding;description=Iron-regulated H-NS-like protein Lsr2;gene_id=Rv3597c;logic_name=ena Chromosome ena mRNA 4040981 4041319 . - . ID=transcript:Rv3597c;Parent=gene:Rv3597c;Name=lsr2-1;biotype=protein_coding;transcript_id=Rv3597c Chromosome ena exon 4040981 4041319 . - . Parent=transcript:Rv3597c;Name=Rv3597c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3597c-1;rank=1 Chromosome ena CDS 4040981 4041319 . - 0 ID=CDS:Rv3597c;Parent=transcript:Rv3597c;protein_id=Rv3597c ### -Chromosome ena gene 4041423 4042940 . - . ID=gene:Rv3598c;Name=lysS;biotype=protein_coding;description=Lysyl-tRNA synthetase 1 LysS (lysine--tRNA ligase 1) (LysRS 1) (lysine translase);gene_id=Rv3598c;logic_name=ena +Chromosome ena gene 4041423 4042940 . - . ID=gene:Rv3598c;Name=lysS;biotype=protein_coding;description=Lysyl-tRNA synthetase 1 LysS (lysine--tRNA ligase 1) (LysRS 1) (lysine translase);gene_id=Rv3598c;logic_name=ena Chromosome ena mRNA 4041423 4042940 . - . ID=transcript:Rv3598c;Parent=gene:Rv3598c;Name=lysS-1;biotype=protein_coding;transcript_id=Rv3598c Chromosome ena exon 4041423 4042940 . - . Parent=transcript:Rv3598c;Name=Rv3598c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3598c-1;rank=1 Chromosome ena CDS 4041423 4042940 . - 0 ID=CDS:Rv3598c;Parent=transcript:Rv3598c;protein_id=Rv3598c ### -Chromosome ena gene 4042952 4043035 . - . ID=gene:Rv3599c;biotype=protein_coding;description=Hypothetical short protein;gene_id=Rv3599c;logic_name=ena +Chromosome ena gene 4042952 4043035 . - . ID=gene:Rv3599c;biotype=protein_coding;description=Hypothetical short protein;gene_id=Rv3599c;logic_name=ena Chromosome ena mRNA 4042952 4043035 . - . ID=transcript:Rv3599c;Parent=gene:Rv3599c;biotype=protein_coding;transcript_id=Rv3599c Chromosome ena exon 4042952 4043035 . - . Parent=transcript:Rv3599c;Name=Rv3599c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3599c-1;rank=1 Chromosome ena CDS 4042952 4043035 . - 0 ID=CDS:Rv3599c;Parent=transcript:Rv3599c;protein_id=Rv3599c ### -Chromosome ena gene 4043041 4043859 . - . ID=gene:Rv3600c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3600c;logic_name=ena +Chromosome ena gene 4043041 4043859 . - . ID=gene:Rv3600c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3600c;logic_name=ena Chromosome ena mRNA 4043041 4043859 . - . ID=transcript:Rv3600c;Parent=gene:Rv3600c;biotype=protein_coding;transcript_id=Rv3600c Chromosome ena exon 4043041 4043859 . - . Parent=transcript:Rv3600c;Name=Rv3600c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3600c-1;rank=1 Chromosome ena CDS 4043041 4043859 . - 0 ID=CDS:Rv3600c;Parent=transcript:Rv3600c;protein_id=Rv3600c ### -Chromosome ena gene 4043862 4044281 . - . ID=gene:Rv3601c;Name=panD;biotype=protein_coding;description=Probable aspartate 1-decarboxylase precursor PanD (aspartate alpha-decarboxylase);gene_id=Rv3601c;logic_name=ena +Chromosome ena gene 4043862 4044281 . - . ID=gene:Rv3601c;Name=panD;biotype=protein_coding;description=Probable aspartate 1-decarboxylase precursor PanD (aspartate alpha-decarboxylase);gene_id=Rv3601c;logic_name=ena Chromosome ena mRNA 4043862 4044281 . - . ID=transcript:Rv3601c;Parent=gene:Rv3601c;Name=panD-1;biotype=protein_coding;transcript_id=Rv3601c Chromosome ena exon 4043862 4044281 . - . Parent=transcript:Rv3601c;Name=Rv3601c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3601c-1;rank=1 Chromosome ena CDS 4043862 4044281 . - 0 ID=CDS:Rv3601c;Parent=transcript:Rv3601c;protein_id=Rv3601c ### -Chromosome ena gene 4044281 4045210 . - . ID=gene:Rv3602c;Name=panC;biotype=protein_coding;description=Pantoate--beta-alanine ligase PanC (pantothenate synthetase) (pantoate activating enzyme);gene_id=Rv3602c;logic_name=ena +Chromosome ena gene 4044281 4045210 . - . ID=gene:Rv3602c;Name=panC;biotype=protein_coding;description=Pantoate--beta-alanine ligase PanC (pantothenate synthetase) (pantoate activating enzyme);gene_id=Rv3602c;logic_name=ena Chromosome ena mRNA 4044281 4045210 . - . ID=transcript:Rv3602c;Parent=gene:Rv3602c;Name=panC-1;biotype=protein_coding;transcript_id=Rv3602c Chromosome ena exon 4044281 4045210 . - . Parent=transcript:Rv3602c;Name=Rv3602c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3602c-1;rank=1 Chromosome ena CDS 4044281 4045210 . - 0 ID=CDS:Rv3602c;Parent=transcript:Rv3602c;protein_id=Rv3602c ### -Chromosome ena gene 4045207 4046118 . - . ID=gene:Rv3603c;biotype=protein_coding;description=Conserved hypothetical alanine and leucine rich protein;gene_id=Rv3603c;logic_name=ena +Chromosome ena gene 4045207 4046118 . - . ID=gene:Rv3603c;biotype=protein_coding;description=Conserved hypothetical alanine and leucine rich protein;gene_id=Rv3603c;logic_name=ena Chromosome ena mRNA 4045207 4046118 . - . ID=transcript:Rv3603c;Parent=gene:Rv3603c;biotype=protein_coding;transcript_id=Rv3603c Chromosome ena exon 4045207 4046118 . - . Parent=transcript:Rv3603c;Name=Rv3603c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3603c-1;rank=1 Chromosome ena CDS 4045207 4046118 . - 0 ID=CDS:Rv3603c;Parent=transcript:Rv3603c;protein_id=Rv3603c ### -Chromosome ena gene 4046303 4047496 . - . ID=gene:Rv3604c;biotype=protein_coding;description=Probable conserved transmembrane protein rich in alanine and arginine and proline;gene_id=Rv3604c;logic_name=ena +Chromosome ena gene 4046303 4047496 . - . ID=gene:Rv3604c;biotype=protein_coding;description=Probable conserved transmembrane protein rich in alanine and arginine and proline;gene_id=Rv3604c;logic_name=ena Chromosome ena mRNA 4046303 4047496 . - . ID=transcript:Rv3604c;Parent=gene:Rv3604c;biotype=protein_coding;transcript_id=Rv3604c Chromosome ena exon 4046303 4047496 . - . Parent=transcript:Rv3604c;Name=Rv3604c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3604c-1;rank=1 Chromosome ena CDS 4046303 4047496 . - 0 ID=CDS:Rv3604c;Parent=transcript:Rv3604c;protein_id=Rv3604c ### -Chromosome ena gene 4047705 4048181 . - . ID=gene:Rv3605c;biotype=protein_coding;description=Probable conserved secreted protein;gene_id=Rv3605c;logic_name=ena +Chromosome ena gene 4047705 4048181 . - . ID=gene:Rv3605c;biotype=protein_coding;description=Probable conserved secreted protein;gene_id=Rv3605c;logic_name=ena Chromosome ena mRNA 4047705 4048181 . - . ID=transcript:Rv3605c;Parent=gene:Rv3605c;biotype=protein_coding;transcript_id=Rv3605c Chromosome ena exon 4047705 4048181 . - . Parent=transcript:Rv3605c;Name=Rv3605c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3605c-1;rank=1 Chromosome ena CDS 4047705 4048181 . - 0 ID=CDS:Rv3605c;Parent=transcript:Rv3605c;protein_id=Rv3605c ### -Chromosome ena gene 4048181 4048747 . - . ID=gene:Rv3606c;Name=folK;biotype=protein_coding;description=2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase FolK (7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7%2C8-dihydropterin pyrophosphokinase) (PPPK) (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase) (7%2C8-dihydro-6-hydroxymethylpterin-diphosphokinase) (6-hydroxymethyl-7%2C8-dihydropterin diphosphokinase);gene_id=Rv3606c;logic_name=ena +Chromosome ena gene 4048181 4048747 . - . ID=gene:Rv3606c;Name=folK;biotype=protein_coding;description=2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase FolK (7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7%2C8-dihydropterin pyrophosphokinase) (PPPK) (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase) (7%2C8-dihydro-6-hydroxymethylpterin-diphosphokinase) (6-hydroxymethyl-7%2C8-dihydropterin diphosphokinase);gene_id=Rv3606c;logic_name=ena Chromosome ena mRNA 4048181 4048747 . - . ID=transcript:Rv3606c;Parent=gene:Rv3606c;Name=folK-1;biotype=protein_coding;transcript_id=Rv3606c Chromosome ena exon 4048181 4048747 . - . Parent=transcript:Rv3606c;Name=Rv3606c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3606c-1;rank=1 Chromosome ena CDS 4048181 4048747 . - 0 ID=CDS:Rv3606c;Parent=transcript:Rv3606c;protein_id=Rv3606c ### -Chromosome ena gene 4048744 4049145 . - . ID=gene:Rv3607c;Name=folB;biotype=protein_coding;description=Probable dihydroneopterin aldolase FolB (DHNA);gene_id=Rv3607c;logic_name=ena +Chromosome ena gene 4048744 4049145 . - . ID=gene:Rv3607c;Name=folB;biotype=protein_coding;description=Probable dihydroneopterin aldolase FolB (DHNA);gene_id=Rv3607c;logic_name=ena Chromosome ena mRNA 4048744 4049145 . - . ID=transcript:Rv3607c;Parent=gene:Rv3607c;Name=folB-1;biotype=protein_coding;transcript_id=Rv3607c Chromosome ena exon 4048744 4049145 . - . Parent=transcript:Rv3607c;Name=Rv3607c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3607c-1;rank=1 Chromosome ena CDS 4048744 4049145 . - 0 ID=CDS:Rv3607c;Parent=transcript:Rv3607c;protein_id=Rv3607c ### -Chromosome ena gene 4049138 4049980 . - . ID=gene:Rv3608c;Name=folP1;biotype=protein_coding;description=Dihydropteroate synthase 1 FolP (DHPS 1) (dihydropteroate pyrophosphorylase 1) (dihydropteroate diphosphorylase 1);gene_id=Rv3608c;logic_name=ena +Chromosome ena gene 4049138 4049980 . - . ID=gene:Rv3608c;Name=folP1;biotype=protein_coding;description=Dihydropteroate synthase 1 FolP (DHPS 1) (dihydropteroate pyrophosphorylase 1) (dihydropteroate diphosphorylase 1);gene_id=Rv3608c;logic_name=ena Chromosome ena mRNA 4049138 4049980 . - . ID=transcript:Rv3608c;Parent=gene:Rv3608c;Name=folP1-1;biotype=protein_coding;transcript_id=Rv3608c Chromosome ena exon 4049138 4049980 . - . Parent=transcript:Rv3608c;Name=Rv3608c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3608c-1;rank=1 Chromosome ena CDS 4049138 4049980 . - 0 ID=CDS:Rv3608c;Parent=transcript:Rv3608c;protein_id=Rv3608c ### -Chromosome ena gene 4049977 4050585 . - . ID=gene:Rv3609c;Name=folE;biotype=protein_coding;description=GTP cyclohydrolase I FolE (GTP-ch-I);gene_id=Rv3609c;logic_name=ena +Chromosome ena gene 4049977 4050585 . - . ID=gene:Rv3609c;Name=folE;biotype=protein_coding;description=GTP cyclohydrolase I FolE (GTP-ch-I);gene_id=Rv3609c;logic_name=ena Chromosome ena mRNA 4049977 4050585 . - . ID=transcript:Rv3609c;Parent=gene:Rv3609c;Name=folE-1;biotype=protein_coding;transcript_id=Rv3609c Chromosome ena exon 4049977 4050585 . - . Parent=transcript:Rv3609c;Name=Rv3609c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3609c-1;rank=1 Chromosome ena CDS 4049977 4050585 . - 0 ID=CDS:Rv3609c;Parent=transcript:Rv3609c;protein_id=Rv3609c ### -Chromosome ena gene 4050601 4052883 . - . ID=gene:Rv3610c;Name=ftsH;biotype=protein_coding;description=Membrane-bound protease FtsH (cell division protein);gene_id=Rv3610c;logic_name=ena +Chromosome ena gene 4050601 4052883 . - . ID=gene:Rv3610c;Name=ftsH;biotype=protein_coding;description=Membrane-bound protease FtsH (cell division protein);gene_id=Rv3610c;logic_name=ena Chromosome ena mRNA 4050601 4052883 . - . ID=transcript:Rv3610c;Parent=gene:Rv3610c;Name=ftsH-1;biotype=protein_coding;transcript_id=Rv3610c Chromosome ena exon 4050601 4052883 . - . Parent=transcript:Rv3610c;Name=Rv3610c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3610c-1;rank=1 Chromosome ena CDS 4050601 4052883 . - 0 ID=CDS:Rv3610c;Parent=transcript:Rv3610c;protein_id=Rv3610c ### -Chromosome ena gene 4052950 4053603 . + . ID=gene:Rv3611;biotype=protein_coding;description=Hypothetical arginine and proline rich protein;gene_id=Rv3611;logic_name=ena +Chromosome ena gene 4052950 4053603 . + . ID=gene:Rv3611;biotype=protein_coding;description=Hypothetical arginine and proline rich protein;gene_id=Rv3611;logic_name=ena Chromosome ena mRNA 4052950 4053603 . + . ID=transcript:Rv3611;Parent=gene:Rv3611;biotype=protein_coding;transcript_id=Rv3611 Chromosome ena exon 4052950 4053603 . + . Parent=transcript:Rv3611;Name=Rv3611-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3611-1;rank=1 Chromosome ena CDS 4052950 4053603 . + 0 ID=CDS:Rv3611;Parent=transcript:Rv3611;protein_id=Rv3611 ### -Chromosome ena gene 4053518 4053847 . - . ID=gene:Rv3612c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3612c;logic_name=ena +Chromosome ena gene 4053518 4053847 . - . ID=gene:Rv3612c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3612c;logic_name=ena Chromosome ena mRNA 4053518 4053847 . - . ID=transcript:Rv3612c;Parent=gene:Rv3612c;biotype=protein_coding;transcript_id=Rv3612c Chromosome ena exon 4053518 4053847 . - . Parent=transcript:Rv3612c;Name=Rv3612c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3612c-1;rank=1 Chromosome ena CDS 4053518 4053847 . - 0 ID=CDS:Rv3612c;Parent=transcript:Rv3612c;protein_id=Rv3612c ### -Chromosome ena gene 4053881 4054042 . - . ID=gene:Rv3613c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3613c;logic_name=ena +Chromosome ena gene 4053881 4054042 . - . ID=gene:Rv3613c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3613c;logic_name=ena Chromosome ena mRNA 4053881 4054042 . - . ID=transcript:Rv3613c;Parent=gene:Rv3613c;biotype=protein_coding;transcript_id=Rv3613c Chromosome ena exon 4053881 4054042 . - . Parent=transcript:Rv3613c;Name=Rv3613c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3613c-1;rank=1 Chromosome ena CDS 4053881 4054042 . - 0 ID=CDS:Rv3613c;Parent=transcript:Rv3613c;protein_id=Rv3613c ### -Chromosome ena gene 4054142 4054696 . - . ID=gene:Rv3614c;Name=espD;biotype=protein_coding;description=ESX-1 secretion-associated protein EspD;gene_id=Rv3614c;logic_name=ena +Chromosome ena gene 4054142 4054696 . - . ID=gene:Rv3614c;Name=espD;biotype=protein_coding;description=ESX-1 secretion-associated protein EspD;gene_id=Rv3614c;logic_name=ena Chromosome ena mRNA 4054142 4054696 . - . ID=transcript:Rv3614c;Parent=gene:Rv3614c;Name=espD-1;biotype=protein_coding;transcript_id=Rv3614c Chromosome ena exon 4054142 4054696 . - . Parent=transcript:Rv3614c;Name=Rv3614c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3614c-1;rank=1 Chromosome ena CDS 4054142 4054696 . - 0 ID=CDS:Rv3614c;Parent=transcript:Rv3614c;protein_id=Rv3614c ### -Chromosome ena gene 4054812 4055123 . - . ID=gene:Rv3615c;Name=espC;biotype=protein_coding;description=ESX-1 secretion-associated protein EspC;gene_id=Rv3615c;logic_name=ena +Chromosome ena gene 4054812 4055123 . - . ID=gene:Rv3615c;Name=espC;biotype=protein_coding;description=ESX-1 secretion-associated protein EspC;gene_id=Rv3615c;logic_name=ena Chromosome ena mRNA 4054812 4055123 . - . ID=transcript:Rv3615c;Parent=gene:Rv3615c;Name=espC-1;biotype=protein_coding;transcript_id=Rv3615c Chromosome ena exon 4054812 4055123 . - . Parent=transcript:Rv3615c;Name=Rv3615c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3615c-1;rank=1 Chromosome ena CDS 4054812 4055123 . - 0 ID=CDS:Rv3615c;Parent=transcript:Rv3615c;protein_id=Rv3615c ### -Chromosome ena gene 4055197 4056375 . - . ID=gene:Rv3616c;Name=espA;biotype=protein_coding;description=ESX-1 secretion-associated protein A%2C EspA;gene_id=Rv3616c;logic_name=ena +Chromosome ena gene 4055197 4056375 . - . ID=gene:Rv3616c;Name=espA;biotype=protein_coding;description=ESX-1 secretion-associated protein A%2C EspA;gene_id=Rv3616c;logic_name=ena Chromosome ena mRNA 4055197 4056375 . - . ID=transcript:Rv3616c;Parent=gene:Rv3616c;Name=espA-1;biotype=protein_coding;transcript_id=Rv3616c Chromosome ena exon 4055197 4056375 . - . Parent=transcript:Rv3616c;Name=Rv3616c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3616c-1;rank=1 Chromosome ena CDS 4055197 4056375 . - 0 ID=CDS:Rv3616c;Parent=transcript:Rv3616c;protein_id=Rv3616c ### -Chromosome ena gene 4057733 4058701 . + . ID=gene:Rv3617;Name=ephA;biotype=protein_coding;description=Probable epoxide hydrolase EphA (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3617;logic_name=ena +Chromosome ena gene 4057733 4058701 . + . ID=gene:Rv3617;Name=ephA;biotype=protein_coding;description=Probable epoxide hydrolase EphA (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3617;logic_name=ena Chromosome ena mRNA 4057733 4058701 . + . ID=transcript:Rv3617;Parent=gene:Rv3617;Name=ephA-1;biotype=protein_coding;transcript_id=Rv3617 Chromosome ena exon 4057733 4058701 . + . Parent=transcript:Rv3617;Name=Rv3617-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3617-1;rank=1 Chromosome ena CDS 4057733 4058701 . + 0 ID=CDS:Rv3617;Parent=transcript:Rv3617;protein_id=Rv3617 ### -Chromosome ena gene 4058698 4059885 . + . ID=gene:Rv3618;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv3618;logic_name=ena +Chromosome ena gene 4058698 4059885 . + . ID=gene:Rv3618;biotype=protein_coding;description=Possible monooxygenase;gene_id=Rv3618;logic_name=ena Chromosome ena mRNA 4058698 4059885 . + . ID=transcript:Rv3618;Parent=gene:Rv3618;biotype=protein_coding;transcript_id=Rv3618 Chromosome ena exon 4058698 4059885 . + . Parent=transcript:Rv3618;Name=Rv3618-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3618-1;rank=1 Chromosome ena CDS 4058698 4059885 . + 0 ID=CDS:Rv3618;Parent=transcript:Rv3618;protein_id=Rv3618 ### -Chromosome ena gene 4059984 4060268 . - . ID=gene:Rv3619c;Name=esxV;biotype=protein_coding;description=Putative ESAT-6 like protein EsxV (ESAT-6 like protein 1);gene_id=Rv3619c;logic_name=ena +Chromosome ena gene 4059984 4060268 . - . ID=gene:Rv3619c;Name=esxV;biotype=protein_coding;description=Putative ESAT-6 like protein EsxV (ESAT-6 like protein 1);gene_id=Rv3619c;logic_name=ena Chromosome ena mRNA 4059984 4060268 . - . ID=transcript:Rv3619c;Parent=gene:Rv3619c;Name=esxV-1;biotype=protein_coding;transcript_id=Rv3619c Chromosome ena exon 4059984 4060268 . - . Parent=transcript:Rv3619c;Name=Rv3619c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3619c-1;rank=1 Chromosome ena CDS 4059984 4060268 . - 0 ID=CDS:Rv3619c;Parent=transcript:Rv3619c;protein_id=Rv3619c ### -Chromosome ena gene 4060295 4060591 . - . ID=gene:Rv3620c;Name=esxW;biotype=protein_coding;description=Putative ESAT-6 like protein EsxW (ESAT-6 like protein 10);gene_id=Rv3620c;logic_name=ena +Chromosome ena gene 4060295 4060591 . - . ID=gene:Rv3620c;Name=esxW;biotype=protein_coding;description=Putative ESAT-6 like protein EsxW (ESAT-6 like protein 10);gene_id=Rv3620c;logic_name=ena Chromosome ena mRNA 4060295 4060591 . - . ID=transcript:Rv3620c;Parent=gene:Rv3620c;Name=esxW-1;biotype=protein_coding;transcript_id=Rv3620c Chromosome ena exon 4060295 4060591 . - . Parent=transcript:Rv3620c;Name=Rv3620c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3620c-1;rank=1 Chromosome ena CDS 4060295 4060591 . - 0 ID=CDS:Rv3620c;Parent=transcript:Rv3620c;protein_id=Rv3620c ### -Chromosome ena gene 4060648 4061889 . - . ID=gene:Rv3621c;Name=PPE65;biotype=protein_coding;description=PPE family protein PPE65;gene_id=Rv3621c;logic_name=ena +Chromosome ena gene 4060648 4061889 . - . ID=gene:Rv3621c;Name=PPE65;biotype=protein_coding;description=PPE family protein PPE65;gene_id=Rv3621c;logic_name=ena Chromosome ena mRNA 4060648 4061889 . - . ID=transcript:Rv3621c;Parent=gene:Rv3621c;Name=PPE65-1;biotype=protein_coding;transcript_id=Rv3621c Chromosome ena exon 4060648 4061889 . - . Parent=transcript:Rv3621c;Name=Rv3621c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3621c-1;rank=1 Chromosome ena CDS 4060648 4061889 . - 0 ID=CDS:Rv3621c;Parent=transcript:Rv3621c;protein_id=Rv3621c ### -Chromosome ena gene 4061899 4062198 . - . ID=gene:Rv3622c;Name=PE32;biotype=protein_coding;description=PE family protein PE32;gene_id=Rv3622c;logic_name=ena +Chromosome ena gene 4061899 4062198 . - . ID=gene:Rv3622c;Name=PE32;biotype=protein_coding;description=PE family protein PE32;gene_id=Rv3622c;logic_name=ena Chromosome ena mRNA 4061899 4062198 . - . ID=transcript:Rv3622c;Parent=gene:Rv3622c;Name=PE32-1;biotype=protein_coding;transcript_id=Rv3622c Chromosome ena exon 4061899 4062198 . - . Parent=transcript:Rv3622c;Name=Rv3622c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3622c-1;rank=1 Chromosome ena CDS 4061899 4062198 . - 0 ID=CDS:Rv3622c;Parent=transcript:Rv3622c;protein_id=Rv3622c ### -Chromosome ena gene 4062527 4063249 . + . ID=gene:Rv3623;Name=lpqG;biotype=protein_coding;description=Probable conserved lipoprotein LpqG;gene_id=Rv3623;logic_name=ena +Chromosome ena gene 4062527 4063249 . + . ID=gene:Rv3623;Name=lpqG;biotype=protein_coding;description=Probable conserved lipoprotein LpqG;gene_id=Rv3623;logic_name=ena Chromosome ena mRNA 4062527 4063249 . + . ID=transcript:Rv3623;Parent=gene:Rv3623;Name=lpqG-1;biotype=protein_coding;transcript_id=Rv3623 Chromosome ena exon 4062527 4063249 . + . Parent=transcript:Rv3623;Name=Rv3623-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3623-1;rank=1 Chromosome ena CDS 4062527 4063249 . + 0 ID=CDS:Rv3623;Parent=transcript:Rv3623;protein_id=Rv3623 ### -Chromosome ena gene 4063254 4063904 . - . ID=gene:Rv3624c;Name=hpt;biotype=protein_coding;description=Hypoxanthine-guanine phosphoribosyltransferase Hpt (HGPRT) (HGPRTase) (hypoxanthine phosphoribosyltransferase) (imp pyrophosphorylase) (imp diphosphorylase) (transphosphoribosyltransferase) (guanine phosphoribosyltransferase);gene_id=Rv3624c;logic_name=ena +Chromosome ena gene 4063254 4063904 . - . ID=gene:Rv3624c;Name=hpt;biotype=protein_coding;description=Hypoxanthine-guanine phosphoribosyltransferase Hpt (HGPRT) (HGPRTase) (hypoxanthine phosphoribosyltransferase) (imp pyrophosphorylase) (imp diphosphorylase) (transphosphoribosyltransferase) (guanine phosphoribosyltransferase);gene_id=Rv3624c;logic_name=ena Chromosome ena mRNA 4063254 4063904 . - . ID=transcript:Rv3624c;Parent=gene:Rv3624c;Name=hpt-1;biotype=protein_coding;transcript_id=Rv3624c Chromosome ena exon 4063254 4063904 . - . Parent=transcript:Rv3624c;Name=Rv3624c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3624c-1;rank=1 Chromosome ena CDS 4063254 4063904 . - 0 ID=CDS:Rv3624c;Parent=transcript:Rv3624c;protein_id=Rv3624c ### -Chromosome ena gene 4063901 4064872 . - . ID=gene:Rv3625c;Name=mesJ;biotype=protein_coding;description=Possible cell cycle protein MesJ;gene_id=Rv3625c;logic_name=ena +Chromosome ena gene 4063901 4064872 . - . ID=gene:Rv3625c;Name=mesJ;biotype=protein_coding;description=Possible cell cycle protein MesJ;gene_id=Rv3625c;logic_name=ena Chromosome ena mRNA 4063901 4064872 . - . ID=transcript:Rv3625c;Parent=gene:Rv3625c;Name=mesJ-1;biotype=protein_coding;transcript_id=Rv3625c Chromosome ena exon 4063901 4064872 . - . Parent=transcript:Rv3625c;Name=Rv3625c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3625c-1;rank=1 Chromosome ena CDS 4063901 4064872 . - 0 ID=CDS:Rv3625c;Parent=transcript:Rv3625c;protein_id=Rv3625c ### -Chromosome ena gene 4064851 4065903 . - . ID=gene:Rv3626c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3626c;logic_name=ena +Chromosome ena gene 4064851 4065903 . - . ID=gene:Rv3626c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3626c;logic_name=ena Chromosome ena mRNA 4064851 4065903 . - . ID=transcript:Rv3626c;Parent=gene:Rv3626c;biotype=protein_coding;transcript_id=Rv3626c Chromosome ena exon 4064851 4065903 . - . Parent=transcript:Rv3626c;Name=Rv3626c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3626c-1;rank=1 Chromosome ena CDS 4064851 4065903 . - 0 ID=CDS:Rv3626c;Parent=transcript:Rv3626c;protein_id=Rv3626c ### -Chromosome ena gene 4065900 4067285 . - . ID=gene:Rv3627c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3627c;logic_name=ena +Chromosome ena gene 4065900 4067285 . - . ID=gene:Rv3627c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3627c;logic_name=ena Chromosome ena mRNA 4065900 4067285 . - . ID=transcript:Rv3627c;Parent=gene:Rv3627c;biotype=protein_coding;transcript_id=Rv3627c Chromosome ena exon 4065900 4067285 . - . Parent=transcript:Rv3627c;Name=Rv3627c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3627c-1;rank=1 Chromosome ena CDS 4065900 4067285 . - 0 ID=CDS:Rv3627c;Parent=transcript:Rv3627c;protein_id=Rv3627c ### -Chromosome ena gene 4067423 4067911 . + . ID=gene:Rv3628;Name=ppa;biotype=protein_coding;description=Inorganic pyrophosphatase Ppa (pyrophosphate phospho-hydrolase) (PPASE) (inorganic diphosphatase) (diphosphate phospho-hydrolase);gene_id=Rv3628;logic_name=ena +Chromosome ena gene 4067423 4067911 . + . ID=gene:Rv3628;Name=ppa;biotype=protein_coding;description=Inorganic pyrophosphatase Ppa (pyrophosphate phospho-hydrolase) (PPASE) (inorganic diphosphatase) (diphosphate phospho-hydrolase);gene_id=Rv3628;logic_name=ena Chromosome ena mRNA 4067423 4067911 . + . ID=transcript:Rv3628;Parent=gene:Rv3628;Name=ppa-1;biotype=protein_coding;transcript_id=Rv3628 Chromosome ena exon 4067423 4067911 . + . Parent=transcript:Rv3628;Name=Rv3628-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3628-1;rank=1 Chromosome ena CDS 4067423 4067911 . + 0 ID=CDS:Rv3628;Parent=transcript:Rv3628;protein_id=Rv3628 ### -Chromosome ena gene 4067957 4069054 . - . ID=gene:Rv3629c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3629c;logic_name=ena +Chromosome ena gene 4067957 4069054 . - . ID=gene:Rv3629c;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3629c;logic_name=ena Chromosome ena mRNA 4067957 4069054 . - . ID=transcript:Rv3629c;Parent=gene:Rv3629c;biotype=protein_coding;transcript_id=Rv3629c Chromosome ena exon 4067957 4069054 . - . Parent=transcript:Rv3629c;Name=Rv3629c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3629c-1;rank=1 Chromosome ena CDS 4067957 4069054 . - 0 ID=CDS:Rv3629c;Parent=transcript:Rv3629c;protein_id=Rv3629c ### -Chromosome ena gene 4069175 4070470 . + . ID=gene:Rv3630;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3630;logic_name=ena +Chromosome ena gene 4069175 4070470 . + . ID=gene:Rv3630;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3630;logic_name=ena Chromosome ena mRNA 4069175 4070470 . + . ID=transcript:Rv3630;Parent=gene:Rv3630;biotype=protein_coding;transcript_id=Rv3630 Chromosome ena exon 4069175 4070470 . + . Parent=transcript:Rv3630;Name=Rv3630-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3630-1;rank=1 Chromosome ena CDS 4069175 4070470 . + 0 ID=CDS:Rv3630;Parent=transcript:Rv3630;protein_id=Rv3630 ### -Chromosome ena gene 4070514 4071239 . + . ID=gene:Rv3631;biotype=protein_coding;description=Possible transferase (possibly glycosyltransferase);gene_id=Rv3631;logic_name=ena +Chromosome ena gene 4070514 4071239 . + . ID=gene:Rv3631;biotype=protein_coding;description=Possible transferase (possibly glycosyltransferase);gene_id=Rv3631;logic_name=ena Chromosome ena mRNA 4070514 4071239 . + . ID=transcript:Rv3631;Parent=gene:Rv3631;biotype=protein_coding;transcript_id=Rv3631 Chromosome ena exon 4070514 4071239 . + . Parent=transcript:Rv3631;Name=Rv3631-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3631-1;rank=1 Chromosome ena CDS 4070514 4071239 . + 0 ID=CDS:Rv3631;Parent=transcript:Rv3631;protein_id=Rv3631 ### -Chromosome ena gene 4071236 4071580 . + . ID=gene:Rv3632;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3632;logic_name=ena +Chromosome ena gene 4071236 4071580 . + . ID=gene:Rv3632;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3632;logic_name=ena Chromosome ena mRNA 4071236 4071580 . + . ID=transcript:Rv3632;Parent=gene:Rv3632;biotype=protein_coding;transcript_id=Rv3632 Chromosome ena exon 4071236 4071580 . + . Parent=transcript:Rv3632;Name=Rv3632-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3632-1;rank=1 Chromosome ena CDS 4071236 4071580 . + 0 ID=CDS:Rv3632;Parent=transcript:Rv3632;protein_id=Rv3632 ### -Chromosome ena gene 4071791 4072666 . + . ID=gene:Rv3633;biotype=protein_coding;description=Conserved protein;gene_id=Rv3633;logic_name=ena +Chromosome ena gene 4071791 4072666 . + . ID=gene:Rv3633;biotype=protein_coding;description=Conserved protein;gene_id=Rv3633;logic_name=ena Chromosome ena mRNA 4071791 4072666 . + . ID=transcript:Rv3633;Parent=gene:Rv3633;biotype=protein_coding;transcript_id=Rv3633 Chromosome ena exon 4071791 4072666 . + . Parent=transcript:Rv3633;Name=Rv3633-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3633-1;rank=1 Chromosome ena CDS 4071791 4072666 . + 0 ID=CDS:Rv3633;Parent=transcript:Rv3633;protein_id=Rv3633 ### -Chromosome ena gene 4072667 4073611 . - . ID=gene:Rv3634c;Name=galE1;biotype=protein_coding;description=UDP-glucose 4-epimerase GalE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv3634c;logic_name=ena +Chromosome ena gene 4072667 4073611 . - . ID=gene:Rv3634c;Name=galE1;biotype=protein_coding;description=UDP-glucose 4-epimerase GalE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase);gene_id=Rv3634c;logic_name=ena Chromosome ena mRNA 4072667 4073611 . - . ID=transcript:Rv3634c;Parent=gene:Rv3634c;Name=galE1-1;biotype=protein_coding;transcript_id=Rv3634c Chromosome ena exon 4072667 4073611 . - . Parent=transcript:Rv3634c;Name=Rv3634c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3634c-1;rank=1 Chromosome ena CDS 4072667 4073611 . - 0 ID=CDS:Rv3634c;Parent=transcript:Rv3634c;protein_id=Rv3634c ### -Chromosome ena gene 4073634 4075409 . + . ID=gene:Rv3635;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3635;logic_name=ena +Chromosome ena gene 4073634 4075409 . + . ID=gene:Rv3635;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3635;logic_name=ena Chromosome ena mRNA 4073634 4075409 . + . ID=transcript:Rv3635;Parent=gene:Rv3635;biotype=protein_coding;transcript_id=Rv3635 Chromosome ena exon 4073634 4075409 . + . Parent=transcript:Rv3635;Name=Rv3635-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3635-1;rank=1 Chromosome ena CDS 4073634 4075409 . + 0 ID=CDS:Rv3635;Parent=transcript:Rv3635;protein_id=Rv3635 ### -Chromosome ena_mobile_element biological_region 4075615 4077750 . + . external_name=IS1534%2C len: 2136 nt. Putative Insertion sequence element%2C IS1534 (IS15C10.2)%2C that resembles IS21%3B possibly defective.;logic_name=ena_mobile_element -Chromosome ena gene 4075752 4076099 . + . ID=gene:Rv3636;biotype=protein_coding;description=Possible transposase;gene_id=Rv3636;logic_name=ena +Chromosome ena_mobile_element biological_region 4075615 4077750 . + . external_name=IS1534%2C len: 2136 nt. Putative Insertion sequence element%2C IS1534 (IS15C10.2)%2C that resembles IS21%3B possibly defective.;logic_name=ena_mobile_element +Chromosome ena gene 4075752 4076099 . + . ID=gene:Rv3636;biotype=protein_coding;description=Possible transposase;gene_id=Rv3636;logic_name=ena Chromosome ena mRNA 4075752 4076099 . + . ID=transcript:Rv3636;Parent=gene:Rv3636;biotype=protein_coding;transcript_id=Rv3636 Chromosome ena exon 4075752 4076099 . + . Parent=transcript:Rv3636;Name=Rv3636-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3636-1;rank=1 Chromosome ena CDS 4075752 4076099 . + 0 ID=CDS:Rv3636;Parent=transcript:Rv3636;protein_id=Rv3636 ### -Chromosome ena gene 4076484 4076984 . + . ID=gene:Rv3637;biotype=protein_coding;description=Possible transposase;gene_id=Rv3637;logic_name=ena +Chromosome ena gene 4076484 4076984 . + . ID=gene:Rv3637;biotype=protein_coding;description=Possible transposase;gene_id=Rv3637;logic_name=ena Chromosome ena mRNA 4076484 4076984 . + . ID=transcript:Rv3637;Parent=gene:Rv3637;biotype=protein_coding;transcript_id=Rv3637 Chromosome ena exon 4076484 4076984 . + . Parent=transcript:Rv3637;Name=Rv3637-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3637-1;rank=1 Chromosome ena CDS 4076484 4076984 . + 0 ID=CDS:Rv3637;Parent=transcript:Rv3637;protein_id=Rv3637 ### -Chromosome ena gene 4076984 4077730 . + . ID=gene:Rv3638;biotype=protein_coding;description=Possible transposase;gene_id=Rv3638;logic_name=ena +Chromosome ena gene 4076984 4077730 . + . ID=gene:Rv3638;biotype=protein_coding;description=Possible transposase;gene_id=Rv3638;logic_name=ena Chromosome ena mRNA 4076984 4077730 . + . ID=transcript:Rv3638;Parent=gene:Rv3638;biotype=protein_coding;transcript_id=Rv3638 Chromosome ena exon 4076984 4077730 . + . Parent=transcript:Rv3638;Name=Rv3638-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3638-1;rank=1 Chromosome ena CDS 4076984 4077730 . + 0 ID=CDS:Rv3638;Parent=transcript:Rv3638;protein_id=Rv3638 ### -Chromosome ena gene 4077884 4078450 . - . ID=gene:Rv3639c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3639c;logic_name=ena +Chromosome ena gene 4077884 4078450 . - . ID=gene:Rv3639c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3639c;logic_name=ena Chromosome ena mRNA 4077884 4078450 . - . ID=transcript:Rv3639c;Parent=gene:Rv3639c;biotype=protein_coding;transcript_id=Rv3639c Chromosome ena exon 4077884 4078450 . - . Parent=transcript:Rv3639c;Name=Rv3639c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3639c-1;rank=1 Chromosome ena CDS 4077884 4078450 . - 0 ID=CDS:Rv3639c;Parent=transcript:Rv3639c;protein_id=Rv3639c ### -Chromosome ena_mobile_element biological_region 4078506 4079798 . - . external_name=IS1553%2C len: 1293 nt. Putative Insertion sequence element%2C IS1553.;logic_name=ena_mobile_element -Chromosome ena gene 4078520 4079749 . - . ID=gene:Rv3640c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3640c;logic_name=ena +Chromosome ena_mobile_element biological_region 4078506 4079798 . - . external_name=IS1553%2C len: 1293 nt. Putative Insertion sequence element%2C IS1553.;logic_name=ena_mobile_element +Chromosome ena gene 4078520 4079749 . - . ID=gene:Rv3640c;biotype=protein_coding;description=Probable transposase;gene_id=Rv3640c;logic_name=ena Chromosome ena mRNA 4078520 4079749 . - . ID=transcript:Rv3640c;Parent=gene:Rv3640c;biotype=protein_coding;transcript_id=Rv3640c Chromosome ena exon 4078520 4079749 . - . Parent=transcript:Rv3640c;Name=Rv3640c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3640c-1;rank=1 Chromosome ena CDS 4078520 4079749 . - 0 ID=CDS:Rv3640c;Parent=transcript:Rv3640c;protein_id=Rv3640c ### -Chromosome ena gene 4079925 4080560 . - . ID=gene:Rv3641c;Name=fic;biotype=protein_coding;description=Possible cell filamentation protein Fic;gene_id=Rv3641c;logic_name=ena +Chromosome ena gene 4079925 4080560 . - . ID=gene:Rv3641c;Name=fic;biotype=protein_coding;description=Possible cell filamentation protein Fic;gene_id=Rv3641c;logic_name=ena Chromosome ena mRNA 4079925 4080560 . - . ID=transcript:Rv3641c;Parent=gene:Rv3641c;Name=fic-1;biotype=protein_coding;transcript_id=Rv3641c Chromosome ena exon 4079925 4080560 . - . Parent=transcript:Rv3641c;Name=Rv3641c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3641c-1;rank=1 Chromosome ena CDS 4079925 4080560 . - 0 ID=CDS:Rv3641c;Parent=transcript:Rv3641c;protein_id=Rv3641c ### -Chromosome ena gene 4080571 4080765 . - . ID=gene:Rv3642c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3642c;logic_name=ena +Chromosome ena gene 4080571 4080765 . - . ID=gene:Rv3642c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3642c;logic_name=ena Chromosome ena mRNA 4080571 4080765 . - . ID=transcript:Rv3642c;Parent=gene:Rv3642c;biotype=protein_coding;transcript_id=Rv3642c Chromosome ena exon 4080571 4080765 . - . Parent=transcript:Rv3642c;Name=Rv3642c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3642c-1;rank=1 Chromosome ena CDS 4080571 4080765 . - 0 ID=CDS:Rv3642c;Parent=transcript:Rv3642c;protein_id=Rv3642c ### -Chromosome ena gene 4081160 4081351 . + . ID=gene:Rv3643;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3643;logic_name=ena +Chromosome ena gene 4081160 4081351 . + . ID=gene:Rv3643;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3643;logic_name=ena Chromosome ena mRNA 4081160 4081351 . + . ID=transcript:Rv3643;Parent=gene:Rv3643;biotype=protein_coding;transcript_id=Rv3643 Chromosome ena exon 4081160 4081351 . + . Parent=transcript:Rv3643;Name=Rv3643-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3643-1;rank=1 Chromosome ena CDS 4081160 4081351 . + 0 ID=CDS:Rv3643;Parent=transcript:Rv3643;protein_id=Rv3643 @@ -19103,42 +19103,42 @@ Chromosome ena transcript 4081365 4081437 . - . ID=transcript:EBG00000313345;Par Chromosome ena exon 4081365 4081437 . - . Parent=transcript:EBG00000313345;Name=EBG00000313345;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313345;rank=1 ### Chromosome ena_gene biological_region 4081365 4081437 . - . external_name=AL123456.3:gene:complement(4081365..4081437);logic_name=ena_gene -Chromosome ena gene 4081516 4082721 . - . ID=gene:Rv3644c;biotype=protein_coding;description=Possible DNA polymerase;gene_id=Rv3644c;logic_name=ena +Chromosome ena gene 4081516 4082721 . - . ID=gene:Rv3644c;biotype=protein_coding;description=Possible DNA polymerase;gene_id=Rv3644c;logic_name=ena Chromosome ena mRNA 4081516 4082721 . - . ID=transcript:Rv3644c;Parent=gene:Rv3644c;biotype=protein_coding;transcript_id=Rv3644c Chromosome ena exon 4081516 4082721 . - . Parent=transcript:Rv3644c;Name=Rv3644c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3644c-1;rank=1 Chromosome ena CDS 4081516 4082721 . - 0 ID=CDS:Rv3644c;Parent=transcript:Rv3644c;protein_id=Rv3644c ### -Chromosome ena gene 4082807 4084456 . + . ID=gene:Rv3645;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3645;logic_name=ena +Chromosome ena gene 4082807 4084456 . + . ID=gene:Rv3645;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3645;logic_name=ena Chromosome ena mRNA 4082807 4084456 . + . ID=transcript:Rv3645;Parent=gene:Rv3645;biotype=protein_coding;transcript_id=Rv3645 Chromosome ena exon 4082807 4084456 . + . Parent=transcript:Rv3645;Name=Rv3645-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3645-1;rank=1 Chromosome ena CDS 4082807 4084456 . + 0 ID=CDS:Rv3645;Parent=transcript:Rv3645;protein_id=Rv3645 ### -Chromosome ena gene 4084453 4087257 . - . ID=gene:Rv3646c;Name=topA;biotype=protein_coding;description=DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I);gene_id=Rv3646c;logic_name=ena +Chromosome ena gene 4084453 4087257 . - . ID=gene:Rv3646c;Name=topA;biotype=protein_coding;description=DNA topoisomerase I TopA (omega-protein) (relaxing enzyme) (untwisting enzyme) (swivelase) (type I DNA topoisomerase) (nicking-closing enzyme) (TOPO I);gene_id=Rv3646c;logic_name=ena Chromosome ena mRNA 4084453 4087257 . - . ID=transcript:Rv3646c;Parent=gene:Rv3646c;Name=topA-1;biotype=protein_coding;transcript_id=Rv3646c Chromosome ena exon 4084453 4087257 . - . Parent=transcript:Rv3646c;Name=Rv3646c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3646c-1;rank=1 Chromosome ena CDS 4084453 4087257 . - 0 ID=CDS:Rv3646c;Parent=transcript:Rv3646c;protein_id=Rv3646c ### -Chromosome ena gene 4087610 4088188 . - . ID=gene:Rv3647c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3647c;logic_name=ena +Chromosome ena gene 4087610 4088188 . - . ID=gene:Rv3647c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3647c;logic_name=ena Chromosome ena mRNA 4087610 4088188 . - . ID=transcript:Rv3647c;Parent=gene:Rv3647c;biotype=protein_coding;transcript_id=Rv3647c Chromosome ena exon 4087610 4088188 . - . Parent=transcript:Rv3647c;Name=Rv3647c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3647c-1;rank=1 Chromosome ena CDS 4087610 4088188 . - 0 ID=CDS:Rv3647c;Parent=transcript:Rv3647c;protein_id=Rv3647c ### -Chromosome ena gene 4088328 4088531 . - . ID=gene:Rv3648c;Name=cspA;biotype=protein_coding;description=Probable cold shock protein A CspA;gene_id=Rv3648c;logic_name=ena +Chromosome ena gene 4088328 4088531 . - . ID=gene:Rv3648c;Name=cspA;biotype=protein_coding;description=Probable cold shock protein A CspA;gene_id=Rv3648c;logic_name=ena Chromosome ena mRNA 4088328 4088531 . - . ID=transcript:Rv3648c;Parent=gene:Rv3648c;Name=cspA-1;biotype=protein_coding;transcript_id=Rv3648c Chromosome ena exon 4088328 4088531 . - . Parent=transcript:Rv3648c;Name=Rv3648c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3648c-1;rank=1 Chromosome ena CDS 4088328 4088531 . - 0 ID=CDS:Rv3648c;Parent=transcript:Rv3648c;protein_id=Rv3648c ### -Chromosome ena gene 4088781 4091096 . + . ID=gene:Rv3649;biotype=protein_coding;description=Probable helicase;gene_id=Rv3649;logic_name=ena +Chromosome ena gene 4088781 4091096 . + . ID=gene:Rv3649;biotype=protein_coding;description=Probable helicase;gene_id=Rv3649;logic_name=ena Chromosome ena mRNA 4088781 4091096 . + . ID=transcript:Rv3649;Parent=gene:Rv3649;biotype=protein_coding;transcript_id=Rv3649 Chromosome ena exon 4088781 4091096 . + . Parent=transcript:Rv3649;Name=Rv3649-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3649-1;rank=1 Chromosome ena CDS 4088781 4091096 . + 0 ID=CDS:Rv3649;Parent=transcript:Rv3649;protein_id=Rv3649 ### -Chromosome ena gene 4091233 4091517 . + . ID=gene:Rv3650;Name=PE33;biotype=protein_coding;description=PE family protein PE33;gene_id=Rv3650;logic_name=ena +Chromosome ena gene 4091233 4091517 . + . ID=gene:Rv3650;Name=PE33;biotype=protein_coding;description=PE family protein PE33;gene_id=Rv3650;logic_name=ena Chromosome ena mRNA 4091233 4091517 . + . ID=transcript:Rv3650;Parent=gene:Rv3650;Name=PE33-1;biotype=protein_coding;transcript_id=Rv3650 Chromosome ena exon 4091233 4091517 . + . Parent=transcript:Rv3650;Name=Rv3650-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3650-1;rank=1 Chromosome ena CDS 4091233 4091517 . + 0 ID=CDS:Rv3650;Parent=transcript:Rv3650;protein_id=Rv3650 ### -Chromosome ena gene 4091841 4092878 . + . ID=gene:Rv3651;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3651;logic_name=ena +Chromosome ena gene 4091841 4092878 . + . ID=gene:Rv3651;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3651;logic_name=ena Chromosome ena mRNA 4091841 4092878 . + . ID=transcript:Rv3651;Parent=gene:Rv3651;biotype=protein_coding;transcript_id=Rv3651 Chromosome ena exon 4091841 4092878 . + . Parent=transcript:Rv3651;Name=Rv3651-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3651-1;rank=1 Chromosome ena CDS 4091841 4092878 . + 0 ID=CDS:Rv3651;Parent=transcript:Rv3651;protein_id=Rv3651 @@ -19148,47 +19148,47 @@ Chromosome ena transcript 4093468 4093522 . + . ID=transcript:EBG00000313385;Par Chromosome ena exon 4093468 4093522 . + . Parent=transcript:EBG00000313385;Name=EBG00000313385;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313385;rank=1 ### Chromosome ena_gene biological_region 4093468 4093522 . + . external_name=AL123456.3:gene:4093468..4093522;logic_name=ena_gene -Chromosome ena gene 4093632 4093946 . + . ID=gene:Rv3652;Name=PE_PGRS60;biotype=protein_coding;description=PE-PGRS family-related protein PE_PGRS60;gene_id=Rv3652;logic_name=ena +Chromosome ena gene 4093632 4093946 . + . ID=gene:Rv3652;Name=PE_PGRS60;biotype=protein_coding;description=PE-PGRS family-related protein PE_PGRS60;gene_id=Rv3652;logic_name=ena Chromosome ena mRNA 4093632 4093946 . + . ID=transcript:Rv3652;Parent=gene:Rv3652;Name=PE_PGRS60-1;biotype=protein_coding;transcript_id=Rv3652 Chromosome ena exon 4093632 4093946 . + . Parent=transcript:Rv3652;Name=Rv3652-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3652-1;rank=1 Chromosome ena CDS 4093632 4093946 . + 0 ID=CDS:Rv3652;Parent=transcript:Rv3652;protein_id=Rv3652 ### -Chromosome ena gene 4093940 4094527 . + . ID=gene:Rv3653;Name=PE_PGRS61;biotype=protein_coding;description=PE-PGRS family-related protein PE_PGRS61;gene_id=Rv3653;logic_name=ena +Chromosome ena gene 4093940 4094527 . + . ID=gene:Rv3653;Name=PE_PGRS61;biotype=protein_coding;description=PE-PGRS family-related protein PE_PGRS61;gene_id=Rv3653;logic_name=ena Chromosome ena mRNA 4093940 4094527 . + . ID=transcript:Rv3653;Parent=gene:Rv3653;Name=PE_PGRS61-1;biotype=protein_coding;transcript_id=Rv3653 Chromosome ena exon 4093940 4094527 . + . Parent=transcript:Rv3653;Name=Rv3653-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3653-1;rank=1 Chromosome ena CDS 4093940 4094527 . + 0 ID=CDS:Rv3653;Parent=transcript:Rv3653;protein_id=Rv3653 ### -Chromosome ena gene 4094660 4094914 . - . ID=gene:Rv3654c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3654c;logic_name=ena +Chromosome ena gene 4094660 4094914 . - . ID=gene:Rv3654c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3654c;logic_name=ena Chromosome ena mRNA 4094660 4094914 . - . ID=transcript:Rv3654c;Parent=gene:Rv3654c;biotype=protein_coding;transcript_id=Rv3654c Chromosome ena exon 4094660 4094914 . - . Parent=transcript:Rv3654c;Name=Rv3654c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3654c-1;rank=1 Chromosome ena CDS 4094660 4094914 . - 0 ID=CDS:Rv3654c;Parent=transcript:Rv3654c;protein_id=Rv3654c ### -Chromosome ena gene 4094923 4095300 . - . ID=gene:Rv3655c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3655c;logic_name=ena +Chromosome ena gene 4094923 4095300 . - . ID=gene:Rv3655c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3655c;logic_name=ena Chromosome ena mRNA 4094923 4095300 . - . ID=transcript:Rv3655c;Parent=gene:Rv3655c;biotype=protein_coding;transcript_id=Rv3655c Chromosome ena exon 4094923 4095300 . - . Parent=transcript:Rv3655c;Name=Rv3655c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3655c-1;rank=1 Chromosome ena CDS 4094923 4095300 . - 0 ID=CDS:Rv3655c;Parent=transcript:Rv3655c;protein_id=Rv3655c ### -Chromosome ena gene 4095324 4095530 . - . ID=gene:Rv3656c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3656c;logic_name=ena +Chromosome ena gene 4095324 4095530 . - . ID=gene:Rv3656c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3656c;logic_name=ena Chromosome ena mRNA 4095324 4095530 . - . ID=transcript:Rv3656c;Parent=gene:Rv3656c;biotype=protein_coding;transcript_id=Rv3656c Chromosome ena exon 4095324 4095530 . - . Parent=transcript:Rv3656c;Name=Rv3656c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3656c-1;rank=1 Chromosome ena CDS 4095324 4095530 . - 0 ID=CDS:Rv3656c;Parent=transcript:Rv3656c;protein_id=Rv3656c ### -Chromosome ena gene 4095540 4096115 . - . ID=gene:Rv3657c;biotype=protein_coding;description=Possible conserved alanine rich membrane protein;gene_id=Rv3657c;logic_name=ena +Chromosome ena gene 4095540 4096115 . - . ID=gene:Rv3657c;biotype=protein_coding;description=Possible conserved alanine rich membrane protein;gene_id=Rv3657c;logic_name=ena Chromosome ena mRNA 4095540 4096115 . - . ID=transcript:Rv3657c;Parent=gene:Rv3657c;biotype=protein_coding;transcript_id=Rv3657c Chromosome ena exon 4095540 4096115 . - . Parent=transcript:Rv3657c;Name=Rv3657c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3657c-1;rank=1 Chromosome ena CDS 4095540 4096115 . - 0 ID=CDS:Rv3657c;Parent=transcript:Rv3657c;protein_id=Rv3657c ### -Chromosome ena gene 4096139 4096939 . - . ID=gene:Rv3658c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3658c;logic_name=ena +Chromosome ena gene 4096139 4096939 . - . ID=gene:Rv3658c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3658c;logic_name=ena Chromosome ena mRNA 4096139 4096939 . - . ID=transcript:Rv3658c;Parent=gene:Rv3658c;biotype=protein_coding;transcript_id=Rv3658c Chromosome ena exon 4096139 4096939 . - . Parent=transcript:Rv3658c;Name=Rv3658c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3658c-1;rank=1 Chromosome ena CDS 4096139 4096939 . - 0 ID=CDS:Rv3658c;Parent=transcript:Rv3658c;protein_id=Rv3658c ### -Chromosome ena gene 4096936 4097994 . - . ID=gene:Rv3659c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3659c;logic_name=ena +Chromosome ena gene 4096936 4097994 . - . ID=gene:Rv3659c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3659c;logic_name=ena Chromosome ena mRNA 4096936 4097994 . - . ID=transcript:Rv3659c;Parent=gene:Rv3659c;biotype=protein_coding;transcript_id=Rv3659c Chromosome ena exon 4096936 4097994 . - . Parent=transcript:Rv3659c;Name=Rv3659c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3659c-1;rank=1 Chromosome ena CDS 4096936 4097994 . - 0 ID=CDS:Rv3659c;Parent=transcript:Rv3659c;protein_id=Rv3659c ### -Chromosome ena gene 4098096 4099148 . - . ID=gene:Rv3660c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3660c;logic_name=ena +Chromosome ena gene 4098096 4099148 . - . ID=gene:Rv3660c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3660c;logic_name=ena Chromosome ena mRNA 4098096 4099148 . - . ID=transcript:Rv3660c;Parent=gene:Rv3660c;biotype=protein_coding;transcript_id=Rv3660c Chromosome ena exon 4098096 4099148 . - . Parent=transcript:Rv3660c;Name=Rv3660c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3660c-1;rank=1 Chromosome ena CDS 4098096 4099148 . - 0 ID=CDS:Rv3660c;Parent=transcript:Rv3660c;protein_id=Rv3660c @@ -19198,7 +19198,7 @@ Chromosome ena transcript 4099386 4099478 . - . ID=transcript:EBG00000313324;Par Chromosome ena exon 4099386 4099478 . - . Parent=transcript:EBG00000313324;Name=EBG00000313324;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313324;rank=1 ### Chromosome ena_gene biological_region 4099386 4099478 . - . external_name=AL123456.3:gene:complement(4099386..4099478);logic_name=ena_gene -Chromosome ena gene 4099647 4100510 . + . ID=gene:Rv3661;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3661;logic_name=ena +Chromosome ena gene 4099647 4100510 . + . ID=gene:Rv3661;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3661;logic_name=ena Chromosome ena mRNA 4099647 4100510 . + . ID=transcript:Rv3661;Parent=gene:Rv3661;biotype=protein_coding;transcript_id=Rv3661 Chromosome ena exon 4099647 4100510 . + . Parent=transcript:Rv3661;Name=Rv3661-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3661-1;rank=1 Chromosome ena CDS 4099647 4100510 . + 0 ID=CDS:Rv3661;Parent=transcript:Rv3661;protein_id=Rv3661 @@ -19208,122 +19208,122 @@ Chromosome ena transcript 4100669 4100968 . + . ID=transcript:EBG00000313318;Par Chromosome ena exon 4100669 4100968 . + . Parent=transcript:EBG00000313318;Name=EBG00000313318;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313318;rank=1 ### Chromosome ena_gene biological_region 4100669 4100968 . + . external_name=AL123456.3:gene:4100669..4100968;logic_name=ena_gene -Chromosome ena gene 4101265 4102035 . - . ID=gene:Rv3662c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3662c;logic_name=ena +Chromosome ena gene 4101265 4102035 . - . ID=gene:Rv3662c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3662c;logic_name=ena Chromosome ena mRNA 4101265 4102035 . - . ID=transcript:Rv3662c;Parent=gene:Rv3662c;biotype=protein_coding;transcript_id=Rv3662c Chromosome ena exon 4101265 4102035 . - . Parent=transcript:Rv3662c;Name=Rv3662c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3662c-1;rank=1 Chromosome ena CDS 4101265 4102035 . - 0 ID=CDS:Rv3662c;Parent=transcript:Rv3662c;protein_id=Rv3662c ### -Chromosome ena gene 4102032 4103678 . - . ID=gene:Rv3663c;Name=dppD;biotype=protein_coding;description=Probable dipeptide-transport ATP-binding protein ABC transporter DppD;gene_id=Rv3663c;logic_name=ena +Chromosome ena gene 4102032 4103678 . - . ID=gene:Rv3663c;Name=dppD;biotype=protein_coding;description=Probable dipeptide-transport ATP-binding protein ABC transporter DppD;gene_id=Rv3663c;logic_name=ena Chromosome ena mRNA 4102032 4103678 . - . ID=transcript:Rv3663c;Parent=gene:Rv3663c;Name=dppD-1;biotype=protein_coding;transcript_id=Rv3663c Chromosome ena exon 4102032 4103678 . - . Parent=transcript:Rv3663c;Name=Rv3663c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3663c-1;rank=1 Chromosome ena CDS 4102032 4103678 . - 0 ID=CDS:Rv3663c;Parent=transcript:Rv3663c;protein_id=Rv3663c ### -Chromosome ena gene 4103675 4104475 . - . ID=gene:Rv3664c;Name=dppC;biotype=protein_coding;description=Probable dipeptide-transport integral membrane protein ABC transporter DppC;gene_id=Rv3664c;logic_name=ena +Chromosome ena gene 4103675 4104475 . - . ID=gene:Rv3664c;Name=dppC;biotype=protein_coding;description=Probable dipeptide-transport integral membrane protein ABC transporter DppC;gene_id=Rv3664c;logic_name=ena Chromosome ena mRNA 4103675 4104475 . - . ID=transcript:Rv3664c;Parent=gene:Rv3664c;Name=dppC-1;biotype=protein_coding;transcript_id=Rv3664c Chromosome ena exon 4103675 4104475 . - . Parent=transcript:Rv3664c;Name=Rv3664c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3664c-1;rank=1 Chromosome ena CDS 4103675 4104475 . - 0 ID=CDS:Rv3664c;Parent=transcript:Rv3664c;protein_id=Rv3664c ### -Chromosome ena gene 4104531 4105457 . - . ID=gene:Rv3665c;Name=dppB;biotype=protein_coding;description=Probable dipeptide-transport integral membrane protein ABC transporter DppB;gene_id=Rv3665c;logic_name=ena +Chromosome ena gene 4104531 4105457 . - . ID=gene:Rv3665c;Name=dppB;biotype=protein_coding;description=Probable dipeptide-transport integral membrane protein ABC transporter DppB;gene_id=Rv3665c;logic_name=ena Chromosome ena mRNA 4104531 4105457 . - . ID=transcript:Rv3665c;Parent=gene:Rv3665c;Name=dppB-1;biotype=protein_coding;transcript_id=Rv3665c Chromosome ena exon 4104531 4105457 . - . Parent=transcript:Rv3665c;Name=Rv3665c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3665c-1;rank=1 Chromosome ena CDS 4104531 4105457 . - 0 ID=CDS:Rv3665c;Parent=transcript:Rv3665c;protein_id=Rv3665c ### -Chromosome ena gene 4105459 4107084 . - . ID=gene:Rv3666c;Name=dppA;biotype=protein_coding;description=Probable periplasmic dipeptide-binding lipoprotein DppA;gene_id=Rv3666c;logic_name=ena +Chromosome ena gene 4105459 4107084 . - . ID=gene:Rv3666c;Name=dppA;biotype=protein_coding;description=Probable periplasmic dipeptide-binding lipoprotein DppA;gene_id=Rv3666c;logic_name=ena Chromosome ena mRNA 4105459 4107084 . - . ID=transcript:Rv3666c;Parent=gene:Rv3666c;Name=dppA-1;biotype=protein_coding;transcript_id=Rv3666c Chromosome ena exon 4105459 4107084 . - . Parent=transcript:Rv3666c;Name=Rv3666c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3666c-1;rank=1 Chromosome ena CDS 4105459 4107084 . - 0 ID=CDS:Rv3666c;Parent=transcript:Rv3666c;protein_id=Rv3666c ### -Chromosome ena gene 4107792 4109747 . + . ID=gene:Rv3667;Name=acs;biotype=protein_coding;description=Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase);gene_id=Rv3667;logic_name=ena +Chromosome ena gene 4107792 4109747 . + . ID=gene:Rv3667;Name=acs;biotype=protein_coding;description=Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase);gene_id=Rv3667;logic_name=ena Chromosome ena mRNA 4107792 4109747 . + . ID=transcript:Rv3667;Parent=gene:Rv3667;Name=acs-1;biotype=protein_coding;transcript_id=Rv3667 Chromosome ena exon 4107792 4109747 . + . Parent=transcript:Rv3667;Name=Rv3667-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3667-1;rank=1 Chromosome ena CDS 4107792 4109747 . + 0 ID=CDS:Rv3667;Parent=transcript:Rv3667;protein_id=Rv3667 ### -Chromosome ena gene 4109783 4110481 . - . ID=gene:Rv3668c;biotype=protein_coding;description=Possible protease;gene_id=Rv3668c;logic_name=ena +Chromosome ena gene 4109783 4110481 . - . ID=gene:Rv3668c;biotype=protein_coding;description=Possible protease;gene_id=Rv3668c;logic_name=ena Chromosome ena mRNA 4109783 4110481 . - . ID=transcript:Rv3668c;Parent=gene:Rv3668c;biotype=protein_coding;transcript_id=Rv3668c Chromosome ena exon 4109783 4110481 . - . Parent=transcript:Rv3668c;Name=Rv3668c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3668c-1;rank=1 Chromosome ena CDS 4109783 4110481 . - 0 ID=CDS:Rv3668c;Parent=transcript:Rv3668c;protein_id=Rv3668c ### -Chromosome ena gene 4110827 4111345 . + . ID=gene:Rv3669;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3669;logic_name=ena +Chromosome ena gene 4110827 4111345 . + . ID=gene:Rv3669;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3669;logic_name=ena Chromosome ena mRNA 4110827 4111345 . + . ID=transcript:Rv3669;Parent=gene:Rv3669;biotype=protein_coding;transcript_id=Rv3669 Chromosome ena exon 4110827 4111345 . + . Parent=transcript:Rv3669;Name=Rv3669-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3669-1;rank=1 Chromosome ena CDS 4110827 4111345 . + 0 ID=CDS:Rv3669;Parent=transcript:Rv3669;protein_id=Rv3669 ### -Chromosome ena gene 4111346 4112329 . + . ID=gene:Rv3670;Name=ephE;biotype=protein_coding;description=Possible epoxide hydrolase EphE (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3670;logic_name=ena +Chromosome ena gene 4111346 4112329 . + . ID=gene:Rv3670;Name=ephE;biotype=protein_coding;description=Possible epoxide hydrolase EphE (epoxide hydratase) (arene-oxide hydratase);gene_id=Rv3670;logic_name=ena Chromosome ena mRNA 4111346 4112329 . + . ID=transcript:Rv3670;Parent=gene:Rv3670;Name=ephE-1;biotype=protein_coding;transcript_id=Rv3670 Chromosome ena exon 4111346 4112329 . + . Parent=transcript:Rv3670;Name=Rv3670-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3670-1;rank=1 Chromosome ena CDS 4111346 4112329 . + 0 ID=CDS:Rv3670;Parent=transcript:Rv3670;protein_id=Rv3670 ### -Chromosome ena gene 4112322 4113515 . - . ID=gene:Rv3671c;biotype=protein_coding;description=Membrane-associated serine protease;gene_id=Rv3671c;logic_name=ena +Chromosome ena gene 4112322 4113515 . - . ID=gene:Rv3671c;biotype=protein_coding;description=Membrane-associated serine protease;gene_id=Rv3671c;logic_name=ena Chromosome ena mRNA 4112322 4113515 . - . ID=transcript:Rv3671c;Parent=gene:Rv3671c;biotype=protein_coding;transcript_id=Rv3671c Chromosome ena exon 4112322 4113515 . - . Parent=transcript:Rv3671c;Name=Rv3671c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3671c-1;rank=1 Chromosome ena CDS 4112322 4113515 . - 0 ID=CDS:Rv3671c;Parent=transcript:Rv3671c;protein_id=Rv3671c ### -Chromosome ena gene 4113521 4114342 . - . ID=gene:Rv3672c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3672c;logic_name=ena +Chromosome ena gene 4113521 4114342 . - . ID=gene:Rv3672c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3672c;logic_name=ena Chromosome ena mRNA 4113521 4114342 . - . ID=transcript:Rv3672c;Parent=gene:Rv3672c;biotype=protein_coding;transcript_id=Rv3672c Chromosome ena exon 4113521 4114342 . - . Parent=transcript:Rv3672c;Name=Rv3672c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3672c-1;rank=1 Chromosome ena CDS 4113521 4114342 . - 0 ID=CDS:Rv3672c;Parent=transcript:Rv3672c;protein_id=Rv3672c ### -Chromosome ena gene 4114474 4115157 . - . ID=gene:Rv3673c;biotype=protein_coding;description=Possible membrane-anchored thioredoxin-like protein (thiol-disulfide interchange related protein);gene_id=Rv3673c;logic_name=ena +Chromosome ena gene 4114474 4115157 . - . ID=gene:Rv3673c;biotype=protein_coding;description=Possible membrane-anchored thioredoxin-like protein (thiol-disulfide interchange related protein);gene_id=Rv3673c;logic_name=ena Chromosome ena mRNA 4114474 4115157 . - . ID=transcript:Rv3673c;Parent=gene:Rv3673c;biotype=protein_coding;transcript_id=Rv3673c Chromosome ena exon 4114474 4115157 . - . Parent=transcript:Rv3673c;Name=Rv3673c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3673c-1;rank=1 Chromosome ena CDS 4114474 4115157 . - 0 ID=CDS:Rv3673c;Parent=transcript:Rv3673c;protein_id=Rv3673c ### -Chromosome ena gene 4115157 4115894 . - . ID=gene:Rv3674c;Name=nth;biotype=protein_coding;description=Probable endonuclease III Nth (DNA-(apurinic or apyrimidinic site)lyase) (AP lyase) (AP endonuclease class I) (endodeoxyribonuclease (apurinic or apyrimidinic)) (deoxyribonuclease (apurinic or apyrimidinic));gene_id=Rv3674c;logic_name=ena +Chromosome ena gene 4115157 4115894 . - . ID=gene:Rv3674c;Name=nth;biotype=protein_coding;description=Probable endonuclease III Nth (DNA-(apurinic or apyrimidinic site)lyase) (AP lyase) (AP endonuclease class I) (endodeoxyribonuclease (apurinic or apyrimidinic)) (deoxyribonuclease (apurinic or apyrimidinic));gene_id=Rv3674c;logic_name=ena Chromosome ena mRNA 4115157 4115894 . - . ID=transcript:Rv3674c;Parent=gene:Rv3674c;Name=nth-1;biotype=protein_coding;transcript_id=Rv3674c Chromosome ena exon 4115157 4115894 . - . Parent=transcript:Rv3674c;Name=Rv3674c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3674c-1;rank=1 Chromosome ena CDS 4115157 4115894 . - 0 ID=CDS:Rv3674c;Parent=transcript:Rv3674c;protein_id=Rv3674c ### -Chromosome ena gene 4116002 4116379 . + . ID=gene:Rv3675;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3675;logic_name=ena +Chromosome ena gene 4116002 4116379 . + . ID=gene:Rv3675;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3675;logic_name=ena Chromosome ena mRNA 4116002 4116379 . + . ID=transcript:Rv3675;Parent=gene:Rv3675;biotype=protein_coding;transcript_id=Rv3675 Chromosome ena exon 4116002 4116379 . + . Parent=transcript:Rv3675;Name=Rv3675-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3675-1;rank=1 Chromosome ena CDS 4116002 4116379 . + 0 ID=CDS:Rv3675;Parent=transcript:Rv3675;protein_id=Rv3675 ### -Chromosome ena gene 4116478 4117152 . + . ID=gene:Rv3676;Name=crp;biotype=protein_coding;description=Transcriptional regulatory protein Crp (Crp/Fnr-family);gene_id=Rv3676;logic_name=ena +Chromosome ena gene 4116478 4117152 . + . ID=gene:Rv3676;Name=crp;biotype=protein_coding;description=Transcriptional regulatory protein Crp (Crp/Fnr-family);gene_id=Rv3676;logic_name=ena Chromosome ena mRNA 4116478 4117152 . + . ID=transcript:Rv3676;Parent=gene:Rv3676;Name=crp-1;biotype=protein_coding;transcript_id=Rv3676 Chromosome ena exon 4116478 4117152 . + . Parent=transcript:Rv3676;Name=Rv3676-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3676-1;rank=1 Chromosome ena CDS 4116478 4117152 . + 0 ID=CDS:Rv3676;Parent=transcript:Rv3676;protein_id=Rv3676 ### -Chromosome ena gene 4117258 4118052 . - . ID=gene:Rv3677c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3677c;logic_name=ena +Chromosome ena gene 4117258 4118052 . - . ID=gene:Rv3677c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3677c;logic_name=ena Chromosome ena mRNA 4117258 4118052 . - . ID=transcript:Rv3677c;Parent=gene:Rv3677c;biotype=protein_coding;transcript_id=Rv3677c Chromosome ena exon 4117258 4118052 . - . Parent=transcript:Rv3677c;Name=Rv3677c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3677c-1;rank=1 Chromosome ena CDS 4117258 4118052 . - 0 ID=CDS:Rv3677c;Parent=transcript:Rv3677c;protein_id=Rv3677c ### -Chromosome ena gene 4118059 4118514 . - . ID=gene:Rv3678c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3678c;logic_name=ena +Chromosome ena gene 4118059 4118514 . - . ID=gene:Rv3678c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3678c;logic_name=ena Chromosome ena mRNA 4118059 4118514 . - . ID=transcript:Rv3678c;Parent=gene:Rv3678c;biotype=protein_coding;transcript_id=Rv3678c Chromosome ena exon 4118059 4118514 . - . Parent=transcript:Rv3678c;Name=Rv3678c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3678c-1;rank=1 Chromosome ena CDS 4118059 4118514 . - 0 ID=CDS:Rv3678c;Parent=transcript:Rv3678c;protein_id=Rv3678c ### -Chromosome ena gene 4118530 4118691 . - . ID=gene:Rv3678A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3678A;logic_name=ena +Chromosome ena gene 4118530 4118691 . - . ID=gene:Rv3678A;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3678A;logic_name=ena Chromosome ena mRNA 4118530 4118691 . - . ID=transcript:Rv3678A;Parent=gene:Rv3678A;biotype=protein_coding;transcript_id=Rv3678A Chromosome ena exon 4118530 4118691 . - . Parent=transcript:Rv3678A;Name=Rv3678A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3678A-1;rank=1 Chromosome ena CDS 4118530 4118691 . - 0 ID=CDS:Rv3678A;Parent=transcript:Rv3678A;protein_id=Rv3678A ### -Chromosome ena gene 4118776 4119798 . + . ID=gene:Rv3679;biotype=protein_coding;description=Probable anion transporter ATPase;gene_id=Rv3679;logic_name=ena +Chromosome ena gene 4118776 4119798 . + . ID=gene:Rv3679;biotype=protein_coding;description=Probable anion transporter ATPase;gene_id=Rv3679;logic_name=ena Chromosome ena mRNA 4118776 4119798 . + . ID=transcript:Rv3679;Parent=gene:Rv3679;biotype=protein_coding;transcript_id=Rv3679 Chromosome ena exon 4118776 4119798 . + . Parent=transcript:Rv3679;Name=Rv3679-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3679-1;rank=1 Chromosome ena CDS 4118776 4119798 . + 0 ID=CDS:Rv3679;Parent=transcript:Rv3679;protein_id=Rv3679 ### -Chromosome ena gene 4119795 4120955 . + . ID=gene:Rv3680;biotype=protein_coding;description=Probable anion transporter ATPase;gene_id=Rv3680;logic_name=ena +Chromosome ena gene 4119795 4120955 . + . ID=gene:Rv3680;biotype=protein_coding;description=Probable anion transporter ATPase;gene_id=Rv3680;logic_name=ena Chromosome ena mRNA 4119795 4120955 . + . ID=transcript:Rv3680;Parent=gene:Rv3680;biotype=protein_coding;transcript_id=Rv3680 Chromosome ena exon 4119795 4120955 . + . Parent=transcript:Rv3680;Name=Rv3680-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3680-1;rank=1 Chromosome ena CDS 4119795 4120955 . + 0 ID=CDS:Rv3680;Parent=transcript:Rv3680;protein_id=Rv3680 ### -Chromosome ena gene 4121198 4121554 . - . ID=gene:Rv3681c;Name=whiB4;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB4;gene_id=Rv3681c;logic_name=ena +Chromosome ena gene 4121198 4121554 . - . ID=gene:Rv3681c;Name=whiB4;biotype=protein_coding;description=Probable transcriptional regulatory protein WhiB-like WhiB4;gene_id=Rv3681c;logic_name=ena Chromosome ena mRNA 4121198 4121554 . - . ID=transcript:Rv3681c;Parent=gene:Rv3681c;Name=whiB4-1;biotype=protein_coding;transcript_id=Rv3681c Chromosome ena exon 4121198 4121554 . - . Parent=transcript:Rv3681c;Name=Rv3681c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3681c-1;rank=1 Chromosome ena CDS 4121198 4121554 . - 0 ID=CDS:Rv3681c;Parent=transcript:Rv3681c;protein_id=Rv3681c ### -Chromosome ena gene 4121916 4124348 . + . ID=gene:Rv3682;Name=ponA2;biotype=protein_coding;description=Probable bifunctional membrane-associated penicillin-binding protein 1A/1B PonA2 (murein polymerase) [includes: penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase)];gene_id=Rv3682;logic_name=ena +Chromosome ena gene 4121916 4124348 . + . ID=gene:Rv3682;Name=ponA2;biotype=protein_coding;description=Probable bifunctional membrane-associated penicillin-binding protein 1A/1B PonA2 (murein polymerase) [includes: penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase)];gene_id=Rv3682;logic_name=ena Chromosome ena mRNA 4121916 4124348 . + . ID=transcript:Rv3682;Parent=gene:Rv3682;Name=ponA2-1;biotype=protein_coding;transcript_id=Rv3682 Chromosome ena exon 4121916 4124348 . + . Parent=transcript:Rv3682;Name=Rv3682-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3682-1;rank=1 Chromosome ena CDS 4121916 4124348 . + 0 ID=CDS:Rv3682;Parent=transcript:Rv3682;protein_id=Rv3682 ### -Chromosome ena gene 4124417 4125376 . + . ID=gene:Rv3683;biotype=protein_coding;description=Conserved protein;gene_id=Rv3683;logic_name=ena +Chromosome ena gene 4124417 4125376 . + . ID=gene:Rv3683;biotype=protein_coding;description=Conserved protein;gene_id=Rv3683;logic_name=ena Chromosome ena mRNA 4124417 4125376 . + . ID=transcript:Rv3683;Parent=gene:Rv3683;biotype=protein_coding;transcript_id=Rv3683 Chromosome ena exon 4124417 4125376 . + . Parent=transcript:Rv3683;Name=Rv3683-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3683-1;rank=1 Chromosome ena CDS 4124417 4125376 . + 0 ID=CDS:Rv3683;Parent=transcript:Rv3683;protein_id=Rv3683 ### -Chromosome ena gene 4125439 4126479 . + . ID=gene:Rv3684;biotype=protein_coding;description=Probable lyase;gene_id=Rv3684;logic_name=ena +Chromosome ena gene 4125439 4126479 . + . ID=gene:Rv3684;biotype=protein_coding;description=Probable lyase;gene_id=Rv3684;logic_name=ena Chromosome ena mRNA 4125439 4126479 . + . ID=transcript:Rv3684;Parent=gene:Rv3684;biotype=protein_coding;transcript_id=Rv3684 Chromosome ena exon 4125439 4126479 . + . Parent=transcript:Rv3684;Name=Rv3684-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3684-1;rank=1 Chromosome ena CDS 4125439 4126479 . + 0 ID=CDS:Rv3684;Parent=transcript:Rv3684;protein_id=Rv3684 @@ -19333,202 +19333,202 @@ Chromosome ena transcript 4126541 4126614 . + . ID=transcript:EBG00000313355;Par Chromosome ena exon 4126541 4126614 . + . Parent=transcript:EBG00000313355;Name=EBG00000313355;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313355;rank=1 ### Chromosome ena_gene biological_region 4126541 4126614 . + . external_name=AL123456.3:gene:4126541..4126614;logic_name=ena_gene -Chromosome ena gene 4127295 4128725 . - . ID=gene:Rv3685c;Name=cyp137;biotype=protein_coding;description=Probable cytochrome P450 137 Cyp137;gene_id=Rv3685c;logic_name=ena +Chromosome ena gene 4127295 4128725 . - . ID=gene:Rv3685c;Name=cyp137;biotype=protein_coding;description=Probable cytochrome P450 137 Cyp137;gene_id=Rv3685c;logic_name=ena Chromosome ena mRNA 4127295 4128725 . - . ID=transcript:Rv3685c;Parent=gene:Rv3685c;Name=cyp137-1;biotype=protein_coding;transcript_id=Rv3685c Chromosome ena exon 4127295 4128725 . - . Parent=transcript:Rv3685c;Name=Rv3685c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3685c-1;rank=1 Chromosome ena CDS 4127295 4128725 . - 0 ID=CDS:Rv3685c;Parent=transcript:Rv3685c;protein_id=Rv3685c ### -Chromosome ena gene 4128751 4129083 . - . ID=gene:Rv3686c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3686c;logic_name=ena +Chromosome ena gene 4128751 4129083 . - . ID=gene:Rv3686c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3686c;logic_name=ena Chromosome ena mRNA 4128751 4129083 . - . ID=transcript:Rv3686c;Parent=gene:Rv3686c;biotype=protein_coding;transcript_id=Rv3686c Chromosome ena exon 4128751 4129083 . - . Parent=transcript:Rv3686c;Name=Rv3686c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3686c-1;rank=1 Chromosome ena CDS 4128751 4129083 . - 0 ID=CDS:Rv3686c;Parent=transcript:Rv3686c;protein_id=Rv3686c ### -Chromosome ena gene 4129323 4129691 . - . ID=gene:Rv3687c;Name=rsfB;biotype=protein_coding;description=Anti-anti-sigma factor RsfB (anti-sigma factor antagonist) (regulator of sigma F B);gene_id=Rv3687c;logic_name=ena +Chromosome ena gene 4129323 4129691 . - . ID=gene:Rv3687c;Name=rsfB;biotype=protein_coding;description=Anti-anti-sigma factor RsfB (anti-sigma factor antagonist) (regulator of sigma F B);gene_id=Rv3687c;logic_name=ena Chromosome ena mRNA 4129323 4129691 . - . ID=transcript:Rv3687c;Parent=gene:Rv3687c;Name=rsfB-1;biotype=protein_coding;transcript_id=Rv3687c Chromosome ena exon 4129323 4129691 . - . Parent=transcript:Rv3687c;Name=Rv3687c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3687c-1;rank=1 Chromosome ena CDS 4129323 4129691 . - 0 ID=CDS:Rv3687c;Parent=transcript:Rv3687c;protein_id=Rv3687c ### -Chromosome ena gene 4129893 4130357 . - . ID=gene:Rv3688c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3688c;logic_name=ena +Chromosome ena gene 4129893 4130357 . - . ID=gene:Rv3688c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3688c;logic_name=ena Chromosome ena mRNA 4129893 4130357 . - . ID=transcript:Rv3688c;Parent=gene:Rv3688c;biotype=protein_coding;transcript_id=Rv3688c Chromosome ena exon 4129893 4130357 . - . Parent=transcript:Rv3688c;Name=Rv3688c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3688c-1;rank=1 Chromosome ena CDS 4129893 4130357 . - 0 ID=CDS:Rv3688c;Parent=transcript:Rv3688c;protein_id=Rv3688c ### -Chromosome ena gene 4130357 4131712 . + . ID=gene:Rv3689;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3689;logic_name=ena +Chromosome ena gene 4130357 4131712 . + . ID=gene:Rv3689;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3689;logic_name=ena Chromosome ena mRNA 4130357 4131712 . + . ID=transcript:Rv3689;Parent=gene:Rv3689;biotype=protein_coding;transcript_id=Rv3689 Chromosome ena exon 4130357 4131712 . + . Parent=transcript:Rv3689;Name=Rv3689-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3689-1;rank=1 Chromosome ena CDS 4130357 4131712 . + 0 ID=CDS:Rv3689;Parent=transcript:Rv3689;protein_id=Rv3689 ### -Chromosome ena gene 4131739 4132392 . + . ID=gene:Rv3690;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3690;logic_name=ena +Chromosome ena gene 4131739 4132392 . + . ID=gene:Rv3690;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3690;logic_name=ena Chromosome ena mRNA 4131739 4132392 . + . ID=transcript:Rv3690;Parent=gene:Rv3690;biotype=protein_coding;transcript_id=Rv3690 Chromosome ena exon 4131739 4132392 . + . Parent=transcript:Rv3690;Name=Rv3690-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3690-1;rank=1 Chromosome ena CDS 4131739 4132392 . + 0 ID=CDS:Rv3690;Parent=transcript:Rv3690;protein_id=Rv3690 ### -Chromosome ena gene 4132518 4133519 . + . ID=gene:Rv3691;biotype=protein_coding;description=Conserved protein;gene_id=Rv3691;logic_name=ena +Chromosome ena gene 4132518 4133519 . + . ID=gene:Rv3691;biotype=protein_coding;description=Conserved protein;gene_id=Rv3691;logic_name=ena Chromosome ena mRNA 4132518 4133519 . + . ID=transcript:Rv3691;Parent=gene:Rv3691;biotype=protein_coding;transcript_id=Rv3691 Chromosome ena exon 4132518 4133519 . + . Parent=transcript:Rv3691;Name=Rv3691-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3691-1;rank=1 Chromosome ena CDS 4132518 4133519 . + 0 ID=CDS:Rv3691;Parent=transcript:Rv3691;protein_id=Rv3691 ### -Chromosome ena gene 4133516 4134592 . + . ID=gene:Rv3692;Name=moxR2;biotype=protein_coding;description=Probable methanol dehydrogenase transcriptional regulatory protein MoxR2;gene_id=Rv3692;logic_name=ena +Chromosome ena gene 4133516 4134592 . + . ID=gene:Rv3692;Name=moxR2;biotype=protein_coding;description=Probable methanol dehydrogenase transcriptional regulatory protein MoxR2;gene_id=Rv3692;logic_name=ena Chromosome ena mRNA 4133516 4134592 . + . ID=transcript:Rv3692;Parent=gene:Rv3692;Name=moxR2-1;biotype=protein_coding;transcript_id=Rv3692 Chromosome ena exon 4133516 4134592 . + . Parent=transcript:Rv3692;Name=Rv3692-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3692-1;rank=1 Chromosome ena CDS 4133516 4134592 . + 0 ID=CDS:Rv3692;Parent=transcript:Rv3692;protein_id=Rv3692 ### -Chromosome ena gene 4134726 4136048 . + . ID=gene:Rv3693;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3693;logic_name=ena +Chromosome ena gene 4134726 4136048 . + . ID=gene:Rv3693;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3693;logic_name=ena Chromosome ena mRNA 4134726 4136048 . + . ID=transcript:Rv3693;Parent=gene:Rv3693;biotype=protein_coding;transcript_id=Rv3693 Chromosome ena exon 4134726 4136048 . + . Parent=transcript:Rv3693;Name=Rv3693-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3693-1;rank=1 Chromosome ena CDS 4134726 4136048 . + 0 ID=CDS:Rv3693;Parent=transcript:Rv3693;protein_id=Rv3693 ### -Chromosome ena gene 4136122 4137114 . - . ID=gene:Rv3694c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3694c;logic_name=ena +Chromosome ena gene 4136122 4137114 . - . ID=gene:Rv3694c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3694c;logic_name=ena Chromosome ena mRNA 4136122 4137114 . - . ID=transcript:Rv3694c;Parent=gene:Rv3694c;biotype=protein_coding;transcript_id=Rv3694c Chromosome ena exon 4136122 4137114 . - . Parent=transcript:Rv3694c;Name=Rv3694c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3694c-1;rank=1 Chromosome ena CDS 4136122 4137114 . - 0 ID=CDS:Rv3694c;Parent=transcript:Rv3694c;protein_id=Rv3694c ### -Chromosome ena gene 4137206 4138138 . + . ID=gene:Rv3695;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3695;logic_name=ena +Chromosome ena gene 4137206 4138138 . + . ID=gene:Rv3695;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3695;logic_name=ena Chromosome ena mRNA 4137206 4138138 . + . ID=transcript:Rv3695;Parent=gene:Rv3695;biotype=protein_coding;transcript_id=Rv3695 Chromosome ena exon 4137206 4138138 . + . Parent=transcript:Rv3695;Name=Rv3695-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3695-1;rank=1 Chromosome ena CDS 4137206 4138138 . + 0 ID=CDS:Rv3695;Parent=transcript:Rv3695;protein_id=Rv3695 ### -Chromosome ena gene 4138202 4139755 . - . ID=gene:Rv3696c;Name=glpK;biotype=protein_coding;description=Probable glycerol kinase GlpK (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK);gene_id=Rv3696c;logic_name=ena +Chromosome ena gene 4138202 4139755 . - . ID=gene:Rv3696c;Name=glpK;biotype=protein_coding;description=Probable glycerol kinase GlpK (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK);gene_id=Rv3696c;logic_name=ena Chromosome ena mRNA 4138202 4139755 . - . ID=transcript:Rv3696c;Parent=gene:Rv3696c;Name=glpK-1;biotype=protein_coding;transcript_id=Rv3696c Chromosome ena exon 4138202 4139755 . - . Parent=transcript:Rv3696c;Name=Rv3696c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3696c-1;rank=1 Chromosome ena CDS 4138202 4139755 . - 0 ID=CDS:Rv3696c;Parent=transcript:Rv3696c;protein_id=Rv3696c ### -Chromosome ena gene 4139805 4140242 . - . ID=gene:Rv3697c;Name=vapC48;biotype=protein_coding;description=Possible toxin VapC48. Contains PIN domain.;gene_id=Rv3697c;logic_name=ena +Chromosome ena gene 4139805 4140242 . - . ID=gene:Rv3697c;Name=vapC48;biotype=protein_coding;description=Possible toxin VapC48. Contains PIN domain.;gene_id=Rv3697c;logic_name=ena Chromosome ena mRNA 4139805 4140242 . - . ID=transcript:Rv3697c;Parent=gene:Rv3697c;Name=vapC48-1;biotype=protein_coding;transcript_id=Rv3697c Chromosome ena exon 4139805 4140242 . - . Parent=transcript:Rv3697c;Name=Rv3697c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3697c-1;rank=1 Chromosome ena CDS 4139805 4140242 . - 0 ID=CDS:Rv3697c;Parent=transcript:Rv3697c;protein_id=Rv3697c ### -Chromosome ena gene 4140239 4140463 . - . ID=gene:Rv3697A;Name=vapB48;biotype=protein_coding;description=Possible antitoxin VapB48;gene_id=Rv3697A;logic_name=ena +Chromosome ena gene 4140239 4140463 . - . ID=gene:Rv3697A;Name=vapB48;biotype=protein_coding;description=Possible antitoxin VapB48;gene_id=Rv3697A;logic_name=ena Chromosome ena mRNA 4140239 4140463 . - . ID=transcript:Rv3697A;Parent=gene:Rv3697A;Name=vapB48-1;biotype=protein_coding;transcript_id=Rv3697A Chromosome ena exon 4140239 4140463 . - . Parent=transcript:Rv3697A;Name=Rv3697A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3697A-1;rank=1 Chromosome ena CDS 4140239 4140463 . - 0 ID=CDS:Rv3697A;Parent=transcript:Rv3697A;protein_id=Rv3697A ### -Chromosome ena gene 4140493 4142022 . + . ID=gene:Rv3698;biotype=protein_coding;description=Conserved protein;gene_id=Rv3698;logic_name=ena +Chromosome ena gene 4140493 4142022 . + . ID=gene:Rv3698;biotype=protein_coding;description=Conserved protein;gene_id=Rv3698;logic_name=ena Chromosome ena mRNA 4140493 4142022 . + . ID=transcript:Rv3698;Parent=gene:Rv3698;biotype=protein_coding;transcript_id=Rv3698 Chromosome ena exon 4140493 4142022 . + . Parent=transcript:Rv3698;Name=Rv3698-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3698-1;rank=1 Chromosome ena CDS 4140493 4142022 . + 0 ID=CDS:Rv3698;Parent=transcript:Rv3698;protein_id=Rv3698 ### -Chromosome ena gene 4142044 4142745 . + . ID=gene:Rv3699;biotype=protein_coding;description=Conserved protein;gene_id=Rv3699;logic_name=ena +Chromosome ena gene 4142044 4142745 . + . ID=gene:Rv3699;biotype=protein_coding;description=Conserved protein;gene_id=Rv3699;logic_name=ena Chromosome ena mRNA 4142044 4142745 . + . ID=transcript:Rv3699;Parent=gene:Rv3699;biotype=protein_coding;transcript_id=Rv3699 Chromosome ena exon 4142044 4142745 . + . Parent=transcript:Rv3699;Name=Rv3699-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3699-1;rank=1 Chromosome ena CDS 4142044 4142745 . + 0 ID=CDS:Rv3699;Parent=transcript:Rv3699;protein_id=Rv3699 ### -Chromosome ena gene 4142748 4143920 . - . ID=gene:Rv3700c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3700c;logic_name=ena +Chromosome ena gene 4142748 4143920 . - . ID=gene:Rv3700c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3700c;logic_name=ena Chromosome ena mRNA 4142748 4143920 . - . ID=transcript:Rv3700c;Parent=gene:Rv3700c;biotype=protein_coding;transcript_id=Rv3700c Chromosome ena exon 4142748 4143920 . - . Parent=transcript:Rv3700c;Name=Rv3700c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3700c-1;rank=1 Chromosome ena CDS 4142748 4143920 . - 0 ID=CDS:Rv3700c;Parent=transcript:Rv3700c;protein_id=Rv3700c ### -Chromosome ena gene 4143951 4144916 . - . ID=gene:Rv3701c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3701c;logic_name=ena +Chromosome ena gene 4143951 4144916 . - . ID=gene:Rv3701c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3701c;logic_name=ena Chromosome ena mRNA 4143951 4144916 . - . ID=transcript:Rv3701c;Parent=gene:Rv3701c;biotype=protein_coding;transcript_id=Rv3701c Chromosome ena exon 4143951 4144916 . - . Parent=transcript:Rv3701c;Name=Rv3701c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3701c-1;rank=1 Chromosome ena CDS 4143951 4144916 . - 0 ID=CDS:Rv3701c;Parent=transcript:Rv3701c;protein_id=Rv3701c ### -Chromosome ena gene 4144913 4145614 . - . ID=gene:Rv3702c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3702c;logic_name=ena +Chromosome ena gene 4144913 4145614 . - . ID=gene:Rv3702c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3702c;logic_name=ena Chromosome ena mRNA 4144913 4145614 . - . ID=transcript:Rv3702c;Parent=gene:Rv3702c;biotype=protein_coding;transcript_id=Rv3702c Chromosome ena exon 4144913 4145614 . - . Parent=transcript:Rv3702c;Name=Rv3702c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3702c-1;rank=1 Chromosome ena CDS 4144913 4145614 . - 0 ID=CDS:Rv3702c;Parent=transcript:Rv3702c;protein_id=Rv3702c ### -Chromosome ena gene 4145614 4146891 . - . ID=gene:Rv3703c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3703c;logic_name=ena +Chromosome ena gene 4145614 4146891 . - . ID=gene:Rv3703c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3703c;logic_name=ena Chromosome ena mRNA 4145614 4146891 . - . ID=transcript:Rv3703c;Parent=gene:Rv3703c;biotype=protein_coding;transcript_id=Rv3703c Chromosome ena exon 4145614 4146891 . - . Parent=transcript:Rv3703c;Name=Rv3703c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3703c-1;rank=1 Chromosome ena CDS 4145614 4146891 . - 0 ID=CDS:Rv3703c;Parent=transcript:Rv3703c;protein_id=Rv3703c ### -Chromosome ena gene 4146888 4148186 . - . ID=gene:Rv3704c;Name=gshA;biotype=protein_coding;description=Glutamate--cysteine ligase GshA (gamma-glutamylcysteine synthetase) (gamma-ECS) (GCS) (gamma-glutamyl-L-cysteine synthetase);gene_id=Rv3704c;logic_name=ena +Chromosome ena gene 4146888 4148186 . - . ID=gene:Rv3704c;Name=gshA;biotype=protein_coding;description=Glutamate--cysteine ligase GshA (gamma-glutamylcysteine synthetase) (gamma-ECS) (GCS) (gamma-glutamyl-L-cysteine synthetase);gene_id=Rv3704c;logic_name=ena Chromosome ena mRNA 4146888 4148186 . - . ID=transcript:Rv3704c;Parent=gene:Rv3704c;Name=gshA-1;biotype=protein_coding;transcript_id=Rv3704c Chromosome ena exon 4146888 4148186 . - . Parent=transcript:Rv3704c;Name=Rv3704c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3704c-1;rank=1 Chromosome ena CDS 4146888 4148186 . - 0 ID=CDS:Rv3704c;Parent=transcript:Rv3704c;protein_id=Rv3704c ### -Chromosome ena gene 4148318 4148962 . - . ID=gene:Rv3705c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3705c;logic_name=ena +Chromosome ena gene 4148318 4148962 . - . ID=gene:Rv3705c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3705c;logic_name=ena Chromosome ena mRNA 4148318 4148962 . - . ID=transcript:Rv3705c;Parent=gene:Rv3705c;biotype=protein_coding;transcript_id=Rv3705c Chromosome ena exon 4148318 4148962 . - . Parent=transcript:Rv3705c;Name=Rv3705c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3705c-1;rank=1 Chromosome ena CDS 4148318 4148962 . - 0 ID=CDS:Rv3705c;Parent=transcript:Rv3705c;protein_id=Rv3705c ### -Chromosome ena gene 4149091 4149480 . - . ID=gene:Rv3705A;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv3705A;logic_name=ena +Chromosome ena gene 4149091 4149480 . - . ID=gene:Rv3705A;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv3705A;logic_name=ena Chromosome ena mRNA 4149091 4149480 . - . ID=transcript:Rv3705A;Parent=gene:Rv3705A;biotype=protein_coding;transcript_id=Rv3705A Chromosome ena exon 4149091 4149480 . - . Parent=transcript:Rv3705A;Name=Rv3705A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3705A-1;rank=1 Chromosome ena CDS 4149091 4149480 . - 0 ID=CDS:Rv3705A;Parent=transcript:Rv3705A;protein_id=Rv3705A ### -Chromosome ena gene 4149591 4149911 . - . ID=gene:Rv3706c;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv3706c;logic_name=ena +Chromosome ena gene 4149591 4149911 . - . ID=gene:Rv3706c;biotype=protein_coding;description=Conserved hypothetical proline rich protein;gene_id=Rv3706c;logic_name=ena Chromosome ena mRNA 4149591 4149911 . - . ID=transcript:Rv3706c;Parent=gene:Rv3706c;biotype=protein_coding;transcript_id=Rv3706c Chromosome ena exon 4149591 4149911 . - . Parent=transcript:Rv3706c;Name=Rv3706c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3706c-1;rank=1 Chromosome ena CDS 4149591 4149911 . - 0 ID=CDS:Rv3706c;Parent=transcript:Rv3706c;protein_id=Rv3706c ### -Chromosome ena gene 4150030 4151040 . - . ID=gene:Rv3707c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3707c;logic_name=ena +Chromosome ena gene 4150030 4151040 . - . ID=gene:Rv3707c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3707c;logic_name=ena Chromosome ena mRNA 4150030 4151040 . - . ID=transcript:Rv3707c;Parent=gene:Rv3707c;biotype=protein_coding;transcript_id=Rv3707c Chromosome ena exon 4150030 4151040 . - . Parent=transcript:Rv3707c;Name=Rv3707c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3707c-1;rank=1 Chromosome ena CDS 4150030 4151040 . - 0 ID=CDS:Rv3707c;Parent=transcript:Rv3707c;protein_id=Rv3707c ### -Chromosome ena gene 4151180 4152217 . - . ID=gene:Rv3708c;Name=asd;biotype=protein_coding;description=Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase);gene_id=Rv3708c;logic_name=ena +Chromosome ena gene 4151180 4152217 . - . ID=gene:Rv3708c;Name=asd;biotype=protein_coding;description=Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase);gene_id=Rv3708c;logic_name=ena Chromosome ena mRNA 4151180 4152217 . - . ID=transcript:Rv3708c;Parent=gene:Rv3708c;Name=asd-1;biotype=protein_coding;transcript_id=Rv3708c Chromosome ena exon 4151180 4152217 . - . Parent=transcript:Rv3708c;Name=Rv3708c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3708c-1;rank=1 Chromosome ena CDS 4151180 4152217 . - 0 ID=CDS:Rv3708c;Parent=transcript:Rv3708c;protein_id=Rv3708c ### -Chromosome ena gene 4152218 4153483 . - . ID=gene:Rv3709c;Name=ask;biotype=protein_coding;description=Aspartokinase Ask (aspartate kinase) [contains: aspartokinase alpha subunit (Ask-alpha)%3B and aspartokinase beta subunit (Ask-beta)];gene_id=Rv3709c;logic_name=ena +Chromosome ena gene 4152218 4153483 . - . ID=gene:Rv3709c;Name=ask;biotype=protein_coding;description=Aspartokinase Ask (aspartate kinase) [contains: aspartokinase alpha subunit (Ask-alpha)%3B and aspartokinase beta subunit (Ask-beta)];gene_id=Rv3709c;logic_name=ena Chromosome ena mRNA 4152218 4153483 . - . ID=transcript:Rv3709c;Parent=gene:Rv3709c;Name=ask-1;biotype=protein_coding;transcript_id=Rv3709c Chromosome ena exon 4152218 4153483 . - . Parent=transcript:Rv3709c;Name=Rv3709c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3709c-1;rank=1 Chromosome ena CDS 4152218 4153483 . - 0 ID=CDS:Rv3709c;Parent=transcript:Rv3709c;protein_id=Rv3709c ### -Chromosome ena gene 4153740 4155674 . + . ID=gene:Rv3710;Name=leuA;biotype=protein_coding;description=2-isopropylmalate synthase LeuA (alpha-isopropylmalate synthase) (alpha-IPM synthetase) (IPMS);gene_id=Rv3710;logic_name=ena +Chromosome ena gene 4153740 4155674 . + . ID=gene:Rv3710;Name=leuA;biotype=protein_coding;description=2-isopropylmalate synthase LeuA (alpha-isopropylmalate synthase) (alpha-IPM synthetase) (IPMS);gene_id=Rv3710;logic_name=ena Chromosome ena mRNA 4153740 4155674 . + . ID=transcript:Rv3710;Parent=gene:Rv3710;Name=leuA-1;biotype=protein_coding;transcript_id=Rv3710 Chromosome ena exon 4153740 4155674 . + . Parent=transcript:Rv3710;Name=Rv3710-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3710-1;rank=1 Chromosome ena CDS 4153740 4155674 . + 0 ID=CDS:Rv3710;Parent=transcript:Rv3710;protein_id=Rv3710 ### -Chromosome ena gene 4155740 4156729 . - . ID=gene:Rv3711c;Name=dnaQ;biotype=protein_coding;description=Probable DNA polymerase III (epsilon subunit) DnaQ;gene_id=Rv3711c;logic_name=ena +Chromosome ena gene 4155740 4156729 . - . ID=gene:Rv3711c;Name=dnaQ;biotype=protein_coding;description=Probable DNA polymerase III (epsilon subunit) DnaQ;gene_id=Rv3711c;logic_name=ena Chromosome ena mRNA 4155740 4156729 . - . ID=transcript:Rv3711c;Parent=gene:Rv3711c;Name=dnaQ-1;biotype=protein_coding;transcript_id=Rv3711c Chromosome ena exon 4155740 4156729 . - . Parent=transcript:Rv3711c;Name=Rv3711c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3711c-1;rank=1 Chromosome ena CDS 4155740 4156729 . - 0 ID=CDS:Rv3711c;Parent=transcript:Rv3711c;protein_id=Rv3711c ### -Chromosome ena gene 4156981 4158222 . + . ID=gene:Rv3712;biotype=protein_coding;description=Possible ligase;gene_id=Rv3712;logic_name=ena +Chromosome ena gene 4156981 4158222 . + . ID=gene:Rv3712;biotype=protein_coding;description=Possible ligase;gene_id=Rv3712;logic_name=ena Chromosome ena mRNA 4156981 4158222 . + . ID=transcript:Rv3712;Parent=gene:Rv3712;biotype=protein_coding;transcript_id=Rv3712 Chromosome ena exon 4156981 4158222 . + . Parent=transcript:Rv3712;Name=Rv3712-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3712-1;rank=1 Chromosome ena CDS 4156981 4158222 . + 0 ID=CDS:Rv3712;Parent=transcript:Rv3712;protein_id=Rv3712 ### -Chromosome ena gene 4158227 4158922 . + . ID=gene:Rv3713;Name=cobQ2;biotype=protein_coding;description=Possible cobyric acid synthase CobQ2;gene_id=Rv3713;logic_name=ena +Chromosome ena gene 4158227 4158922 . + . ID=gene:Rv3713;Name=cobQ2;biotype=protein_coding;description=Possible cobyric acid synthase CobQ2;gene_id=Rv3713;logic_name=ena Chromosome ena mRNA 4158227 4158922 . + . ID=transcript:Rv3713;Parent=gene:Rv3713;Name=cobQ2-1;biotype=protein_coding;transcript_id=Rv3713 Chromosome ena exon 4158227 4158922 . + . Parent=transcript:Rv3713;Name=Rv3713-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3713-1;rank=1 Chromosome ena CDS 4158227 4158922 . + 0 ID=CDS:Rv3713;Parent=transcript:Rv3713;protein_id=Rv3713 ### -Chromosome ena gene 4158931 4159821 . - . ID=gene:Rv3714c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3714c;logic_name=ena +Chromosome ena gene 4158931 4159821 . - . ID=gene:Rv3714c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3714c;logic_name=ena Chromosome ena mRNA 4158931 4159821 . - . ID=transcript:Rv3714c;Parent=gene:Rv3714c;biotype=protein_coding;transcript_id=Rv3714c Chromosome ena exon 4158931 4159821 . - . Parent=transcript:Rv3714c;Name=Rv3714c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3714c-1;rank=1 Chromosome ena CDS 4158931 4159821 . - 0 ID=CDS:Rv3714c;Parent=transcript:Rv3714c;protein_id=Rv3714c ### -Chromosome ena gene 4159889 4160500 . - . ID=gene:Rv3715c;Name=recR;biotype=protein_coding;description=Probable recombination protein RecR;gene_id=Rv3715c;logic_name=ena +Chromosome ena gene 4159889 4160500 . - . ID=gene:Rv3715c;Name=recR;biotype=protein_coding;description=Probable recombination protein RecR;gene_id=Rv3715c;logic_name=ena Chromosome ena mRNA 4159889 4160500 . - . ID=transcript:Rv3715c;Parent=gene:Rv3715c;Name=recR-1;biotype=protein_coding;transcript_id=Rv3715c Chromosome ena exon 4159889 4160500 . - . Parent=transcript:Rv3715c;Name=Rv3715c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3715c-1;rank=1 Chromosome ena CDS 4159889 4160500 . - 0 ID=CDS:Rv3715c;Parent=transcript:Rv3715c;protein_id=Rv3715c ### -Chromosome ena gene 4160512 4160913 . - . ID=gene:Rv3716c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3716c;logic_name=ena +Chromosome ena gene 4160512 4160913 . - . ID=gene:Rv3716c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3716c;logic_name=ena Chromosome ena mRNA 4160512 4160913 . - . ID=transcript:Rv3716c;Parent=gene:Rv3716c;biotype=protein_coding;transcript_id=Rv3716c Chromosome ena exon 4160512 4160913 . - . Parent=transcript:Rv3716c;Name=Rv3716c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3716c-1;rank=1 Chromosome ena CDS 4160512 4160913 . - 0 ID=CDS:Rv3716c;Parent=transcript:Rv3716c;protein_id=Rv3716c ### -Chromosome ena gene 4161048 4161773 . + . ID=gene:Rv3717;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3717;logic_name=ena +Chromosome ena gene 4161048 4161773 . + . ID=gene:Rv3717;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3717;logic_name=ena Chromosome ena mRNA 4161048 4161773 . + . ID=transcript:Rv3717;Parent=gene:Rv3717;biotype=protein_coding;transcript_id=Rv3717 Chromosome ena exon 4161048 4161773 . + . Parent=transcript:Rv3717;Name=Rv3717-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3717-1;rank=1 Chromosome ena CDS 4161048 4161773 . + 0 ID=CDS:Rv3717;Parent=transcript:Rv3717;protein_id=Rv3717 ### -Chromosome ena gene 4161815 4162258 . - . ID=gene:Rv3718c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3718c;logic_name=ena +Chromosome ena gene 4161815 4162258 . - . ID=gene:Rv3718c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3718c;logic_name=ena Chromosome ena mRNA 4161815 4162258 . - . ID=transcript:Rv3718c;Parent=gene:Rv3718c;biotype=protein_coding;transcript_id=Rv3718c Chromosome ena exon 4161815 4162258 . - . Parent=transcript:Rv3718c;Name=Rv3718c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3718c-1;rank=1 Chromosome ena CDS 4161815 4162258 . - 0 ID=CDS:Rv3718c;Parent=transcript:Rv3718c;protein_id=Rv3718c ### -Chromosome ena gene 4162306 4163718 . + . ID=gene:Rv3719;biotype=protein_coding;description=Conserved protein;gene_id=Rv3719;logic_name=ena +Chromosome ena gene 4162306 4163718 . + . ID=gene:Rv3719;biotype=protein_coding;description=Conserved protein;gene_id=Rv3719;logic_name=ena Chromosome ena mRNA 4162306 4163718 . + . ID=transcript:Rv3719;Parent=gene:Rv3719;biotype=protein_coding;transcript_id=Rv3719 Chromosome ena exon 4162306 4163718 . + . Parent=transcript:Rv3719;Name=Rv3719-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3719-1;rank=1 Chromosome ena CDS 4162306 4163718 . + 0 ID=CDS:Rv3719;Parent=transcript:Rv3719;protein_id=Rv3719 ### -Chromosome ena gene 4163736 4164998 . + . ID=gene:Rv3720;biotype=protein_coding;description=Possible fatty acid synthase;gene_id=Rv3720;logic_name=ena +Chromosome ena gene 4163736 4164998 . + . ID=gene:Rv3720;biotype=protein_coding;description=Possible fatty acid synthase;gene_id=Rv3720;logic_name=ena Chromosome ena mRNA 4163736 4164998 . + . ID=transcript:Rv3720;Parent=gene:Rv3720;biotype=protein_coding;transcript_id=Rv3720 Chromosome ena exon 4163736 4164998 . + . Parent=transcript:Rv3720;Name=Rv3720-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3720-1;rank=1 Chromosome ena CDS 4163736 4164998 . + 0 ID=CDS:Rv3720;Parent=transcript:Rv3720;protein_id=Rv3720 ### -Chromosome ena gene 4164995 4166731 . - . ID=gene:Rv3721c;Name=dnaZX;biotype=protein_coding;description=DNA polymerase III (subunit gamma/tau) DnaZ/X;gene_id=Rv3721c;logic_name=ena +Chromosome ena gene 4164995 4166731 . - . ID=gene:Rv3721c;Name=dnaZX;biotype=protein_coding;description=DNA polymerase III (subunit gamma/tau) DnaZ/X;gene_id=Rv3721c;logic_name=ena Chromosome ena mRNA 4164995 4166731 . - . ID=transcript:Rv3721c;Parent=gene:Rv3721c;Name=dnaZX-1;biotype=protein_coding;transcript_id=Rv3721c Chromosome ena exon 4164995 4166731 . - . Parent=transcript:Rv3721c;Name=Rv3721c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3721c-1;rank=1 Chromosome ena CDS 4164995 4166731 . - 0 ID=CDS:Rv3721c;Parent=transcript:Rv3721c;protein_id=Rv3721c ### -Chromosome ena gene 4166821 4168128 . - . ID=gene:Rv3722c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3722c;logic_name=ena +Chromosome ena gene 4166821 4168128 . - . ID=gene:Rv3722c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3722c;logic_name=ena Chromosome ena mRNA 4166821 4168128 . - . ID=transcript:Rv3722c;Parent=gene:Rv3722c;biotype=protein_coding;transcript_id=Rv3722c Chromosome ena exon 4166821 4168128 . - . Parent=transcript:Rv3722c;Name=Rv3722c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3722c-1;rank=1 Chromosome ena CDS 4166821 4168128 . - 0 ID=CDS:Rv3722c;Parent=transcript:Rv3722c;protein_id=Rv3722c @@ -19543,152 +19543,152 @@ Chromosome ena transcript 4168345 4168430 . + . ID=transcript:EBG00000313326;Par Chromosome ena exon 4168345 4168430 . + . Parent=transcript:EBG00000313326;Name=EBG00000313326;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313326;rank=1 ### Chromosome ena_gene biological_region 4168345 4168430 . + . external_name=AL123456.3:gene:4168345..4168430;logic_name=ena_gene -Chromosome ena gene 4168536 4169300 . + . ID=gene:Rv3723;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3723;logic_name=ena +Chromosome ena gene 4168536 4169300 . + . ID=gene:Rv3723;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3723;logic_name=ena Chromosome ena mRNA 4168536 4169300 . + . ID=transcript:Rv3723;Parent=gene:Rv3723;biotype=protein_coding;transcript_id=Rv3723 Chromosome ena exon 4168536 4169300 . + . Parent=transcript:Rv3723;Name=Rv3723-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3723-1;rank=1 Chromosome ena CDS 4168536 4169300 . + 0 ID=CDS:Rv3723;Parent=transcript:Rv3723;protein_id=Rv3723 ### -Chromosome ena gene 4169467 4169709 . + . ID=gene:Rv3724A;Name=cut5a;biotype=protein_coding;description=Probable cutinase precursor [first part] Cut5a;gene_id=Rv3724A;logic_name=ena +Chromosome ena gene 4169467 4169709 . + . ID=gene:Rv3724A;Name=cut5a;biotype=protein_coding;description=Probable cutinase precursor [first part] Cut5a;gene_id=Rv3724A;logic_name=ena Chromosome ena mRNA 4169467 4169709 . + . ID=transcript:Rv3724A;Parent=gene:Rv3724A;Name=cut5a-1;biotype=protein_coding;transcript_id=Rv3724A Chromosome ena exon 4169467 4169709 . + . Parent=transcript:Rv3724A;Name=Rv3724A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3724A-1;rank=1 Chromosome ena CDS 4169467 4169709 . + 0 ID=CDS:Rv3724A;Parent=transcript:Rv3724A;protein_id=Rv3724A ### -Chromosome ena gene 4169606 4170169 . + . ID=gene:Rv3724B;Name=cut5b;biotype=protein_coding;description=Probable cutinase [second part] Cut5b;gene_id=Rv3724B;logic_name=ena +Chromosome ena gene 4169606 4170169 . + . ID=gene:Rv3724B;Name=cut5b;biotype=protein_coding;description=Probable cutinase [second part] Cut5b;gene_id=Rv3724B;logic_name=ena Chromosome ena mRNA 4169606 4170169 . + . ID=transcript:Rv3724B;Parent=gene:Rv3724B;Name=cut5b-1;biotype=protein_coding;transcript_id=Rv3724B Chromosome ena exon 4169606 4170169 . + . Parent=transcript:Rv3724B;Name=Rv3724B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3724B-1;rank=1 Chromosome ena CDS 4169606 4170169 . + 0 ID=CDS:Rv3724B;Parent=transcript:Rv3724B;protein_id=Rv3724B ### -Chromosome ena gene 4170214 4171143 . + . ID=gene:Rv3725;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3725;logic_name=ena +Chromosome ena gene 4170214 4171143 . + . ID=gene:Rv3725;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3725;logic_name=ena Chromosome ena mRNA 4170214 4171143 . + . ID=transcript:Rv3725;Parent=gene:Rv3725;biotype=protein_coding;transcript_id=Rv3725 Chromosome ena exon 4170214 4171143 . + . Parent=transcript:Rv3725;Name=Rv3725-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3725-1;rank=1 Chromosome ena CDS 4170214 4171143 . + 0 ID=CDS:Rv3725;Parent=transcript:Rv3725;protein_id=Rv3725 ### -Chromosome ena gene 4171421 4172614 . + . ID=gene:Rv3726;biotype=protein_coding;description=Possible dehydrogenase;gene_id=Rv3726;logic_name=ena +Chromosome ena gene 4171421 4172614 . + . ID=gene:Rv3726;biotype=protein_coding;description=Possible dehydrogenase;gene_id=Rv3726;logic_name=ena Chromosome ena mRNA 4171421 4172614 . + . ID=transcript:Rv3726;Parent=gene:Rv3726;biotype=protein_coding;transcript_id=Rv3726 Chromosome ena exon 4171421 4172614 . + . Parent=transcript:Rv3726;Name=Rv3726-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3726-1;rank=1 Chromosome ena CDS 4171421 4172614 . + 0 ID=CDS:Rv3726;Parent=transcript:Rv3726;protein_id=Rv3726 ### -Chromosome ena gene 4172955 4174763 . + . ID=gene:Rv3727;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3727;logic_name=ena +Chromosome ena gene 4172955 4174763 . + . ID=gene:Rv3727;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3727;logic_name=ena Chromosome ena mRNA 4172955 4174763 . + . ID=transcript:Rv3727;Parent=gene:Rv3727;biotype=protein_coding;transcript_id=Rv3727 Chromosome ena exon 4172955 4174763 . + . Parent=transcript:Rv3727;Name=Rv3727-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3727-1;rank=1 Chromosome ena CDS 4172955 4174763 . + 0 ID=CDS:Rv3727;Parent=transcript:Rv3727;protein_id=Rv3727 ### -Chromosome ena gene 4174873 4178070 . + . ID=gene:Rv3728;biotype=protein_coding;description=Probable conserved two-domain membrane protein;gene_id=Rv3728;logic_name=ena +Chromosome ena gene 4174873 4178070 . + . ID=gene:Rv3728;biotype=protein_coding;description=Probable conserved two-domain membrane protein;gene_id=Rv3728;logic_name=ena Chromosome ena mRNA 4174873 4178070 . + . ID=transcript:Rv3728;Parent=gene:Rv3728;biotype=protein_coding;transcript_id=Rv3728 Chromosome ena exon 4174873 4178070 . + . Parent=transcript:Rv3728;Name=Rv3728-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3728-1;rank=1 Chromosome ena CDS 4174873 4178070 . + 0 ID=CDS:Rv3728;Parent=transcript:Rv3728;protein_id=Rv3728 ### -Chromosome ena gene 4178285 4180615 . + . ID=gene:Rv3729;biotype=protein_coding;description=Possible transferase;gene_id=Rv3729;logic_name=ena +Chromosome ena gene 4178285 4180615 . + . ID=gene:Rv3729;biotype=protein_coding;description=Possible transferase;gene_id=Rv3729;logic_name=ena Chromosome ena mRNA 4178285 4180615 . + . ID=transcript:Rv3729;Parent=gene:Rv3729;biotype=protein_coding;transcript_id=Rv3729 Chromosome ena exon 4178285 4180615 . + . Parent=transcript:Rv3729;Name=Rv3729-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3729-1;rank=1 Chromosome ena CDS 4178285 4180615 . + 0 ID=CDS:Rv3729;Parent=transcript:Rv3729;protein_id=Rv3729 ### -Chromosome ena gene 4180680 4181720 . - . ID=gene:Rv3730c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3730c;logic_name=ena +Chromosome ena gene 4180680 4181720 . - . ID=gene:Rv3730c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3730c;logic_name=ena Chromosome ena mRNA 4180680 4181720 . - . ID=transcript:Rv3730c;Parent=gene:Rv3730c;biotype=protein_coding;transcript_id=Rv3730c Chromosome ena exon 4180680 4181720 . - . Parent=transcript:Rv3730c;Name=Rv3730c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3730c-1;rank=1 Chromosome ena CDS 4180680 4181720 . - 0 ID=CDS:Rv3730c;Parent=transcript:Rv3730c;protein_id=Rv3730c ### -Chromosome ena gene 4181758 4182834 . + . ID=gene:Rv3731;Name=ligC;biotype=protein_coding;description=Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase);gene_id=Rv3731;logic_name=ena +Chromosome ena gene 4181758 4182834 . + . ID=gene:Rv3731;Name=ligC;biotype=protein_coding;description=Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase);gene_id=Rv3731;logic_name=ena Chromosome ena mRNA 4181758 4182834 . + . ID=transcript:Rv3731;Parent=gene:Rv3731;Name=ligC-1;biotype=protein_coding;transcript_id=Rv3731 Chromosome ena exon 4181758 4182834 . + . Parent=transcript:Rv3731;Name=Rv3731-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3731-1;rank=1 Chromosome ena CDS 4181758 4182834 . + 0 ID=CDS:Rv3731;Parent=transcript:Rv3731;protein_id=Rv3731 ### -Chromosome ena gene 4182934 4183992 . + . ID=gene:Rv3732;biotype=protein_coding;description=Conserved protein;gene_id=Rv3732;logic_name=ena +Chromosome ena gene 4182934 4183992 . + . ID=gene:Rv3732;biotype=protein_coding;description=Conserved protein;gene_id=Rv3732;logic_name=ena Chromosome ena mRNA 4182934 4183992 . + . ID=transcript:Rv3732;Parent=gene:Rv3732;biotype=protein_coding;transcript_id=Rv3732 Chromosome ena exon 4182934 4183992 . + . Parent=transcript:Rv3732;Name=Rv3732-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3732-1;rank=1 Chromosome ena CDS 4182934 4183992 . + 0 ID=CDS:Rv3732;Parent=transcript:Rv3732;protein_id=Rv3732 ### -Chromosome ena gene 4184012 4184512 . - . ID=gene:Rv3733c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3733c;logic_name=ena +Chromosome ena gene 4184012 4184512 . - . ID=gene:Rv3733c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3733c;logic_name=ena Chromosome ena mRNA 4184012 4184512 . - . ID=transcript:Rv3733c;Parent=gene:Rv3733c;biotype=protein_coding;transcript_id=Rv3733c Chromosome ena exon 4184012 4184512 . - . Parent=transcript:Rv3733c;Name=Rv3733c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3733c-1;rank=1 Chromosome ena CDS 4184012 4184512 . - 0 ID=CDS:Rv3733c;Parent=transcript:Rv3733c;protein_id=Rv3733c ### -Chromosome ena gene 4184526 4185890 . - . ID=gene:Rv3734c;Name=tgs2;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs2;gene_id=Rv3734c;logic_name=ena +Chromosome ena gene 4184526 4185890 . - . ID=gene:Rv3734c;Name=tgs2;biotype=protein_coding;description=Putative triacylglycerol synthase (diacylglycerol acyltransferase) Tgs2;gene_id=Rv3734c;logic_name=ena Chromosome ena mRNA 4184526 4185890 . - . ID=transcript:Rv3734c;Parent=gene:Rv3734c;Name=tgs2-1;biotype=protein_coding;transcript_id=Rv3734c Chromosome ena exon 4184526 4185890 . - . Parent=transcript:Rv3734c;Name=Rv3734c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3734c-1;rank=1 Chromosome ena CDS 4184526 4185890 . - 0 ID=CDS:Rv3734c;Parent=transcript:Rv3734c;protein_id=Rv3734c ### -Chromosome ena gene 4186089 4186577 . + . ID=gene:Rv3735;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3735;logic_name=ena +Chromosome ena gene 4186089 4186577 . + . ID=gene:Rv3735;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3735;logic_name=ena Chromosome ena mRNA 4186089 4186577 . + . ID=transcript:Rv3735;Parent=gene:Rv3735;biotype=protein_coding;transcript_id=Rv3735 Chromosome ena exon 4186089 4186577 . + . Parent=transcript:Rv3735;Name=Rv3735-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3735-1;rank=1 Chromosome ena CDS 4186089 4186577 . + 0 ID=CDS:Rv3735;Parent=transcript:Rv3735;protein_id=Rv3735 ### -Chromosome ena gene 4186634 4187695 . + . ID=gene:Rv3736;biotype=protein_coding;description=Transcriptional regulatory protein (probably AraC/XylS-family);gene_id=Rv3736;logic_name=ena +Chromosome ena gene 4186634 4187695 . + . ID=gene:Rv3736;biotype=protein_coding;description=Transcriptional regulatory protein (probably AraC/XylS-family);gene_id=Rv3736;logic_name=ena Chromosome ena mRNA 4186634 4187695 . + . ID=transcript:Rv3736;Parent=gene:Rv3736;biotype=protein_coding;transcript_id=Rv3736 Chromosome ena exon 4186634 4187695 . + . Parent=transcript:Rv3736;Name=Rv3736-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3736-1;rank=1 Chromosome ena CDS 4186634 4187695 . + 0 ID=CDS:Rv3736;Parent=transcript:Rv3736;protein_id=Rv3736 ### -Chromosome ena gene 4187699 4189288 . + . ID=gene:Rv3737;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3737;logic_name=ena +Chromosome ena gene 4187699 4189288 . + . ID=gene:Rv3737;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3737;logic_name=ena Chromosome ena mRNA 4187699 4189288 . + . ID=transcript:Rv3737;Parent=gene:Rv3737;biotype=protein_coding;transcript_id=Rv3737 Chromosome ena exon 4187699 4189288 . + . Parent=transcript:Rv3737;Name=Rv3737-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3737-1;rank=1 Chromosome ena CDS 4187699 4189288 . + 0 ID=CDS:Rv3737;Parent=transcript:Rv3737;protein_id=Rv3737 ### -Chromosome ena gene 4189285 4190232 . - . ID=gene:Rv3738c;Name=PPE66;biotype=protein_coding;description=PPE family protein PPE66;gene_id=Rv3738c;logic_name=ena +Chromosome ena gene 4189285 4190232 . - . ID=gene:Rv3738c;Name=PPE66;biotype=protein_coding;description=PPE family protein PPE66;gene_id=Rv3738c;logic_name=ena Chromosome ena mRNA 4189285 4190232 . - . ID=transcript:Rv3738c;Parent=gene:Rv3738c;Name=PPE66-1;biotype=protein_coding;transcript_id=Rv3738c Chromosome ena exon 4189285 4190232 . - . Parent=transcript:Rv3738c;Name=Rv3738c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3738c-1;rank=1 Chromosome ena CDS 4189285 4190232 . - 0 ID=CDS:Rv3738c;Parent=transcript:Rv3738c;protein_id=Rv3738c ### -Chromosome ena gene 4190284 4190517 . - . ID=gene:Rv3739c;Name=PPE67;biotype=protein_coding;description=PPE family protein PPE67;gene_id=Rv3739c;logic_name=ena +Chromosome ena gene 4190284 4190517 . - . ID=gene:Rv3739c;Name=PPE67;biotype=protein_coding;description=PPE family protein PPE67;gene_id=Rv3739c;logic_name=ena Chromosome ena mRNA 4190284 4190517 . - . ID=transcript:Rv3739c;Parent=gene:Rv3739c;Name=PPE67-1;biotype=protein_coding;transcript_id=Rv3739c Chromosome ena exon 4190284 4190517 . - . Parent=transcript:Rv3739c;Name=Rv3739c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3739c-1;rank=1 Chromosome ena CDS 4190284 4190517 . - 0 ID=CDS:Rv3739c;Parent=transcript:Rv3739c;protein_id=Rv3739c ### -Chromosome ena gene 4190833 4192179 . - . ID=gene:Rv3740c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3740c;logic_name=ena +Chromosome ena gene 4190833 4192179 . - . ID=gene:Rv3740c;biotype=protein_coding;description=Possible triacylglycerol synthase (diacylglycerol acyltransferase);gene_id=Rv3740c;logic_name=ena Chromosome ena mRNA 4190833 4192179 . - . ID=transcript:Rv3740c;Parent=gene:Rv3740c;biotype=protein_coding;transcript_id=Rv3740c Chromosome ena exon 4190833 4192179 . - . Parent=transcript:Rv3740c;Name=Rv3740c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3740c-1;rank=1 Chromosome ena CDS 4190833 4192179 . - 0 ID=CDS:Rv3740c;Parent=transcript:Rv3740c;protein_id=Rv3740c ### -Chromosome ena gene 4192179 4192853 . - . ID=gene:Rv3741c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3741c;logic_name=ena +Chromosome ena gene 4192179 4192853 . - . ID=gene:Rv3741c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3741c;logic_name=ena Chromosome ena mRNA 4192179 4192853 . - . ID=transcript:Rv3741c;Parent=gene:Rv3741c;biotype=protein_coding;transcript_id=Rv3741c Chromosome ena exon 4192179 4192853 . - . Parent=transcript:Rv3741c;Name=Rv3741c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3741c-1;rank=1 Chromosome ena CDS 4192179 4192853 . - 0 ID=CDS:Rv3741c;Parent=transcript:Rv3741c;protein_id=Rv3741c ### -Chromosome ena gene 4192850 4193245 . - . ID=gene:Rv3742c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3742c;logic_name=ena +Chromosome ena gene 4192850 4193245 . - . ID=gene:Rv3742c;biotype=protein_coding;description=Possible oxidoreductase;gene_id=Rv3742c;logic_name=ena Chromosome ena mRNA 4192850 4193245 . - . ID=transcript:Rv3742c;Parent=gene:Rv3742c;biotype=protein_coding;transcript_id=Rv3742c Chromosome ena exon 4192850 4193245 . - . Parent=transcript:Rv3742c;Name=Rv3742c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3742c-1;rank=1 Chromosome ena CDS 4192850 4193245 . - 0 ID=CDS:Rv3742c;Parent=transcript:Rv3742c;protein_id=Rv3742c ### -Chromosome ena gene 4193391 4195373 . - . ID=gene:Rv3743c;Name=ctpJ;biotype=protein_coding;description=Probable cation transporter P-type ATPase CtpJ;gene_id=Rv3743c;logic_name=ena +Chromosome ena gene 4193391 4195373 . - . ID=gene:Rv3743c;Name=ctpJ;biotype=protein_coding;description=Probable cation transporter P-type ATPase CtpJ;gene_id=Rv3743c;logic_name=ena Chromosome ena mRNA 4193391 4195373 . - . ID=transcript:Rv3743c;Parent=gene:Rv3743c;Name=ctpJ-1;biotype=protein_coding;transcript_id=Rv3743c Chromosome ena exon 4193391 4195373 . - . Parent=transcript:Rv3743c;Name=Rv3743c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3743c-1;rank=1 Chromosome ena CDS 4193391 4195373 . - 0 ID=CDS:Rv3743c;Parent=transcript:Rv3743c;protein_id=Rv3743c ### -Chromosome ena gene 4195440 4195802 . + . ID=gene:Rv3744;Name=nmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator (ArsR-SmtB family);gene_id=Rv3744;logic_name=ena +Chromosome ena gene 4195440 4195802 . + . ID=gene:Rv3744;Name=nmtR;biotype=protein_coding;description=Metal sensor transcriptional regulator (ArsR-SmtB family);gene_id=Rv3744;logic_name=ena Chromosome ena mRNA 4195440 4195802 . + . ID=transcript:Rv3744;Parent=gene:Rv3744;Name=nmtR-1;biotype=protein_coding;transcript_id=Rv3744 Chromosome ena exon 4195440 4195802 . + . Parent=transcript:Rv3744;Name=Rv3744-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3744-1;rank=1 Chromosome ena CDS 4195440 4195802 . + 0 ID=CDS:Rv3744;Parent=transcript:Rv3744;protein_id=Rv3744 ### -Chromosome ena gene 4195886 4196098 . - . ID=gene:Rv3745c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3745c;logic_name=ena +Chromosome ena gene 4195886 4196098 . - . ID=gene:Rv3745c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3745c;logic_name=ena Chromosome ena mRNA 4195886 4196098 . - . ID=transcript:Rv3745c;Parent=gene:Rv3745c;biotype=protein_coding;transcript_id=Rv3745c Chromosome ena exon 4195886 4196098 . - . Parent=transcript:Rv3745c;Name=Rv3745c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3745c-1;rank=1 Chromosome ena CDS 4195886 4196098 . - 0 ID=CDS:Rv3745c;Parent=transcript:Rv3745c;protein_id=Rv3745c ### -Chromosome ena gene 4196171 4196506 . - . ID=gene:Rv3746c;Name=PE34;biotype=protein_coding;description=Probable PE family protein PE34 (PE family-related protein);gene_id=Rv3746c;logic_name=ena +Chromosome ena gene 4196171 4196506 . - . ID=gene:Rv3746c;Name=PE34;biotype=protein_coding;description=Probable PE family protein PE34 (PE family-related protein);gene_id=Rv3746c;logic_name=ena Chromosome ena mRNA 4196171 4196506 . - . ID=transcript:Rv3746c;Parent=gene:Rv3746c;Name=PE34-1;biotype=protein_coding;transcript_id=Rv3746c Chromosome ena exon 4196171 4196506 . - . Parent=transcript:Rv3746c;Name=Rv3746c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3746c-1;rank=1 Chromosome ena CDS 4196171 4196506 . - 0 ID=CDS:Rv3746c;Parent=transcript:Rv3746c;protein_id=Rv3746c ### -Chromosome ena gene 4196724 4197107 . + . ID=gene:Rv3747;biotype=protein_coding;description=Conserved protein;gene_id=Rv3747;logic_name=ena +Chromosome ena gene 4196724 4197107 . + . ID=gene:Rv3747;biotype=protein_coding;description=Conserved protein;gene_id=Rv3747;logic_name=ena Chromosome ena mRNA 4196724 4197107 . + . ID=transcript:Rv3747;Parent=gene:Rv3747;biotype=protein_coding;transcript_id=Rv3747 Chromosome ena exon 4196724 4197107 . + . Parent=transcript:Rv3747;Name=Rv3747-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3747-1;rank=1 Chromosome ena CDS 4196724 4197107 . + 0 ID=CDS:Rv3747;Parent=transcript:Rv3747;protein_id=Rv3747 ### -Chromosome ena gene 4197236 4197595 . + . ID=gene:Rv3748;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3748;logic_name=ena +Chromosome ena gene 4197236 4197595 . + . ID=gene:Rv3748;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3748;logic_name=ena Chromosome ena mRNA 4197236 4197595 . + . ID=transcript:Rv3748;Parent=gene:Rv3748;biotype=protein_coding;transcript_id=Rv3748 Chromosome ena exon 4197236 4197595 . + . Parent=transcript:Rv3748;Name=Rv3748-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3748-1;rank=1 Chromosome ena CDS 4197236 4197595 . + 0 ID=CDS:Rv3748;Parent=transcript:Rv3748;protein_id=Rv3748 ### -Chromosome ena gene 4197628 4198137 . - . ID=gene:Rv3749c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3749c;logic_name=ena +Chromosome ena gene 4197628 4198137 . - . ID=gene:Rv3749c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3749c;logic_name=ena Chromosome ena mRNA 4197628 4198137 . - . ID=transcript:Rv3749c;Parent=gene:Rv3749c;biotype=protein_coding;transcript_id=Rv3749c Chromosome ena exon 4197628 4198137 . - . Parent=transcript:Rv3749c;Name=Rv3749c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3749c-1;rank=1 Chromosome ena CDS 4197628 4198137 . - 0 ID=CDS:Rv3749c;Parent=transcript:Rv3749c;protein_id=Rv3749c ### -Chromosome ena gene 4198205 4198597 . - . ID=gene:Rv3750c;biotype=protein_coding;description=Possible excisionase;gene_id=Rv3750c;logic_name=ena +Chromosome ena gene 4198205 4198597 . - . ID=gene:Rv3750c;biotype=protein_coding;description=Possible excisionase;gene_id=Rv3750c;logic_name=ena Chromosome ena mRNA 4198205 4198597 . - . ID=transcript:Rv3750c;Parent=gene:Rv3750c;biotype=protein_coding;transcript_id=Rv3750c Chromosome ena exon 4198205 4198597 . - . Parent=transcript:Rv3750c;Name=Rv3750c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3750c-1;rank=1 Chromosome ena CDS 4198205 4198597 . - 0 ID=CDS:Rv3750c;Parent=transcript:Rv3750c;protein_id=Rv3750c ### -Chromosome ena gene 4198874 4199089 . + . ID=gene:Rv3751;biotype=protein_coding;description=Probable integrase (fragment);gene_id=Rv3751;logic_name=ena +Chromosome ena gene 4198874 4199089 . + . ID=gene:Rv3751;biotype=protein_coding;description=Probable integrase (fragment);gene_id=Rv3751;logic_name=ena Chromosome ena mRNA 4198874 4199089 . + . ID=transcript:Rv3751;Parent=gene:Rv3751;biotype=protein_coding;transcript_id=Rv3751 Chromosome ena exon 4198874 4199089 . + . Parent=transcript:Rv3751;Name=Rv3751-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3751-1;rank=1 Chromosome ena CDS 4198874 4199089 . + 0 ID=CDS:Rv3751;Parent=transcript:Rv3751;protein_id=Rv3751 @@ -19698,112 +19698,112 @@ Chromosome ena transcript 4199131 4199217 . - . ID=transcript:EBG00000313366;Par Chromosome ena exon 4199131 4199217 . - . Parent=transcript:EBG00000313366;Name=EBG00000313366;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313366;rank=1 ### Chromosome ena_gene biological_region 4199131 4199217 . - . external_name=AL123456.3:gene:complement(4199131..4199217);logic_name=ena_gene -Chromosome ena gene 4199247 4199705 . - . ID=gene:Rv3752c;biotype=protein_coding;description=Possible cytidine/deoxycytidylate deaminase;gene_id=Rv3752c;logic_name=ena +Chromosome ena gene 4199247 4199705 . - . ID=gene:Rv3752c;biotype=protein_coding;description=Possible cytidine/deoxycytidylate deaminase;gene_id=Rv3752c;logic_name=ena Chromosome ena mRNA 4199247 4199705 . - . ID=transcript:Rv3752c;Parent=gene:Rv3752c;biotype=protein_coding;transcript_id=Rv3752c Chromosome ena exon 4199247 4199705 . - . Parent=transcript:Rv3752c;Name=Rv3752c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3752c-1;rank=1 Chromosome ena CDS 4199247 4199705 . - 0 ID=CDS:Rv3752c;Parent=transcript:Rv3752c;protein_id=Rv3752c ### -Chromosome ena gene 4199721 4200221 . - . ID=gene:Rv3753c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3753c;logic_name=ena +Chromosome ena gene 4199721 4200221 . - . ID=gene:Rv3753c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3753c;logic_name=ena Chromosome ena mRNA 4199721 4200221 . - . ID=transcript:Rv3753c;Parent=gene:Rv3753c;biotype=protein_coding;transcript_id=Rv3753c Chromosome ena exon 4199721 4200221 . - . Parent=transcript:Rv3753c;Name=Rv3753c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3753c-1;rank=1 Chromosome ena CDS 4199721 4200221 . - 0 ID=CDS:Rv3753c;Parent=transcript:Rv3753c;protein_id=Rv3753c ### -Chromosome ena gene 4200421 4201326 . + . ID=gene:Rv3754;Name=tyrA;biotype=protein_coding;description=Prephenate dehydrogenase TyrA (PDH) (hydroxyphenylpyruvate synthase);gene_id=Rv3754;logic_name=ena +Chromosome ena gene 4200421 4201326 . + . ID=gene:Rv3754;Name=tyrA;biotype=protein_coding;description=Prephenate dehydrogenase TyrA (PDH) (hydroxyphenylpyruvate synthase);gene_id=Rv3754;logic_name=ena Chromosome ena mRNA 4200421 4201326 . + . ID=transcript:Rv3754;Parent=gene:Rv3754;Name=tyrA-1;biotype=protein_coding;transcript_id=Rv3754 Chromosome ena exon 4200421 4201326 . + . Parent=transcript:Rv3754;Name=Rv3754-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3754-1;rank=1 Chromosome ena CDS 4200421 4201326 . + 0 ID=CDS:Rv3754;Parent=transcript:Rv3754;protein_id=Rv3754 ### -Chromosome ena gene 4201289 4201888 . - . ID=gene:Rv3755c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3755c;logic_name=ena +Chromosome ena gene 4201289 4201888 . - . ID=gene:Rv3755c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3755c;logic_name=ena Chromosome ena mRNA 4201289 4201888 . - . ID=transcript:Rv3755c;Parent=gene:Rv3755c;biotype=protein_coding;transcript_id=Rv3755c Chromosome ena exon 4201289 4201888 . - . Parent=transcript:Rv3755c;Name=Rv3755c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3755c-1;rank=1 Chromosome ena CDS 4201289 4201888 . - 0 ID=CDS:Rv3755c;Parent=transcript:Rv3755c;protein_id=Rv3755c ### -Chromosome ena gene 4201894 4202613 . - . ID=gene:Rv3756c;Name=proZ;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ;gene_id=Rv3756c;logic_name=ena +Chromosome ena gene 4201894 4202613 . - . ID=gene:Rv3756c;Name=proZ;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ;gene_id=Rv3756c;logic_name=ena Chromosome ena mRNA 4201894 4202613 . - . ID=transcript:Rv3756c;Parent=gene:Rv3756c;Name=proZ-1;biotype=protein_coding;transcript_id=Rv3756c Chromosome ena exon 4201894 4202613 . - . Parent=transcript:Rv3756c;Name=Rv3756c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3756c-1;rank=1 Chromosome ena CDS 4201894 4202613 . - 0 ID=CDS:Rv3756c;Parent=transcript:Rv3756c;protein_id=Rv3756c ### -Chromosome ena gene 4202610 4203299 . - . ID=gene:Rv3757c;Name=proW;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW;gene_id=Rv3757c;logic_name=ena +Chromosome ena gene 4202610 4203299 . - . ID=gene:Rv3757c;Name=proW;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW;gene_id=Rv3757c;logic_name=ena Chromosome ena mRNA 4202610 4203299 . - . ID=transcript:Rv3757c;Parent=gene:Rv3757c;Name=proW-1;biotype=protein_coding;transcript_id=Rv3757c Chromosome ena exon 4202610 4203299 . - . Parent=transcript:Rv3757c;Name=Rv3757c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3757c-1;rank=1 Chromosome ena CDS 4202610 4203299 . - 0 ID=CDS:Rv3757c;Parent=transcript:Rv3757c;protein_id=Rv3757c ### -Chromosome ena gene 4203287 4204417 . - . ID=gene:Rv3758c;Name=proV;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV;gene_id=Rv3758c;logic_name=ena +Chromosome ena gene 4203287 4204417 . - . ID=gene:Rv3758c;Name=proV;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV;gene_id=Rv3758c;logic_name=ena Chromosome ena mRNA 4203287 4204417 . - . ID=transcript:Rv3758c;Parent=gene:Rv3758c;Name=proV-1;biotype=protein_coding;transcript_id=Rv3758c Chromosome ena exon 4203287 4204417 . - . Parent=transcript:Rv3758c;Name=Rv3758c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3758c-1;rank=1 Chromosome ena CDS 4203287 4204417 . - 0 ID=CDS:Rv3758c;Parent=transcript:Rv3758c;protein_id=Rv3758c ### -Chromosome ena gene 4204426 4205373 . - . ID=gene:Rv3759c;Name=proX;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) binding lipoprotein ProX;gene_id=Rv3759c;logic_name=ena +Chromosome ena gene 4204426 4205373 . - . ID=gene:Rv3759c;Name=proX;biotype=protein_coding;description=Possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) binding lipoprotein ProX;gene_id=Rv3759c;logic_name=ena Chromosome ena mRNA 4204426 4205373 . - . ID=transcript:Rv3759c;Parent=gene:Rv3759c;Name=proX-1;biotype=protein_coding;transcript_id=Rv3759c Chromosome ena exon 4204426 4205373 . - . Parent=transcript:Rv3759c;Name=Rv3759c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3759c-1;rank=1 Chromosome ena CDS 4204426 4205373 . - 0 ID=CDS:Rv3759c;Parent=transcript:Rv3759c;protein_id=Rv3759c ### -Chromosome ena gene 4205538 4205840 . + . ID=gene:Rv3760;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3760;logic_name=ena +Chromosome ena gene 4205538 4205840 . + . ID=gene:Rv3760;biotype=protein_coding;description=Possible conserved membrane protein;gene_id=Rv3760;logic_name=ena Chromosome ena mRNA 4205538 4205840 . + . ID=transcript:Rv3760;Parent=gene:Rv3760;biotype=protein_coding;transcript_id=Rv3760 Chromosome ena exon 4205538 4205840 . + . Parent=transcript:Rv3760;Name=Rv3760-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3760-1;rank=1 Chromosome ena CDS 4205538 4205840 . + 0 ID=CDS:Rv3760;Parent=transcript:Rv3760;protein_id=Rv3760 ### -Chromosome ena gene 4205862 4206917 . - . ID=gene:Rv3761c;Name=fadE36;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE36;gene_id=Rv3761c;logic_name=ena +Chromosome ena gene 4205862 4206917 . - . ID=gene:Rv3761c;Name=fadE36;biotype=protein_coding;description=Possible acyl-CoA dehydrogenase FadE36;gene_id=Rv3761c;logic_name=ena Chromosome ena mRNA 4205862 4206917 . - . ID=transcript:Rv3761c;Parent=gene:Rv3761c;Name=fadE36-1;biotype=protein_coding;transcript_id=Rv3761c Chromosome ena exon 4205862 4206917 . - . Parent=transcript:Rv3761c;Name=Rv3761c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3761c-1;rank=1 Chromosome ena CDS 4205862 4206917 . - 0 ID=CDS:Rv3761c;Parent=transcript:Rv3761c;protein_id=Rv3761c ### -Chromosome ena gene 4206996 4208876 . - . ID=gene:Rv3762c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3762c;logic_name=ena +Chromosome ena gene 4206996 4208876 . - . ID=gene:Rv3762c;biotype=protein_coding;description=Possible hydrolase;gene_id=Rv3762c;logic_name=ena Chromosome ena mRNA 4206996 4208876 . - . ID=transcript:Rv3762c;Parent=gene:Rv3762c;biotype=protein_coding;transcript_id=Rv3762c Chromosome ena exon 4206996 4208876 . - . Parent=transcript:Rv3762c;Name=Rv3762c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3762c-1;rank=1 Chromosome ena CDS 4206996 4208876 . - 0 ID=CDS:Rv3762c;Parent=transcript:Rv3762c;protein_id=Rv3762c ### -Chromosome ena gene 4209047 4209526 . + . ID=gene:Rv3763;Name=lpqH;biotype=protein_coding;description=19 kDa lipoprotein antigen precursor LpqH;gene_id=Rv3763;logic_name=ena +Chromosome ena gene 4209047 4209526 . + . ID=gene:Rv3763;Name=lpqH;biotype=protein_coding;description=19 kDa lipoprotein antigen precursor LpqH;gene_id=Rv3763;logic_name=ena Chromosome ena mRNA 4209047 4209526 . + . ID=transcript:Rv3763;Parent=gene:Rv3763;Name=lpqH-1;biotype=protein_coding;transcript_id=Rv3763 Chromosome ena exon 4209047 4209526 . + . Parent=transcript:Rv3763;Name=Rv3763-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3763-1;rank=1 Chromosome ena CDS 4209047 4209526 . + 0 ID=CDS:Rv3763;Parent=transcript:Rv3763;protein_id=Rv3763 ### -Chromosome ena gene 4209582 4211009 . - . ID=gene:Rv3764c;Name=tcrY;biotype=protein_coding;description=Possible two component sensor kinase TcrY;gene_id=Rv3764c;logic_name=ena +Chromosome ena gene 4209582 4211009 . - . ID=gene:Rv3764c;Name=tcrY;biotype=protein_coding;description=Possible two component sensor kinase TcrY;gene_id=Rv3764c;logic_name=ena Chromosome ena mRNA 4209582 4211009 . - . ID=transcript:Rv3764c;Parent=gene:Rv3764c;Name=tcrY-1;biotype=protein_coding;transcript_id=Rv3764c Chromosome ena exon 4209582 4211009 . - . Parent=transcript:Rv3764c;Name=Rv3764c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3764c-1;rank=1 Chromosome ena CDS 4209582 4211009 . - 0 ID=CDS:Rv3764c;Parent=transcript:Rv3764c;protein_id=Rv3764c ### -Chromosome ena gene 4211080 4211784 . - . ID=gene:Rv3765c;Name=tcrX;biotype=protein_coding;description=Probable two component transcriptional regulatory protein TcrX;gene_id=Rv3765c;logic_name=ena +Chromosome ena gene 4211080 4211784 . - . ID=gene:Rv3765c;Name=tcrX;biotype=protein_coding;description=Probable two component transcriptional regulatory protein TcrX;gene_id=Rv3765c;logic_name=ena Chromosome ena mRNA 4211080 4211784 . - . ID=transcript:Rv3765c;Parent=gene:Rv3765c;Name=tcrX-1;biotype=protein_coding;transcript_id=Rv3765c Chromosome ena exon 4211080 4211784 . - . Parent=transcript:Rv3765c;Name=Rv3765c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3765c-1;rank=1 Chromosome ena CDS 4211080 4211784 . - 0 ID=CDS:Rv3765c;Parent=transcript:Rv3765c;protein_id=Rv3765c ### -Chromosome ena gene 4212293 4212982 . + . ID=gene:Rv3766;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3766;logic_name=ena +Chromosome ena gene 4212293 4212982 . + . ID=gene:Rv3766;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3766;logic_name=ena Chromosome ena mRNA 4212293 4212982 . + . ID=transcript:Rv3766;Parent=gene:Rv3766;biotype=protein_coding;transcript_id=Rv3766 Chromosome ena exon 4212293 4212982 . + . Parent=transcript:Rv3766;Name=Rv3766-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3766-1;rank=1 Chromosome ena CDS 4212293 4212982 . + 0 ID=CDS:Rv3766;Parent=transcript:Rv3766;protein_id=Rv3766 ### -Chromosome ena gene 4212996 4213940 . - . ID=gene:Rv3767c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv3767c;logic_name=ena +Chromosome ena gene 4212996 4213940 . - . ID=gene:Rv3767c;biotype=protein_coding;description=Possible S-adenosylmethionine-dependent methyltransferase;gene_id=Rv3767c;logic_name=ena Chromosome ena mRNA 4212996 4213940 . - . ID=transcript:Rv3767c;Parent=gene:Rv3767c;biotype=protein_coding;transcript_id=Rv3767c Chromosome ena exon 4212996 4213940 . - . Parent=transcript:Rv3767c;Name=Rv3767c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3767c-1;rank=1 Chromosome ena CDS 4212996 4213940 . - 0 ID=CDS:Rv3767c;Parent=transcript:Rv3767c;protein_id=Rv3767c ### -Chromosome ena gene 4214070 4214429 . + . ID=gene:Rv3768;biotype=protein_coding;description=Unknown protein;gene_id=Rv3768;logic_name=ena +Chromosome ena gene 4214070 4214429 . + . ID=gene:Rv3768;biotype=protein_coding;description=Unknown protein;gene_id=Rv3768;logic_name=ena Chromosome ena mRNA 4214070 4214429 . + . ID=transcript:Rv3768;Parent=gene:Rv3768;biotype=protein_coding;transcript_id=Rv3768 Chromosome ena exon 4214070 4214429 . + . Parent=transcript:Rv3768;Name=Rv3768-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3768-1;rank=1 Chromosome ena CDS 4214070 4214429 . + 0 ID=CDS:Rv3768;Parent=transcript:Rv3768;protein_id=Rv3768 ### -Chromosome ena gene 4214615 4214887 . + . ID=gene:Rv3769;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3769;logic_name=ena +Chromosome ena gene 4214615 4214887 . + . ID=gene:Rv3769;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3769;logic_name=ena Chromosome ena mRNA 4214615 4214887 . + . ID=transcript:Rv3769;Parent=gene:Rv3769;biotype=protein_coding;transcript_id=Rv3769 Chromosome ena exon 4214615 4214887 . + . Parent=transcript:Rv3769;Name=Rv3769-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3769-1;rank=1 Chromosome ena CDS 4214615 4214887 . + 0 ID=CDS:Rv3769;Parent=transcript:Rv3769;protein_id=Rv3769 ### -Chromosome ena gene 4215200 4215775 . - . ID=gene:Rv3770c;biotype=protein_coding;description=Hypothetical leucine rich protein;gene_id=Rv3770c;logic_name=ena +Chromosome ena gene 4215200 4215775 . - . ID=gene:Rv3770c;biotype=protein_coding;description=Hypothetical leucine rich protein;gene_id=Rv3770c;logic_name=ena Chromosome ena mRNA 4215200 4215775 . - . ID=transcript:Rv3770c;Parent=gene:Rv3770c;biotype=protein_coding;transcript_id=Rv3770c Chromosome ena exon 4215200 4215775 . - . Parent=transcript:Rv3770c;Name=Rv3770c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3770c-1;rank=1 Chromosome ena CDS 4215200 4215775 . - 0 ID=CDS:Rv3770c;Parent=transcript:Rv3770c;protein_id=Rv3770c ### -Chromosome ena gene 4215881 4216063 . - . ID=gene:Rv3770A;biotype=protein_coding;description=Probable remnant of a transposase;gene_id=Rv3770A;logic_name=ena +Chromosome ena gene 4215881 4216063 . - . ID=gene:Rv3770A;biotype=protein_coding;description=Probable remnant of a transposase;gene_id=Rv3770A;logic_name=ena Chromosome ena mRNA 4215881 4216063 . - . ID=transcript:Rv3770A;Parent=gene:Rv3770A;biotype=protein_coding;transcript_id=Rv3770A Chromosome ena exon 4215881 4216063 . - . Parent=transcript:Rv3770A;Name=Rv3770A-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3770A-1;rank=1 Chromosome ena CDS 4215881 4216063 . - 0 ID=CDS:Rv3770A;Parent=transcript:Rv3770A;protein_id=Rv3770A ### -Chromosome ena gene 4216078 4216269 . - . ID=gene:Rv3770B;biotype=protein_coding;description=Probable remnant of a transposase;gene_id=Rv3770B;logic_name=ena +Chromosome ena gene 4216078 4216269 . - . ID=gene:Rv3770B;biotype=protein_coding;description=Probable remnant of a transposase;gene_id=Rv3770B;logic_name=ena Chromosome ena mRNA 4216078 4216269 . - . ID=transcript:Rv3770B;Parent=gene:Rv3770B;biotype=protein_coding;transcript_id=Rv3770B Chromosome ena exon 4216078 4216269 . - . Parent=transcript:Rv3770B;Name=Rv3770B-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3770B-1;rank=1 Chromosome ena CDS 4216078 4216269 . - 0 ID=CDS:Rv3770B;Parent=transcript:Rv3770B;protein_id=Rv3770B ### -Chromosome ena gene 4216404 4216730 . - . ID=gene:Rv3771c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3771c;logic_name=ena +Chromosome ena gene 4216404 4216730 . - . ID=gene:Rv3771c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3771c;logic_name=ena Chromosome ena mRNA 4216404 4216730 . - . ID=transcript:Rv3771c;Parent=gene:Rv3771c;biotype=protein_coding;transcript_id=Rv3771c Chromosome ena exon 4216404 4216730 . - . Parent=transcript:Rv3771c;Name=Rv3771c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3771c-1;rank=1 Chromosome ena CDS 4216404 4216730 . - 0 ID=CDS:Rv3771c;Parent=transcript:Rv3771c;protein_id=Rv3771c @@ -19818,27 +19818,27 @@ Chromosome ena transcript 4216968 4217056 . - . ID=transcript:EBG00000313320;Par Chromosome ena exon 4216968 4217056 . - . Parent=transcript:EBG00000313320;Name=EBG00000313320;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313320;rank=1 ### Chromosome ena_gene biological_region 4216968 4217056 . - . external_name=AL123456.3:gene:complement(4216968..4217056);logic_name=ena_gene -Chromosome ena gene 4217134 4218195 . + . ID=gene:Rv3772;Name=hisC2;biotype=protein_coding;description=Probable histidinol-phosphate aminotransferase HisC2 (imidazole acetol-phosphate transaminase) (imidazolylacetolphosphate aminotransferase);gene_id=Rv3772;logic_name=ena +Chromosome ena gene 4217134 4218195 . + . ID=gene:Rv3772;Name=hisC2;biotype=protein_coding;description=Probable histidinol-phosphate aminotransferase HisC2 (imidazole acetol-phosphate transaminase) (imidazolylacetolphosphate aminotransferase);gene_id=Rv3772;logic_name=ena Chromosome ena mRNA 4217134 4218195 . + . ID=transcript:Rv3772;Parent=gene:Rv3772;Name=hisC2-1;biotype=protein_coding;transcript_id=Rv3772 Chromosome ena exon 4217134 4218195 . + . Parent=transcript:Rv3772;Name=Rv3772-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3772-1;rank=1 Chromosome ena CDS 4217134 4218195 . + 0 ID=CDS:Rv3772;Parent=transcript:Rv3772;protein_id=Rv3772 ### -Chromosome ena gene 4218241 4218825 . - . ID=gene:Rv3773c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3773c;logic_name=ena +Chromosome ena gene 4218241 4218825 . - . ID=gene:Rv3773c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3773c;logic_name=ena Chromosome ena mRNA 4218241 4218825 . - . ID=transcript:Rv3773c;Parent=gene:Rv3773c;biotype=protein_coding;transcript_id=Rv3773c Chromosome ena exon 4218241 4218825 . - . Parent=transcript:Rv3773c;Name=Rv3773c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3773c-1;rank=1 Chromosome ena CDS 4218241 4218825 . - 0 ID=CDS:Rv3773c;Parent=transcript:Rv3773c;protein_id=Rv3773c ### -Chromosome ena gene 4218849 4219673 . + . ID=gene:Rv3774;Name=echA21;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA21 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3774;logic_name=ena +Chromosome ena gene 4218849 4219673 . + . ID=gene:Rv3774;Name=echA21;biotype=protein_coding;description=Possible enoyl-CoA hydratase EchA21 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase);gene_id=Rv3774;logic_name=ena Chromosome ena mRNA 4218849 4219673 . + . ID=transcript:Rv3774;Parent=gene:Rv3774;Name=echA21-1;biotype=protein_coding;transcript_id=Rv3774 Chromosome ena exon 4218849 4219673 . + . Parent=transcript:Rv3774;Name=Rv3774-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3774-1;rank=1 Chromosome ena CDS 4218849 4219673 . + 0 ID=CDS:Rv3774;Parent=transcript:Rv3774;protein_id=Rv3774 ### -Chromosome ena gene 4219685 4220932 . + . ID=gene:Rv3775;Name=lipE;biotype=protein_coding;description=Probable lipase LipE;gene_id=Rv3775;logic_name=ena +Chromosome ena gene 4219685 4220932 . + . ID=gene:Rv3775;Name=lipE;biotype=protein_coding;description=Probable lipase LipE;gene_id=Rv3775;logic_name=ena Chromosome ena mRNA 4219685 4220932 . + . ID=transcript:Rv3775;Parent=gene:Rv3775;Name=lipE-1;biotype=protein_coding;transcript_id=Rv3775 Chromosome ena exon 4219685 4220932 . + . Parent=transcript:Rv3775;Name=Rv3775-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3775-1;rank=1 Chromosome ena CDS 4219685 4220932 . + 0 ID=CDS:Rv3775;Parent=transcript:Rv3775;protein_id=Rv3775 ### -Chromosome ena gene 4221089 4222648 . + . ID=gene:Rv3776;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3776;logic_name=ena +Chromosome ena gene 4221089 4222648 . + . ID=gene:Rv3776;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3776;logic_name=ena Chromosome ena mRNA 4221089 4222648 . + . ID=transcript:Rv3776;Parent=gene:Rv3776;biotype=protein_coding;transcript_id=Rv3776 Chromosome ena exon 4221089 4222648 . + . Parent=transcript:Rv3776;Name=Rv3776-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3776-1;rank=1 Chromosome ena CDS 4221089 4222648 . + 0 ID=CDS:Rv3776;Parent=transcript:Rv3776;protein_id=Rv3776 @@ -19848,334 +19848,334 @@ Chromosome ena transcript 4222581 4222667 . - . ID=transcript:EBG00000313330;Par Chromosome ena exon 4222581 4222667 . - . Parent=transcript:EBG00000313330;Name=EBG00000313330;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313330;rank=1 ### Chromosome ena_gene biological_region 4222581 4222667 . - . external_name=AL123456.3:gene:complement(4222581..4222667);logic_name=ena_gene -Chromosome ena gene 4222694 4223680 . + . ID=gene:Rv3777;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv3777;logic_name=ena +Chromosome ena gene 4222694 4223680 . + . ID=gene:Rv3777;biotype=protein_coding;description=Probable oxidoreductase;gene_id=Rv3777;logic_name=ena Chromosome ena mRNA 4222694 4223680 . + . ID=transcript:Rv3777;Parent=gene:Rv3777;biotype=protein_coding;transcript_id=Rv3777 Chromosome ena exon 4222694 4223680 . + . Parent=transcript:Rv3777;Name=Rv3777-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3777-1;rank=1 Chromosome ena CDS 4222694 4223680 . + 0 ID=CDS:Rv3777;Parent=transcript:Rv3777;protein_id=Rv3777 ### -Chromosome ena gene 4223699 4224895 . - . ID=gene:Rv3778c;biotype=protein_coding;description=Possible aminotransferase;gene_id=Rv3778c;logic_name=ena +Chromosome ena gene 4223699 4224895 . - . ID=gene:Rv3778c;biotype=protein_coding;description=Possible aminotransferase;gene_id=Rv3778c;logic_name=ena Chromosome ena mRNA 4223699 4224895 . - . ID=transcript:Rv3778c;Parent=gene:Rv3778c;biotype=protein_coding;transcript_id=Rv3778c Chromosome ena exon 4223699 4224895 . - . Parent=transcript:Rv3778c;Name=Rv3778c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3778c-1;rank=1 Chromosome ena CDS 4223699 4224895 . - 0 ID=CDS:Rv3778c;Parent=transcript:Rv3778c;protein_id=Rv3778c ### -Chromosome ena gene 4224985 4226985 . + . ID=gene:Rv3779;biotype=protein_coding;description=Probable conserved transmembrane protein alanine and leucine rich;gene_id=Rv3779;logic_name=ena +Chromosome ena gene 4224985 4226985 . + . ID=gene:Rv3779;biotype=protein_coding;description=Probable conserved transmembrane protein alanine and leucine rich;gene_id=Rv3779;logic_name=ena Chromosome ena mRNA 4224985 4226985 . + . ID=transcript:Rv3779;Parent=gene:Rv3779;biotype=protein_coding;transcript_id=Rv3779 Chromosome ena exon 4224985 4226985 . + . Parent=transcript:Rv3779;Name=Rv3779-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3779-1;rank=1 Chromosome ena CDS 4224985 4226985 . + 0 ID=CDS:Rv3779;Parent=transcript:Rv3779;protein_id=Rv3779 ### -Chromosome ena gene 4226989 4227525 . + . ID=gene:Rv3780;biotype=protein_coding;description=Conserved protein;gene_id=Rv3780;logic_name=ena +Chromosome ena gene 4226989 4227525 . + . ID=gene:Rv3780;biotype=protein_coding;description=Conserved protein;gene_id=Rv3780;logic_name=ena Chromosome ena mRNA 4226989 4227525 . + . ID=transcript:Rv3780;Parent=gene:Rv3780;biotype=protein_coding;transcript_id=Rv3780 Chromosome ena exon 4226989 4227525 . + . Parent=transcript:Rv3780;Name=Rv3780-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3780-1;rank=1 Chromosome ena CDS 4226989 4227525 . + 0 ID=CDS:Rv3780;Parent=transcript:Rv3780;protein_id=Rv3780 ### -Chromosome ena gene 4227529 4228350 . + . ID=gene:Rv3781;Name=rfbE;biotype=protein_coding;description=Probable O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter RfbE;gene_id=Rv3781;logic_name=ena +Chromosome ena gene 4227529 4228350 . + . ID=gene:Rv3781;Name=rfbE;biotype=protein_coding;description=Probable O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter RfbE;gene_id=Rv3781;logic_name=ena Chromosome ena mRNA 4227529 4228350 . + . ID=transcript:Rv3781;Parent=gene:Rv3781;Name=rfbE-1;biotype=protein_coding;transcript_id=Rv3781 Chromosome ena exon 4227529 4228350 . + . Parent=transcript:Rv3781;Name=Rv3781-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3781-1;rank=1 Chromosome ena CDS 4227529 4228350 . + 0 ID=CDS:Rv3781;Parent=transcript:Rv3781;protein_id=Rv3781 ### -Chromosome ena gene 4228347 4229261 . + . ID=gene:Rv3782;Name=glfT1;biotype=protein_coding;description=UDP-galactofuranosyl transferase GlfT1;gene_id=Rv3782;logic_name=ena +Chromosome ena gene 4228347 4229261 . + . ID=gene:Rv3782;Name=glfT1;biotype=protein_coding;description=UDP-galactofuranosyl transferase GlfT1;gene_id=Rv3782;logic_name=ena Chromosome ena mRNA 4228347 4229261 . + . ID=transcript:Rv3782;Parent=gene:Rv3782;Name=glfT1-1;biotype=protein_coding;transcript_id=Rv3782 Chromosome ena exon 4228347 4229261 . + . Parent=transcript:Rv3782;Name=Rv3782-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3782-1;rank=1 Chromosome ena CDS 4228347 4229261 . + 0 ID=CDS:Rv3782;Parent=transcript:Rv3782;protein_id=Rv3782 ### -Chromosome ena gene 4229258 4230100 . + . ID=gene:Rv3783;Name=rfbD;biotype=protein_coding;description=Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD;gene_id=Rv3783;logic_name=ena +Chromosome ena gene 4229258 4230100 . + . ID=gene:Rv3783;Name=rfbD;biotype=protein_coding;description=Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD;gene_id=Rv3783;logic_name=ena Chromosome ena mRNA 4229258 4230100 . + . ID=transcript:Rv3783;Parent=gene:Rv3783;Name=rfbD-1;biotype=protein_coding;transcript_id=Rv3783 Chromosome ena exon 4229258 4230100 . + . Parent=transcript:Rv3783;Name=Rv3783-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3783-1;rank=1 Chromosome ena CDS 4229258 4230100 . + 0 ID=CDS:Rv3783;Parent=transcript:Rv3783;protein_id=Rv3783 ### -Chromosome ena gene 4230256 4231236 . + . ID=gene:Rv3784;biotype=protein_coding;description=Possible dTDP-glucose 4%2C6-dehydratase;gene_id=Rv3784;logic_name=ena +Chromosome ena gene 4230256 4231236 . + . ID=gene:Rv3784;biotype=protein_coding;description=Possible dTDP-glucose 4%2C6-dehydratase;gene_id=Rv3784;logic_name=ena Chromosome ena mRNA 4230256 4231236 . + . ID=transcript:Rv3784;Parent=gene:Rv3784;biotype=protein_coding;transcript_id=Rv3784 Chromosome ena exon 4230256 4231236 . + . Parent=transcript:Rv3784;Name=Rv3784-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3784-1;rank=1 Chromosome ena CDS 4230256 4231236 . + 0 ID=CDS:Rv3784;Parent=transcript:Rv3784;protein_id=Rv3784 ### -Chromosome ena gene 4231320 4232393 . + . ID=gene:Rv3785;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3785;logic_name=ena +Chromosome ena gene 4231320 4232393 . + . ID=gene:Rv3785;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3785;logic_name=ena Chromosome ena mRNA 4231320 4232393 . + . ID=transcript:Rv3785;Parent=gene:Rv3785;biotype=protein_coding;transcript_id=Rv3785 Chromosome ena exon 4231320 4232393 . + . Parent=transcript:Rv3785;Name=Rv3785-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3785-1;rank=1 Chromosome ena CDS 4231320 4232393 . + 0 ID=CDS:Rv3785;Parent=transcript:Rv3785;protein_id=Rv3785 ### -Chromosome ena gene 4232374 4233597 . - . ID=gene:Rv3786c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3786c;logic_name=ena +Chromosome ena gene 4232374 4233597 . - . ID=gene:Rv3786c;biotype=protein_coding;description=Unknown protein;gene_id=Rv3786c;logic_name=ena Chromosome ena mRNA 4232374 4233597 . - . ID=transcript:Rv3786c;Parent=gene:Rv3786c;biotype=protein_coding;transcript_id=Rv3786c Chromosome ena exon 4232374 4233597 . - . Parent=transcript:Rv3786c;Name=Rv3786c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3786c-1;rank=1 Chromosome ena CDS 4232374 4233597 . - 0 ID=CDS:Rv3786c;Parent=transcript:Rv3786c;protein_id=Rv3786c ### -Chromosome ena gene 4233610 4234536 . - . ID=gene:Rv3787c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3787c;logic_name=ena +Chromosome ena gene 4233610 4234536 . - . ID=gene:Rv3787c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3787c;logic_name=ena Chromosome ena mRNA 4233610 4234536 . - . ID=transcript:Rv3787c;Parent=gene:Rv3787c;biotype=protein_coding;transcript_id=Rv3787c Chromosome ena exon 4233610 4234536 . - . Parent=transcript:Rv3787c;Name=Rv3787c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3787c-1;rank=1 Chromosome ena CDS 4233610 4234536 . - 0 ID=CDS:Rv3787c;Parent=transcript:Rv3787c;protein_id=Rv3787c ### -Chromosome ena gene 4234780 4235265 . + . ID=gene:Rv3788;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3788;logic_name=ena +Chromosome ena gene 4234780 4235265 . + . ID=gene:Rv3788;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3788;logic_name=ena Chromosome ena mRNA 4234780 4235265 . + . ID=transcript:Rv3788;Parent=gene:Rv3788;biotype=protein_coding;transcript_id=Rv3788 Chromosome ena exon 4234780 4235265 . + . Parent=transcript:Rv3788;Name=Rv3788-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3788-1;rank=1 Chromosome ena CDS 4234780 4235265 . + 0 ID=CDS:Rv3788;Parent=transcript:Rv3788;protein_id=Rv3788 ### -Chromosome ena gene 4235374 4235739 . + . ID=gene:Rv3789;biotype=protein_coding;description=GTRA family protein;gene_id=Rv3789;logic_name=ena +Chromosome ena gene 4235374 4235739 . + . ID=gene:Rv3789;biotype=protein_coding;description=GTRA family protein;gene_id=Rv3789;logic_name=ena Chromosome ena mRNA 4235374 4235739 . + . ID=transcript:Rv3789;Parent=gene:Rv3789;biotype=protein_coding;transcript_id=Rv3789 Chromosome ena exon 4235374 4235739 . + . Parent=transcript:Rv3789;Name=Rv3789-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3789-1;rank=1 Chromosome ena CDS 4235374 4235739 . + 0 ID=CDS:Rv3789;Parent=transcript:Rv3789;protein_id=Rv3789 ### -Chromosome ena gene 4235779 4237164 . + . ID=gene:Rv3790;Name=dprE1;biotype=protein_coding;description=Decaprenylphosphoryl-beta-D-ribose 2'-oxidase;gene_id=Rv3790;logic_name=ena +Chromosome ena gene 4235779 4237164 . + . ID=gene:Rv3790;Name=dprE1;biotype=protein_coding;description=Decaprenylphosphoryl-beta-D-ribose 2'-oxidase;gene_id=Rv3790;logic_name=ena Chromosome ena mRNA 4235779 4237164 . + . ID=transcript:Rv3790;Parent=gene:Rv3790;Name=dprE1-1;biotype=protein_coding;transcript_id=Rv3790 Chromosome ena exon 4235779 4237164 . + . Parent=transcript:Rv3790;Name=Rv3790-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3790-1;rank=1 Chromosome ena CDS 4235779 4237164 . + 0 ID=CDS:Rv3790;Parent=transcript:Rv3790;protein_id=Rv3790 ### -Chromosome ena gene 4237165 4237929 . + . ID=gene:Rv3791;Name=dprE2;biotype=protein_coding;description=Decaprenylphosphoryl-D-2-keto erythro pentose reductase;gene_id=Rv3791;logic_name=ena +Chromosome ena gene 4237165 4237929 . + . ID=gene:Rv3791;Name=dprE2;biotype=protein_coding;description=Decaprenylphosphoryl-D-2-keto erythro pentose reductase;gene_id=Rv3791;logic_name=ena Chromosome ena mRNA 4237165 4237929 . + . ID=transcript:Rv3791;Parent=gene:Rv3791;Name=dprE2-1;biotype=protein_coding;transcript_id=Rv3791 Chromosome ena exon 4237165 4237929 . + . Parent=transcript:Rv3791;Name=Rv3791-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3791-1;rank=1 Chromosome ena CDS 4237165 4237929 . + 0 ID=CDS:Rv3791;Parent=transcript:Rv3791;protein_id=Rv3791 ### -Chromosome ena gene 4237932 4239863 . + . ID=gene:Rv3792;Name=aftA;biotype=protein_coding;description=Arabinofuranosyltransferase AftA;gene_id=Rv3792;logic_name=ena +Chromosome ena gene 4237932 4239863 . + . ID=gene:Rv3792;Name=aftA;biotype=protein_coding;description=Arabinofuranosyltransferase AftA;gene_id=Rv3792;logic_name=ena Chromosome ena mRNA 4237932 4239863 . + . ID=transcript:Rv3792;Parent=gene:Rv3792;Name=aftA-1;biotype=protein_coding;transcript_id=Rv3792 Chromosome ena exon 4237932 4239863 . + . Parent=transcript:Rv3792;Name=Rv3792-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3792-1;rank=1 Chromosome ena CDS 4237932 4239863 . + 0 ID=CDS:Rv3792;Parent=transcript:Rv3792;protein_id=Rv3792 ### -Chromosome ena gene 4239863 4243147 . + . ID=gene:Rv3793;Name=embC;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbC (arabinosylindolylacetylinositol synthase);gene_id=Rv3793;logic_name=ena +Chromosome ena gene 4239863 4243147 . + . ID=gene:Rv3793;Name=embC;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbC (arabinosylindolylacetylinositol synthase);gene_id=Rv3793;logic_name=ena Chromosome ena mRNA 4239863 4243147 . + . ID=transcript:Rv3793;Parent=gene:Rv3793;Name=embC-1;biotype=protein_coding;transcript_id=Rv3793 Chromosome ena exon 4239863 4243147 . + . Parent=transcript:Rv3793;Name=Rv3793-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3793-1;rank=1 Chromosome ena CDS 4239863 4243147 . + 0 ID=CDS:Rv3793;Parent=transcript:Rv3793;protein_id=Rv3793 ### -Chromosome ena gene 4243233 4246517 . + . ID=gene:Rv3794;Name=embA;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbA (arabinosylindolylacetylinositol synthase);gene_id=Rv3794;logic_name=ena +Chromosome ena gene 4243233 4246517 . + . ID=gene:Rv3794;Name=embA;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbA (arabinosylindolylacetylinositol synthase);gene_id=Rv3794;logic_name=ena Chromosome ena mRNA 4243233 4246517 . + . ID=transcript:Rv3794;Parent=gene:Rv3794;Name=embA-1;biotype=protein_coding;transcript_id=Rv3794 Chromosome ena exon 4243233 4246517 . + . Parent=transcript:Rv3794;Name=Rv3794-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3794-1;rank=1 Chromosome ena CDS 4243233 4246517 . + 0 ID=CDS:Rv3794;Parent=transcript:Rv3794;protein_id=Rv3794 ### -Chromosome ena gene 4246514 4249810 . + . ID=gene:Rv3795;Name=embB;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbB (arabinosylindolylacetylinositol synthase);gene_id=Rv3795;logic_name=ena +Chromosome ena gene 4246514 4249810 . + . ID=gene:Rv3795;Name=embB;biotype=protein_coding;description=Integral membrane indolylacetylinositol arabinosyltransferase EmbB (arabinosylindolylacetylinositol synthase);gene_id=Rv3795;logic_name=ena Chromosome ena mRNA 4246514 4249810 . + . ID=transcript:Rv3795;Parent=gene:Rv3795;Name=embB-1;biotype=protein_coding;transcript_id=Rv3795 Chromosome ena exon 4246514 4249810 . + . Parent=transcript:Rv3795;Name=Rv3795-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3795-1;rank=1 Chromosome ena CDS 4246514 4249810 . + 0 ID=CDS:Rv3795;Parent=transcript:Rv3795;protein_id=Rv3795 ### -Chromosome ena gene 4249878 4251005 . + . ID=gene:Rv3796;biotype=protein_coding;description=Conserved protein;gene_id=Rv3796;logic_name=ena +Chromosome ena gene 4249878 4251005 . + . ID=gene:Rv3796;biotype=protein_coding;description=Conserved protein;gene_id=Rv3796;logic_name=ena Chromosome ena mRNA 4249878 4251005 . + . ID=transcript:Rv3796;Parent=gene:Rv3796;biotype=protein_coding;transcript_id=Rv3796 Chromosome ena exon 4249878 4251005 . + . Parent=transcript:Rv3796;Name=Rv3796-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3796-1;rank=1 Chromosome ena CDS 4249878 4251005 . + 0 ID=CDS:Rv3796;Parent=transcript:Rv3796;protein_id=Rv3796 ### -Chromosome ena gene 4251085 4252866 . + . ID=gene:Rv3797;Name=fadE35;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE35;gene_id=Rv3797;logic_name=ena +Chromosome ena gene 4251085 4252866 . + . ID=gene:Rv3797;Name=fadE35;biotype=protein_coding;description=Probable acyl-CoA dehydrogenase FadE35;gene_id=Rv3797;logic_name=ena Chromosome ena mRNA 4251085 4252866 . + . ID=transcript:Rv3797;Parent=gene:Rv3797;Name=fadE35-1;biotype=protein_coding;transcript_id=Rv3797 Chromosome ena exon 4251085 4252866 . + . Parent=transcript:Rv3797;Name=Rv3797-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3797-1;rank=1 Chromosome ena CDS 4251085 4252866 . + 0 ID=CDS:Rv3797;Parent=transcript:Rv3797;protein_id=Rv3797 ### -Chromosome ena_mobile_element biological_region 4252993 4254324 . + . external_name=Rv3798%3B IS1557-3%2C len: 1332 nt. Insertion sequence IS1557.;logic_name=ena_mobile_element -Chromosome ena gene 4252993 4254327 . + . ID=gene:Rv3798;biotype=protein_coding;description=Probable transposase;gene_id=Rv3798;logic_name=ena +Chromosome ena_mobile_element biological_region 4252993 4254324 . + . external_name=Rv3798%3B IS1557-3%2C len: 1332 nt. Insertion sequence IS1557.;logic_name=ena_mobile_element +Chromosome ena gene 4252993 4254327 . + . ID=gene:Rv3798;biotype=protein_coding;description=Probable transposase;gene_id=Rv3798;logic_name=ena Chromosome ena mRNA 4252993 4254327 . + . ID=transcript:Rv3798;Parent=gene:Rv3798;biotype=protein_coding;transcript_id=Rv3798 Chromosome ena exon 4252993 4254327 . + . Parent=transcript:Rv3798;Name=Rv3798-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3798-1;rank=1 Chromosome ena CDS 4252993 4254327 . + 0 ID=CDS:Rv3798;Parent=transcript:Rv3798;protein_id=Rv3798 ### -Chromosome ena gene 4254380 4255948 . - . ID=gene:Rv3799c;Name=accD4;biotype=protein_coding;description=Probable propionyl-CoA carboxylase beta chain 4 AccD4 (pccase) (propanoyl-CoA:carbon dioxide ligase);gene_id=Rv3799c;logic_name=ena +Chromosome ena gene 4254380 4255948 . - . ID=gene:Rv3799c;Name=accD4;biotype=protein_coding;description=Probable propionyl-CoA carboxylase beta chain 4 AccD4 (pccase) (propanoyl-CoA:carbon dioxide ligase);gene_id=Rv3799c;logic_name=ena Chromosome ena mRNA 4254380 4255948 . - . ID=transcript:Rv3799c;Parent=gene:Rv3799c;Name=accD4-1;biotype=protein_coding;transcript_id=Rv3799c Chromosome ena exon 4254380 4255948 . - . Parent=transcript:Rv3799c;Name=Rv3799c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3799c-1;rank=1 Chromosome ena CDS 4254380 4255948 . - 0 ID=CDS:Rv3799c;Parent=transcript:Rv3799c;protein_id=Rv3799c ### -Chromosome ena gene 4255945 4261146 . - . ID=gene:Rv3800c;Name=pks13;biotype=protein_coding;description=Polyketide synthase Pks13;gene_id=Rv3800c;logic_name=ena +Chromosome ena gene 4255945 4261146 . - . ID=gene:Rv3800c;Name=pks13;biotype=protein_coding;description=Polyketide synthase Pks13;gene_id=Rv3800c;logic_name=ena Chromosome ena mRNA 4255945 4261146 . - . ID=transcript:Rv3800c;Parent=gene:Rv3800c;Name=pks13-1;biotype=protein_coding;transcript_id=Rv3800c Chromosome ena exon 4255945 4261146 . - . Parent=transcript:Rv3800c;Name=Rv3800c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3800c-1;rank=1 Chromosome ena CDS 4255945 4261146 . - 0 ID=CDS:Rv3800c;Parent=transcript:Rv3800c;protein_id=Rv3800c ### -Chromosome ena gene 4261153 4263066 . - . ID=gene:Rv3801c;Name=fadD32;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD32 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase). Also shown to have acyl-ACP ligase activity.;gene_id=Rv3801c;logic_name=ena +Chromosome ena gene 4261153 4263066 . - . ID=gene:Rv3801c;Name=fadD32;biotype=protein_coding;description=Fatty-acid-AMP ligase FadD32 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase). Also shown to have acyl-ACP ligase activity.;gene_id=Rv3801c;logic_name=ena Chromosome ena mRNA 4261153 4263066 . - . ID=transcript:Rv3801c;Parent=gene:Rv3801c;Name=fadD32-1;biotype=protein_coding;transcript_id=Rv3801c Chromosome ena exon 4261153 4263066 . - . Parent=transcript:Rv3801c;Name=Rv3801c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3801c-1;rank=1 Chromosome ena CDS 4261153 4263066 . - 0 ID=CDS:Rv3801c;Parent=transcript:Rv3801c;protein_id=Rv3801c ### -Chromosome ena gene 4263355 4264365 . - . ID=gene:Rv3802c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3802c;logic_name=ena +Chromosome ena gene 4263355 4264365 . - . ID=gene:Rv3802c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3802c;logic_name=ena Chromosome ena mRNA 4263355 4264365 . - . ID=transcript:Rv3802c;Parent=gene:Rv3802c;biotype=protein_coding;transcript_id=Rv3802c Chromosome ena exon 4263355 4264365 . - . Parent=transcript:Rv3802c;Name=Rv3802c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3802c-1;rank=1 Chromosome ena CDS 4263355 4264365 . - 0 ID=CDS:Rv3802c;Parent=transcript:Rv3802c;protein_id=Rv3802c ### -Chromosome ena gene 4264563 4265462 . - . ID=gene:Rv3803c;Name=fbpD;biotype=protein_coding;description=Secreted MPT51/MPB51 antigen protein FbpD (MPT51/MPB51 antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C) (85C);gene_id=Rv3803c;logic_name=ena +Chromosome ena gene 4264563 4265462 . - . ID=gene:Rv3803c;Name=fbpD;biotype=protein_coding;description=Secreted MPT51/MPB51 antigen protein FbpD (MPT51/MPB51 antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C) (85C);gene_id=Rv3803c;logic_name=ena Chromosome ena mRNA 4264563 4265462 . - . ID=transcript:Rv3803c;Parent=gene:Rv3803c;Name=fbpD-1;biotype=protein_coding;transcript_id=Rv3803c Chromosome ena exon 4264563 4265462 . - . Parent=transcript:Rv3803c;Name=Rv3803c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3803c-1;rank=1 Chromosome ena CDS 4264563 4265462 . - 0 ID=CDS:Rv3803c;Parent=transcript:Rv3803c;protein_id=Rv3803c ### -Chromosome ena gene 4265642 4266658 . - . ID=gene:Rv3804c;Name=fbpA;biotype=protein_coding;description=Secreted antigen 85-a FbpA (mycolyl transferase 85A) (fibronectin-binding protein A) (antigen 85 complex A);gene_id=Rv3804c;logic_name=ena +Chromosome ena gene 4265642 4266658 . - . ID=gene:Rv3804c;Name=fbpA;biotype=protein_coding;description=Secreted antigen 85-a FbpA (mycolyl transferase 85A) (fibronectin-binding protein A) (antigen 85 complex A);gene_id=Rv3804c;logic_name=ena Chromosome ena mRNA 4265642 4266658 . - . ID=transcript:Rv3804c;Parent=gene:Rv3804c;Name=fbpA-1;biotype=protein_coding;transcript_id=Rv3804c Chromosome ena exon 4265642 4266658 . - . Parent=transcript:Rv3804c;Name=Rv3804c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3804c-1;rank=1 Chromosome ena CDS 4265642 4266658 . - 0 ID=CDS:Rv3804c;Parent=transcript:Rv3804c;protein_id=Rv3804c ### -Chromosome ena gene 4266953 4268836 . - . ID=gene:Rv3805c;Name=aftB;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftB;gene_id=Rv3805c;logic_name=ena +Chromosome ena gene 4266953 4268836 . - . ID=gene:Rv3805c;Name=aftB;biotype=protein_coding;description=Possible arabinofuranosyltransferase AftB;gene_id=Rv3805c;logic_name=ena Chromosome ena mRNA 4266953 4268836 . - . ID=transcript:Rv3805c;Parent=gene:Rv3805c;Name=aftB-1;biotype=protein_coding;transcript_id=Rv3805c Chromosome ena exon 4266953 4268836 . - . Parent=transcript:Rv3805c;Name=Rv3805c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3805c-1;rank=1 Chromosome ena CDS 4266953 4268836 . - 0 ID=CDS:Rv3805c;Parent=transcript:Rv3805c;protein_id=Rv3805c ### -Chromosome ena gene 4268925 4269833 . - . ID=gene:Rv3806c;Name=ubiA;biotype=protein_coding;description=Decaprenylphosphoryl-5-phosphoribose (DPPR) synthase (decaprenyl-phosphate 5-phosphoribosyltransferase);gene_id=Rv3806c;logic_name=ena +Chromosome ena gene 4268925 4269833 . - . ID=gene:Rv3806c;Name=ubiA;biotype=protein_coding;description=Decaprenylphosphoryl-5-phosphoribose (DPPR) synthase (decaprenyl-phosphate 5-phosphoribosyltransferase);gene_id=Rv3806c;logic_name=ena Chromosome ena mRNA 4268925 4269833 . - . ID=transcript:Rv3806c;Parent=gene:Rv3806c;Name=ubiA-1;biotype=protein_coding;transcript_id=Rv3806c Chromosome ena exon 4268925 4269833 . - . Parent=transcript:Rv3806c;Name=Rv3806c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3806c-1;rank=1 Chromosome ena CDS 4268925 4269833 . - 0 ID=CDS:Rv3806c;Parent=transcript:Rv3806c;protein_id=Rv3806c ### -Chromosome ena gene 4269840 4270337 . - . ID=gene:Rv3807c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3807c;logic_name=ena +Chromosome ena gene 4269840 4270337 . - . ID=gene:Rv3807c;biotype=protein_coding;description=Possible conserved transmembrane protein;gene_id=Rv3807c;logic_name=ena Chromosome ena mRNA 4269840 4270337 . - . ID=transcript:Rv3807c;Parent=gene:Rv3807c;biotype=protein_coding;transcript_id=Rv3807c Chromosome ena exon 4269840 4270337 . - . Parent=transcript:Rv3807c;Name=Rv3807c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3807c-1;rank=1 Chromosome ena CDS 4269840 4270337 . - 0 ID=CDS:Rv3807c;Parent=transcript:Rv3807c;protein_id=Rv3807c ### -Chromosome ena gene 4270366 4272279 . - . ID=gene:Rv3808c;Name=glfT2;biotype=protein_coding;description=Bifunctional UDP-galactofuranosyl transferase GlfT2;gene_id=Rv3808c;logic_name=ena +Chromosome ena gene 4270366 4272279 . - . ID=gene:Rv3808c;Name=glfT2;biotype=protein_coding;description=Bifunctional UDP-galactofuranosyl transferase GlfT2;gene_id=Rv3808c;logic_name=ena Chromosome ena mRNA 4270366 4272279 . - . ID=transcript:Rv3808c;Parent=gene:Rv3808c;Name=glfT2-1;biotype=protein_coding;transcript_id=Rv3808c Chromosome ena exon 4270366 4272279 . - . Parent=transcript:Rv3808c;Name=Rv3808c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3808c-1;rank=1 Chromosome ena CDS 4270366 4272279 . - 0 ID=CDS:Rv3808c;Parent=transcript:Rv3808c;protein_id=Rv3808c ### -Chromosome ena gene 4272276 4273475 . - . ID=gene:Rv3809c;Name=glf;biotype=protein_coding;description=UDP-galactopyranose mutase Glf (UDP-GALP mutase) (NAD+-flavin adenine dinucleotide-requiring enzyme);gene_id=Rv3809c;logic_name=ena +Chromosome ena gene 4272276 4273475 . - . ID=gene:Rv3809c;Name=glf;biotype=protein_coding;description=UDP-galactopyranose mutase Glf (UDP-GALP mutase) (NAD+-flavin adenine dinucleotide-requiring enzyme);gene_id=Rv3809c;logic_name=ena Chromosome ena mRNA 4272276 4273475 . - . ID=transcript:Rv3809c;Parent=gene:Rv3809c;Name=glf-1;biotype=protein_coding;transcript_id=Rv3809c Chromosome ena exon 4272276 4273475 . - . Parent=transcript:Rv3809c;Name=Rv3809c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3809c-1;rank=1 Chromosome ena CDS 4272276 4273475 . - 0 ID=CDS:Rv3809c;Parent=transcript:Rv3809c;protein_id=Rv3809c ### -Chromosome ena gene 4273739 4274593 . + . ID=gene:Rv3810;Name=pirG;biotype=protein_coding;description=Exported repetitive protein precursor PirG (cell surface protein) (EXP53);gene_id=Rv3810;logic_name=ena +Chromosome ena gene 4273739 4274593 . + . ID=gene:Rv3810;Name=pirG;biotype=protein_coding;description=Exported repetitive protein precursor PirG (cell surface protein) (EXP53);gene_id=Rv3810;logic_name=ena Chromosome ena mRNA 4273739 4274593 . + . ID=transcript:Rv3810;Parent=gene:Rv3810;Name=pirG-1;biotype=protein_coding;transcript_id=Rv3810 Chromosome ena exon 4273739 4274593 . + . Parent=transcript:Rv3810;Name=Rv3810-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3810-1;rank=1 Chromosome ena CDS 4273739 4274593 . + 0 ID=CDS:Rv3810;Parent=transcript:Rv3810;protein_id=Rv3810 ### -Chromosome ena gene 4274798 4276417 . + . ID=gene:Rv3811;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3811;logic_name=ena +Chromosome ena gene 4274798 4276417 . + . ID=gene:Rv3811;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3811;logic_name=ena Chromosome ena mRNA 4274798 4276417 . + . ID=transcript:Rv3811;Parent=gene:Rv3811;biotype=protein_coding;transcript_id=Rv3811 Chromosome ena exon 4274798 4276417 . + . Parent=transcript:Rv3811;Name=Rv3811-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3811-1;rank=1 Chromosome ena CDS 4274798 4276417 . + 0 ID=CDS:Rv3811;Parent=transcript:Rv3811;protein_id=Rv3811 ### -Chromosome ena gene 4276571 4278085 . + . ID=gene:Rv3812;Name=PE_PGRS62;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS62;gene_id=Rv3812;logic_name=ena +Chromosome ena gene 4276571 4278085 . + . ID=gene:Rv3812;Name=PE_PGRS62;biotype=protein_coding;description=PE-PGRS family protein PE_PGRS62;gene_id=Rv3812;logic_name=ena Chromosome ena mRNA 4276571 4278085 . + . ID=transcript:Rv3812;Parent=gene:Rv3812;Name=PE_PGRS62-1;biotype=protein_coding;transcript_id=Rv3812 Chromosome ena exon 4276571 4278085 . + . Parent=transcript:Rv3812;Name=Rv3812-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3812-1;rank=1 Chromosome ena CDS 4276571 4278085 . + 0 ID=CDS:Rv3812;Parent=transcript:Rv3812;protein_id=Rv3812 ### -Chromosome ena gene 4278394 4279215 . - . ID=gene:Rv3813c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3813c;logic_name=ena +Chromosome ena gene 4278394 4279215 . - . ID=gene:Rv3813c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3813c;logic_name=ena Chromosome ena mRNA 4278394 4279215 . - . ID=transcript:Rv3813c;Parent=gene:Rv3813c;biotype=protein_coding;transcript_id=Rv3813c Chromosome ena exon 4278394 4279215 . - . Parent=transcript:Rv3813c;Name=Rv3813c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3813c-1;rank=1 Chromosome ena CDS 4278394 4279215 . - 0 ID=CDS:Rv3813c;Parent=transcript:Rv3813c;protein_id=Rv3813c ### -Chromosome ena gene 4279230 4280015 . - . ID=gene:Rv3814c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3814c;logic_name=ena +Chromosome ena gene 4279230 4280015 . - . ID=gene:Rv3814c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3814c;logic_name=ena Chromosome ena mRNA 4279230 4280015 . - . ID=transcript:Rv3814c;Parent=gene:Rv3814c;biotype=protein_coding;transcript_id=Rv3814c Chromosome ena exon 4279230 4280015 . - . Parent=transcript:Rv3814c;Name=Rv3814c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3814c-1;rank=1 Chromosome ena CDS 4279230 4280015 . - 0 ID=CDS:Rv3814c;Parent=transcript:Rv3814c;protein_id=Rv3814c ### -Chromosome ena gene 4280033 4280788 . - . ID=gene:Rv3815c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3815c;logic_name=ena +Chromosome ena gene 4280033 4280788 . - . ID=gene:Rv3815c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3815c;logic_name=ena Chromosome ena mRNA 4280033 4280788 . - . ID=transcript:Rv3815c;Parent=gene:Rv3815c;biotype=protein_coding;transcript_id=Rv3815c Chromosome ena exon 4280033 4280788 . - . Parent=transcript:Rv3815c;Name=Rv3815c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3815c-1;rank=1 Chromosome ena CDS 4280033 4280788 . - 0 ID=CDS:Rv3815c;Parent=transcript:Rv3815c;protein_id=Rv3815c ### -Chromosome ena gene 4280792 4281571 . - . ID=gene:Rv3816c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3816c;logic_name=ena +Chromosome ena gene 4280792 4281571 . - . ID=gene:Rv3816c;biotype=protein_coding;description=Possible acyltransferase;gene_id=Rv3816c;logic_name=ena Chromosome ena mRNA 4280792 4281571 . - . ID=transcript:Rv3816c;Parent=gene:Rv3816c;biotype=protein_coding;transcript_id=Rv3816c Chromosome ena exon 4280792 4281571 . - . Parent=transcript:Rv3816c;Name=Rv3816c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3816c-1;rank=1 Chromosome ena CDS 4280792 4281571 . - 0 ID=CDS:Rv3816c;Parent=transcript:Rv3816c;protein_id=Rv3816c ### -Chromosome ena gene 4281647 4282402 . + . ID=gene:Rv3817;biotype=protein_coding;description=Possible phosphotransferase;gene_id=Rv3817;logic_name=ena +Chromosome ena gene 4281647 4282402 . + . ID=gene:Rv3817;biotype=protein_coding;description=Possible phosphotransferase;gene_id=Rv3817;logic_name=ena Chromosome ena mRNA 4281647 4282402 . + . ID=transcript:Rv3817;Parent=gene:Rv3817;biotype=protein_coding;transcript_id=Rv3817 Chromosome ena exon 4281647 4282402 . + . Parent=transcript:Rv3817;Name=Rv3817-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3817-1;rank=1 Chromosome ena CDS 4281647 4282402 . + 0 ID=CDS:Rv3817;Parent=transcript:Rv3817;protein_id=Rv3817 ### -Chromosome ena gene 4282449 4283999 . + . ID=gene:Rv3818;biotype=protein_coding;description=Unknown protein;gene_id=Rv3818;logic_name=ena +Chromosome ena gene 4282449 4283999 . + . ID=gene:Rv3818;biotype=protein_coding;description=Unknown protein;gene_id=Rv3818;logic_name=ena Chromosome ena mRNA 4282449 4283999 . + . ID=transcript:Rv3818;Parent=gene:Rv3818;biotype=protein_coding;transcript_id=Rv3818 Chromosome ena exon 4282449 4283999 . + . Parent=transcript:Rv3818;Name=Rv3818-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3818-1;rank=1 Chromosome ena CDS 4282449 4283999 . + 0 ID=CDS:Rv3818;Parent=transcript:Rv3818;protein_id=Rv3818 ### -Chromosome ena gene 4283996 4284331 . + . ID=gene:Rv3819;biotype=protein_coding;description=Unknown protein;gene_id=Rv3819;logic_name=ena +Chromosome ena gene 4283996 4284331 . + . ID=gene:Rv3819;biotype=protein_coding;description=Unknown protein;gene_id=Rv3819;logic_name=ena Chromosome ena mRNA 4283996 4284331 . + . ID=transcript:Rv3819;Parent=gene:Rv3819;biotype=protein_coding;transcript_id=Rv3819 Chromosome ena exon 4283996 4284331 . + . Parent=transcript:Rv3819;Name=Rv3819-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3819-1;rank=1 Chromosome ena CDS 4283996 4284331 . + 0 ID=CDS:Rv3819;Parent=transcript:Rv3819;protein_id=Rv3819 ### -Chromosome ena gene 4284419 4285825 . - . ID=gene:Rv3820c;Name=papA2;biotype=protein_coding;description=Possible conserved polyketide synthase associated protein PapA2;gene_id=Rv3820c;logic_name=ena +Chromosome ena gene 4284419 4285825 . - . ID=gene:Rv3820c;Name=papA2;biotype=protein_coding;description=Possible conserved polyketide synthase associated protein PapA2;gene_id=Rv3820c;logic_name=ena Chromosome ena mRNA 4284419 4285825 . - . ID=transcript:Rv3820c;Parent=gene:Rv3820c;Name=papA2-1;biotype=protein_coding;transcript_id=Rv3820c Chromosome ena exon 4284419 4285825 . - . Parent=transcript:Rv3820c;Name=Rv3820c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3820c-1;rank=1 Chromosome ena CDS 4284419 4285825 . - 0 ID=CDS:Rv3820c;Parent=transcript:Rv3820c;protein_id=Rv3820c ### -Chromosome ena gene 4285973 4286686 . + . ID=gene:Rv3821;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3821;logic_name=ena +Chromosome ena gene 4285973 4286686 . + . ID=gene:Rv3821;biotype=protein_coding;description=Probable conserved integral membrane protein;gene_id=Rv3821;logic_name=ena Chromosome ena mRNA 4285973 4286686 . + . ID=transcript:Rv3821;Parent=gene:Rv3821;biotype=protein_coding;transcript_id=Rv3821 Chromosome ena exon 4285973 4286686 . + . Parent=transcript:Rv3821;Name=Rv3821-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3821-1;rank=1 Chromosome ena CDS 4285973 4286686 . + 0 ID=CDS:Rv3821;Parent=transcript:Rv3821;protein_id=Rv3821 ### -Chromosome ena gene 4286721 4287935 . + . ID=gene:Rv3822;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3822;logic_name=ena +Chromosome ena gene 4286721 4287935 . + . ID=gene:Rv3822;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3822;logic_name=ena Chromosome ena mRNA 4286721 4287935 . + . ID=transcript:Rv3822;Parent=gene:Rv3822;biotype=protein_coding;transcript_id=Rv3822 Chromosome ena exon 4286721 4287935 . + . Parent=transcript:Rv3822;Name=Rv3822-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3822-1;rank=1 Chromosome ena CDS 4286721 4287935 . + 0 ID=CDS:Rv3822;Parent=transcript:Rv3822;protein_id=Rv3822 ### -Chromosome ena gene 4288260 4291529 . - . ID=gene:Rv3823c;Name=mmpL8;biotype=protein_coding;description=Conserved integral membrane transport protein MmpL8;gene_id=Rv3823c;logic_name=ena +Chromosome ena gene 4288260 4291529 . - . ID=gene:Rv3823c;Name=mmpL8;biotype=protein_coding;description=Conserved integral membrane transport protein MmpL8;gene_id=Rv3823c;logic_name=ena Chromosome ena mRNA 4288260 4291529 . - . ID=transcript:Rv3823c;Parent=gene:Rv3823c;Name=mmpL8-1;biotype=protein_coding;transcript_id=Rv3823c Chromosome ena exon 4288260 4291529 . - . Parent=transcript:Rv3823c;Name=Rv3823c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3823c-1;rank=1 Chromosome ena CDS 4288260 4291529 . - 0 ID=CDS:Rv3823c;Parent=transcript:Rv3823c;protein_id=Rv3823c ### -Chromosome ena gene 4291639 4293174 . - . ID=gene:Rv3824c;Name=papA1;biotype=protein_coding;description=Conserved polyketide synthase associated protein PapA1;gene_id=Rv3824c;logic_name=ena +Chromosome ena gene 4291639 4293174 . - . ID=gene:Rv3824c;Name=papA1;biotype=protein_coding;description=Conserved polyketide synthase associated protein PapA1;gene_id=Rv3824c;logic_name=ena Chromosome ena mRNA 4291639 4293174 . - . ID=transcript:Rv3824c;Parent=gene:Rv3824c;Name=papA1-1;biotype=protein_coding;transcript_id=Rv3824c Chromosome ena exon 4291639 4293174 . - . Parent=transcript:Rv3824c;Name=Rv3824c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3824c-1;rank=1 Chromosome ena CDS 4291639 4293174 . - 0 ID=CDS:Rv3824c;Parent=transcript:Rv3824c;protein_id=Rv3824c ### -Chromosome ena gene 4293225 4299605 . - . ID=gene:Rv3825c;Name=pks2;biotype=protein_coding;description=Polyketide synthase Pks2;gene_id=Rv3825c;logic_name=ena +Chromosome ena gene 4293225 4299605 . - . ID=gene:Rv3825c;Name=pks2;biotype=protein_coding;description=Polyketide synthase Pks2;gene_id=Rv3825c;logic_name=ena Chromosome ena mRNA 4293225 4299605 . - . ID=transcript:Rv3825c;Parent=gene:Rv3825c;Name=pks2-1;biotype=protein_coding;transcript_id=Rv3825c Chromosome ena exon 4293225 4299605 . - . Parent=transcript:Rv3825c;Name=Rv3825c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3825c-1;rank=1 Chromosome ena CDS 4293225 4299605 . - 0 ID=CDS:Rv3825c;Parent=transcript:Rv3825c;protein_id=Rv3825c ### -Chromosome ena gene 4299812 4301566 . + . ID=gene:Rv3826;Name=fadD23;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD23 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv3826;logic_name=ena +Chromosome ena gene 4299812 4301566 . + . ID=gene:Rv3826;Name=fadD23;biotype=protein_coding;description=Probable fatty-acid-AMP ligase FadD23 (fatty-acid-AMP synthetase) (fatty-acid-AMP synthase);gene_id=Rv3826;logic_name=ena Chromosome ena mRNA 4299812 4301566 . + . ID=transcript:Rv3826;Parent=gene:Rv3826;Name=fadD23-1;biotype=protein_coding;transcript_id=Rv3826 Chromosome ena exon 4299812 4301566 . + . Parent=transcript:Rv3826;Name=Rv3826-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3826-1;rank=1 Chromosome ena CDS 4299812 4301566 . + 0 ID=CDS:Rv3826;Parent=transcript:Rv3826;protein_id=Rv3826 ### -Chromosome ena_mobile_element biological_region 4301543 4303415 . - . external_name=IS1537%2C len: 1873 nt. Insertion sequence IS1537.;logic_name=ena_mobile_element -Chromosome ena gene 4301563 4302789 . - . ID=gene:Rv3827c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3827c;logic_name=ena +Chromosome ena_mobile_element biological_region 4301543 4303415 . - . external_name=IS1537%2C len: 1873 nt. Insertion sequence IS1537.;logic_name=ena_mobile_element +Chromosome ena gene 4301563 4302789 . - . ID=gene:Rv3827c;biotype=protein_coding;description=Possible transposase;gene_id=Rv3827c;logic_name=ena Chromosome ena mRNA 4301563 4302789 . - . ID=transcript:Rv3827c;Parent=gene:Rv3827c;biotype=protein_coding;transcript_id=Rv3827c Chromosome ena exon 4301563 4302789 . - . Parent=transcript:Rv3827c;Name=Rv3827c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3827c-1;rank=1 Chromosome ena CDS 4301563 4302789 . - 0 ID=CDS:Rv3827c;Parent=transcript:Rv3827c;protein_id=Rv3827c ### -Chromosome ena gene 4302786 4303397 . - . ID=gene:Rv3828c;biotype=protein_coding;description=Possible resolvase;gene_id=Rv3828c;logic_name=ena +Chromosome ena gene 4302786 4303397 . - . ID=gene:Rv3828c;biotype=protein_coding;description=Possible resolvase;gene_id=Rv3828c;logic_name=ena Chromosome ena mRNA 4302786 4303397 . - . ID=transcript:Rv3828c;Parent=gene:Rv3828c;biotype=protein_coding;transcript_id=Rv3828c Chromosome ena exon 4302786 4303397 . - . Parent=transcript:Rv3828c;Name=Rv3828c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3828c-1;rank=1 Chromosome ena CDS 4302786 4303397 . - 0 ID=CDS:Rv3828c;Parent=transcript:Rv3828c;protein_id=Rv3828c ### -Chromosome ena gene 4303398 4305008 . - . ID=gene:Rv3829c;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv3829c;logic_name=ena +Chromosome ena gene 4303398 4305008 . - . ID=gene:Rv3829c;biotype=protein_coding;description=Probable dehydrogenase;gene_id=Rv3829c;logic_name=ena Chromosome ena mRNA 4303398 4305008 . - . ID=transcript:Rv3829c;Parent=gene:Rv3829c;biotype=protein_coding;transcript_id=Rv3829c Chromosome ena exon 4303398 4305008 . - . Parent=transcript:Rv3829c;Name=Rv3829c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3829c-1;rank=1 Chromosome ena CDS 4303398 4305008 . - 0 ID=CDS:Rv3829c;Parent=transcript:Rv3829c;protein_id=Rv3829c ### -Chromosome ena gene 4305056 4305685 . - . ID=gene:Rv3830c;biotype=protein_coding;description=Transcriptional regulatory protein (probably TetR-family);gene_id=Rv3830c;logic_name=ena +Chromosome ena gene 4305056 4305685 . - . ID=gene:Rv3830c;biotype=protein_coding;description=Transcriptional regulatory protein (probably TetR-family);gene_id=Rv3830c;logic_name=ena Chromosome ena mRNA 4305056 4305685 . - . ID=transcript:Rv3830c;Parent=gene:Rv3830c;biotype=protein_coding;transcript_id=Rv3830c Chromosome ena exon 4305056 4305685 . - . Parent=transcript:Rv3830c;Name=Rv3830c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3830c-1;rank=1 Chromosome ena CDS 4305056 4305685 . - 0 ID=CDS:Rv3830c;Parent=transcript:Rv3830c;protein_id=Rv3830c ### -Chromosome ena gene 4305757 4306239 . + . ID=gene:Rv3831;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3831;logic_name=ena +Chromosome ena gene 4305757 4306239 . + . ID=gene:Rv3831;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3831;logic_name=ena Chromosome ena mRNA 4305757 4306239 . + . ID=transcript:Rv3831;Parent=gene:Rv3831;biotype=protein_coding;transcript_id=Rv3831 Chromosome ena exon 4305757 4306239 . + . Parent=transcript:Rv3831;Name=Rv3831-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3831-1;rank=1 Chromosome ena CDS 4305757 4306239 . + 0 ID=CDS:Rv3831;Parent=transcript:Rv3831;protein_id=Rv3831 ### -Chromosome ena gene 4306236 4306811 . - . ID=gene:Rv3832c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3832c;logic_name=ena +Chromosome ena gene 4306236 4306811 . - . ID=gene:Rv3832c;biotype=protein_coding;description=Conserved protein;gene_id=Rv3832c;logic_name=ena Chromosome ena mRNA 4306236 4306811 . - . ID=transcript:Rv3832c;Parent=gene:Rv3832c;biotype=protein_coding;transcript_id=Rv3832c Chromosome ena exon 4306236 4306811 . - . Parent=transcript:Rv3832c;Name=Rv3832c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3832c-1;rank=1 Chromosome ena CDS 4306236 4306811 . - 0 ID=CDS:Rv3832c;Parent=transcript:Rv3832c;protein_id=Rv3832c ### -Chromosome ena gene 4306867 4307658 . + . ID=gene:Rv3833;biotype=protein_coding;description=Transcriptional regulatory protein (probably AraC-family);gene_id=Rv3833;logic_name=ena +Chromosome ena gene 4306867 4307658 . + . ID=gene:Rv3833;biotype=protein_coding;description=Transcriptional regulatory protein (probably AraC-family);gene_id=Rv3833;logic_name=ena Chromosome ena mRNA 4306867 4307658 . + . ID=transcript:Rv3833;Parent=gene:Rv3833;biotype=protein_coding;transcript_id=Rv3833 Chromosome ena exon 4306867 4307658 . + . Parent=transcript:Rv3833;Name=Rv3833-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3833-1;rank=1 Chromosome ena CDS 4306867 4307658 . + 0 ID=CDS:Rv3833;Parent=transcript:Rv3833;protein_id=Rv3833 ### -Chromosome ena gene 4307655 4308914 . - . ID=gene:Rv3834c;Name=serS;biotype=protein_coding;description=SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine translase);gene_id=Rv3834c;logic_name=ena +Chromosome ena gene 4307655 4308914 . - . ID=gene:Rv3834c;Name=serS;biotype=protein_coding;description=SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine translase);gene_id=Rv3834c;logic_name=ena Chromosome ena mRNA 4307655 4308914 . - . ID=transcript:Rv3834c;Parent=gene:Rv3834c;Name=serS-1;biotype=protein_coding;transcript_id=Rv3834c Chromosome ena exon 4307655 4308914 . - . Parent=transcript:Rv3834c;Name=Rv3834c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3834c-1;rank=1 Chromosome ena CDS 4307655 4308914 . - 0 ID=CDS:Rv3834c;Parent=transcript:Rv3834c;protein_id=Rv3834c ### -Chromosome ena gene 4309047 4310396 . + . ID=gene:Rv3835;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv3835;logic_name=ena +Chromosome ena gene 4309047 4310396 . + . ID=gene:Rv3835;biotype=protein_coding;description=Conserved membrane protein;gene_id=Rv3835;logic_name=ena Chromosome ena mRNA 4309047 4310396 . + . ID=transcript:Rv3835;Parent=gene:Rv3835;biotype=protein_coding;transcript_id=Rv3835 Chromosome ena exon 4309047 4310396 . + . Parent=transcript:Rv3835;Name=Rv3835-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3835-1;rank=1 Chromosome ena CDS 4309047 4310396 . + 0 ID=CDS:Rv3835;Parent=transcript:Rv3835;protein_id=Rv3835 ### -Chromosome ena gene 4310401 4310814 . + . ID=gene:Rv3836;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3836;logic_name=ena +Chromosome ena gene 4310401 4310814 . + . ID=gene:Rv3836;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3836;logic_name=ena Chromosome ena mRNA 4310401 4310814 . + . ID=transcript:Rv3836;Parent=gene:Rv3836;biotype=protein_coding;transcript_id=Rv3836 Chromosome ena exon 4310401 4310814 . + . Parent=transcript:Rv3836;Name=Rv3836-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3836-1;rank=1 Chromosome ena CDS 4310401 4310814 . + 0 ID=CDS:Rv3836;Parent=transcript:Rv3836;protein_id=Rv3836 ### -Chromosome ena gene 4311009 4311707 . - . ID=gene:Rv3837c;biotype=protein_coding;description=Probable phosphoglycerate mutase (phosphoglyceromutase) (phosphoglycerate phosphomutase);gene_id=Rv3837c;logic_name=ena +Chromosome ena gene 4311009 4311707 . - . ID=gene:Rv3837c;biotype=protein_coding;description=Probable phosphoglycerate mutase (phosphoglyceromutase) (phosphoglycerate phosphomutase);gene_id=Rv3837c;logic_name=ena Chromosome ena mRNA 4311009 4311707 . - . ID=transcript:Rv3837c;Parent=gene:Rv3837c;biotype=protein_coding;transcript_id=Rv3837c Chromosome ena exon 4311009 4311707 . - . Parent=transcript:Rv3837c;Name=Rv3837c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3837c-1;rank=1 Chromosome ena CDS 4311009 4311707 . - 0 ID=CDS:Rv3837c;Parent=transcript:Rv3837c;protein_id=Rv3837c ### -Chromosome ena gene 4311704 4312669 . - . ID=gene:Rv3838c;Name=pheA;biotype=protein_coding;description=Prephenate dehydratase PheA;gene_id=Rv3838c;logic_name=ena +Chromosome ena gene 4311704 4312669 . - . ID=gene:Rv3838c;Name=pheA;biotype=protein_coding;description=Prephenate dehydratase PheA;gene_id=Rv3838c;logic_name=ena Chromosome ena mRNA 4311704 4312669 . - . ID=transcript:Rv3838c;Parent=gene:Rv3838c;Name=pheA-1;biotype=protein_coding;transcript_id=Rv3838c Chromosome ena exon 4311704 4312669 . - . Parent=transcript:Rv3838c;Name=Rv3838c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3838c-1;rank=1 Chromosome ena CDS 4311704 4312669 . - 0 ID=CDS:Rv3838c;Parent=transcript:Rv3838c;protein_id=Rv3838c ### -Chromosome ena gene 4312765 4313541 . + . ID=gene:Rv3839;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3839;logic_name=ena +Chromosome ena gene 4312765 4313541 . + . ID=gene:Rv3839;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3839;logic_name=ena Chromosome ena mRNA 4312765 4313541 . + . ID=transcript:Rv3839;Parent=gene:Rv3839;biotype=protein_coding;transcript_id=Rv3839 Chromosome ena exon 4312765 4313541 . + . Parent=transcript:Rv3839;Name=Rv3839-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3839-1;rank=1 Chromosome ena CDS 4312765 4313541 . + 0 ID=CDS:Rv3839;Parent=transcript:Rv3839;protein_id=Rv3839 ### -Chromosome ena gene 4313567 4313980 . + . ID=gene:Rv3840;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3840;logic_name=ena +Chromosome ena gene 4313567 4313980 . + . ID=gene:Rv3840;biotype=protein_coding;description=Possible transcriptional regulatory protein;gene_id=Rv3840;logic_name=ena Chromosome ena mRNA 4313567 4313980 . + . ID=transcript:Rv3840;Parent=gene:Rv3840;biotype=protein_coding;transcript_id=Rv3840 Chromosome ena exon 4313567 4313980 . + . Parent=transcript:Rv3840;Name=Rv3840-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3840-1;rank=1 Chromosome ena CDS 4313567 4313980 . + 0 ID=CDS:Rv3840;Parent=transcript:Rv3840;protein_id=Rv3840 ### -Chromosome ena gene 4314178 4314723 . + . ID=gene:Rv3841;Name=bfrB;biotype=protein_coding;description=Bacterioferritin BfrB;gene_id=Rv3841;logic_name=ena +Chromosome ena gene 4314178 4314723 . + . ID=gene:Rv3841;Name=bfrB;biotype=protein_coding;description=Bacterioferritin BfrB;gene_id=Rv3841;logic_name=ena Chromosome ena mRNA 4314178 4314723 . + . ID=transcript:Rv3841;Parent=gene:Rv3841;Name=bfrB-1;biotype=protein_coding;transcript_id=Rv3841 Chromosome ena exon 4314178 4314723 . + . Parent=transcript:Rv3841;Name=Rv3841-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3841-1;rank=1 Chromosome ena CDS 4314178 4314723 . + 0 ID=CDS:Rv3841;Parent=transcript:Rv3841;protein_id=Rv3841 ### -Chromosome ena gene 4314738 4315562 . - . ID=gene:Rv3842c;Name=glpQ1;biotype=protein_coding;description=Probable glycerophosphoryl diester phosphodiesterase GlpQ1 (glycerophosphodiester phosphodiesterase);gene_id=Rv3842c;logic_name=ena +Chromosome ena gene 4314738 4315562 . - . ID=gene:Rv3842c;Name=glpQ1;biotype=protein_coding;description=Probable glycerophosphoryl diester phosphodiesterase GlpQ1 (glycerophosphodiester phosphodiesterase);gene_id=Rv3842c;logic_name=ena Chromosome ena mRNA 4314738 4315562 . - . ID=transcript:Rv3842c;Parent=gene:Rv3842c;Name=glpQ1-1;biotype=protein_coding;transcript_id=Rv3842c Chromosome ena exon 4314738 4315562 . - . Parent=transcript:Rv3842c;Name=Rv3842c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3842c-1;rank=1 Chromosome ena CDS 4314738 4315562 . - 0 ID=CDS:Rv3842c;Parent=transcript:Rv3842c;protein_id=Rv3842c @@ -20185,7 +20185,7 @@ Chromosome ena transcript 4314798 4314891 . + . ID=transcript:EBG00000313356;Par Chromosome ena exon 4314798 4314891 . + . Parent=transcript:EBG00000313356;Name=EBG00000313356;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313356;rank=1 ### Chromosome ena_gene biological_region 4314798 4314891 . + . external_name=AL123456.3:gene:4314798..4314891;logic_name=ena_gene -Chromosome ena gene 4315568 4316596 . - . ID=gene:Rv3843c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3843c;logic_name=ena +Chromosome ena gene 4315568 4316596 . - . ID=gene:Rv3843c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3843c;logic_name=ena Chromosome ena mRNA 4315568 4316596 . - . ID=transcript:Rv3843c;Parent=gene:Rv3843c;biotype=protein_coding;transcript_id=Rv3843c Chromosome ena exon 4315568 4316596 . - . Parent=transcript:Rv3843c;Name=Rv3843c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3843c-1;rank=1 Chromosome ena CDS 4315568 4316596 . - 0 ID=CDS:Rv3843c;Parent=transcript:Rv3843c;protein_id=Rv3843c @@ -20195,407 +20195,407 @@ Chromosome ena transcript 4317073 4317165 . + . ID=transcript:EBG00000313375;Par Chromosome ena exon 4317073 4317165 . + . Parent=transcript:EBG00000313375;Name=EBG00000313375;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=EBG00000313375;rank=1 ### Chromosome ena_gene biological_region 4317073 4317165 . + . external_name=AL123456.3:gene:4317073..4317165;logic_name=ena_gene -Chromosome ena gene 4318775 4319266 . + . ID=gene:Rv3844;biotype=protein_coding;description=Possible transposase;gene_id=Rv3844;logic_name=ena +Chromosome ena gene 4318775 4319266 . + . ID=gene:Rv3844;biotype=protein_coding;description=Possible transposase;gene_id=Rv3844;logic_name=ena Chromosome ena mRNA 4318775 4319266 . + . ID=transcript:Rv3844;Parent=gene:Rv3844;biotype=protein_coding;transcript_id=Rv3844 Chromosome ena exon 4318775 4319266 . + . Parent=transcript:Rv3844;Name=Rv3844-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3844-1;rank=1 Chromosome ena CDS 4318775 4319266 . + 0 ID=CDS:Rv3844;Parent=transcript:Rv3844;protein_id=Rv3844 ### -Chromosome ena gene 4319281 4319640 . + . ID=gene:Rv3845;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3845;logic_name=ena +Chromosome ena gene 4319281 4319640 . + . ID=gene:Rv3845;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3845;logic_name=ena Chromosome ena mRNA 4319281 4319640 . + . ID=transcript:Rv3845;Parent=gene:Rv3845;biotype=protein_coding;transcript_id=Rv3845 Chromosome ena exon 4319281 4319640 . + . Parent=transcript:Rv3845;Name=Rv3845-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3845-1;rank=1 Chromosome ena CDS 4319281 4319640 . + 0 ID=CDS:Rv3845;Parent=transcript:Rv3845;protein_id=Rv3845 ### -Chromosome ena gene 4320704 4321327 . + . ID=gene:Rv3846;Name=sodA;biotype=protein_coding;description=Superoxide dismutase [FE] SodA;gene_id=Rv3846;logic_name=ena +Chromosome ena gene 4320704 4321327 . + . ID=gene:Rv3846;Name=sodA;biotype=protein_coding;description=Superoxide dismutase [FE] SodA;gene_id=Rv3846;logic_name=ena Chromosome ena mRNA 4320704 4321327 . + . ID=transcript:Rv3846;Parent=gene:Rv3846;Name=sodA-1;biotype=protein_coding;transcript_id=Rv3846 Chromosome ena exon 4320704 4321327 . + . Parent=transcript:Rv3846;Name=Rv3846-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3846-1;rank=1 Chromosome ena CDS 4320704 4321327 . + 0 ID=CDS:Rv3846;Parent=transcript:Rv3846;protein_id=Rv3846 ### -Chromosome ena gene 4321538 4322071 . + . ID=gene:Rv3847;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3847;logic_name=ena +Chromosome ena gene 4321538 4322071 . + . ID=gene:Rv3847;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3847;logic_name=ena Chromosome ena mRNA 4321538 4322071 . + . ID=transcript:Rv3847;Parent=gene:Rv3847;biotype=protein_coding;transcript_id=Rv3847 Chromosome ena exon 4321538 4322071 . + . Parent=transcript:Rv3847;Name=Rv3847-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3847-1;rank=1 Chromosome ena CDS 4321538 4322071 . + 0 ID=CDS:Rv3847;Parent=transcript:Rv3847;protein_id=Rv3847 ### -Chromosome ena gene 4322326 4323234 . + . ID=gene:Rv3848;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3848;logic_name=ena +Chromosome ena gene 4322326 4323234 . + . ID=gene:Rv3848;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3848;logic_name=ena Chromosome ena mRNA 4322326 4323234 . + . ID=transcript:Rv3848;Parent=gene:Rv3848;biotype=protein_coding;transcript_id=Rv3848 Chromosome ena exon 4322326 4323234 . + . Parent=transcript:Rv3848;Name=Rv3848-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3848-1;rank=1 Chromosome ena CDS 4322326 4323234 . + 0 ID=CDS:Rv3848;Parent=transcript:Rv3848;protein_id=Rv3848 ### -Chromosome ena gene 4323499 4323897 . + . ID=gene:Rv3849;Name=espR;biotype=protein_coding;description=ESX-1 transcriptional regulatory protein EspR;gene_id=Rv3849;logic_name=ena +Chromosome ena gene 4323499 4323897 . + . ID=gene:Rv3849;Name=espR;biotype=protein_coding;description=ESX-1 transcriptional regulatory protein EspR;gene_id=Rv3849;logic_name=ena Chromosome ena mRNA 4323499 4323897 . + . ID=transcript:Rv3849;Parent=gene:Rv3849;Name=espR-1;biotype=protein_coding;transcript_id=Rv3849 Chromosome ena exon 4323499 4323897 . + . Parent=transcript:Rv3849;Name=Rv3849-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3849-1;rank=1 Chromosome ena CDS 4323499 4323897 . + 0 ID=CDS:Rv3849;Parent=transcript:Rv3849;protein_id=Rv3849 ### -Chromosome ena gene 4324015 4324671 . + . ID=gene:Rv3850;biotype=protein_coding;description=Conserved protein;gene_id=Rv3850;logic_name=ena +Chromosome ena gene 4324015 4324671 . + . ID=gene:Rv3850;biotype=protein_coding;description=Conserved protein;gene_id=Rv3850;logic_name=ena Chromosome ena mRNA 4324015 4324671 . + . ID=transcript:Rv3850;Parent=gene:Rv3850;biotype=protein_coding;transcript_id=Rv3850 Chromosome ena exon 4324015 4324671 . + . Parent=transcript:Rv3850;Name=Rv3850-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3850-1;rank=1 Chromosome ena CDS 4324015 4324671 . + 0 ID=CDS:Rv3850;Parent=transcript:Rv3850;protein_id=Rv3850 ### -Chromosome ena gene 4324683 4324967 . + . ID=gene:Rv3851;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3851;logic_name=ena +Chromosome ena gene 4324683 4324967 . + . ID=gene:Rv3851;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3851;logic_name=ena Chromosome ena mRNA 4324683 4324967 . + . ID=transcript:Rv3851;Parent=gene:Rv3851;biotype=protein_coding;transcript_id=Rv3851 Chromosome ena exon 4324683 4324967 . + . Parent=transcript:Rv3851;Name=Rv3851-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3851-1;rank=1 Chromosome ena CDS 4324683 4324967 . + 0 ID=CDS:Rv3851;Parent=transcript:Rv3851;protein_id=Rv3851 ### -Chromosome ena gene 4325074 4325478 . + . ID=gene:Rv3852;Name=hns;biotype=protein_coding;description=Possible histone-like protein Hns;gene_id=Rv3852;logic_name=ena +Chromosome ena gene 4325074 4325478 . + . ID=gene:Rv3852;Name=hns;biotype=protein_coding;description=Possible histone-like protein Hns;gene_id=Rv3852;logic_name=ena Chromosome ena mRNA 4325074 4325478 . + . ID=transcript:Rv3852;Parent=gene:Rv3852;Name=hns-1;biotype=protein_coding;transcript_id=Rv3852 Chromosome ena exon 4325074 4325478 . + . Parent=transcript:Rv3852;Name=Rv3852-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3852-1;rank=1 Chromosome ena CDS 4325074 4325478 . + 0 ID=CDS:Rv3852;Parent=transcript:Rv3852;protein_id=Rv3852 ### -Chromosome ena gene 4325495 4325968 . + . ID=gene:Rv3853;Name=rraA;biotype=protein_coding;description=Regulator of RNase E activity a RraA;gene_id=Rv3853;logic_name=ena +Chromosome ena gene 4325495 4325968 . + . ID=gene:Rv3853;Name=rraA;biotype=protein_coding;description=Regulator of RNase E activity a RraA;gene_id=Rv3853;logic_name=ena Chromosome ena mRNA 4325495 4325968 . + . ID=transcript:Rv3853;Parent=gene:Rv3853;Name=rraA-1;biotype=protein_coding;transcript_id=Rv3853 Chromosome ena exon 4325495 4325968 . + . Parent=transcript:Rv3853;Name=Rv3853-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3853-1;rank=1 Chromosome ena CDS 4325495 4325968 . + 0 ID=CDS:Rv3853;Parent=transcript:Rv3853;protein_id=Rv3853 ### -Chromosome ena gene 4326004 4327473 . - . ID=gene:Rv3854c;Name=ethA;biotype=protein_coding;description=Monooxygenase EthA;gene_id=Rv3854c;logic_name=ena +Chromosome ena gene 4326004 4327473 . - . ID=gene:Rv3854c;Name=ethA;biotype=protein_coding;description=Monooxygenase EthA;gene_id=Rv3854c;logic_name=ena Chromosome ena mRNA 4326004 4327473 . - . ID=transcript:Rv3854c;Parent=gene:Rv3854c;Name=ethA-1;biotype=protein_coding;transcript_id=Rv3854c Chromosome ena exon 4326004 4327473 . - . Parent=transcript:Rv3854c;Name=Rv3854c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3854c-1;rank=1 Chromosome ena CDS 4326004 4327473 . - 0 ID=CDS:Rv3854c;Parent=transcript:Rv3854c;protein_id=Rv3854c ### -Chromosome ena gene 4327549 4328199 . + . ID=gene:Rv3855;Name=ethR;biotype=protein_coding;description=Transcriptional regulatory repressor protein (TetR-family) EthR;gene_id=Rv3855;logic_name=ena +Chromosome ena gene 4327549 4328199 . + . ID=gene:Rv3855;Name=ethR;biotype=protein_coding;description=Transcriptional regulatory repressor protein (TetR-family) EthR;gene_id=Rv3855;logic_name=ena Chromosome ena mRNA 4327549 4328199 . + . ID=transcript:Rv3855;Parent=gene:Rv3855;Name=ethR-1;biotype=protein_coding;transcript_id=Rv3855 Chromosome ena exon 4327549 4328199 . + . Parent=transcript:Rv3855;Name=Rv3855-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3855-1;rank=1 Chromosome ena CDS 4327549 4328199 . + 0 ID=CDS:Rv3855;Parent=transcript:Rv3855;protein_id=Rv3855 ### -Chromosome ena gene 4328401 4329408 . - . ID=gene:Rv3856c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3856c;logic_name=ena +Chromosome ena gene 4328401 4329408 . - . ID=gene:Rv3856c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3856c;logic_name=ena Chromosome ena mRNA 4328401 4329408 . - . ID=transcript:Rv3856c;Parent=gene:Rv3856c;biotype=protein_coding;transcript_id=Rv3856c Chromosome ena exon 4328401 4329408 . - . Parent=transcript:Rv3856c;Name=Rv3856c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3856c-1;rank=1 Chromosome ena CDS 4328401 4329408 . - 0 ID=CDS:Rv3856c;Parent=transcript:Rv3856c;protein_id=Rv3856c ### -Chromosome ena gene 4329417 4329614 . - . ID=gene:Rv3857c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3857c;logic_name=ena +Chromosome ena gene 4329417 4329614 . - . ID=gene:Rv3857c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3857c;logic_name=ena Chromosome ena mRNA 4329417 4329614 . - . ID=transcript:Rv3857c;Parent=gene:Rv3857c;biotype=protein_coding;transcript_id=Rv3857c Chromosome ena exon 4329417 4329614 . - . Parent=transcript:Rv3857c;Name=Rv3857c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3857c-1;rank=1 Chromosome ena CDS 4329417 4329614 . - 0 ID=CDS:Rv3857c;Parent=transcript:Rv3857c;protein_id=Rv3857c ### -Chromosome ena gene 4330039 4331505 . - . ID=gene:Rv3858c;Name=gltD;biotype=protein_coding;description=Probable NADH-dependent glutamate synthase (small subunit) GltD (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH)) (GLTS beta chain) (NADPH-GOGAT);gene_id=Rv3858c;logic_name=ena +Chromosome ena gene 4330039 4331505 . - . ID=gene:Rv3858c;Name=gltD;biotype=protein_coding;description=Probable NADH-dependent glutamate synthase (small subunit) GltD (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH)) (GLTS beta chain) (NADPH-GOGAT);gene_id=Rv3858c;logic_name=ena Chromosome ena mRNA 4330039 4331505 . - . ID=transcript:Rv3858c;Parent=gene:Rv3858c;Name=gltD-1;biotype=protein_coding;transcript_id=Rv3858c Chromosome ena exon 4330039 4331505 . - . Parent=transcript:Rv3858c;Name=Rv3858c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3858c-1;rank=1 Chromosome ena CDS 4330039 4331505 . - 0 ID=CDS:Rv3858c;Parent=transcript:Rv3858c;protein_id=Rv3858c ### -Chromosome ena gene 4331498 4336081 . - . ID=gene:Rv3859c;Name=gltB;biotype=protein_coding;description=Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT);gene_id=Rv3859c;logic_name=ena +Chromosome ena gene 4331498 4336081 . - . ID=gene:Rv3859c;Name=gltB;biotype=protein_coding;description=Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT);gene_id=Rv3859c;logic_name=ena Chromosome ena mRNA 4331498 4336081 . - . ID=transcript:Rv3859c;Parent=gene:Rv3859c;Name=gltB-1;biotype=protein_coding;transcript_id=Rv3859c Chromosome ena exon 4331498 4336081 . - . Parent=transcript:Rv3859c;Name=Rv3859c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3859c-1;rank=1 Chromosome ena CDS 4331498 4336081 . - 0 ID=CDS:Rv3859c;Parent=transcript:Rv3859c;protein_id=Rv3859c ### -Chromosome ena gene 4336777 4337949 . + . ID=gene:Rv3860;biotype=protein_coding;description=Conserved protein;gene_id=Rv3860;logic_name=ena +Chromosome ena gene 4336777 4337949 . + . ID=gene:Rv3860;biotype=protein_coding;description=Conserved protein;gene_id=Rv3860;logic_name=ena Chromosome ena mRNA 4336777 4337949 . + . ID=transcript:Rv3860;Parent=gene:Rv3860;biotype=protein_coding;transcript_id=Rv3860 Chromosome ena exon 4336777 4337949 . + . Parent=transcript:Rv3860;Name=Rv3860-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3860-1;rank=1 Chromosome ena CDS 4336777 4337949 . + 0 ID=CDS:Rv3860;Parent=transcript:Rv3860;protein_id=Rv3860 ### -Chromosome ena gene 4337946 4338272 . + . ID=gene:Rv3861;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3861;logic_name=ena +Chromosome ena gene 4337946 4338272 . + . ID=gene:Rv3861;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3861;logic_name=ena Chromosome ena mRNA 4337946 4338272 . + . ID=transcript:Rv3861;Parent=gene:Rv3861;biotype=protein_coding;transcript_id=Rv3861 Chromosome ena exon 4337946 4338272 . + . Parent=transcript:Rv3861;Name=Rv3861-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3861-1;rank=1 Chromosome ena CDS 4337946 4338272 . + 0 ID=CDS:Rv3861;Parent=transcript:Rv3861;protein_id=Rv3861 ### -Chromosome ena gene 4338171 4338521 . - . ID=gene:Rv3862c;Name=whiB6;biotype=protein_coding;description=Possible transcriptional regulatory protein WhiB-like WhiB6;gene_id=Rv3862c;logic_name=ena +Chromosome ena gene 4338171 4338521 . - . ID=gene:Rv3862c;Name=whiB6;biotype=protein_coding;description=Possible transcriptional regulatory protein WhiB-like WhiB6;gene_id=Rv3862c;logic_name=ena Chromosome ena mRNA 4338171 4338521 . - . ID=transcript:Rv3862c;Parent=gene:Rv3862c;Name=whiB6-1;biotype=protein_coding;transcript_id=Rv3862c Chromosome ena exon 4338171 4338521 . - . Parent=transcript:Rv3862c;Name=Rv3862c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3862c-1;rank=1 Chromosome ena CDS 4338171 4338521 . - 0 ID=CDS:Rv3862c;Parent=transcript:Rv3862c;protein_id=Rv3862c ### -Chromosome ena gene 4338849 4340027 . + . ID=gene:Rv3863;biotype=protein_coding;description=Unknown alanine rich protein;gene_id=Rv3863;logic_name=ena +Chromosome ena gene 4338849 4340027 . + . ID=gene:Rv3863;biotype=protein_coding;description=Unknown alanine rich protein;gene_id=Rv3863;logic_name=ena Chromosome ena mRNA 4338849 4340027 . + . ID=transcript:Rv3863;Parent=gene:Rv3863;biotype=protein_coding;transcript_id=Rv3863 Chromosome ena exon 4338849 4340027 . + . Parent=transcript:Rv3863;Name=Rv3863-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3863-1;rank=1 Chromosome ena CDS 4338849 4340027 . + 0 ID=CDS:Rv3863;Parent=transcript:Rv3863;protein_id=Rv3863 ### -Chromosome ena gene 4340270 4341478 . + . ID=gene:Rv3864;Name=espE;biotype=protein_coding;description=ESX-1 secretion-associated protein EspE;gene_id=Rv3864;logic_name=ena +Chromosome ena gene 4340270 4341478 . + . ID=gene:Rv3864;Name=espE;biotype=protein_coding;description=ESX-1 secretion-associated protein EspE;gene_id=Rv3864;logic_name=ena Chromosome ena mRNA 4340270 4341478 . + . ID=transcript:Rv3864;Parent=gene:Rv3864;Name=espE-1;biotype=protein_coding;transcript_id=Rv3864 Chromosome ena exon 4340270 4341478 . + . Parent=transcript:Rv3864;Name=Rv3864-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3864-1;rank=1 Chromosome ena CDS 4340270 4341478 . + 0 ID=CDS:Rv3864;Parent=transcript:Rv3864;protein_id=Rv3864 ### -Chromosome ena gene 4341566 4341877 . + . ID=gene:Rv3865;Name=espF;biotype=protein_coding;description=ESX-1 secretion-associated protein EspF;gene_id=Rv3865;logic_name=ena +Chromosome ena gene 4341566 4341877 . + . ID=gene:Rv3865;Name=espF;biotype=protein_coding;description=ESX-1 secretion-associated protein EspF;gene_id=Rv3865;logic_name=ena Chromosome ena mRNA 4341566 4341877 . + . ID=transcript:Rv3865;Parent=gene:Rv3865;Name=espF-1;biotype=protein_coding;transcript_id=Rv3865 Chromosome ena exon 4341566 4341877 . + . Parent=transcript:Rv3865;Name=Rv3865-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3865-1;rank=1 Chromosome ena CDS 4341566 4341877 . + 0 ID=CDS:Rv3865;Parent=transcript:Rv3865;protein_id=Rv3865 ### -Chromosome ena gene 4341880 4342731 . + . ID=gene:Rv3866;Name=espG1;biotype=protein_coding;description=ESX-1 secretion-associated protein EspG1;gene_id=Rv3866;logic_name=ena +Chromosome ena gene 4341880 4342731 . + . ID=gene:Rv3866;Name=espG1;biotype=protein_coding;description=ESX-1 secretion-associated protein EspG1;gene_id=Rv3866;logic_name=ena Chromosome ena mRNA 4341880 4342731 . + . ID=transcript:Rv3866;Parent=gene:Rv3866;Name=espG1-1;biotype=protein_coding;transcript_id=Rv3866 Chromosome ena exon 4341880 4342731 . + . Parent=transcript:Rv3866;Name=Rv3866-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3866-1;rank=1 Chromosome ena CDS 4341880 4342731 . + 0 ID=CDS:Rv3866;Parent=transcript:Rv3866;protein_id=Rv3866 ### -Chromosome ena gene 4342770 4343321 . + . ID=gene:Rv3867;Name=espH;biotype=protein_coding;description=ESX-1 secretion-associated protein EspH;gene_id=Rv3867;logic_name=ena +Chromosome ena gene 4342770 4343321 . + . ID=gene:Rv3867;Name=espH;biotype=protein_coding;description=ESX-1 secretion-associated protein EspH;gene_id=Rv3867;logic_name=ena Chromosome ena mRNA 4342770 4343321 . + . ID=transcript:Rv3867;Parent=gene:Rv3867;Name=espH-1;biotype=protein_coding;transcript_id=Rv3867 Chromosome ena exon 4342770 4343321 . + . Parent=transcript:Rv3867;Name=Rv3867-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3867-1;rank=1 Chromosome ena CDS 4342770 4343321 . + 0 ID=CDS:Rv3867;Parent=transcript:Rv3867;protein_id=Rv3867 ### -Chromosome ena gene 4343314 4345035 . + . ID=gene:Rv3868;Name=eccA1;biotype=protein_coding;description=ESX conserved component EccA1. ESX-1 type VII secretion system protein.;gene_id=Rv3868;logic_name=ena +Chromosome ena gene 4343314 4345035 . + . ID=gene:Rv3868;Name=eccA1;biotype=protein_coding;description=ESX conserved component EccA1. ESX-1 type VII secretion system protein.;gene_id=Rv3868;logic_name=ena Chromosome ena mRNA 4343314 4345035 . + . ID=transcript:Rv3868;Parent=gene:Rv3868;Name=eccA1-1;biotype=protein_coding;transcript_id=Rv3868 Chromosome ena exon 4343314 4345035 . + . Parent=transcript:Rv3868;Name=Rv3868-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3868-1;rank=1 Chromosome ena CDS 4343314 4345035 . + 0 ID=CDS:Rv3868;Parent=transcript:Rv3868;protein_id=Rv3868 ### -Chromosome ena gene 4345039 4346481 . + . ID=gene:Rv3869;Name=eccB1;biotype=protein_coding;description=ESX conserved component EccB1. ESX-1 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3869;logic_name=ena +Chromosome ena gene 4345039 4346481 . + . ID=gene:Rv3869;Name=eccB1;biotype=protein_coding;description=ESX conserved component EccB1. ESX-1 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3869;logic_name=ena Chromosome ena mRNA 4345039 4346481 . + . ID=transcript:Rv3869;Parent=gene:Rv3869;Name=eccB1-1;biotype=protein_coding;transcript_id=Rv3869 Chromosome ena exon 4345039 4346481 . + . Parent=transcript:Rv3869;Name=Rv3869-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3869-1;rank=1 Chromosome ena CDS 4345039 4346481 . + 0 ID=CDS:Rv3869;Parent=transcript:Rv3869;protein_id=Rv3869 ### -Chromosome ena gene 4346481 4348724 . + . ID=gene:Rv3870;Name=eccCa1;biotype=protein_coding;description=ESX conserved component EccCa1. ESX-1 type VII secretion system protein. Possible transmembrane protein.;gene_id=Rv3870;logic_name=ena +Chromosome ena gene 4346481 4348724 . + . ID=gene:Rv3870;Name=eccCa1;biotype=protein_coding;description=ESX conserved component EccCa1. ESX-1 type VII secretion system protein. Possible transmembrane protein.;gene_id=Rv3870;logic_name=ena Chromosome ena mRNA 4346481 4348724 . + . ID=transcript:Rv3870;Parent=gene:Rv3870;Name=eccCa1-1;biotype=protein_coding;transcript_id=Rv3870 Chromosome ena exon 4346481 4348724 . + . Parent=transcript:Rv3870;Name=Rv3870-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3870-1;rank=1 Chromosome ena CDS 4346481 4348724 . + 0 ID=CDS:Rv3870;Parent=transcript:Rv3870;protein_id=Rv3870 ### -Chromosome ena gene 4348827 4350602 . + . ID=gene:Rv3871;Name=eccCb1;biotype=protein_coding;description=ESX conserved component EccCb1. ESX-1 type VII secretion system protein.;gene_id=Rv3871;logic_name=ena +Chromosome ena gene 4348827 4350602 . + . ID=gene:Rv3871;Name=eccCb1;biotype=protein_coding;description=ESX conserved component EccCb1. ESX-1 type VII secretion system protein.;gene_id=Rv3871;logic_name=ena Chromosome ena mRNA 4348827 4350602 . + . ID=transcript:Rv3871;Parent=gene:Rv3871;Name=eccCb1-1;biotype=protein_coding;transcript_id=Rv3871 Chromosome ena exon 4348827 4350602 . + . Parent=transcript:Rv3871;Name=Rv3871-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3871-1;rank=1 Chromosome ena CDS 4348827 4350602 . + 0 ID=CDS:Rv3871;Parent=transcript:Rv3871;protein_id=Rv3871 ### -Chromosome ena gene 4350745 4351044 . + . ID=gene:Rv3872;Name=PE35;biotype=protein_coding;description=PE family-related protein PE35;gene_id=Rv3872;logic_name=ena +Chromosome ena gene 4350745 4351044 . + . ID=gene:Rv3872;Name=PE35;biotype=protein_coding;description=PE family-related protein PE35;gene_id=Rv3872;logic_name=ena Chromosome ena mRNA 4350745 4351044 . + . ID=transcript:Rv3872;Parent=gene:Rv3872;Name=PE35-1;biotype=protein_coding;transcript_id=Rv3872 Chromosome ena exon 4350745 4351044 . + . Parent=transcript:Rv3872;Name=Rv3872-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3872-1;rank=1 Chromosome ena CDS 4350745 4351044 . + 0 ID=CDS:Rv3872;Parent=transcript:Rv3872;protein_id=Rv3872 ### -Chromosome ena gene 4351075 4352181 . + . ID=gene:Rv3873;Name=PPE68;biotype=protein_coding;description=PPE family protein PPE68;gene_id=Rv3873;logic_name=ena +Chromosome ena gene 4351075 4352181 . + . ID=gene:Rv3873;Name=PPE68;biotype=protein_coding;description=PPE family protein PPE68;gene_id=Rv3873;logic_name=ena Chromosome ena mRNA 4351075 4352181 . + . ID=transcript:Rv3873;Parent=gene:Rv3873;Name=PPE68-1;biotype=protein_coding;transcript_id=Rv3873 Chromosome ena exon 4351075 4352181 . + . Parent=transcript:Rv3873;Name=Rv3873-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3873-1;rank=1 Chromosome ena CDS 4351075 4352181 . + 0 ID=CDS:Rv3873;Parent=transcript:Rv3873;protein_id=Rv3873 ### -Chromosome ena gene 4352274 4352576 . + . ID=gene:Rv3874;Name=esxB;biotype=protein_coding;description=10 kDa culture filtrate antigen EsxB (LHP) (CFP10);gene_id=Rv3874;logic_name=ena +Chromosome ena gene 4352274 4352576 . + . ID=gene:Rv3874;Name=esxB;biotype=protein_coding;description=10 kDa culture filtrate antigen EsxB (LHP) (CFP10);gene_id=Rv3874;logic_name=ena Chromosome ena mRNA 4352274 4352576 . + . ID=transcript:Rv3874;Parent=gene:Rv3874;Name=esxB-1;biotype=protein_coding;transcript_id=Rv3874 Chromosome ena exon 4352274 4352576 . + . Parent=transcript:Rv3874;Name=Rv3874-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3874-1;rank=1 Chromosome ena CDS 4352274 4352576 . + 0 ID=CDS:Rv3874;Parent=transcript:Rv3874;protein_id=Rv3874 ### -Chromosome ena gene 4352609 4352896 . + . ID=gene:Rv3875;Name=esxA;biotype=protein_coding;description=6 kDa early secretory antigenic target EsxA (ESAT-6);gene_id=Rv3875;logic_name=ena +Chromosome ena gene 4352609 4352896 . + . ID=gene:Rv3875;Name=esxA;biotype=protein_coding;description=6 kDa early secretory antigenic target EsxA (ESAT-6);gene_id=Rv3875;logic_name=ena Chromosome ena mRNA 4352609 4352896 . + . ID=transcript:Rv3875;Parent=gene:Rv3875;Name=esxA-1;biotype=protein_coding;transcript_id=Rv3875 Chromosome ena exon 4352609 4352896 . + . Parent=transcript:Rv3875;Name=Rv3875-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3875-1;rank=1 Chromosome ena CDS 4352609 4352896 . + 0 ID=CDS:Rv3875;Parent=transcript:Rv3875;protein_id=Rv3875 ### -Chromosome ena gene 4353010 4355010 . + . ID=gene:Rv3876;Name=espI;biotype=protein_coding;description=ESX-1 secretion-associated protein EspI. Conserved proline and alanine rich protein.;gene_id=Rv3876;logic_name=ena +Chromosome ena gene 4353010 4355010 . + . ID=gene:Rv3876;Name=espI;biotype=protein_coding;description=ESX-1 secretion-associated protein EspI. Conserved proline and alanine rich protein.;gene_id=Rv3876;logic_name=ena Chromosome ena mRNA 4353010 4355010 . + . ID=transcript:Rv3876;Parent=gene:Rv3876;Name=espI-1;biotype=protein_coding;transcript_id=Rv3876 Chromosome ena exon 4353010 4355010 . + . Parent=transcript:Rv3876;Name=Rv3876-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3876-1;rank=1 Chromosome ena CDS 4353010 4355010 . + 0 ID=CDS:Rv3876;Parent=transcript:Rv3876;protein_id=Rv3876 ### -Chromosome ena gene 4355007 4356542 . + . ID=gene:Rv3877;Name=eccD1;biotype=protein_coding;description=ESX conserved component EccD1. ESX-1 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv3877;logic_name=ena +Chromosome ena gene 4355007 4356542 . + . ID=gene:Rv3877;Name=eccD1;biotype=protein_coding;description=ESX conserved component EccD1. ESX-1 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv3877;logic_name=ena Chromosome ena mRNA 4355007 4356542 . + . ID=transcript:Rv3877;Parent=gene:Rv3877;Name=eccD1-1;biotype=protein_coding;transcript_id=Rv3877 Chromosome ena exon 4355007 4356542 . + . Parent=transcript:Rv3877;Name=Rv3877-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3877-1;rank=1 Chromosome ena CDS 4355007 4356542 . + 0 ID=CDS:Rv3877;Parent=transcript:Rv3877;protein_id=Rv3877 ### -Chromosome ena gene 4356693 4357535 . + . ID=gene:Rv3878;Name=espJ;biotype=protein_coding;description=ESX-1 secretion-associated protein EspJ. Conserved alanine rich protein.;gene_id=Rv3878;logic_name=ena +Chromosome ena gene 4356693 4357535 . + . ID=gene:Rv3878;Name=espJ;biotype=protein_coding;description=ESX-1 secretion-associated protein EspJ. Conserved alanine rich protein.;gene_id=Rv3878;logic_name=ena Chromosome ena mRNA 4356693 4357535 . + . ID=transcript:Rv3878;Parent=gene:Rv3878;Name=espJ-1;biotype=protein_coding;transcript_id=Rv3878 Chromosome ena exon 4356693 4357535 . + . Parent=transcript:Rv3878;Name=Rv3878-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3878-1;rank=1 Chromosome ena CDS 4356693 4357535 . + 0 ID=CDS:Rv3878;Parent=transcript:Rv3878;protein_id=Rv3878 ### -Chromosome ena gene 4357593 4359782 . - . ID=gene:Rv3879c;Name=espK;biotype=protein_coding;description=ESX-1 secretion-associated protein EspK. Alanine and proline rich protein.;gene_id=Rv3879c;logic_name=ena +Chromosome ena gene 4357593 4359782 . - . ID=gene:Rv3879c;Name=espK;biotype=protein_coding;description=ESX-1 secretion-associated protein EspK. Alanine and proline rich protein.;gene_id=Rv3879c;logic_name=ena Chromosome ena mRNA 4357593 4359782 . - . ID=transcript:Rv3879c;Parent=gene:Rv3879c;Name=espK-1;biotype=protein_coding;transcript_id=Rv3879c Chromosome ena exon 4357593 4359782 . - . Parent=transcript:Rv3879c;Name=Rv3879c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3879c-1;rank=1 Chromosome ena CDS 4357593 4359782 . - 0 ID=CDS:Rv3879c;Parent=transcript:Rv3879c;protein_id=Rv3879c ### -Chromosome ena gene 4360199 4360546 . - . ID=gene:Rv3880c;Name=espL;biotype=protein_coding;description=ESX-1 secretion-associated protein EspL;gene_id=Rv3880c;logic_name=ena +Chromosome ena gene 4360199 4360546 . - . ID=gene:Rv3880c;Name=espL;biotype=protein_coding;description=ESX-1 secretion-associated protein EspL;gene_id=Rv3880c;logic_name=ena Chromosome ena mRNA 4360199 4360546 . - . ID=transcript:Rv3880c;Parent=gene:Rv3880c;Name=espL-1;biotype=protein_coding;transcript_id=Rv3880c Chromosome ena exon 4360199 4360546 . - . Parent=transcript:Rv3880c;Name=Rv3880c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3880c-1;rank=1 Chromosome ena CDS 4360199 4360546 . - 0 ID=CDS:Rv3880c;Parent=transcript:Rv3880c;protein_id=Rv3880c ### -Chromosome ena gene 4360543 4361925 . - . ID=gene:Rv3881c;Name=espB;biotype=protein_coding;description=Secreted ESX-1 substrate protein B%2C EspB. Conserved alanine and glycine rich protein;gene_id=Rv3881c;logic_name=ena +Chromosome ena gene 4360543 4361925 . - . ID=gene:Rv3881c;Name=espB;biotype=protein_coding;description=Secreted ESX-1 substrate protein B%2C EspB. Conserved alanine and glycine rich protein;gene_id=Rv3881c;logic_name=ena Chromosome ena mRNA 4360543 4361925 . - . ID=transcript:Rv3881c;Parent=gene:Rv3881c;Name=espB-1;biotype=protein_coding;transcript_id=Rv3881c Chromosome ena exon 4360543 4361925 . - . Parent=transcript:Rv3881c;Name=Rv3881c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3881c-1;rank=1 Chromosome ena CDS 4360543 4361925 . - 0 ID=CDS:Rv3881c;Parent=transcript:Rv3881c;protein_id=Rv3881c ### -Chromosome ena gene 4362032 4363420 . - . ID=gene:Rv3882c;Name=eccE1;biotype=protein_coding;description=ESX conserved component EccE1. ESX-1 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3882c;logic_name=ena +Chromosome ena gene 4362032 4363420 . - . ID=gene:Rv3882c;Name=eccE1;biotype=protein_coding;description=ESX conserved component EccE1. ESX-1 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3882c;logic_name=ena Chromosome ena mRNA 4362032 4363420 . - . ID=transcript:Rv3882c;Parent=gene:Rv3882c;Name=eccE1-1;biotype=protein_coding;transcript_id=Rv3882c Chromosome ena exon 4362032 4363420 . - . Parent=transcript:Rv3882c;Name=Rv3882c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3882c-1;rank=1 Chromosome ena CDS 4362032 4363420 . - 0 ID=CDS:Rv3882c;Parent=transcript:Rv3882c;protein_id=Rv3882c ### -Chromosome ena gene 4363417 4364757 . - . ID=gene:Rv3883c;Name=mycP1;biotype=protein_coding;description=Membrane-anchored mycosin MycP1 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-1);gene_id=Rv3883c;logic_name=ena +Chromosome ena gene 4363417 4364757 . - . ID=gene:Rv3883c;Name=mycP1;biotype=protein_coding;description=Membrane-anchored mycosin MycP1 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-1);gene_id=Rv3883c;logic_name=ena Chromosome ena mRNA 4363417 4364757 . - . ID=transcript:Rv3883c;Parent=gene:Rv3883c;Name=mycP1-1;biotype=protein_coding;transcript_id=Rv3883c Chromosome ena exon 4363417 4364757 . - . Parent=transcript:Rv3883c;Name=Rv3883c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3883c-1;rank=1 Chromosome ena CDS 4363417 4364757 . - 0 ID=CDS:Rv3883c;Parent=transcript:Rv3883c;protein_id=Rv3883c ### -Chromosome ena gene 4364979 4366838 . - . ID=gene:Rv3884c;Name=eccA2;biotype=protein_coding;description=ESX conserved component EccA2. ESX-2 type VII secretion system protein. Probable CbxX/CfqX family protein.;gene_id=Rv3884c;logic_name=ena +Chromosome ena gene 4364979 4366838 . - . ID=gene:Rv3884c;Name=eccA2;biotype=protein_coding;description=ESX conserved component EccA2. ESX-2 type VII secretion system protein. Probable CbxX/CfqX family protein.;gene_id=Rv3884c;logic_name=ena Chromosome ena mRNA 4364979 4366838 . - . ID=transcript:Rv3884c;Parent=gene:Rv3884c;Name=eccA2-1;biotype=protein_coding;transcript_id=Rv3884c Chromosome ena exon 4364979 4366838 . - . Parent=transcript:Rv3884c;Name=Rv3884c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3884c-1;rank=1 Chromosome ena CDS 4364979 4366838 . - 0 ID=CDS:Rv3884c;Parent=transcript:Rv3884c;protein_id=Rv3884c ### -Chromosome ena gene 4366908 4368521 . - . ID=gene:Rv3885c;Name=eccE2;biotype=protein_coding;description=ESX conserved component EccE2. ESX-2 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3885c;logic_name=ena +Chromosome ena gene 4366908 4368521 . - . ID=gene:Rv3885c;Name=eccE2;biotype=protein_coding;description=ESX conserved component EccE2. ESX-2 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3885c;logic_name=ena Chromosome ena mRNA 4366908 4368521 . - . ID=transcript:Rv3885c;Parent=gene:Rv3885c;Name=eccE2-1;biotype=protein_coding;transcript_id=Rv3885c Chromosome ena exon 4366908 4368521 . - . Parent=transcript:Rv3885c;Name=Rv3885c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3885c-1;rank=1 Chromosome ena CDS 4366908 4368521 . - 0 ID=CDS:Rv3885c;Parent=transcript:Rv3885c;protein_id=Rv3885c ### -Chromosome ena gene 4368518 4370170 . - . ID=gene:Rv3886c;Name=mycP2;biotype=protein_coding;description=Probable alanine and proline rich membrane-anchored mycosin MycP2 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-2);gene_id=Rv3886c;logic_name=ena +Chromosome ena gene 4368518 4370170 . - . ID=gene:Rv3886c;Name=mycP2;biotype=protein_coding;description=Probable alanine and proline rich membrane-anchored mycosin MycP2 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-2);gene_id=Rv3886c;logic_name=ena Chromosome ena mRNA 4368518 4370170 . - . ID=transcript:Rv3886c;Parent=gene:Rv3886c;Name=mycP2-1;biotype=protein_coding;transcript_id=Rv3886c Chromosome ena exon 4368518 4370170 . - . Parent=transcript:Rv3886c;Name=Rv3886c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3886c-1;rank=1 Chromosome ena CDS 4368518 4370170 . - 0 ID=CDS:Rv3886c;Parent=transcript:Rv3886c;protein_id=Rv3886c ### -Chromosome ena gene 4370155 4371684 . - . ID=gene:Rv3887c;Name=eccD2;biotype=protein_coding;description=ESX conserved component EccD2. ESX-2 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv3887c;logic_name=ena +Chromosome ena gene 4370155 4371684 . - . ID=gene:Rv3887c;Name=eccD2;biotype=protein_coding;description=ESX conserved component EccD2. ESX-2 type VII secretion system protein. Probable transmembrane protein.;gene_id=Rv3887c;logic_name=ena Chromosome ena mRNA 4370155 4371684 . - . ID=transcript:Rv3887c;Parent=gene:Rv3887c;Name=eccD2-1;biotype=protein_coding;transcript_id=Rv3887c Chromosome ena exon 4370155 4371684 . - . Parent=transcript:Rv3887c;Name=Rv3887c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3887c-1;rank=1 Chromosome ena CDS 4370155 4371684 . - 0 ID=CDS:Rv3887c;Parent=transcript:Rv3887c;protein_id=Rv3887c ### -Chromosome ena gene 4371681 4372706 . - . ID=gene:Rv3888c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3888c;logic_name=ena +Chromosome ena gene 4371681 4372706 . - . ID=gene:Rv3888c;biotype=protein_coding;description=Probable conserved membrane protein;gene_id=Rv3888c;logic_name=ena Chromosome ena mRNA 4371681 4372706 . - . ID=transcript:Rv3888c;Parent=gene:Rv3888c;biotype=protein_coding;transcript_id=Rv3888c Chromosome ena exon 4371681 4372706 . - . Parent=transcript:Rv3888c;Name=Rv3888c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3888c-1;rank=1 Chromosome ena CDS 4371681 4372706 . - 0 ID=CDS:Rv3888c;Parent=transcript:Rv3888c;protein_id=Rv3888c ### -Chromosome ena gene 4372800 4373630 . - . ID=gene:Rv3889c;Name=espG2;biotype=protein_coding;description=ESX-2 secretion-associated protein EspG2;gene_id=Rv3889c;logic_name=ena +Chromosome ena gene 4372800 4373630 . - . ID=gene:Rv3889c;Name=espG2;biotype=protein_coding;description=ESX-2 secretion-associated protein EspG2;gene_id=Rv3889c;logic_name=ena Chromosome ena mRNA 4372800 4373630 . - . ID=transcript:Rv3889c;Parent=gene:Rv3889c;Name=espG2-1;biotype=protein_coding;transcript_id=Rv3889c Chromosome ena exon 4372800 4373630 . - . Parent=transcript:Rv3889c;Name=Rv3889c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3889c-1;rank=1 Chromosome ena CDS 4372800 4373630 . - 0 ID=CDS:Rv3889c;Parent=transcript:Rv3889c;protein_id=Rv3889c ### -Chromosome ena gene 4373726 4374013 . - . ID=gene:Rv3890c;Name=esxC;biotype=protein_coding;description=ESAT-6 like protein EsxC (ESAT-6 like protein 11);gene_id=Rv3890c;logic_name=ena +Chromosome ena gene 4373726 4374013 . - . ID=gene:Rv3890c;Name=esxC;biotype=protein_coding;description=ESAT-6 like protein EsxC (ESAT-6 like protein 11);gene_id=Rv3890c;logic_name=ena Chromosome ena mRNA 4373726 4374013 . - . ID=transcript:Rv3890c;Parent=gene:Rv3890c;Name=esxC-1;biotype=protein_coding;transcript_id=Rv3890c Chromosome ena exon 4373726 4374013 . - . Parent=transcript:Rv3890c;Name=Rv3890c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3890c-1;rank=1 Chromosome ena CDS 4373726 4374013 . - 0 ID=CDS:Rv3890c;Parent=transcript:Rv3890c;protein_id=Rv3890c ### -Chromosome ena gene 4374049 4374372 . - . ID=gene:Rv3891c;Name=esxD;biotype=protein_coding;description=Possible ESAT-6 like protein EsxD;gene_id=Rv3891c;logic_name=ena +Chromosome ena gene 4374049 4374372 . - . ID=gene:Rv3891c;Name=esxD;biotype=protein_coding;description=Possible ESAT-6 like protein EsxD;gene_id=Rv3891c;logic_name=ena Chromosome ena mRNA 4374049 4374372 . - . ID=transcript:Rv3891c;Parent=gene:Rv3891c;Name=esxD-1;biotype=protein_coding;transcript_id=Rv3891c Chromosome ena exon 4374049 4374372 . - . Parent=transcript:Rv3891c;Name=Rv3891c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3891c-1;rank=1 Chromosome ena CDS 4374049 4374372 . - 0 ID=CDS:Rv3891c;Parent=transcript:Rv3891c;protein_id=Rv3891c ### -Chromosome ena gene 4374484 4375683 . - . ID=gene:Rv3892c;Name=PPE69;biotype=protein_coding;description=PPE family protein PPE69;gene_id=Rv3892c;logic_name=ena +Chromosome ena gene 4374484 4375683 . - . ID=gene:Rv3892c;Name=PPE69;biotype=protein_coding;description=PPE family protein PPE69;gene_id=Rv3892c;logic_name=ena Chromosome ena mRNA 4374484 4375683 . - . ID=transcript:Rv3892c;Parent=gene:Rv3892c;Name=PPE69-1;biotype=protein_coding;transcript_id=Rv3892c Chromosome ena exon 4374484 4375683 . - . Parent=transcript:Rv3892c;Name=Rv3892c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3892c-1;rank=1 Chromosome ena CDS 4374484 4375683 . - 0 ID=CDS:Rv3892c;Parent=transcript:Rv3892c;protein_id=Rv3892c ### -Chromosome ena gene 4375762 4375995 . - . ID=gene:Rv3893c;Name=PE36;biotype=protein_coding;description=PE family protein PE36;gene_id=Rv3893c;logic_name=ena +Chromosome ena gene 4375762 4375995 . - . ID=gene:Rv3893c;Name=PE36;biotype=protein_coding;description=PE family protein PE36;gene_id=Rv3893c;logic_name=ena Chromosome ena mRNA 4375762 4375995 . - . ID=transcript:Rv3893c;Parent=gene:Rv3893c;Name=PE36-1;biotype=protein_coding;transcript_id=Rv3893c Chromosome ena exon 4375762 4375995 . - . Parent=transcript:Rv3893c;Name=Rv3893c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3893c-1;rank=1 Chromosome ena CDS 4375762 4375995 . - 0 ID=CDS:Rv3893c;Parent=transcript:Rv3893c;protein_id=Rv3893c ### -Chromosome ena gene 4376262 4380452 . - . ID=gene:Rv3894c;Name=eccC2;biotype=protein_coding;description=ESX conserved component EccC2. ESX-2 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3894c;logic_name=ena +Chromosome ena gene 4376262 4380452 . - . ID=gene:Rv3894c;Name=eccC2;biotype=protein_coding;description=ESX conserved component EccC2. ESX-2 type VII secretion system protein. Possible membrane protein.;gene_id=Rv3894c;logic_name=ena Chromosome ena mRNA 4376262 4380452 . - . ID=transcript:Rv3894c;Parent=gene:Rv3894c;Name=eccC2-1;biotype=protein_coding;transcript_id=Rv3894c Chromosome ena exon 4376262 4380452 . - . Parent=transcript:Rv3894c;Name=Rv3894c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3894c-1;rank=1 Chromosome ena CDS 4376262 4380452 . - 0 ID=CDS:Rv3894c;Parent=transcript:Rv3894c;protein_id=Rv3894c ### -Chromosome ena gene 4380453 4381940 . - . ID=gene:Rv3895c;Name=eccB2;biotype=protein_coding;description=ESX conserved component EccB2. ESX-2 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3895c;logic_name=ena +Chromosome ena gene 4380453 4381940 . - . ID=gene:Rv3895c;Name=eccB2;biotype=protein_coding;description=ESX conserved component EccB2. ESX-2 type VII secretion system protein. Probable membrane protein.;gene_id=Rv3895c;logic_name=ena Chromosome ena mRNA 4380453 4381940 . - . ID=transcript:Rv3895c;Parent=gene:Rv3895c;Name=eccB2-1;biotype=protein_coding;transcript_id=Rv3895c Chromosome ena exon 4380453 4381940 . - . Parent=transcript:Rv3895c;Name=Rv3895c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3895c-1;rank=1 Chromosome ena CDS 4380453 4381940 . - 0 ID=CDS:Rv3895c;Parent=transcript:Rv3895c;protein_id=Rv3895c ### -Chromosome ena gene 4381943 4382851 . - . ID=gene:Rv3896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3896c;logic_name=ena +Chromosome ena gene 4381943 4382851 . - . ID=gene:Rv3896c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3896c;logic_name=ena Chromosome ena mRNA 4381943 4382851 . - . ID=transcript:Rv3896c;Parent=gene:Rv3896c;biotype=protein_coding;transcript_id=Rv3896c Chromosome ena exon 4381943 4382851 . - . Parent=transcript:Rv3896c;Name=Rv3896c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3896c-1;rank=1 Chromosome ena CDS 4381943 4382851 . - 0 ID=CDS:Rv3896c;Parent=transcript:Rv3896c;protein_id=Rv3896c ### -Chromosome ena gene 4383008 4383640 . - . ID=gene:Rv3897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3897c;logic_name=ena +Chromosome ena gene 4383008 4383640 . - . ID=gene:Rv3897c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3897c;logic_name=ena Chromosome ena mRNA 4383008 4383640 . - . ID=transcript:Rv3897c;Parent=gene:Rv3897c;biotype=protein_coding;transcript_id=Rv3897c Chromosome ena exon 4383008 4383640 . - . Parent=transcript:Rv3897c;Name=Rv3897c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3897c-1;rank=1 Chromosome ena CDS 4383008 4383640 . - 0 ID=CDS:Rv3897c;Parent=transcript:Rv3897c;protein_id=Rv3897c ### -Chromosome ena gene 4383653 4383985 . - . ID=gene:Rv3898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3898c;logic_name=ena +Chromosome ena gene 4383653 4383985 . - . ID=gene:Rv3898c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3898c;logic_name=ena Chromosome ena mRNA 4383653 4383985 . - . ID=transcript:Rv3898c;Parent=gene:Rv3898c;biotype=protein_coding;transcript_id=Rv3898c Chromosome ena exon 4383653 4383985 . - . Parent=transcript:Rv3898c;Name=Rv3898c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3898c-1;rank=1 Chromosome ena CDS 4383653 4383985 . - 0 ID=CDS:Rv3898c;Parent=transcript:Rv3898c;protein_id=Rv3898c ### -Chromosome ena gene 4384147 4385379 . - . ID=gene:Rv3899c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3899c;logic_name=ena +Chromosome ena gene 4384147 4385379 . - . ID=gene:Rv3899c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3899c;logic_name=ena Chromosome ena mRNA 4384147 4385379 . - . ID=transcript:Rv3899c;Parent=gene:Rv3899c;biotype=protein_coding;transcript_id=Rv3899c Chromosome ena exon 4384147 4385379 . - . Parent=transcript:Rv3899c;Name=Rv3899c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3899c-1;rank=1 Chromosome ena CDS 4384147 4385379 . - 0 ID=CDS:Rv3899c;Parent=transcript:Rv3899c;protein_id=Rv3899c ### -Chromosome ena gene 4385373 4386308 . - . ID=gene:Rv3900c;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv3900c;logic_name=ena +Chromosome ena gene 4385373 4386308 . - . ID=gene:Rv3900c;biotype=protein_coding;description=Conserved hypothetical alanine rich protein;gene_id=Rv3900c;logic_name=ena Chromosome ena mRNA 4385373 4386308 . - . ID=transcript:Rv3900c;Parent=gene:Rv3900c;biotype=protein_coding;transcript_id=Rv3900c Chromosome ena exon 4385373 4386308 . - . Parent=transcript:Rv3900c;Name=Rv3900c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3900c-1;rank=1 Chromosome ena CDS 4385373 4386308 . - 0 ID=CDS:Rv3900c;Parent=transcript:Rv3900c;protein_id=Rv3900c ### -Chromosome ena gene 4386365 4386814 . - . ID=gene:Rv3901c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3901c;logic_name=ena +Chromosome ena gene 4386365 4386814 . - . ID=gene:Rv3901c;biotype=protein_coding;description=Possible membrane protein;gene_id=Rv3901c;logic_name=ena Chromosome ena mRNA 4386365 4386814 . - . ID=transcript:Rv3901c;Parent=gene:Rv3901c;biotype=protein_coding;transcript_id=Rv3901c Chromosome ena exon 4386365 4386814 . - . Parent=transcript:Rv3901c;Name=Rv3901c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3901c-1;rank=1 Chromosome ena CDS 4386365 4386814 . - 0 ID=CDS:Rv3901c;Parent=transcript:Rv3901c;protein_id=Rv3901c ### -Chromosome ena gene 4387365 4387895 . - . ID=gene:Rv3902c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3902c;logic_name=ena +Chromosome ena gene 4387365 4387895 . - . ID=gene:Rv3902c;biotype=protein_coding;description=Hypothetical protein;gene_id=Rv3902c;logic_name=ena Chromosome ena mRNA 4387365 4387895 . - . ID=transcript:Rv3902c;Parent=gene:Rv3902c;biotype=protein_coding;transcript_id=Rv3902c Chromosome ena exon 4387365 4387895 . - . Parent=transcript:Rv3902c;Name=Rv3902c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3902c-1;rank=1 Chromosome ena CDS 4387365 4387895 . - 0 ID=CDS:Rv3902c;Parent=transcript:Rv3902c;protein_id=Rv3902c ### -Chromosome ena gene 4387892 4390432 . - . ID=gene:Rv3903c;biotype=protein_coding;description=Hypothetical alanine and proline rich protein;gene_id=Rv3903c;logic_name=ena +Chromosome ena gene 4387892 4390432 . - . ID=gene:Rv3903c;biotype=protein_coding;description=Hypothetical alanine and proline rich protein;gene_id=Rv3903c;logic_name=ena Chromosome ena mRNA 4387892 4390432 . - . ID=transcript:Rv3903c;Parent=gene:Rv3903c;biotype=protein_coding;transcript_id=Rv3903c Chromosome ena exon 4387892 4390432 . - . Parent=transcript:Rv3903c;Name=Rv3903c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3903c-1;rank=1 Chromosome ena CDS 4387892 4390432 . - 0 ID=CDS:Rv3903c;Parent=transcript:Rv3903c;protein_id=Rv3903c ### -Chromosome ena gene 4390437 4390709 . - . ID=gene:Rv3904c;Name=esxE;biotype=protein_coding;description=Putative ESAT-6 like protein EsxE (hypothetical alanine rich protein) (ESAT-6 like protein 12);gene_id=Rv3904c;logic_name=ena +Chromosome ena gene 4390437 4390709 . - . ID=gene:Rv3904c;Name=esxE;biotype=protein_coding;description=Putative ESAT-6 like protein EsxE (hypothetical alanine rich protein) (ESAT-6 like protein 12);gene_id=Rv3904c;logic_name=ena Chromosome ena mRNA 4390437 4390709 . - . ID=transcript:Rv3904c;Parent=gene:Rv3904c;Name=esxE-1;biotype=protein_coding;transcript_id=Rv3904c Chromosome ena exon 4390437 4390709 . - . Parent=transcript:Rv3904c;Name=Rv3904c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3904c-1;rank=1 Chromosome ena CDS 4390437 4390709 . - 0 ID=CDS:Rv3904c;Parent=transcript:Rv3904c;protein_id=Rv3904c ### -Chromosome ena gene 4390720 4391031 . - . ID=gene:Rv3905c;Name=esxF;biotype=protein_coding;description=Putative ESAT-6 like protein EsxF (hypothetical alanine and glycine rich protein) (ESAT-6 like protein 13);gene_id=Rv3905c;logic_name=ena +Chromosome ena gene 4390720 4391031 . - . ID=gene:Rv3905c;Name=esxF;biotype=protein_coding;description=Putative ESAT-6 like protein EsxF (hypothetical alanine and glycine rich protein) (ESAT-6 like protein 13);gene_id=Rv3905c;logic_name=ena Chromosome ena mRNA 4390720 4391031 . - . ID=transcript:Rv3905c;Parent=gene:Rv3905c;Name=esxF-1;biotype=protein_coding;transcript_id=Rv3905c Chromosome ena exon 4390720 4391031 . - . Parent=transcript:Rv3905c;Name=Rv3905c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3905c-1;rank=1 Chromosome ena CDS 4390720 4391031 . - 0 ID=CDS:Rv3905c;Parent=transcript:Rv3905c;protein_id=Rv3905c ### -Chromosome ena gene 4391097 4391606 . - . ID=gene:Rv3906c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3906c;logic_name=ena +Chromosome ena gene 4391097 4391606 . - . ID=gene:Rv3906c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3906c;logic_name=ena Chromosome ena mRNA 4391097 4391606 . - . ID=transcript:Rv3906c;Parent=gene:Rv3906c;biotype=protein_coding;transcript_id=Rv3906c Chromosome ena exon 4391097 4391606 . - . Parent=transcript:Rv3906c;Name=Rv3906c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3906c-1;rank=1 Chromosome ena CDS 4391097 4391606 . - 0 ID=CDS:Rv3906c;Parent=transcript:Rv3906c;protein_id=Rv3906c ### -Chromosome ena gene 4391631 4393073 . - . ID=gene:Rv3907c;Name=pcnA;biotype=protein_coding;description=Probable poly(A) polymerase PcnA (polynucleotide adenylyltransferase) (NTP polymerase) (RNA adenylating enzyme) (poly(A) polymerase);gene_id=Rv3907c;logic_name=ena +Chromosome ena gene 4391631 4393073 . - . ID=gene:Rv3907c;Name=pcnA;biotype=protein_coding;description=Probable poly(A) polymerase PcnA (polynucleotide adenylyltransferase) (NTP polymerase) (RNA adenylating enzyme) (poly(A) polymerase);gene_id=Rv3907c;logic_name=ena Chromosome ena mRNA 4391631 4393073 . - . ID=transcript:Rv3907c;Parent=gene:Rv3907c;Name=pcnA-1;biotype=protein_coding;transcript_id=Rv3907c Chromosome ena exon 4391631 4393073 . - . Parent=transcript:Rv3907c;Name=Rv3907c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3907c-1;rank=1 Chromosome ena CDS 4391631 4393073 . - 0 ID=CDS:Rv3907c;Parent=transcript:Rv3907c;protein_id=Rv3907c ### -Chromosome ena gene 4393449 4394195 . + . ID=gene:Rv3908;Name=mutT4;biotype=protein_coding;description=Possible mutator protein MutT4;gene_id=Rv3908;logic_name=ena +Chromosome ena gene 4393449 4394195 . + . ID=gene:Rv3908;Name=mutT4;biotype=protein_coding;description=Possible mutator protein MutT4;gene_id=Rv3908;logic_name=ena Chromosome ena mRNA 4393449 4394195 . + . ID=transcript:Rv3908;Parent=gene:Rv3908;Name=mutT4-1;biotype=protein_coding;transcript_id=Rv3908 Chromosome ena exon 4393449 4394195 . + . Parent=transcript:Rv3908;Name=Rv3908-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3908-1;rank=1 Chromosome ena CDS 4393449 4394195 . + 0 ID=CDS:Rv3908;Parent=transcript:Rv3908;protein_id=Rv3908 ### -Chromosome ena gene 4394192 4396600 . + . ID=gene:Rv3909;biotype=protein_coding;description=Conserved protein;gene_id=Rv3909;logic_name=ena +Chromosome ena gene 4394192 4396600 . + . ID=gene:Rv3909;biotype=protein_coding;description=Conserved protein;gene_id=Rv3909;logic_name=ena Chromosome ena mRNA 4394192 4396600 . + . ID=transcript:Rv3909;Parent=gene:Rv3909;biotype=protein_coding;transcript_id=Rv3909 Chromosome ena exon 4394192 4396600 . + . Parent=transcript:Rv3909;Name=Rv3909-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3909-1;rank=1 Chromosome ena CDS 4394192 4396600 . + 0 ID=CDS:Rv3909;Parent=transcript:Rv3909;protein_id=Rv3909 ### -Chromosome ena gene 4396597 4400151 . + . ID=gene:Rv3910;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3910;logic_name=ena +Chromosome ena gene 4396597 4400151 . + . ID=gene:Rv3910;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3910;logic_name=ena Chromosome ena mRNA 4396597 4400151 . + . ID=transcript:Rv3910;Parent=gene:Rv3910;biotype=protein_coding;transcript_id=Rv3910 Chromosome ena exon 4396597 4400151 . + . Parent=transcript:Rv3910;Name=Rv3910-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3910-1;rank=1 Chromosome ena CDS 4396597 4400151 . + 0 ID=CDS:Rv3910;Parent=transcript:Rv3910;protein_id=Rv3910 ### -Chromosome ena gene 4400186 4400854 . + . ID=gene:Rv3911;Name=sigM;biotype=protein_coding;description=Possible alternative RNA polymerase sigma factor SigM;gene_id=Rv3911;logic_name=ena +Chromosome ena gene 4400186 4400854 . + . ID=gene:Rv3911;Name=sigM;biotype=protein_coding;description=Possible alternative RNA polymerase sigma factor SigM;gene_id=Rv3911;logic_name=ena Chromosome ena mRNA 4400186 4400854 . + . ID=transcript:Rv3911;Parent=gene:Rv3911;Name=sigM-1;biotype=protein_coding;transcript_id=Rv3911 Chromosome ena exon 4400186 4400854 . + . Parent=transcript:Rv3911;Name=Rv3911-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3911-1;rank=1 Chromosome ena CDS 4400186 4400854 . + 0 ID=CDS:Rv3911;Parent=transcript:Rv3911;protein_id=Rv3911 ### -Chromosome ena gene 4400870 4401634 . + . ID=gene:Rv3912;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv3912;logic_name=ena +Chromosome ena gene 4400870 4401634 . + . ID=gene:Rv3912;biotype=protein_coding;description=Hypothetical alanine rich protein;gene_id=Rv3912;logic_name=ena Chromosome ena mRNA 4400870 4401634 . + . ID=transcript:Rv3912;Parent=gene:Rv3912;biotype=protein_coding;transcript_id=Rv3912 Chromosome ena exon 4400870 4401634 . + . Parent=transcript:Rv3912;Name=Rv3912-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3912-1;rank=1 Chromosome ena CDS 4400870 4401634 . + 0 ID=CDS:Rv3912;Parent=transcript:Rv3912;protein_id=Rv3912 ### -Chromosome ena gene 4401728 4402735 . + . ID=gene:Rv3913;Name=trxB2;biotype=protein_coding;description=Probable thioredoxin reductase TrxB2 (TRXR) (TR);gene_id=Rv3913;logic_name=ena +Chromosome ena gene 4401728 4402735 . + . ID=gene:Rv3913;Name=trxB2;biotype=protein_coding;description=Probable thioredoxin reductase TrxB2 (TRXR) (TR);gene_id=Rv3913;logic_name=ena Chromosome ena mRNA 4401728 4402735 . + . ID=transcript:Rv3913;Parent=gene:Rv3913;Name=trxB2-1;biotype=protein_coding;transcript_id=Rv3913 Chromosome ena exon 4401728 4402735 . + . Parent=transcript:Rv3913;Name=Rv3913-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3913-1;rank=1 Chromosome ena CDS 4401728 4402735 . + 0 ID=CDS:Rv3913;Parent=transcript:Rv3913;protein_id=Rv3913 ### -Chromosome ena gene 4402732 4403082 . + . ID=gene:Rv3914;Name=trxC;biotype=protein_coding;description=Thioredoxin TrxC (TRX) (MPT46);gene_id=Rv3914;logic_name=ena +Chromosome ena gene 4402732 4403082 . + . ID=gene:Rv3914;Name=trxC;biotype=protein_coding;description=Thioredoxin TrxC (TRX) (MPT46);gene_id=Rv3914;logic_name=ena Chromosome ena mRNA 4402732 4403082 . + . ID=transcript:Rv3914;Parent=gene:Rv3914;Name=trxC-1;biotype=protein_coding;transcript_id=Rv3914 Chromosome ena exon 4402732 4403082 . + . Parent=transcript:Rv3914;Name=Rv3914-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3914-1;rank=1 Chromosome ena CDS 4402732 4403082 . + 0 ID=CDS:Rv3914;Parent=transcript:Rv3914;protein_id=Rv3914 ### -Chromosome ena gene 4403192 4404412 . + . ID=gene:Rv3915;biotype=protein_coding;description=Probable peptidoglycan hydrolase;gene_id=Rv3915;logic_name=ena +Chromosome ena gene 4403192 4404412 . + . ID=gene:Rv3915;biotype=protein_coding;description=Probable peptidoglycan hydrolase;gene_id=Rv3915;logic_name=ena Chromosome ena mRNA 4403192 4404412 . + . ID=transcript:Rv3915;Parent=gene:Rv3915;biotype=protein_coding;transcript_id=Rv3915 Chromosome ena exon 4403192 4404412 . + . Parent=transcript:Rv3915;Name=Rv3915-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3915-1;rank=1 Chromosome ena CDS 4403192 4404412 . + 0 ID=CDS:Rv3915;Parent=transcript:Rv3915;protein_id=Rv3915 ### -Chromosome ena gene 4404433 4405167 . - . ID=gene:Rv3916c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3916c;logic_name=ena +Chromosome ena gene 4404433 4405167 . - . ID=gene:Rv3916c;biotype=protein_coding;description=Conserved hypothetical protein;gene_id=Rv3916c;logic_name=ena Chromosome ena mRNA 4404433 4405167 . - . ID=transcript:Rv3916c;Parent=gene:Rv3916c;biotype=protein_coding;transcript_id=Rv3916c Chromosome ena exon 4404433 4405167 . - . Parent=transcript:Rv3916c;Name=Rv3916c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3916c-1;rank=1 Chromosome ena CDS 4404433 4405167 . - 0 ID=CDS:Rv3916c;Parent=transcript:Rv3916c;protein_id=Rv3916c ### -Chromosome ena gene 4405457 4406491 . - . ID=gene:Rv3917c;Name=parB;biotype=protein_coding;description=Probable chromosome partitioning protein ParB;gene_id=Rv3917c;logic_name=ena +Chromosome ena gene 4405457 4406491 . - . ID=gene:Rv3917c;Name=parB;biotype=protein_coding;description=Probable chromosome partitioning protein ParB;gene_id=Rv3917c;logic_name=ena Chromosome ena mRNA 4405457 4406491 . - . ID=transcript:Rv3917c;Parent=gene:Rv3917c;Name=parB-1;biotype=protein_coding;transcript_id=Rv3917c Chromosome ena exon 4405457 4406491 . - . Parent=transcript:Rv3917c;Name=Rv3917c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3917c-1;rank=1 Chromosome ena CDS 4405457 4406491 . - 0 ID=CDS:Rv3917c;Parent=transcript:Rv3917c;protein_id=Rv3917c ### -Chromosome ena gene 4406488 4407531 . - . ID=gene:Rv3918c;Name=parA;biotype=protein_coding;description=Probable chromosome partitioning protein ParA;gene_id=Rv3918c;logic_name=ena +Chromosome ena gene 4406488 4407531 . - . ID=gene:Rv3918c;Name=parA;biotype=protein_coding;description=Probable chromosome partitioning protein ParA;gene_id=Rv3918c;logic_name=ena Chromosome ena mRNA 4406488 4407531 . - . ID=transcript:Rv3918c;Parent=gene:Rv3918c;Name=parA-1;biotype=protein_coding;transcript_id=Rv3918c Chromosome ena exon 4406488 4407531 . - . Parent=transcript:Rv3918c;Name=Rv3918c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3918c-1;rank=1 Chromosome ena CDS 4406488 4407531 . - 0 ID=CDS:Rv3918c;Parent=transcript:Rv3918c;protein_id=Rv3918c ### -Chromosome ena gene 4407528 4408202 . - . ID=gene:Rv3919c;Name=gid;biotype=protein_coding;description=Probable glucose-inhibited division protein B Gid;gene_id=Rv3919c;logic_name=ena +Chromosome ena gene 4407528 4408202 . - . ID=gene:Rv3919c;Name=gid;biotype=protein_coding;description=Probable glucose-inhibited division protein B Gid;gene_id=Rv3919c;logic_name=ena Chromosome ena mRNA 4407528 4408202 . - . ID=transcript:Rv3919c;Parent=gene:Rv3919c;Name=gid-1;biotype=protein_coding;transcript_id=Rv3919c Chromosome ena exon 4407528 4408202 . - . Parent=transcript:Rv3919c;Name=Rv3919c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3919c-1;rank=1 Chromosome ena CDS 4407528 4408202 . - 0 ID=CDS:Rv3919c;Parent=transcript:Rv3919c;protein_id=Rv3919c ### -Chromosome ena gene 4408334 4408897 . - . ID=gene:Rv3920c;biotype=protein_coding;description=Conserved protein similar to jag protein;gene_id=Rv3920c;logic_name=ena +Chromosome ena gene 4408334 4408897 . - . ID=gene:Rv3920c;biotype=protein_coding;description=Conserved protein similar to jag protein;gene_id=Rv3920c;logic_name=ena Chromosome ena mRNA 4408334 4408897 . - . ID=transcript:Rv3920c;Parent=gene:Rv3920c;biotype=protein_coding;transcript_id=Rv3920c Chromosome ena exon 4408334 4408897 . - . Parent=transcript:Rv3920c;Name=Rv3920c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3920c-1;rank=1 Chromosome ena CDS 4408334 4408897 . - 0 ID=CDS:Rv3920c;Parent=transcript:Rv3920c;protein_id=Rv3920c ### -Chromosome ena gene 4408969 4410069 . - . ID=gene:Rv3921c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3921c;logic_name=ena +Chromosome ena gene 4408969 4410069 . - . ID=gene:Rv3921c;biotype=protein_coding;description=Probable conserved transmembrane protein;gene_id=Rv3921c;logic_name=ena Chromosome ena mRNA 4408969 4410069 . - . ID=transcript:Rv3921c;Parent=gene:Rv3921c;biotype=protein_coding;transcript_id=Rv3921c Chromosome ena exon 4408969 4410069 . - . Parent=transcript:Rv3921c;Name=Rv3921c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3921c-1;rank=1 Chromosome ena CDS 4408969 4410069 . - 0 ID=CDS:Rv3921c;Parent=transcript:Rv3921c;protein_id=Rv3921c ### -Chromosome ena gene 4410053 4410415 . - . ID=gene:Rv3922c;biotype=protein_coding;description=Possible hemolysin;gene_id=Rv3922c;logic_name=ena +Chromosome ena gene 4410053 4410415 . - . ID=gene:Rv3922c;biotype=protein_coding;description=Possible hemolysin;gene_id=Rv3922c;logic_name=ena Chromosome ena mRNA 4410053 4410415 . - . ID=transcript:Rv3922c;Parent=gene:Rv3922c;biotype=protein_coding;transcript_id=Rv3922c Chromosome ena exon 4410053 4410415 . - . Parent=transcript:Rv3922c;Name=Rv3922c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3922c-1;rank=1 Chromosome ena CDS 4410053 4410415 . - 0 ID=CDS:Rv3922c;Parent=transcript:Rv3922c;protein_id=Rv3922c ### -Chromosome ena gene 4410412 4410789 . - . ID=gene:Rv3923c;Name=rnpA;biotype=protein_coding;description=Ribonuclease P protein component RnpA (RNaseP protein) (RNase P protein) (protein C5);gene_id=Rv3923c;logic_name=ena +Chromosome ena gene 4410412 4410789 . - . ID=gene:Rv3923c;Name=rnpA;biotype=protein_coding;description=Ribonuclease P protein component RnpA (RNaseP protein) (RNase P protein) (protein C5);gene_id=Rv3923c;logic_name=ena Chromosome ena mRNA 4410412 4410789 . - . ID=transcript:Rv3923c;Parent=gene:Rv3923c;Name=rnpA-1;biotype=protein_coding;transcript_id=Rv3923c Chromosome ena exon 4410412 4410789 . - . Parent=transcript:Rv3923c;Name=Rv3923c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3923c-1;rank=1 Chromosome ena CDS 4410412 4410789 . - 0 ID=CDS:Rv3923c;Parent=transcript:Rv3923c;protein_id=Rv3923c ### -Chromosome ena gene 4410786 4410929 . - . ID=gene:Rv3924c;Name=rpmH;biotype=protein_coding;description=50S ribosomal protein L34 RpmH;gene_id=Rv3924c;logic_name=ena +Chromosome ena gene 4410786 4410929 . - . ID=gene:Rv3924c;Name=rpmH;biotype=protein_coding;description=50S ribosomal protein L34 RpmH;gene_id=Rv3924c;logic_name=ena Chromosome ena mRNA 4410786 4410929 . - . ID=transcript:Rv3924c;Parent=gene:Rv3924c;Name=rpmH-1;biotype=protein_coding;transcript_id=Rv3924c Chromosome ena exon 4410786 4410929 . - . Parent=transcript:Rv3924c;Name=Rv3924c-1;constitutive=1;ensembl_end_phase=0;ensembl_phase=0;exon_id=Rv3924c-1;rank=1 Chromosome ena CDS 4410786 4410929 . - 0 ID=CDS:Rv3924c;Parent=transcript:Rv3924c;protein_id=Rv3924c diff --git a/db/who-v2.mask.bed b/db/who-v2.mask.bed new file mode 100644 index 0000000..d93b7fe --- /dev/null +++ b/db/who-v2.mask.bed @@ -0,0 +1,2292 @@ +NC_000962.3 0 33 +NC_000962.3 60 61 +NC_000962.3 1589 1591 +NC_000962.3 1592 1595 +NC_000962.3 1597 1624 +NC_000962.3 1625 1626 +NC_000962.3 2416 2417 +NC_000962.3 2421 2422 +NC_000962.3 2426 2428 +NC_000962.3 2432 2433 +NC_000962.3 2436 2438 +NC_000962.3 2441 2442 +NC_000962.3 2444 2448 +NC_000962.3 2449 2456 +NC_000962.3 2466 2467 +NC_000962.3 17848 17849 +NC_000962.3 17851 17968 +NC_000962.3 21689 21690 +NC_000962.3 21694 21934 +NC_000962.3 21936 21937 +NC_000962.3 26747 26752 +NC_000962.3 28366 28368 +NC_000962.3 29482 29485 +NC_000962.3 32348 32356 +NC_000962.3 32361 32389 +NC_000962.3 36470 36477 +NC_000962.3 37374 37375 +NC_000962.3 49690 49693 +NC_000962.3 55533 55555 +NC_000962.3 55605 55606 +NC_000962.3 55615 55709 +NC_000962.3 68337 68338 +NC_000962.3 71330 71577 +NC_000962.3 71584 71587 +NC_000962.3 79526 79595 +NC_000962.3 79605 79608 +NC_000962.3 80473 80478 +NC_000962.3 80481 80503 +NC_000962.3 80746 80748 +NC_000962.3 80760 80761 +NC_000962.3 81846 81864 +NC_000962.3 82437 82440 +NC_000962.3 82986 83060 +NC_000962.3 83061 83062 +NC_000962.3 84830 84832 +NC_000962.3 86611 86701 +NC_000962.3 90131 90139 +NC_000962.3 91803 91813 +NC_000962.3 91832 91833 +NC_000962.3 99162 99174 +NC_000962.3 102100 102138 +NC_000962.3 102140 102150 +NC_000962.3 103743 103756 +NC_000962.3 103788 104164 +NC_000962.3 104317 104985 +NC_000962.3 104986 104987 +NC_000962.3 106207 106343 +NC_000962.3 125830 125834 +NC_000962.3 126259 126260 +NC_000962.3 126261 126264 +NC_000962.3 126266 126295 +NC_000962.3 131174 131176 +NC_000962.3 131870 132736 +NC_000962.3 132781 132791 +NC_000962.3 132794 132795 +NC_000962.3 137850 137855 +NC_000962.3 139556 139557 +NC_000962.3 149466 149469 +NC_000962.3 149470 149574 +NC_000962.3 149576 149578 +NC_000962.3 149591 149592 +NC_000962.3 149594 149641 +NC_000962.3 149826 150348 +NC_000962.3 150349 150357 +NC_000962.3 150358 150360 +NC_000962.3 150362 150363 +NC_000962.3 150375 150376 +NC_000962.3 150377 150378 +NC_000962.3 150380 150382 +NC_000962.3 150395 150396 +NC_000962.3 150397 150398 +NC_000962.3 150404 150405 +NC_000962.3 150406 150427 +NC_000962.3 150428 150429 +NC_000962.3 150431 150454 +NC_000962.3 150455 150457 +NC_000962.3 150511 150535 +NC_000962.3 150537 150557 +NC_000962.3 150563 150564 +NC_000962.3 150617 150620 +NC_000962.3 150693 150697 +NC_000962.3 150770 150777 +NC_000962.3 150783 150931 +NC_000962.3 162151 162156 +NC_000962.3 176534 176539 +NC_000962.3 177246 177247 +NC_000962.3 177250 177267 +NC_000962.3 177268 177270 +NC_000962.3 191391 191398 +NC_000962.3 192354 192355 +NC_000962.3 192359 192360 +NC_000962.3 192362 192363 +NC_000962.3 192367 192376 +NC_000962.3 192377 192420 +NC_000962.3 192428 192429 +NC_000962.3 194839 194895 +NC_000962.3 198957 198958 +NC_000962.3 198960 198984 +NC_000962.3 198985 198987 +NC_000962.3 202360 202361 +NC_000962.3 203887 203888 +NC_000962.3 203889 203897 +NC_000962.3 203898 203902 +NC_000962.3 203903 203905 +NC_000962.3 206492 206493 +NC_000962.3 206494 206495 +NC_000962.3 208316 208317 +NC_000962.3 209213 209214 +NC_000962.3 228683 228684 +NC_000962.3 228686 228758 +NC_000962.3 230576 230577 +NC_000962.3 234468 234469 +NC_000962.3 234474 234477 +NC_000962.3 234483 234484 +NC_000962.3 234487 234488 +NC_000962.3 234791 234817 +NC_000962.3 234851 234864 +NC_000962.3 243925 243928 +NC_000962.3 262019 262020 +NC_000962.3 271546 271656 +NC_000962.3 271658 271664 +NC_000962.3 279514 279533 +NC_000962.3 279535 279590 +NC_000962.3 287142 287143 +NC_000962.3 293628 293633 +NC_000962.3 293704 293709 +NC_000962.3 308255 308478 +NC_000962.3 308479 308480 +NC_000962.3 333635 333698 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4385744 +NC_000962.3 4400660 4400663 +NC_000962.3 4411494 4411532 diff --git a/db/who-v2.rules.txt b/db/who-v2.rules.txt new file mode 100644 index 0000000..ca49686 --- /dev/null +++ b/db/who-v2.rules.txt @@ -0,0 +1,2 @@ +Variant(gene_name=mmpL5,type=lof) inactivates_resistance Variant(gene_name=mmpR5) +Variant(gene_name=eis,type=lof) inactivates_resistance Variant(gene_name=eis) diff --git a/db/tbdb.spoligotype_list.csv b/db/who-v2.spoligotype_list.csv similarity index 100% rename from db/tbdb.spoligotype_list.csv rename to db/who-v2.spoligotype_list.csv diff --git a/db/tbdb.spoligotype_spacers.txt b/db/who-v2.spoligotype_spacers.txt similarity index 100% rename from db/tbdb.spoligotype_spacers.txt rename to db/who-v2.spoligotype_spacers.txt diff --git a/db/who-v2.variables.json b/db/who-v2.variables.json new file mode 100644 index 0000000..47d3190 --- /dev/null +++ b/db/who-v2.variables.json @@ -0,0 +1 @@ +{"snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "streptomycin", "fluoroquinolones", "moxifloxacin", "ofloxacin", "levofloxacin", "ciprofloxacin", "aminoglycosides", "amikacin", "capreomycin", "kanamycin", "cycloserine", "ethionamide", "clofazimine", "para-aminosalicylic_acid", "delamanid", "bedaquiline", "linezolid"], "min-tb-profiler-version": "4.4.0", "version": {"name": "whov2", "commit": "6aed5d9", "Author": "Jody Phelan ", "Date": "Tue Jan 30 14:21:48 2024 +0000"}, "amplicon": false, "files": {"ref": "whov2.fasta", "gff": "whov2.gff", "bed": "whov2.bed", "json_db": "whov2.dr.json", "variables": "whov2.variables.json", "spoligotype_spacers": "whov2.spoligotype_spacers.txt", "spoligotype_annotations": "whov2.spoligotype_list.csv", "bedmask": "whov2.mask.bed", "barcode": "whov2.barcode.bed", "rules": "whov2.rules.txt"}} \ No newline at end of file From 86ae6c6da62367b3760a3fa137a02ac8a41fa33e Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:09:21 +0000 Subject: [PATCH 21/53] update setup --- setup.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 09e18df..6e74659 100644 --- a/setup.py +++ b/setup.py @@ -1,4 +1,5 @@ import setuptools +from glob import glob version = [l.strip() for l in open("tbprofiler/__init__.py") if "version" in l][0].split('"')[1] @@ -14,5 +15,5 @@ 'tb-profiler', 'scripts/tb-profiler-tools' ], - data_files=[('share/tbprofiler',["db/default_template.docx","db/tbdb.mask.bed","db/tbdb.spoligotype_spacers.txt","db/tbdb.spoligotype_list.csv","db/tbdb.barcode.bed","db/tbdb.bed","db/tbdb.dr.json","db/tbdb.fasta","db/tbdb.gff","db/tbdb.version.json","db/tbdb.variables.json","example_data/tbprofiler.test.fq.gz"])] + data_files=[('share/tbprofiler',[glob("db/*")])], ) From 00d6274d343c80a0d5aeee411d211dbd0c49d91a Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:10:09 +0000 Subject: [PATCH 22/53] update setup --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 6e74659..fb346e2 100644 --- a/setup.py +++ b/setup.py @@ -15,5 +15,5 @@ 'tb-profiler', 'scripts/tb-profiler-tools' ], - data_files=[('share/tbprofiler',[glob("db/*")])], + data_files=[('share/tbprofiler',glob("db/*"))], ) From 81259983b50a982679631c7c8fc03e38f936392f Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:12:20 +0000 Subject: [PATCH 23/53] update default database --- db/who-v2.variables.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/db/who-v2.variables.json b/db/who-v2.variables.json index 47d3190..e0b276e 100644 --- a/db/who-v2.variables.json +++ b/db/who-v2.variables.json @@ -1 +1 @@ -{"snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "streptomycin", "fluoroquinolones", "moxifloxacin", "ofloxacin", "levofloxacin", "ciprofloxacin", "aminoglycosides", "amikacin", "capreomycin", "kanamycin", "cycloserine", "ethionamide", "clofazimine", "para-aminosalicylic_acid", "delamanid", "bedaquiline", "linezolid"], "min-tb-profiler-version": "4.4.0", "version": {"name": "whov2", "commit": "6aed5d9", "Author": "Jody Phelan ", "Date": "Tue Jan 30 14:21:48 2024 +0000"}, "amplicon": false, "files": {"ref": "whov2.fasta", "gff": "whov2.gff", "bed": "whov2.bed", "json_db": "whov2.dr.json", "variables": "whov2.variables.json", "spoligotype_spacers": "whov2.spoligotype_spacers.txt", "spoligotype_annotations": "whov2.spoligotype_list.csv", "bedmask": "whov2.mask.bed", "barcode": "whov2.barcode.bed", "rules": "whov2.rules.txt"}} \ No newline at end of file +{"snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "streptomycin", "fluoroquinolones", "moxifloxacin", "ofloxacin", "levofloxacin", "ciprofloxacin", "aminoglycosides", "amikacin", "capreomycin", "kanamycin", "cycloserine", "ethionamide", "clofazimine", "para-aminosalicylic_acid", "delamanid", "bedaquiline", "linezolid"], "min-tb-profiler-version": "4.4.0", "version": {"name": "who-v2", "commit": "6aed5d9", "Author": "Jody Phelan ", "Date": "Tue Jan 30 14:21:48 2024 +0000"}, "amplicon": false, "files": {"ref": "who-v2.fasta", "gff": "who-v2.gff", "bed": "who-v2.bed", "json_db": "who-v2.dr.json", "variables": "who-v2.variables.json", "spoligotype_spacers": "who-v2.spoligotype_spacers.txt", "spoligotype_annotations": "who-v2.spoligotype_list.csv", "bedmask": "who-v2.mask.bed", "barcode": "who-v2.barcode.bed", "rules": "who-v2.rules.txt"}} \ No newline at end of file From aa58f36f73bc43863e3c8d93677c269a5ae944bf Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 30 Jan 2024 20:13:11 +0000 Subject: [PATCH 24/53] update default database --- tb-profiler | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/tb-profiler b/tb-profiler index 79f5612..106234e 100644 --- a/tb-profiler +++ b/tb-profiler @@ -348,7 +348,7 @@ group.add_argument('--bam','-a',help='BAM file (make sure it has been generated group.add_argument('--fasta','-f',help='Fasta file') group.add_argument('--vcf','-v',help='VCF file') input.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -input.add_argument('--db',default='tbdb',help='Mutation panel name') +input.add_argument('--db',default='who-v2',help='Mutation panel name') input.add_argument('--external_db',type=str,help='Path to db files prefix (overrides --db parameter)') output=parser_sub.add_argument_group("Output options") @@ -413,7 +413,7 @@ parser_sub.add_argument('--snps',action="store_true",help='Sample prefix') parser_sub.add_argument('--caller',default='freebayes',choices=["bcftools","freebayes","gatk"],type=str,help="Variant caller") parser_sub.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") parser_sub.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') +parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') parser_sub.add_argument('--spoligotype',action="store_true",help="Perform in-silico spoligotyping (experimental feature)") parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') @@ -437,7 +437,7 @@ parser_sub.add_argument('--docx',action="store_true",help="Add docx output. This parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') parser_sub.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") parser_sub.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') +parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) @@ -455,7 +455,7 @@ parser_sub.add_argument('--itol',action="store_true",help='Generate itol config parser_sub.add_argument('--full',action="store_true",help='Output mutations in main result file') parser_sub.add_argument('--all_variants',action="store_true",help='Output all variants in variant matrix') parser_sub.add_argument('--mark_missing',action="store_true",help='An asteriks will be use to mark predictions which are affected by missing data at a drug resistance position') -parser_sub.add_argument('--db',default='tbdb',help='Full path to mutation database json file to use') +parser_sub.add_argument('--db',default='who-v2',help='Full path to mutation database json file to use') parser_sub.add_argument('--format',default='txt',choices=['txt','csv'],help='Format of the output') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',nargs="+",default=["results"],help='Storage directory') @@ -473,7 +473,7 @@ parser_sub.add_argument('--csv',action="store_true",help="Add CSV output") parser_sub.add_argument('--docx',action="store_true",help="Add docx output. This requires docxtpl to be installed") parser_sub.add_argument('--docx_template',help="Supply custom template for --docx output") parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') -parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') +parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) From 9c39665105f7b3ee28cdf9c41c26c0865952f7c1 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Wed, 31 Jan 2024 17:19:00 +0000 Subject: [PATCH 25/53] small updates --- tb-profiler | 8 +++++++- tbprofiler/utils.py | 25 ++++++++++++++++++++++++- 2 files changed, 31 insertions(+), 2 deletions(-) diff --git a/tb-profiler b/tb-profiler index 106234e..7a21c1c 100644 --- a/tb-profiler +++ b/tb-profiler @@ -1,6 +1,7 @@ #! /usr/bin/env python3 import sys import pathogenprofiler as pp +from pathogenprofiler import TempFilePrefix import argparse from rich_argparse import ArgumentDefaultsRichHelpFormatter import json @@ -197,7 +198,12 @@ def main_update_tbdb(args): extra_args.append("--match_ref %s" % os.path.abspath(args.match_ref)) extra_args = " ".join(extra_args) - pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {extra_args} --load") + with TempFilePrefix() as tmpfile: + tbp.reformat_variant_csv_file("tbdb.csv",f'{tmpfile}.variants.csv') + tbp.reformat_variant_csv_file("tbdb.watchlist.csv",f'{tmpfile}.watchlist.csv') + pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} --csv {tmpfile}.variants.csv --watchlist {tmpfile}.watchlist.csv {extra_args} --load") + + # pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {extra_args} --load") os.chdir("../") pp.logging.info("Sucessfully updated TBDB") diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index d75fd90..95d125e 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -1,6 +1,7 @@ from collections import defaultdict from pathogenprofiler import Vcf import argparse +import csv def process_tb_profiler_args(args: argparse.Namespace) -> None: if args.snp_dist or args.update_phylo: @@ -61,4 +62,26 @@ def genes2rv(bed_file): #Chromosome 759310 763325 Rv0667 rpoB rifampicin rv2g = rv2genes(bed_file) gene2rv = {v:k for k,v in rv2g.items()} - return gene2rv \ No newline at end of file + return gene2rv + +def reformat_variant_csv_file(filename: str, outfile: str) -> None: + rows = [] + for row in csv.DictReader(open(filename)): + new_rows = { + 'Gene': row['Gene'], + } + if "Mutation" in row: + new_rows['Mutation'] = row['Mutation'] + info = {} + for k,v in row.items(): + if k in ('Gene','Mutation'): + continue + info[k] = v + info_string = ";".join([f"{k.lower()}={v}" for k,v in info.items()]) + new_rows['Info'] = info_string + rows.append(new_rows) + + with open(outfile, 'w') as csvfile: + writer = csv.DictWriter(csvfile, fieldnames=['Gene','Mutation','Info']) + writer.writeheader() + writer.writerows(rows) \ No newline at end of file From fddcbb0fc493a7b5f6295e8aedd0dcbb936748b0 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Wed, 7 Feb 2024 13:07:47 +0000 Subject: [PATCH 26/53] db bugs --- tb-profiler | 6 +++++- tbprofiler/utils.py | 12 +++++++++--- 2 files changed, 14 insertions(+), 4 deletions(-) diff --git a/tb-profiler b/tb-profiler index 7a21c1c..8c6ee06 100644 --- a/tb-profiler +++ b/tb-profiler @@ -224,8 +224,12 @@ def main_create_db(args): extra_files["barcode"] = args.barcode if args.rules: extra_files["rules"] = args.rules + + with TempFilePrefix() as tmpfile: + args.csv = tbp.reformat_variant_csv_file(args.csv,f'{tmpfile}.variants.csv') + args.watchlist = tbp.reformat_variant_csv_file(args.watchlist,f'{tmpfile}.watchlist.csv') - pp.create_db(args,extra_files=extra_files) + pp.create_db(args,extra_files=extra_files) def main_load_library(args): variables_file = "%(prefix)s.variables.json" % vars(args) diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index 95d125e..6f23fe4 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -64,14 +64,16 @@ def genes2rv(bed_file): gene2rv = {v:k for k,v in rv2g.items()} return gene2rv -def reformat_variant_csv_file(filename: str, outfile: str) -> None: +def reformat_variant_csv_file(filename: str, outfile: str) -> str: rows = [] + include_mutation = False for row in csv.DictReader(open(filename)): new_rows = { 'Gene': row['Gene'], } if "Mutation" in row: new_rows['Mutation'] = row['Mutation'] + include_mutation = True info = {} for k,v in row.items(): if k in ('Gene','Mutation'): @@ -80,8 +82,12 @@ def reformat_variant_csv_file(filename: str, outfile: str) -> None: info_string = ";".join([f"{k.lower()}={v}" for k,v in info.items()]) new_rows['Info'] = info_string rows.append(new_rows) + with open(outfile, 'w') as csvfile: - writer = csv.DictWriter(csvfile, fieldnames=['Gene','Mutation','Info']) + fieldnames = ['Gene','Mutation','Info'] if include_mutation else ['Gene','Info'] + writer = csv.DictWriter(csvfile, fieldnames=fieldnames) writer.writeheader() - writer.writerows(rows) \ No newline at end of file + writer.writerows(rows) + + return outfile \ No newline at end of file From 817168b0946de332289928d3312617e1050d1161 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Mon, 12 Feb 2024 13:14:54 +0000 Subject: [PATCH 27/53] update tests --- tb-profiler | 9 +++++---- tbprofiler/reformat.py | 4 ++-- tests/run_test.py | 5 +++-- 3 files changed, 10 insertions(+), 8 deletions(-) diff --git a/tb-profiler b/tb-profiler index 8c6ee06..d5c047e 100644 --- a/tb-profiler +++ b/tb-profiler @@ -108,9 +108,10 @@ def main_profile(args): for var in variants_profile: var.convert_to_dr_element() - + print(args.call_lineage) if args.call_lineage: barcode_result = tbp.barcode2lineage(pp.run_barcoder(args)) + if args.spoligotype: spoligotype = tbp.spoligotype(args) @@ -199,9 +200,9 @@ def main_update_tbdb(args): extra_args = " ".join(extra_args) with TempFilePrefix() as tmpfile: - tbp.reformat_variant_csv_file("tbdb.csv",f'{tmpfile}.variants.csv') - tbp.reformat_variant_csv_file("tbdb.watchlist.csv",f'{tmpfile}.watchlist.csv') - pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} --csv {tmpfile}.variants.csv --watchlist {tmpfile}.watchlist.csv {extra_args} --load") + # tbp.reformat_variant_csv_file("mutations.csv",f'{tmpfile}.variants.csv') + # tbp.reformat_variant_csv_file("watchlist.csv",f'{tmpfile}.watchlist.csv') + pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} --csv mutations.csv --watchlist watchlist.csv {extra_args} --load") # pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {extra_args} --load") os.chdir("../") diff --git a/tbprofiler/reformat.py b/tbprofiler/reformat.py index 55c730a..5b6de25 100644 --- a/tbprofiler/reformat.py +++ b/tbprofiler/reformat.py @@ -1,4 +1,4 @@ -from pathogenprofiler.models import BarcodeResult, Variant, BamQC, FastaQC, DrVariant, GenomicPosition +from pathogenprofiler.models import BarcodeResult, Variant, BamQC, FastaQC, DrVariant, GenomePosition # from .xdb import * from .models import Lineage, Result, TbDrVariant, TbVariant, ProfileResult, Spoligotype from typing import List, Tuple , Union, Optional @@ -185,7 +185,7 @@ def split_variants( fail_variants.append(var) return dr_variants,other_variants,fail_variants -def filter_missing_positions(missing_positions: List[GenomicPosition]) -> List[GenomicPosition]: +def filter_missing_positions(missing_positions: List[GenomePosition]) -> List[GenomePosition]: for pos in missing_positions: who_annotations = [ ann for ann in pos.annotation if diff --git a/tests/run_test.py b/tests/run_test.py index 7534f41..249f519 100644 --- a/tests/run_test.py +++ b/tests/run_test.py @@ -30,10 +30,11 @@ ('embB', 'p.Met306Val'), ] +db = 'testdb' + def test_db(): - run_cmd("tb-profiler update_tbdb --branch test --prefix testdb") + run_cmd(f"tb-profiler update_tbdb --branch test --prefix {db}") -db = 'testdb' def check_assertations(filename): results = json.load(open(filename)) From 8ba08017406e51bcc70b35d564dcc25acc25aa6b Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Mon, 12 Feb 2024 16:14:12 +0000 Subject: [PATCH 28/53] small bug --- tb-profiler | 2 +- tbprofiler/phylo.py | 2 ++ 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/tb-profiler b/tb-profiler index d5c047e..0451999 100644 --- a/tb-profiler +++ b/tb-profiler @@ -108,7 +108,7 @@ def main_profile(args): for var in variants_profile: var.convert_to_dr_element() - print(args.call_lineage) + if args.call_lineage: barcode_result = tbp.barcode2lineage(pp.run_barcoder(args)) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 71647d6..5b0a949 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -73,6 +73,8 @@ def prepare_sample_consensus(sample: str,input_vcf: str,args: argparse.Namespace run_cmd(f"bcftools index {tmp_vcf}") mask_bed = f"{args.files_prefix}.{s}.mask.bed" + if args.bam_for_depth: + args.bam = args.bam_for_depth generate_low_dp_mask(f"{args.bam}",args.conf['ref'],mask_bed) run_cmd(f"bcftools consensus --sample {s} -m {mask_bed} -M N -f {args.conf['ref']} {tmp_vcf} | sed 's/>/>{s} /' > {args.files_prefix}.{s}.consensus.fa") return f"{args.files_prefix}.{s}.consensus.fa" From 3bc017662774939bf53d16255744188303efe22c Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Mon, 12 Feb 2024 17:41:53 +0000 Subject: [PATCH 29/53] update drugs --- db/who-v2.variables.json | 41 +++++++++++++++++++++++++++++++++++++++- 1 file changed, 40 insertions(+), 1 deletion(-) diff --git a/db/who-v2.variables.json b/db/who-v2.variables.json index e0b276e..9eea379 100644 --- a/db/who-v2.variables.json +++ b/db/who-v2.variables.json @@ -1 +1,40 @@ -{"snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "streptomycin", "fluoroquinolones", "moxifloxacin", "ofloxacin", "levofloxacin", "ciprofloxacin", "aminoglycosides", "amikacin", "capreomycin", "kanamycin", "cycloserine", "ethionamide", "clofazimine", "para-aminosalicylic_acid", "delamanid", "bedaquiline", "linezolid"], "min-tb-profiler-version": "4.4.0", "version": {"name": "who-v2", "commit": "6aed5d9", "Author": "Jody Phelan ", "Date": "Tue Jan 30 14:21:48 2024 +0000"}, "amplicon": false, "files": {"ref": "who-v2.fasta", "gff": "who-v2.gff", "bed": "who-v2.bed", "json_db": "who-v2.dr.json", "variables": "who-v2.variables.json", "spoligotype_spacers": "who-v2.spoligotype_spacers.txt", "spoligotype_annotations": "who-v2.spoligotype_list.csv", "bedmask": "who-v2.mask.bed", "barcode": "who-v2.barcode.bed", "rules": "who-v2.rules.txt"}} \ No newline at end of file +{ + "snpEff_db": "Mycobacterium_tuberculosis_h37rv", + "drugs": [ + "rifampicin", + "isoniazid", + "ethambutol", + "pyrazinamide", + "moxifloxacin", + "levofloxacin", + "bedaquiline", + "delamanid", + "linezolid", + "streptomycin", + "amikacin", + "kanamycin", + "capreomycin", + "clofazimine", + "ethionamide" + ], + "min-tb-profiler-version": "4.4.0", + "version": { + "name": "who-v2", + "commit": "6aed5d9", + "Author": "Jody Phelan ", + "Date": "Tue Jan 30 14:21:48 2024 +0000" + }, + "amplicon": false, + "files": { + "ref": "who-v2.fasta", + "gff": "who-v2.gff", + "bed": "who-v2.bed", + "json_db": "who-v2.dr.json", + "variables": "who-v2.variables.json", + "spoligotype_spacers": "who-v2.spoligotype_spacers.txt", + "spoligotype_annotations": "who-v2.spoligotype_list.csv", + "bedmask": "who-v2.mask.bed", + "barcode": "who-v2.barcode.bed", + "rules": "who-v2.rules.txt" + } + } \ No newline at end of file From 46e6af2926d6e97905b1fb699dfb9d0384bf7828 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Thu, 7 Mar 2024 15:10:58 +0000 Subject: [PATCH 30/53] update conda --- conda/linux-latest.txt | 32 +++++++++++++++++++++++++++++--- 1 file changed, 29 insertions(+), 3 deletions(-) diff --git a/conda/linux-latest.txt b/conda/linux-latest.txt index 4316b14..8d76da3 100644 --- a/conda/linux-latest.txt +++ b/conda/linux-latest.txt @@ -3,7 +3,7 @@ # platform: linux-64 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2 -https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2023.11.17-hbcca054_0.conda +https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2 @@ -32,6 +32,7 @@ https://conda.anaconda.org/conda-forge/linux-64/isa-l-2.31.0-hd590300_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/jsoncpp-1.9.5-h4bd325d_1.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/keyutils-1.6.1-h166bdaf_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/lerc-4.0.0-h27087fc_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/libbrotlicommon-1.1.0-hd590300_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/libcbor-0.10.2-hcb278e6_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/libdeflate-1.18-h0b41bf4_0.conda https://conda.anaconda.org/conda-forge/linux-64/libev-4.33-hd590300_2.conda @@ -47,7 +48,7 @@ https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.cond https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_2.conda https://conda.anaconda.org/conda-forge/linux-64/oniguruma-6.9.9-hd590300_0.conda -https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.0-hd590300_1.conda +https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_0.conda https://conda.anaconda.org/conda-forge/linux-64/pixman-0.43.2-h59595ed_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/pthread-stubs-0.4-h36c2ea0_1001.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/wfa2-lib-2.3.4-h4ac6f70_0.tar.bz2 @@ -61,11 +62,14 @@ https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-xextproto-7.3.0-h0b41bf4_1003.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-xproto-7.0.31-h7f98852_1007.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/zip-3.0-hd590300_3.conda https://conda.anaconda.org/bioconda/linux-64/bedtools-2.31.1-hf5e1c6e_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/capnproto-0.9.1-ha19adfc_4.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/expat-2.5.0-hcb278e6_1.conda https://conda.anaconda.org/bioconda/linux-64/iqtree-2.2.6-h21ec9f0_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/jq-1.7.1-hd590300_0.conda +https://conda.anaconda.org/conda-forge/linux-64/libbrotlidec-1.1.0-hd590300_1.conda +https://conda.anaconda.org/conda-forge/linux-64/libbrotlienc-1.1.0-hd590300_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/libcap-2.69-h0f662aa_0.conda https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-13.2.0-h69a702a_4.conda @@ -87,6 +91,7 @@ https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/zlib-1.2.13-hd590300_5.conda https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.5-hfc55251_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/boost-cpp-1.78.0-h2c5509c_4.conda +https://conda.anaconda.org/conda-forge/linux-64/brotli-bin-1.1.0-hd590300_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/bwa-0.7.17-he4a0461_11.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/dsk-2.3.3-h43eeafb_4.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/freetype-2.12.1-h267a509_2.conda @@ -105,13 +110,18 @@ https://conda.anaconda.org/conda-forge/linux-64/python-3.10.13-hd12c33a_1_cpytho https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/samclip-0.4.0-hdfd78af_1.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/ucsc-fatovcf-448-h2a80c09_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libx11-1.8.7-h8ee46fc_0.conda +https://conda.anaconda.org/conda-forge/noarch/bitstring-3.1.9-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/brotli-1.1.0-hd590300_1.conda https://conda.anaconda.org/conda-forge/linux-64/brotli-python-1.1.0-py310hc6cd4ac_1.conda -https://conda.anaconda.org/conda-forge/noarch/certifi-2023.11.17-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/noarch/cachetools-4.2.4-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/certifi-2024.2.2-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.3.2-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/cycler-0.12.1-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/filelock-3.13.1-pyhd8ed1ab_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/fontconfig-2.14.2-h14ed4e7_0.conda https://conda.anaconda.org/conda-forge/noarch/idna-3.6-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/linux-64/kiwisolver-1.4.5-py310hd41b1e2_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/lcms2-2.15-h7f713cb_2.conda https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-21_linux64_openblas.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/libcups-2.3.3-h4637d8d_4.conda @@ -122,7 +132,12 @@ https://conda.anaconda.org/bioconda/linux-64/mafft-7.520-h031d066_3.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/markupsafe-2.1.4-py310h2372a71_0.conda https://conda.anaconda.org/conda-forge/noarch/mdurl-0.1.2-pyhd8ed1ab_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/minimap2-2.26-he4a0461_2.tar.bz2 +https://conda.anaconda.org/conda-forge/noarch/munkres-1.1.4-pyh9f0ad1d_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/openjpeg-2.5.0-h488ebb8_3.conda +https://conda.anaconda.org/conda-forge/noarch/packaging-23.2-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/noarch/pycparser-2.21-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/pygments-2.17.2-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.1.2-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/pysocks-1.7.1-pyha2e5f31_6.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/python-tzdata-2023.4-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/pytz-2023.4-pyhd8ed1ab_0.conda @@ -130,12 +145,16 @@ https://conda.anaconda.org/conda-forge/noarch/setuptools-69.0.3-pyhd8ed1ab_0.con https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/tomli-2.0.1-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/typing_extensions-4.9.0-pyha770c72_0.conda +https://conda.anaconda.org/conda-forge/linux-64/unicodedata2-15.1.0-py310h2372a71_0.conda https://conda.anaconda.org/conda-forge/noarch/wheel-0.42.0-pyhd8ed1ab_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxext-1.3.4-h0b41bf4_2.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxfixes-5.0.3-h7f98852_1004.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxrender-0.9.11-hd590300_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxt-1.3.0-hd590300_1.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/cairo-1.18.0-h3faef2a_0.conda +https://conda.anaconda.org/conda-forge/linux-64/cffi-1.16.0-py310h2fee648_0.conda +https://conda.anaconda.org/conda-forge/noarch/deprecation-2.1.0-pyh9f0ad1d_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.49.0-py310h2372a71_0.conda https://conda.anaconda.org/bioconda/linux-64/htslib-1.19.1-h81da01d_0.tar.bz2 https://conda.anaconda.org/bioconda/noarch/itol-config-0.1.0-pyhdfd78af_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/jinja2-3.1.3-pyhd8ed1ab_0.conda @@ -144,10 +163,12 @@ https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-21_linux64_openbl https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-21_linux64_openblas.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/markdown-it-py-3.0.0-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/linux-64/openssh-9.6p1-h2d3b35a_0.conda +https://conda.anaconda.org/conda-forge/linux-64/pillow-10.0.1-py310h29da1c1_1.conda https://conda.anaconda.org/conda-forge/noarch/pip-23.3.2-pyhd8ed1ab_0.conda https://conda.anaconda.org/bioconda/linux-64/pysam-0.22.0-py310h41dec4a_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/python-dateutil-2.8.2-pyhd8ed1ab_0.tar.bz2 https://conda.anaconda.org/conda-forge/noarch/python-docx-1.1.0-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/noarch/screed-1.1.3-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/tqdm-4.66.1-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/typing-extensions-4.9.0-hd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/urllib3-2.1.0-pyhd8ed1ab_0.conda @@ -165,16 +186,21 @@ https://conda.anaconda.org/bioconda/linux-64/samtools-1.19.2-h50ea8bc_0.tar.bz2 https://conda.anaconda.org/bioconda/linux-64/usher-0.6.3-hb389108_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxtst-1.2.3-h7f98852_1002.tar.bz2 https://conda.anaconda.org/bioconda/linux-64/bcftools-1.19-h8b25389_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/contourpy-1.2.0-py310hd41b1e2_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/lofreq-2.1.5-py310h47ef89e_10.tar.bz2 https://conda.anaconda.org/bioconda/linux-64/mash-2.3-ha9a2dd8_3.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/openjdk-17.0.8-hbf40d96_2.conda https://conda.anaconda.org/conda-forge/linux-64/pandas-2.2.0-py310hcc13569_0.conda https://conda.anaconda.org/conda-forge/noarch/pydantic-2.6.0-pyhd8ed1ab_0.conda https://conda.anaconda.org/conda-forge/noarch/rich-argparse-1.4.0-pyhd8ed1ab_0.conda +https://conda.anaconda.org/conda-forge/linux-64/scipy-1.12.0-py310hb13e2d6_2.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/tabixpp-1.1.2-hd68fcf3_1.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/gatk4-4.4.0.0-py36hdfd78af_0.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.8.3-py310h62c0568_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/pilon-1.24-hdfd78af_0.tar.bz2 https://conda.anaconda.org/bioconda/noarch/snpeff-5.2-hdfd78af_0.tar.bz2 https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/trimmomatic-0.39-hdfd78af_2.tar.bz2 https://conda.anaconda.org/bioconda/linux-64/vcflib-1.0.9-h146fbdb_4.tar.bz2 https://conda.anaconda.org/bioconda/linux-64/freebayes-1.3.6-hb0f3ef8_7.tar.bz2 +https://conda.anaconda.org/conda-forge/linux-64/sourmash-minimal-4.8.6-py310h373cc83_0.conda +https://conda.anaconda.org/bioconda/noarch/sourmash-4.8.6-hdfd78af_0.tar.bz2 \ No newline at end of file From 3ac03cf22957050bb492176b935896186e085eff Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Thu, 7 Mar 2024 15:11:13 +0000 Subject: [PATCH 31/53] add supplementary_bam --- tb-profiler | 2 +- tbprofiler/phylo.py | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/tb-profiler b/tb-profiler index 0451999..afead83 100644 --- a/tb-profiler +++ b/tb-profiler @@ -406,7 +406,7 @@ algorithm.add_argument('--ram',default=2,help='Maximum memory to use',type=int) other=parser_sub.add_argument_group("Other options") other.add_argument('--logging',type=str.upper,default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') other.add_argument('--delly_vcf',help=argparse.SUPPRESS) -other.add_argument('--bam_for_depth',help=argparse.SUPPRESS) +other.add_argument('--supplementary_bam',help=argparse.SUPPRESS) other.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) other.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") other.add_argument('--version', action='version', version="tb-profiler version %s" % tbp.__version__) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 5b0a949..1f7df56 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -73,8 +73,8 @@ def prepare_sample_consensus(sample: str,input_vcf: str,args: argparse.Namespace run_cmd(f"bcftools index {tmp_vcf}") mask_bed = f"{args.files_prefix}.{s}.mask.bed" - if args.bam_for_depth: - args.bam = args.bam_for_depth + if args.supplementary_bam: + args.bam = args.supplementary_bam generate_low_dp_mask(f"{args.bam}",args.conf['ref'],mask_bed) run_cmd(f"bcftools consensus --sample {s} -m {mask_bed} -M N -f {args.conf['ref']} {tmp_vcf} | sed 's/>/>{s} /' > {args.files_prefix}.{s}.consensus.fa") return f"{args.files_prefix}.{s}.consensus.fa" From 63819fc8f5842672985ece1e527b7915d5e0244d Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 09:14:36 +0000 Subject: [PATCH 32/53] update tools --- scripts/tb-profiler-tools | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index a31de67..6875865 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -38,7 +38,8 @@ parser_sub.set_defaults(func=main_phylogeny) parser_sub = subparsers.add_parser('prepare_usher', help='Update tbdb') parser_sub.add_argument('--tree',required=True,help="Samples files") -parser_sub.add_argument('--vcf',help="Temp firectory to process all files",type=str,default=".") +parser_sub.add_argument('--vcf',help="Temp firectory to process all files",required=True) +parser_sub.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') parser_sub.add_argument('--logging',default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') @@ -57,7 +58,7 @@ if hasattr(args, 'func'): if hasattr(args,'dir'): args.dir = os.path.abspath(args.dir) if hasattr(args, 'db'): - if args.db=="tbdb" and not args.external_db and pp.nofile(sys.base_prefix+"/share/tbprofiler/tbdb.fasta"): + if args.db=="who-v2" and not args.external_db and pp.nofile(sys.base_prefix+"/share/tbprofiler/who-v2.fasta"): pp.errlog("Can't find the tbdb file at %s. Please run 'tb-profiler update_tbdb' to load the default library or specify another using the '--external_db' flag" % sys.base_prefix,ext=True) if args.external_db: args.conf = pp.get_db(args.software_name,args.external_db) From ab292b00a242cf12c6edb0450131c55aaad47d4f Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 09:15:49 +0000 Subject: [PATCH 33/53] update tools --- scripts/tb-profiler-tools | 1 - 1 file changed, 1 deletion(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index 6875865..1094ba5 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -41,7 +41,6 @@ parser_sub.add_argument('--tree',required=True,help="Samples files") parser_sub.add_argument('--vcf',help="Temp firectory to process all files",required=True) parser_sub.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') -parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') parser_sub.add_argument('--logging',default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') parser_sub.set_defaults(func=prepare_usher) From 0dca64931b42c6a36a45ab6be43091f376d319f9 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 09:16:18 +0000 Subject: [PATCH 34/53] update tools --- scripts/tb-profiler-tools | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index 1094ba5..aaf0e2e 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -38,7 +38,7 @@ parser_sub.set_defaults(func=main_phylogeny) parser_sub = subparsers.add_parser('prepare_usher', help='Update tbdb') parser_sub.add_argument('--tree',required=True,help="Samples files") -parser_sub.add_argument('--vcf',help="Temp firectory to process all files",required=True) +parser_sub.add_argument('--vcf_file',help="Temp firectory to process all files",required=True) parser_sub.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--logging',default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') From 618f91589294da09f71f158e835ed1d5a816d41d Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 09:18:09 +0000 Subject: [PATCH 35/53] update tools --- scripts/tb-profiler-tools | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index aaf0e2e..f81f28d 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -20,7 +20,7 @@ def main_phylogeny(args): # cleanup(args.files_prefix) def prepare_usher(args): - tbp.phylo.prepare_usher(args) + tbp.phylo.prepare_usher(args.tree,args.vcf) argparser = argparse.ArgumentParser(description='TBProfiler pipeline',formatter_class=argparse.ArgumentDefaultsHelpFormatter) @@ -38,7 +38,7 @@ parser_sub.set_defaults(func=main_phylogeny) parser_sub = subparsers.add_parser('prepare_usher', help='Update tbdb') parser_sub.add_argument('--tree',required=True,help="Samples files") -parser_sub.add_argument('--vcf_file',help="Temp firectory to process all files",required=True) +parser_sub.add_argument('--vcf',help="Temp firectory to process all files",required=True) parser_sub.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--logging',default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') From d0aa639623436325d83f0a1fefabf73779615a0d Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 09:31:34 +0000 Subject: [PATCH 36/53] increase mp efficiency --- tbprofiler/phylo.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 1f7df56..920e484 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -32,10 +32,10 @@ def usher_add_sample(args: argparse.Namespace) -> None: lock = filelock.SoftFileLock(args.input_phylo + ".lock") cwd = os.getcwd() + args.tmp_masked_vcf = get_consensus_vcf(args.prefix, args.wg_vcf,args) with lock: os.chdir(args.temp) - args.tmp_masked_vcf = get_consensus_vcf(args.prefix, args.wg_vcf,args) run_cmd("usher --vcf %(tmp_masked_vcf)s --load-mutation-annotated-tree %(input_phylo)s --save-mutation-annotated-tree %(tmp_output_phylo)s --write-uncondensed-final-tree" % vars(args)) run_cmd("mv uncondensed-final-tree.nh %(output_nwk)s" % vars(args)) run_cmd("matUtils extract -i %(tmp_output_phylo)s -t phylo.nwk" % vars(args)) From 74fa999f2cc11f83c4513d44348b8de2401743d1 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 11:38:33 +0000 Subject: [PATCH 37/53] minor bugs --- tbprofiler/phylo.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 920e484..d1cb4ed 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -73,7 +73,7 @@ def prepare_sample_consensus(sample: str,input_vcf: str,args: argparse.Namespace run_cmd(f"bcftools index {tmp_vcf}") mask_bed = f"{args.files_prefix}.{s}.mask.bed" - if args.supplementary_bam: + if hasattr(args,'supplementary_bam') and args.supplementary_bam: args.bam = args.supplementary_bam generate_low_dp_mask(f"{args.bam}",args.conf['ref'],mask_bed) run_cmd(f"bcftools consensus --sample {s} -m {mask_bed} -M N -f {args.conf['ref']} {tmp_vcf} | sed 's/>/>{s} /' > {args.files_prefix}.{s}.consensus.fa") From 2f186a8d7011f62a6b3a8e357be3a0fb9e187965 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 14:03:05 +0000 Subject: [PATCH 38/53] minor bugs --- tbprofiler/phylo.py | 1 + 1 file changed, 1 insertion(+) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index d1cb4ed..704bd08 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -19,6 +19,7 @@ def usher_add_sample(args: argparse.Namespace) -> None: else: args.wg_vcf = args.files_prefix + ".vcf.gz" + print(args.wg_vcf) args.tmp_masked_vcf = f"{args.files_prefix}.masked.vcf.gz" args.input_phylo = f"{args.dir}/results/phylo.pb" args.tmp_output_phylo = f"{args.files_prefix}.pb" From a553046e358ce05d211ff3343363d09e4317882b Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 8 Mar 2024 19:18:16 +0000 Subject: [PATCH 39/53] debug --- tbprofiler/phylo.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 704bd08..6cb968c 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -70,7 +70,7 @@ def prepare_usher(treefile: str,vcf_file: str) -> None: def prepare_sample_consensus(sample: str,input_vcf: str,args: argparse.Namespace) -> str: s = sample tmp_vcf = f"{args.files_prefix}.{s}.vcf.gz" - run_cmd(f"bcftools norm -m - {input_vcf} | bcftools view -T ^{args.conf['bedmask']} | bcftools filter --SnpGap 50 | annotate_maaf.py | bcftools filter -S . -e 'MAAF<0.7' |bcftools filter -S . -e 'FMT/DP<20' | rename_vcf_sample.py --sample-name {s} | bcftools view -v snps -Oz -o {tmp_vcf}") + run_cmd(f"bcftools norm -m - {input_vcf} | bcftools view -T ^{args.conf['bedmask']} | bcftools filter --SnpGap 50 | bcftools view -v snps | annotate_maaf.py | bcftools filter -S . -e 'MAAF<0.7' |bcftools filter -S . -e 'FMT/DP<20' | rename_vcf_sample.py --sample-name {s} | bcftools view -v snps -Oz -o {tmp_vcf}") run_cmd(f"bcftools index {tmp_vcf}") mask_bed = f"{args.files_prefix}.{s}.mask.bed" From fdf60be977c0edb543071288a1da4102b46162ca Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 12 Mar 2024 10:52:45 +0000 Subject: [PATCH 40/53] update conda env --- conda/linux-latest.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/conda/linux-latest.txt b/conda/linux-latest.txt index 8d76da3..a8cf8c0 100644 --- a/conda/linux-latest.txt +++ b/conda/linux-latest.txt @@ -2,6 +2,7 @@ # $ conda create --name --file # platform: linux-64 @EXPLICIT +https://conda.anaconda.org/bioconda/linux-64/seqkit-2.8.0-h9ee0642_0.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2 https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2 From 7b0f73de7a19947cb3b241d5e7cb19ff53afc783 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Tue, 12 Mar 2024 10:53:00 +0000 Subject: [PATCH 41/53] bump version --- tbprofiler/__init__.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tbprofiler/__init__.py b/tbprofiler/__init__.py index bac0dc0..96236f8 100644 --- a/tbprofiler/__init__.py +++ b/tbprofiler/__init__.py @@ -7,4 +7,4 @@ from .snp_dists import * from .phylo import * -__version__ = "5.1.0" +__version__ = "6.0.0" From b543dfa27dee0615763814ebe8f9609282fe9362 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 15 Mar 2024 21:48:26 +0000 Subject: [PATCH 42/53] db version checks --- tb-profiler | 15 +++++++++------ tbprofiler/utils.py | 33 +++++++++++++++++---------------- 2 files changed, 26 insertions(+), 22 deletions(-) diff --git a/tb-profiler b/tb-profiler index afead83..208f9dc 100644 --- a/tb-profiler +++ b/tb-profiler @@ -192,6 +192,12 @@ def main_update_tbdb(args): pp.run_cmd("git pull") if args.commit: pp.run_cmd(f"git checkout {args.commit}") + + min_required_version = json.load(open('variables.json'))['min-tb-profiler-version'] + if tbp.__version__ < min_required_version: + logging.error(f"Your version of tb-profiler ({tbp.__version__}) is too old to use this version of the database. Please update tb-profiler to at least {min_required_version}") + sys.exit() + extra_args = [] if os.path.isfile('rules.txt'): extra_args.append("--rules rules.txt") @@ -200,11 +206,8 @@ def main_update_tbdb(args): extra_args = " ".join(extra_args) with TempFilePrefix() as tmpfile: - # tbp.reformat_variant_csv_file("mutations.csv",f'{tmpfile}.variants.csv') - # tbp.reformat_variant_csv_file("watchlist.csv",f'{tmpfile}.watchlist.csv') pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} --csv mutations.csv --watchlist watchlist.csv {extra_args} --load") - # pp.run_cmd(f"tb-profiler create_db --prefix {args.prefix} {extra_args} --load") os.chdir("../") pp.logging.info("Sucessfully updated TBDB") @@ -228,7 +231,7 @@ def main_create_db(args): with TempFilePrefix() as tmpfile: args.csv = tbp.reformat_variant_csv_file(args.csv,f'{tmpfile}.variants.csv') - args.watchlist = tbp.reformat_variant_csv_file(args.watchlist,f'{tmpfile}.watchlist.csv') + args.watchlist = tbp.reformat_variant_csv_file([args.watchlist],f'{tmpfile}.watchlist.csv') pp.create_db(args,extra_files=extra_files) @@ -495,8 +498,8 @@ parser_sub.add_argument('--logging',type=str.upper,default="INFO",choices=["DEBU parser_sub.set_defaults(func=main_reformat) parser_sub = subparsers.add_parser('create_db', help='Generate the files required to run tb-profiler', formatter_class=ArgumentDefaultsRichHelpFormatter) -parser_sub.add_argument('--prefix','-p',default="tbdb",type=str,help='The input CSV file containing the mutations') -parser_sub.add_argument('--csv','-c',default="mutations.csv",type=str,help='The prefix for all output files') +parser_sub.add_argument('--prefix','-p',type=str,help='The input CSV file containing the mutations',required=True) +parser_sub.add_argument('--csv','-c',nargs="+",default=["mutations.csv"],type=str,help='The prefix for all output files') parser_sub.add_argument('--watchlist','-w',default="watchlist.csv",type=str,help='A csv file containing genes to profile but without any specific associated mutations') parser_sub.add_argument('--spoligotypes',default="spoligotype_spacers.txt",type=str,help='A file containing a list of spoligotype spacers') parser_sub.add_argument('--spoligotype_annotations',default="spoligotype_list.csv") diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index 6f23fe4..452fe70 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -64,24 +64,25 @@ def genes2rv(bed_file): gene2rv = {v:k for k,v in rv2g.items()} return gene2rv -def reformat_variant_csv_file(filename: str, outfile: str) -> str: +def reformat_variant_csv_file(files: list, outfile: str) -> str: rows = [] include_mutation = False - for row in csv.DictReader(open(filename)): - new_rows = { - 'Gene': row['Gene'], - } - if "Mutation" in row: - new_rows['Mutation'] = row['Mutation'] - include_mutation = True - info = {} - for k,v in row.items(): - if k in ('Gene','Mutation'): - continue - info[k] = v - info_string = ";".join([f"{k.lower()}={v}" for k,v in info.items()]) - new_rows['Info'] = info_string - rows.append(new_rows) + for filename in files: + for row in csv.DictReader(open(filename)): + new_rows = { + 'Gene': row['Gene'], + } + if "Mutation" in row: + new_rows['Mutation'] = row['Mutation'] + include_mutation = True + info = {} + for k,v in row.items(): + if k in ('Gene','Mutation'): + continue + info[k] = v + info_string = ";".join([f"{k.lower()}={v}" for k,v in info.items()]) + new_rows['Info'] = info_string + rows.append(new_rows) with open(outfile, 'w') as csvfile: From 7f5e462ead0d05c68c1e4fdf7877f4701a5cc479 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Fri, 15 Mar 2024 21:48:37 +0000 Subject: [PATCH 43/53] test checks --- tests/example_collate.txt | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/tests/example_collate.txt b/tests/example_collate.txt index cfa7382..9906e45 100644 --- a/tests/example_collate.txt +++ b/tests/example_collate.txt @@ -1,7 +1,7 @@ -sample main_lineage sub_lineage spoligotype drtype target_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid ethambutol pyrazinamide streptomycin fluoroquinolones moxifloxacin ofloxacin levofloxacin ciprofloxacin aminoglycosides amikacin capreomycin kanamycin cycloserine ethionamide clofazimine para-aminosalicylic_acid delamanid bedaquiline linezolid -por5A_bcftools lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - -por5A_freebayes lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - -por5A_gatk lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 28 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - -por5A_lofreq lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 23 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - -por5A_pilon lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 25 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - -por5_vcf lineage4 lineage4.3.4.2 - MDR-TB nan nan nan 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) - - - - - +sample main_lineage sub_lineage spoligotype drtype target_median_depth pct_reads_mapped num_reads_mapped num_dr_variants num_other_variants rifampicin isoniazid ethambutol pyrazinamide moxifloxacin levofloxacin bedaquiline delamanid pretomanid linezolid streptomycin amikacin kanamycin capreomycin clofazimine ethionamide +por5A_bcftools lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) +por5A_freebayes lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) +por5A_gatk lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 28 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) +por5A_lofreq lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 23 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) +por5A_pilon lineage4 lineage4.3.4.2 - MDR-TB 59.0 99.9 54238 4 25 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) +por5_vcf lineage4 lineage4.3.4.2 - MDR-TB nan nan nan 4 24 rpoB p.Ser450Leu (1.00) inhA c.-777C>T (1.00) embB p.Met306Val (1.00) pncA p.Val125Gly (1.00) - - - - - - - - - - - inhA c.-777C>T (1.00) From f1b3dd2c7313ffd9fbd1c20f0a638824683f74b1 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sat, 16 Mar 2024 17:42:22 +0000 Subject: [PATCH 44/53] remove print --- tbprofiler/phylo.py | 1 - 1 file changed, 1 deletion(-) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index 6cb968c..f4f4155 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -19,7 +19,6 @@ def usher_add_sample(args: argparse.Namespace) -> None: else: args.wg_vcf = args.files_prefix + ".vcf.gz" - print(args.wg_vcf) args.tmp_masked_vcf = f"{args.files_prefix}.masked.vcf.gz" args.input_phylo = f"{args.dir}/results/phylo.pb" args.tmp_output_phylo = f"{args.files_prefix}.pb" From 130a7f782a16ed631f5fce58aff2b35521c46fb7 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 01:01:21 +0000 Subject: [PATCH 45/53] add db version checks --- tb-profiler | 10 ++++++---- tbprofiler/utils.py | 20 +++++++++++++++++++- 2 files changed, 25 insertions(+), 5 deletions(-) diff --git a/tb-profiler b/tb-profiler index 208f9dc..a0c9548 100644 --- a/tb-profiler +++ b/tb-profiler @@ -193,10 +193,8 @@ def main_update_tbdb(args): if args.commit: pp.run_cmd(f"git checkout {args.commit}") - min_required_version = json.load(open('variables.json'))['min-tb-profiler-version'] - if tbp.__version__ < min_required_version: - logging.error(f"Your version of tb-profiler ({tbp.__version__}) is too old to use this version of the database. Please update tb-profiler to at least {min_required_version}") - sys.exit() + + extra_args = [] if os.path.isfile('rules.txt'): @@ -212,6 +210,10 @@ def main_update_tbdb(args): pp.logging.info("Sucessfully updated TBDB") def main_create_db(args): + + version_string = json.load(open('variables.json'))['tb-profiler-version'] + tbp.check_db_version(version_string,tbp.__version__) + if args.no_overwrite: dbs = pp.list_db(args.software_name) names = [x['version']['name'] for x in dbs] diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index 452fe70..3a6acaf 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -2,6 +2,8 @@ from pathogenprofiler import Vcf import argparse import csv +import logging +import re def process_tb_profiler_args(args: argparse.Namespace) -> None: if args.snp_dist or args.update_phylo: @@ -91,4 +93,20 @@ def reformat_variant_csv_file(files: list, outfile: str) -> str: writer.writeheader() writer.writerows(rows) - return outfile \ No newline at end of file + return outfile + +def check_db_version(db_version: str, tbprofiler_version: str) -> None: + print(db_version) + for d in db_version.split(","): + r = re.search('([<>=]+)(.*)',d) + if r==None: + logging.error(f"Invalid version string: {d}") + quit() + + d = f"{r.group(1)} '{r.group(2)}'" + if eval(f"'{tbprofiler_version}' {d}")==False: + if ">" in d: + logging.error(f"Your version of tb-profiler ({tbprofiler_version}) is too old to use this version of the database. Please update tb-profiler to {db_version}") + else: + logging.error(f"Your version of tb-profiler ({tbprofiler_version}) is too new to use this version of the database. Please update the database to {db_version}") + quit() \ No newline at end of file From 26a6a91898b8a20c06642489a74322726b4402b6 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 01:06:31 +0000 Subject: [PATCH 46/53] update db --- tb-profiler | 20 ++++++++++++-------- 1 file changed, 12 insertions(+), 8 deletions(-) diff --git a/tb-profiler b/tb-profiler index a0c9548..db7353a 100644 --- a/tb-profiler +++ b/tb-profiler @@ -193,7 +193,11 @@ def main_update_tbdb(args): if args.commit: pp.run_cmd(f"git checkout {args.commit}") - + if args.prefix==None: + if args.branch == "master": + args.prefix = "tbdb" + else: + args.prefix = args.branch extra_args = [] @@ -213,7 +217,7 @@ def main_create_db(args): version_string = json.load(open('variables.json'))['tb-profiler-version'] tbp.check_db_version(version_string,tbp.__version__) - + if args.no_overwrite: dbs = pp.list_db(args.software_name) names = [x['version']['name'] for x in dbs] @@ -364,7 +368,7 @@ group.add_argument('--bam','-a',help='BAM file (make sure it has been generated group.add_argument('--fasta','-f',help='Fasta file') group.add_argument('--vcf','-v',help='VCF file') input.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -input.add_argument('--db',default='who-v2',help='Mutation panel name') +input.add_argument('--db',default='tbdb',help='Mutation panel name') input.add_argument('--external_db',type=str,help='Path to db files prefix (overrides --db parameter)') output=parser_sub.add_argument_group("Output options") @@ -429,7 +433,7 @@ parser_sub.add_argument('--snps',action="store_true",help='Sample prefix') parser_sub.add_argument('--caller',default='freebayes',choices=["bcftools","freebayes","gatk"],type=str,help="Variant caller") parser_sub.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") parser_sub.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') +parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') parser_sub.add_argument('--spoligotype',action="store_true",help="Perform in-silico spoligotyping (experimental feature)") parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') @@ -453,7 +457,7 @@ parser_sub.add_argument('--docx',action="store_true",help="Add docx output. This parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') parser_sub.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") parser_sub.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') -parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') +parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) @@ -471,7 +475,7 @@ parser_sub.add_argument('--itol',action="store_true",help='Generate itol config parser_sub.add_argument('--full',action="store_true",help='Output mutations in main result file') parser_sub.add_argument('--all_variants',action="store_true",help='Output all variants in variant matrix') parser_sub.add_argument('--mark_missing',action="store_true",help='An asteriks will be use to mark predictions which are affected by missing data at a drug resistance position') -parser_sub.add_argument('--db',default='who-v2',help='Full path to mutation database json file to use') +parser_sub.add_argument('--db',default='tbdb',help='Full path to mutation database json file to use') parser_sub.add_argument('--format',default='txt',choices=['txt','csv'],help='Format of the output') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',nargs="+",default=["results"],help='Storage directory') @@ -489,7 +493,7 @@ parser_sub.add_argument('--csv',action="store_true",help="Add CSV output") parser_sub.add_argument('--docx',action="store_true",help="Add docx output. This requires docxtpl to be installed") parser_sub.add_argument('--docx_template',help="Supply custom template for --docx output") parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') -parser_sub.add_argument('--db',default='who-v2',help='Mutation panel name') +parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) @@ -535,7 +539,7 @@ parser_sub.add_argument('--logging',type=str.upper,default="INFO",choices=["DEBU parser_sub.set_defaults(func=main_load_library) parser_sub = subparsers.add_parser('update_tbdb', help='Pull the latest tbdb library and load', formatter_class=ArgumentDefaultsRichHelpFormatter) -parser_sub.add_argument('--prefix','-p',default="tbdb",help='Database name') +parser_sub.add_argument('--prefix','-p',help='Database name') parser_sub.add_argument('--repo','-r',default="https://github.com/jodyphelan/tbdb.git",help='Repository to pull from') parser_sub.add_argument('--branch','-b',default="master",help='Branch to pull from') parser_sub.add_argument('--commit','-c',help='Git commit hash to checkout (default: latest)') From 17eb8c11d19f79b6a7dad99ef3f2d3006161eb22 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 12:19:18 +0000 Subject: [PATCH 47/53] updates to output --- scripts/tb-profiler-tools | 2 +- tb-profiler | 67 +++++++++++-------------------------- tbprofiler/models.py | 11 ++++++ tbprofiler/reformat.py | 17 +++++++++- tbprofiler/spoligotyping.py | 4 +++ 5 files changed, 52 insertions(+), 49 deletions(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index f81f28d..dc9c4c3 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -17,7 +17,7 @@ def cleanup(files_prefix): def main_phylogeny(args): tbp.phylo.calculate_phylogeny(args) - # cleanup(args.files_prefix) + cleanup(args.files_prefix) def prepare_usher(args): tbp.phylo.prepare_usher(args.tree,args.vcf) diff --git a/tb-profiler b/tb-profiler index db7353a..6d9d02c 100644 --- a/tb-profiler +++ b/tb-profiler @@ -81,6 +81,12 @@ def multisample_vcf_run(args): args.vcf = args.tmp_vcf main_profile(args) +def create_output_directories(args,directories=["bam","vcf","results"]): + if pp.nofolder(args.dir): + os.mkdir(args.dir) + for d in directories: + if pp.nofolder(args.dir+"/"+d): + os.mkdir(args.dir+"/"+d) def main_profile(args): pp.process_args(args) @@ -90,11 +96,6 @@ def main_profile(args): if nsamples>1: return multisample_vcf_run(args) - ### Create folders for results if they don't exist ### - if pp.nofolder(args.dir): - os.mkdir(args.dir) - - tbp.process_tb_profiler_args(args) variants_profile = pp.run_profiler(args) @@ -249,42 +250,21 @@ def main_load_library(args): def main_lineage(args): - results = { - "id":args.prefix, - "tbprofiler_version": tbp.__version__, - "db_version": args.conf["version"] - } - results["pipeline"] = [ - {"Analysis":"Variant calling","Program":args.caller} - ] - args.bam_file = args.bam - bam = pp.Bam(args.bam,args.bam,args.conf["ref"]) - mutations = bam.get_bed_gt(args.conf["barcode"],args.conf["ref"],args.caller,args.platform) - - snps_file = args.prefix+".lineage.snps.txt" if args.snps else None - - if args.spoligotype: - results["spoligotype"] = tbp.spoligotype(args) - - results["barcode"] = pp.barcode(mutations,args.conf["barcode"],snps_file=snps_file) - tbp.barcode2lineage(results) - tbp.write_outputs(args,results,template_file=args.text_template) + create_output_directories(args,directories=["results"]) + args.data_source = "bam" + barcode_result = tbp.barcode2lineage(pp.run_barcoder(args)) + result = tbp.create_lineage_result(args,barcode_result) + json_output = args.dir+"/results/"+args.prefix+".lineage.json" + open(json_output,"w").write(result.model_dump_json(indent=4)) def main_spoligotype(args): - if pp.nofolder("results"): - os.mkdir("results") + create_output_directories(args,directories=["results"]) if args.bam: args.bam_file = args.bam - results = { - "id":args.prefix, - "tbprofiler_version": tbp.__version__, - "spoligotype":tbp.spoligotype(args), - "db_version": args.conf["version"] - } - results["pipeline"] = [ - {"Analysis":"Kmer-counting","Program":"kmc"} - ] - tbp.write_outputs(args,results,template_file=args.text_template) + spoligotype = tbp.spoligotype(args) + json_output = args.dir+"/results/"+args.prefix+".spoligotype.json" + open(json_output,"w").write(spoligotype.model_dump_json(indent=4)) + def main_collate(args): tbp.collate_results(args) @@ -298,11 +278,6 @@ def main_reformat(args): args.prefix = result.id tbp.write_outputs(args,result,template_file=args.text_template) -def create_output_directories(args): - for d in ["bam","vcf","results"]: - if pp.nofolder(args.dir+"/"+d): - os.mkdir(args.dir+"/"+d) - def main_batch(args): if args.args==None: args.args="" @@ -426,17 +401,15 @@ parser_sub.set_defaults(func=main_profile) parser_sub = subparsers.add_parser('lineage', help='Profile only lineage', formatter_class=ArgumentDefaultsRichHelpFormatter) parser_sub.add_argument('--bam','-a',required=True, help='BAM file. Make sure it has been generated using the H37Rv genome (GCA_000195955.2)') parser_sub.add_argument('--prefix','-p',default="tbprofiler",help='Sample prefix') -parser_sub.add_argument('--txt',action="store_true",help="Add text output") -parser_sub.add_argument('--csv',action="store_true",help="Add CSV output") -parser_sub.add_argument('--docx',action="store_true",help="Add docx output. This requires docxtpl to be installed") parser_sub.add_argument('--snps',action="store_true",help='Sample prefix') parser_sub.add_argument('--caller',default='freebayes',choices=["bcftools","freebayes","gatk"],type=str,help="Variant caller") parser_sub.add_argument('--kmer_counter',default='kmc',choices=["kmc","dsk"],type=str,help="Kmer counter") parser_sub.add_argument('--platform','-m',choices=["illumina","nanopore","pacbio"],default="illumina",help='NGS Platform used to generate data') parser_sub.add_argument('--db',default='tbdb',help='Mutation panel name') -parser_sub.add_argument('--spoligotype',action="store_true",help="Perform in-silico spoligotyping (experimental feature)") +parser_sub.add_argument('--spoligotype',action="store_true",help="Perform in-silico spoligotyping") parser_sub.add_argument('--external_db',type=str,help='Path to db files prefix (overrides "--db" parameter)') parser_sub.add_argument('--text_template',type=str,help='Jinja2 formatted template for output') +parser_sub.add_argument('--threads','-t',default=1,help='Threads to use',type=int) parser_sub.add_argument('--dir','-d',default=".",help='Storage directory') parser_sub.add_argument('--no_clean', action='store_true',help=argparse.SUPPRESS) parser_sub.add_argument('--temp',help="Temp firectory to process all files",type=str,default=".") @@ -444,7 +417,7 @@ parser_sub.add_argument('--version', action='version', version="tb-profiler vers parser_sub.add_argument('--logging',type=str.upper,default="INFO",choices=["DEBUG","INFO","WARNING","ERROR","CRITICAL"],help='Logging level') parser_sub.set_defaults(func=main_lineage) -parser_sub = subparsers.add_parser('spoligotype', help='Profile spoligotype (experimental feature)', formatter_class=ArgumentDefaultsRichHelpFormatter) +parser_sub = subparsers.add_parser('spoligotype', help='Profile spoligotype', formatter_class=ArgumentDefaultsRichHelpFormatter) group = parser_sub.add_mutually_exclusive_group(required=True) group.add_argument('--read1','-1',help='First read file') parser_sub.add_argument('--read2','-2',help='Second read file') diff --git a/tbprofiler/models.py b/tbprofiler/models.py index a0f717e..be9be22 100644 --- a/tbprofiler/models.py +++ b/tbprofiler/models.py @@ -95,3 +95,14 @@ def get_qc(self): else: text = "Not available for VCF input" return text + +class LineageResult(Result): + lineage: Optional[List[Lineage]] = [] + main_lineage: str = None + sub_lineage: str = None + + def get_lineage(self): + if self.lineage: + return object_list2text(l = self.lineage) + else: + return "Not available" diff --git a/tbprofiler/reformat.py b/tbprofiler/reformat.py index 5b6de25..49a0052 100644 --- a/tbprofiler/reformat.py +++ b/tbprofiler/reformat.py @@ -1,6 +1,6 @@ from pathogenprofiler.models import BarcodeResult, Variant, BamQC, FastaQC, DrVariant, GenomePosition # from .xdb import * -from .models import Lineage, Result, TbDrVariant, TbVariant, ProfileResult, Spoligotype +from .models import Lineage, Result, TbDrVariant, TbVariant, ProfileResult, Spoligotype, LineageResult from typing import List, Tuple , Union, Optional from .utils import get_gene2drugs import argparse @@ -197,6 +197,21 @@ def filter_missing_positions(missing_positions: List[GenomePosition]) -> List[Ge return [pos for pos in missing_positions if len(pos.annotation)>0] +def create_lineage_result( + args: argparse.Namespace, + lineage: List[Lineage] +): + main_lineage, sub_lineage = get_main_lineage(lineage) + data = { + 'id':args.prefix, + 'lineage':lineage, + 'sub_lineage':sub_lineage, + 'main_lineage':main_lineage, + 'tbprofiler_version':args.version, + 'db_version':args.conf['version'], + } + return LineageResult(**data) + def create_resistance_result( args: argparse.Namespace, notes: List[str], diff --git a/tbprofiler/spoligotyping.py b/tbprofiler/spoligotyping.py index a8d49ba..1966930 100644 --- a/tbprofiler/spoligotyping.py +++ b/tbprofiler/spoligotyping.py @@ -2,6 +2,7 @@ import pathogenprofiler as pp import csv from .models import Spoligotype +import logging def spoligotype(args): if "bam_file" in vars(args) and args.bam_file: @@ -10,6 +11,9 @@ def spoligotype(args): result = fq2spoligotype(r1=args.read1,r2=args.read2,files_prefix=args.files_prefix,conf=args.conf,threads=args.threads,max_mem=args.ram,kmer_counter=args.kmer_counter) elif args.fasta: result = fa2spoligotype(args.fasta,args.files_prefix,args.conf,threads=args.threads,max_mem=args.ram,counter=args.kmer_counter) + else: + logging.error("Please provide a valid input file") + quit() ann = get_spoligotype_annotation(result["octal"],args.conf['spoligotype_annotations']) result.update(ann) From 761676b9bc298822875168bfba7ddf6124c49e12 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 12:33:13 +0000 Subject: [PATCH 48/53] phylo function update --- tb-profiler | 2 ++ 1 file changed, 2 insertions(+) diff --git a/tb-profiler b/tb-profiler index 6d9d02c..07388d3 100644 --- a/tb-profiler +++ b/tb-profiler @@ -166,6 +166,8 @@ def main_profile(args): # ### Move files to respective directories ### + if os.path.isfile("%s.nwk" % args.files_prefix): + shutil.copy("%s.nwk" % args.files_prefix,"%s/results/latest.nwk" % (args.dir)) result_files = { "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.vcf.gz" % (args.dir,args.prefix), From 0fee0051868296e89d3a676a9b6814ca3ccbcb24 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 12:33:16 +0000 Subject: [PATCH 49/53] phylo function update --- tb-profiler | 1 + 1 file changed, 1 insertion(+) diff --git a/tb-profiler b/tb-profiler index 07388d3..e27cf08 100644 --- a/tb-profiler +++ b/tb-profiler @@ -168,6 +168,7 @@ def main_profile(args): # ### Move files to respective directories ### if os.path.isfile("%s.nwk" % args.files_prefix): shutil.copy("%s.nwk" % args.files_prefix,"%s/results/latest.nwk" % (args.dir)) + result_files = { "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.vcf.gz" % (args.dir,args.prefix), From e56bb9daebdb3de14b3dcfbea5af4d04a1fa114f Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 12:37:39 +0000 Subject: [PATCH 50/53] phylo function update --- tbprofiler/phylo.py | 1 - 1 file changed, 1 deletion(-) diff --git a/tbprofiler/phylo.py b/tbprofiler/phylo.py index f4f4155..10ae951 100644 --- a/tbprofiler/phylo.py +++ b/tbprofiler/phylo.py @@ -38,7 +38,6 @@ def usher_add_sample(args: argparse.Namespace) -> None: run_cmd("usher --vcf %(tmp_masked_vcf)s --load-mutation-annotated-tree %(input_phylo)s --save-mutation-annotated-tree %(tmp_output_phylo)s --write-uncondensed-final-tree" % vars(args)) run_cmd("mv uncondensed-final-tree.nh %(output_nwk)s" % vars(args)) - run_cmd("matUtils extract -i %(tmp_output_phylo)s -t phylo.nwk" % vars(args)) for f in ["mutation-paths.txt","placement_stats.tsv"]: if os.path.exists(f): os.remove(f) From 5921c03ccab8d48a89879e915b4cca1386bcc5cd Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 14:32:08 +0000 Subject: [PATCH 51/53] remove verbose --- tb-profiler | 4 ++-- tbprofiler/utils.py | 1 - 2 files changed, 2 insertions(+), 3 deletions(-) diff --git a/tb-profiler b/tb-profiler index e27cf08..e269af9 100644 --- a/tb-profiler +++ b/tb-profiler @@ -168,7 +168,7 @@ def main_profile(args): # ### Move files to respective directories ### if os.path.isfile("%s.nwk" % args.files_prefix): shutil.copy("%s.nwk" % args.files_prefix,"%s/results/latest.nwk" % (args.dir)) - + result_files = { "%s.targets.vcf.gz" % args.files_prefix: "%s/vcf/%s.targets.vcf.gz" % (args.dir,args.prefix), @@ -487,7 +487,7 @@ parser_sub.add_argument('--spoligotypes',default="spoligotype_spacers.txt",type= parser_sub.add_argument('--spoligotype_annotations',default="spoligotype_list.csv") parser_sub.add_argument('--barcode',default="barcode.bed",type=str,help='A bed file containing lineage barcode SNPs') parser_sub.add_argument('--bedmask',default="mask.bed",type=str,help='A bed file containing a list of low-complexity regions') -parser_sub.add_argument('--rules',type=str,help='A file containing python rules') +parser_sub.add_argument('--rules',type=str,default="rules.txt",help='A file containing python rules') parser_sub.add_argument('--amplicon_primers',type=str,help='A file containing a list of amplicon primers') parser_sub.add_argument('--match_ref',type=str,help='The prefix for all output files') parser_sub.add_argument('--custom',action="store_true",help='Tells the script this is a custom database, this is used to alter the generation of the version definition') diff --git a/tbprofiler/utils.py b/tbprofiler/utils.py index 3a6acaf..dca4d7a 100644 --- a/tbprofiler/utils.py +++ b/tbprofiler/utils.py @@ -96,7 +96,6 @@ def reformat_variant_csv_file(files: list, outfile: str) -> str: return outfile def check_db_version(db_version: str, tbprofiler_version: str) -> None: - print(db_version) for d in db_version.split(","): r = re.search('([<>=]+)(.*)',d) if r==None: From a0ec34df350b575ae82aabee34d2898584b3f8a2 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 14:33:39 +0000 Subject: [PATCH 52/53] update db --- db/{who-v2.barcode.bed => tbdb.barcode.bed} | 10 +++ db/tbdb.bed | 73 +++++++++++++++++++ db/tbdb.dict | 2 + db/tbdb.dr.json | 1 + db/{who-v2.fasta => tbdb.fasta} | 0 db/{who-v2.fasta.fai => tbdb.fasta.fai} | 0 db/{who-v2.gff => tbdb.gff} | 0 db/{who-v2.mask.bed => tbdb.mask.bed} | 0 db/{who-v2.rules.txt => tbdb.rules.txt} | 0 ...ype_list.csv => tbdb.spoligotype_list.csv} | 0 ...acers.txt => tbdb.spoligotype_spacers.txt} | 0 db/tbdb.variables.json | 1 + db/who-v2.bed | 65 ----------------- db/who-v2.dict | 2 - db/who-v2.dr.json | 1 - db/who-v2.variables.json | 40 ---------- 16 files changed, 87 insertions(+), 108 deletions(-) rename db/{who-v2.barcode.bed => tbdb.barcode.bed} (99%) create mode 100644 db/tbdb.bed create mode 100644 db/tbdb.dict create mode 100644 db/tbdb.dr.json rename db/{who-v2.fasta => tbdb.fasta} (100%) rename db/{who-v2.fasta.fai => tbdb.fasta.fai} (100%) rename db/{who-v2.gff => tbdb.gff} (100%) rename db/{who-v2.mask.bed => tbdb.mask.bed} (100%) rename db/{who-v2.rules.txt => tbdb.rules.txt} (100%) rename db/{who-v2.spoligotype_list.csv => tbdb.spoligotype_list.csv} (100%) rename db/{who-v2.spoligotype_spacers.txt => tbdb.spoligotype_spacers.txt} (100%) create mode 100644 db/tbdb.variables.json delete mode 100644 db/who-v2.bed delete mode 100644 db/who-v2.dict delete mode 100644 db/who-v2.dr.json delete mode 100644 db/who-v2.variables.json diff --git a/db/who-v2.barcode.bed b/db/tbdb.barcode.bed similarity index 99% rename from db/who-v2.barcode.bed rename to db/tbdb.barcode.bed index bcbc8ff..624f552 100644 --- a/db/who-v2.barcode.bed +++ b/db/tbdb.barcode.bed @@ -259,6 +259,7 @@ Chromosome 506385 506386 lineage4.4.1.1 C Euro-American S;Orphans None Chromosome 511349 511350 lineage5.3 A West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 514244 514245 lineage4.1.1 T Euro-American (X-type) X1;X2;X3 None Chromosome 522052 522053 lineage2.1 A East-Asian (non-Beijing) None None +Chromosome 526895 526896 M.canetti C M.canetti None None Chromosome 528780 528781 lineage1.2.1.2 A Indo-Oceanic NA RD239 Chromosome 529362 529363 lineage1.1.1 T Indo-Oceanic EAI4;EAI5 RD239 Chromosome 533327 533328 La2 A M.caprae None None @@ -330,6 +331,7 @@ Chromosome 703721 703722 lineage4.1.1.3.1 G Euro-American (X-type) X1;X3 RD193 Chromosome 705061 705062 lineage4.4.1.1 C Euro-American S;Orphans None Chromosome 705569 705570 lineage1.1 T Indo-Oceanic EAI3;EAI4;EAI5;EAI6 RD239 Chromosome 705594 705595 lineage4.3.2 T Euro-American (LAM) LAM3 None +Chromosome 707485 707486 M.canetti C M.canetti None None Chromosome 709492 709493 lineage4.8.3 T Euro-American (mainly T) T1;T2;T3;T5 RD219 Chromosome 709656 709657 lineage5.1.4 C West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 711154 711155 lineage1.1.2 A Indo-Oceanic EAI3;EAI5 RD239 @@ -352,6 +354,7 @@ Chromosome 748922 748923 lineage4.8.3 T Euro-American (mainly T) T1;T2;T3;T5 RD2 Chromosome 753087 753088 lineage4.4 T Euro-American S;T None Chromosome 756567 756568 lineage6.2 A West-Africa 2 AFRI_1 RD702 Chromosome 758121 758122 lineage4.6.3 T Euro-American T;LAM None +Chromosome 764151 764152 M.canetti T M.canetti None None Chromosome 771653 771654 lineage5.3 G West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 771722 771723 lineage6.3.2 A West-Africa 2 AFRI_1 RD702 Chromosome 772739 772740 La1.7 T M.bovis None None @@ -609,6 +612,7 @@ Chromosome 1560776 1560777 lineage5.1.3 A West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 1560911 1560912 lineage1 A Indo-Oceanic EAI RD239 Chromosome 1561244 1561245 lineage7 T Lineage 7 None None Chromosome 1564798 1564799 lineage4.1.3 T Euro-American T;X;H None +Chromosome 1565424 1565425 M.canetti A M.canetti None None Chromosome 1565565 1565566 lineage2.2.2 T East-Asian (Beijing) Beijing-RD105/RD207 RD105;RD207 Chromosome 1567984 1567985 lineage1.2.1.2 G Indo-Oceanic NA RD239 Chromosome 1568017 1568018 lineage4.2 T Euro-American H;T;LAM None @@ -725,6 +729,7 @@ Chromosome 2024412 2024413 lineage6.3.1 T West-Africa 2 AFRI_1 RD702 Chromosome 2027616 2027617 La1.2.BCG A M.bovis BCG None Chromosome 2033747 2033748 lineage4.6.1 C Euro-American (Uganda) T2 RD724 Chromosome 2033889 2033890 lineage4.4.1 T Euro-American (S-type) S;T None +Chromosome 2043079 2043080 M.canetti G M.canetti None None Chromosome 2053681 2053682 lineage4.3 T Euro-American (LAM) mainly-LAM None Chromosome 2054804 2054805 lineage4.1.1.3 A Euro-American (X-type) X1;X3 RD193 Chromosome 2058446 2058447 lineage4.6.1.2 A Euro-American T2 RD724 @@ -933,6 +938,7 @@ Chromosome 3147315 3147316 lineage1.2.2.2 A Indo-Oceanic NA RD239 Chromosome 3147375 3147376 lineage4.4.1 A Euro-American (S-type) S;T None Chromosome 3147510 3147511 lineage2.2.2 G East-Asian (Beijing) Beijing-RD105/RD207 RD105;RD207 Chromosome 3147741 3147742 lineage4.1.2 G Euro-American T;H None +Chromosome 3148166 3148167 M.canetti G M.canetti None None Chromosome 3153182 3153183 lineage6.3 G West-Africa 2 AFRI_1 RD702 Chromosome 3168966 3168967 lineage4.8 A Euro-American (mainly T) T1;T2;T3;T5 RD219 Chromosome 3170459 3170460 lineage4.6 T Euro-American T;LAM None @@ -950,6 +956,7 @@ Chromosome 3253570 3253571 lineage4.1.1.3.1 T Euro-American (X-type) X1;X3 RD193 Chromosome 3259271 3259272 lineage4.2.2.1 C Euro-American LAM7-TUR None Chromosome 3270288 3270289 lineage4.7 A Euro-American (mainly T) T1;T5 None Chromosome 3285944 3285945 lineage4.3.4.1 G Euro-American (LAM) LAM1;LAM2 RD174 +Chromosome 3287787 3287788 M.canetti G M.canetti None None Chromosome 3293314 3293315 lineage4.6.2.1 T Euro-American T3 RD726 Chromosome 3323664 3323665 lineage1.2.2.1 A Indo-Oceanic NA RD239 Chromosome 3332625 3332626 lineage4.6.1.2 T Euro-American T2 RD724 @@ -963,6 +970,7 @@ Chromosome 3354624 3354625 lineage4.6.2.2 A Euro-American (Cameroon) LAM10-CAM R Chromosome 3360031 3360032 lineage4.3.1.1 A Euro-American (LAM) LAM9 None Chromosome 3360151 3360152 lineage4.6.2.2 A Euro-American (Cameroon) LAM10-CAM RD726 Chromosome 3363400 3363401 lineage6.3.3 A West-Africa 2 AFRI_1 RD702 +Chromosome 3367416 3367417 M.canetti A M.canetti None None Chromosome 3367764 3367765 lineage4.9 G Euro-American (H37Rv-like) T1 None Chromosome 3368283 3368284 lineage5.1.1 T West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 3368414 3368415 lineage6.2.2 A West-Africa 2 AFRI_1 RD702 @@ -1027,6 +1035,7 @@ Chromosome 3886877 3886878 lineage4.4.2 C Euro-American T1;T2 None Chromosome 3893138 3893139 lineage5.1.4 A West-Africa 1 AFRI_2;AFRI_3 RD711 Chromosome 3918066 3918067 lineage6.1.1 C West-Africa 2 AFRI_1 RD702 Chromosome 3955403 3955404 lineage6.1.1 A West-Africa 2 AFRI_1 RD702 +Chromosome 4000017 4000018 M.canetti G M.canetti None None Chromosome 4001040 4001041 lineage6.2.1 A West-Africa 2 AFRI_1 RD702 Chromosome 4004035 4004036 lineage4.4 T Euro-American S;T None Chromosome 4024367 4024368 lineage1.2.1.2 T Indo-Oceanic NA RD239 @@ -1063,6 +1072,7 @@ Chromosome 4200992 4200993 lineage1.2.2.2 G Indo-Oceanic NA RD239 Chromosome 4204695 4204696 La1.8.2 A M.bovis None None Chromosome 4228100 4228101 lineage4.1.3 T Euro-American T;X;H None Chromosome 4229086 4229087 lineage4.1.1.3 T Euro-American (X-type) X1;X3 RD193 +Chromosome 4231381 4231382 M.canetti G M.canetti None None Chromosome 4236890 4236891 lineage6 A West-Africa 2 AFRI_1 RD702 Chromosome 4236902 4236903 lineage4.6.4 A Euro-American T;LAM None Chromosome 4237382 4237383 lineage1.2.1.2 A Indo-Oceanic NA RD239 diff --git a/db/tbdb.bed b/db/tbdb.bed new file mode 100644 index 0000000..1797ff4 --- /dev/null +++ b/db/tbdb.bed @@ -0,0 +1,73 @@ +Chromosome 1 1524 Rv0001 dnaA isoniazid +Chromosome 4933 7267 Rv0005 gyrB levofloxacin,moxifloxacin +Chromosome 7068 9818 Rv0006 gyrA levofloxacin,moxifloxacin +Chromosome 13133 13911 Rv0010c Rv0010c isoniazid +Chromosome 490545 491793 Rv0407 fgd1 clofazimine,pretomanid,delamanid +Chromosome 574479 576790 Rv0486 mshA ethionamide,isoniazid +Chromosome 619500 620865 Rv0529 ccsA capreomycin,amikacin,kanamycin +Chromosome 656010 657739 Rv0565c Rv0565c ethionamide +Chromosome 731680 732406 Rv0635 hadA isoniazid +Chromosome 733853 734970 Rv0639 nusG rifampicin +Chromosome 759342 763325 Rv0667 rpoB rifampicin +Chromosome 763127 767320 Rv0668 rpoC rifampicin +Chromosome 775586 778680 Rv0676c mmpL5 clofazimine,bedaquiline +Chromosome 778477 779624 Rv0677c mmpS5 clofazimine,bedaquiline +Chromosome 778790 779487 Rv0678 mmpR5 clofazimine,bedaquiline +Chromosome 781126 781934 Rv0682 rpsL streptomycin +Chromosome 800106 801462 Rv0701 rplC linezolid +Chromosome 1253074 1254783 Rv1129c Rv1129c moxifloxacin,levofloxacin,rifampicin,isoniazid +Chromosome 1302606 1305501 Rv1173 fbiC clofazimine,pretomanid,delamanid +Chromosome 1364162 1365186 Rv1221 sigE pyrazinamide +Chromosome 1406081 1407604 Rv1258c Rv1258c streptomycin,isoniazid,pyrazinamide +Chromosome 1416181 1418048 Rv1267c embR ethambutol +Chromosome 1460802 1461290 Rv1305 atpE bedaquiline +Chromosome 1471498 1473382 EBG00000313325 rrs streptomycin,kanamycin,capreomycin,amikacin +Chromosome 1473408 1476795 EBG00000313339 rrl capreomycin,linezolid +Chromosome 1673148 1674183 Rv1483 fabG1 ethionamide,isoniazid +Chromosome 1673189 1675011 Rv1484 inhA ethionamide,isoniazid +Chromosome 1833247 1834987 Rv1630 rpsA pyrazinamide +Chromosome 1853358 1854388 Rv1644 tsnR linezolid +Chromosome 1917506 1918746 Rv1694 tlyA capreomycin +Chromosome 2062809 2065010 Rv1819c bacA streptomycin,kanamycin,capreomycin,amikacin +Chromosome 2101651 2103337 Rv1854c ndh ethionamide,delamanid,isoniazid +Chromosome 2153889 2156842 Rv1908c katG isoniazid +Chromosome 2167649 2170934 Rv1918c PPE35 pyrazinamide +Chromosome 2221719 2223825 Rv1979c Rv1979c clofazimine,bedaquiline +Chromosome 2288681 2290323 Rv2043c pncA pyrazinamide +Chromosome 2517915 2519365 Rv2245 kasA isoniazid +Chromosome 2714124 2715832 Rv2416c eis amikacin,kanamycin +Chromosome 2725899 2726780 Rv2428 ahpC isoniazid +Chromosome 2746135 2747798 Rv2447c folC para-aminosalicylic_acid +Chromosome 2782366 2786169 Rv2477c Rv2477c ethambutol,moxifloxacin,streptomycin,levofloxacin,kanamycin,rifampicin,amikacin +Chromosome 2859300 2860640 Rv2535c pepQ clofazimine,bedaquiline +Chromosome 2986639 2987615 Rv2671 ribD para-aminosalicylic_acid +Chromosome 2995772 2996737 Rv2680 Rv2680 capreomycin +Chromosome 2996539 2998055 Rv2681 Rv2681 capreomycin +Chromosome 3064515 3067372 Rv2752c Rv2752c ethambutol,moxifloxacin,levofloxacin,rifampicin,isoniazid +Chromosome 3067193 3068161 Rv2754c thyX para-aminosalicylic_acid +Chromosome 3073680 3074671 Rv2764c thyA para-aminosalicylic_acid +Chromosome 3086620 3087935 Rv2780 ald cycloserine +Chromosome 3338868 3339762 Rv2983 fbiD clofazimine,pretomanid,delamanid +Chromosome 3448253 3449991 Rv3083 Rv3083 ethionamide +Chromosome 3568401 3569280 Rv3197A whiB7 streptomycin,amikacin,kanamycin +Chromosome 3611959 3613847 Rv3236c Rv3236c pyrazinamide +Chromosome 3623159 3625110 Rv3244c lpqB bedaquiline,rifampicin +Chromosome 3624910 3626860 Rv3245c mtrB bedaquiline,rifampicin +Chromosome 3626663 3627924 Rv3246c mtrA bedaquiline,rifampicin +Chromosome 3640207 3641538 Rv3261 fbiA clofazimine,pretomanid,delamanid +Chromosome 3641335 3642881 Rv3262 fbiB clofazimine,pretomanid,delamanid +Chromosome 3840194 3841620 Rv3423c alr cycloserine +Chromosome 3877464 3879240 Rv3457c rpoA rifampicin +Chromosome 3986612 3987299 Rv3547 ddn delamanid,pretomanid +Chromosome 4038158 4041013 Rv3596c clpC1 pyrazinamide +Chromosome 4043862 4046428 Rv3601c panD pyrazinamide +Chromosome 4138202 4140002 Rv3696c glpK ethambutol,moxifloxacin,streptomycin,levofloxacin,rifampicin,isoniazid +Chromosome 4237683 4243147 Rv3793 embC ethambutol +Chromosome 4242947 4246517 Rv3794 embA ethambutol +Chromosome 4246314 4249810 Rv3795 embB ethambutol +Chromosome 4266953 4269124 Rv3805c aftB ethambutol +Chromosome 4268925 4270084 Rv3806c ubiA ethambutol +Chromosome 4326004 4330174 Rv3854c ethA ethionamide +Chromosome 4327328 4328199 Rv3855 ethR ethionamide +Chromosome 4338171 4338961 Rv3862c whiB6 capreomycin,amikacin,kanamycin +Chromosome 4407528 4408481 Rv3919c gid streptomycin diff --git a/db/tbdb.dict b/db/tbdb.dict new file mode 100644 index 0000000..651209f --- /dev/null +++ b/db/tbdb.dict @@ -0,0 +1,2 @@ +@HD VN:1.6 +@SQ SN:Chromosome LN:4411532 M5:57b12ff2773c5fd3a0f879972f176e50 UR:file:/Users/jody/github/TBProfiler/db/tbdb.fasta diff --git a/db/tbdb.dr.json b/db/tbdb.dr.json new file mode 100644 index 0000000..8e63877 --- /dev/null +++ b/db/tbdb.dr.json @@ -0,0 +1 @@ +{"Rv1819c": {"c.102G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2064627], "chromosome": "Chromosome"}, "c.1044G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2063685], "chromosome": "Chromosome"}, "c.105C>G": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.105C>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2064624], "chromosome": "Chromosome"}, "c.1065T>G": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1065T>G", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2063664], "chromosome": "Chromosome"}, "c.1080G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1080G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2063649], "chromosome": "Chromosome"}, "c.1140G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1140G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2063589], "chromosome": "Chromosome"}, "c.1170G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1170G>A", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}], "genome_positions": [2063559], "chromosome": "Chromosome"}, "c.1194C>T": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1194C>T", "confidence": "Not assoc w R - Interim", "source": "WHO catalogue v2", 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"confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3086949], "chromosome": "Chromosome"}, "c.134_135dupTC": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "c.134_135dupTC", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3086953, 3086954], "chromosome": "Chromosome"}, "c.133delA": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "c.133delA", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3086952], "chromosome": "Chromosome"}, "c.839_843dupCGACC": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "c.839_843dupCGACC", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3087658, 3087659, 3087660, 3087661, 3087662], "chromosome": "Chromosome"}, "c.317_318insT": {"annotations": 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"chromosome": "Chromosome"}}, "Rv2671": {"p.Gly8Arg": {"annotations": [{"type": "drug_resistance", "drug": "para-aminosalicylic_acid", "original_mutation": "p.Gly8Arg", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [2986860, 2986861, 2986862], "chromosome": "Chromosome"}}, "Rv3423c": {"p.Met343Thr": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "p.Met343Thr", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3840394, 3840393, 3840392], "chromosome": "Chromosome"}, "p.Leu113Arg": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "p.Leu113Arg", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3841084, 3841083, 3841082], "chromosome": "Chromosome"}, "p.Phe4Leu": {"annotations": [{"type": "drug_resistance", "drug": "cycloserine", "original_mutation": "p.Phe4Leu", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3841411, 3841410, 3841409], "chromosome": "Chromosome"}}, "Rv2754c": {"c.-16C>T": {"annotations": [{"type": "drug_resistance", "drug": "para-aminosalicylic_acid", "original_mutation": "c.-16C>T", "confidence": "", "source": "tbdb", "comment": "Mutation from literature"}], "genome_positions": [3067961], "chromosome": "Chromosome"}}} \ No newline at end of file diff --git a/db/who-v2.fasta b/db/tbdb.fasta similarity index 100% rename from db/who-v2.fasta rename to db/tbdb.fasta diff --git a/db/who-v2.fasta.fai b/db/tbdb.fasta.fai similarity index 100% rename from db/who-v2.fasta.fai rename to db/tbdb.fasta.fai diff --git a/db/who-v2.gff b/db/tbdb.gff similarity index 100% rename from db/who-v2.gff rename to db/tbdb.gff diff --git a/db/who-v2.mask.bed b/db/tbdb.mask.bed similarity index 100% rename from db/who-v2.mask.bed rename to db/tbdb.mask.bed diff --git a/db/who-v2.rules.txt b/db/tbdb.rules.txt similarity index 100% rename from db/who-v2.rules.txt rename to db/tbdb.rules.txt diff --git a/db/who-v2.spoligotype_list.csv b/db/tbdb.spoligotype_list.csv similarity index 100% rename from db/who-v2.spoligotype_list.csv rename to db/tbdb.spoligotype_list.csv diff --git a/db/who-v2.spoligotype_spacers.txt b/db/tbdb.spoligotype_spacers.txt similarity index 100% rename from db/who-v2.spoligotype_spacers.txt rename to db/tbdb.spoligotype_spacers.txt diff --git a/db/tbdb.variables.json b/db/tbdb.variables.json new file mode 100644 index 0000000..fed722a --- /dev/null +++ b/db/tbdb.variables.json @@ -0,0 +1 @@ +{"snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "moxifloxacin", "levofloxacin", "bedaquiline", "delamanid", "pretomanid", "linezolid", "streptomycin", "amikacin", "kanamycin", "capreomycin", "clofazimine", "ethionamide", "para-aminosalicylic_acid", "cycloserine"], "tb-profiler-version": 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619500 620865 Rv0529 ccsA kanamycin,amikacin,capreomycin -Chromosome 656010 657739 Rv0565c Rv0565c ethionamide -Chromosome 731680 732406 Rv0635 hadA isoniazid -Chromosome 733853 734970 Rv0639 nusG rifampicin -Chromosome 759342 763325 Rv0667 rpoB rifampicin -Chromosome 763127 767320 Rv0668 rpoC rifampicin -Chromosome 775586 778680 Rv0676c mmpL5 clofazimine,bedaquiline -Chromosome 778477 779624 Rv0677c mmpS5 clofazimine,bedaquiline -Chromosome 778790 779487 Rv0678 mmpR5 clofazimine,bedaquiline -Chromosome 781126 781934 Rv0682 rpsL streptomycin -Chromosome 800106 801462 Rv0701 rplC linezolid -Chromosome 1253074 1254783 Rv1129c Rv1129c rifampicin,levofloxacin,moxifloxacin,isoniazid -Chromosome 1302606 1305501 Rv1173 fbiC clofazimine,delamanid -Chromosome 1364162 1365186 Rv1221 sigE pyrazinamide -Chromosome 1406081 1407604 Rv1258c Rv1258c streptomycin,isoniazid,pyrazinamide -Chromosome 1416181 1418048 Rv1267c embR ethambutol -Chromosome 1460802 1461290 Rv1305 atpE bedaquiline -Chromosome 1471498 1473382 EBG00000313325 rrs kanamycin,amikacin,capreomycin,streptomycin -Chromosome 1473408 1476795 EBG00000313339 rrl linezolid,capreomycin -Chromosome 1673189 1675011 Rv1484 inhA isoniazid,ethionamide -Chromosome 1833247 1834987 Rv1630 rpsA pyrazinamide -Chromosome 1853358 1854388 Rv1644 tsnR linezolid -Chromosome 1917506 1918746 Rv1694 tlyA capreomycin -Chromosome 2062809 2065010 Rv1819c bacA kanamycin,amikacin,capreomycin,streptomycin -Chromosome 2101651 2103337 Rv1854c ndh ethionamide,isoniazid,delamanid -Chromosome 2153889 2156842 Rv1908c katG isoniazid -Chromosome 2167649 2170934 Rv1918c PPE35 pyrazinamide -Chromosome 2221719 2223825 Rv1979c Rv1979c clofazimine,bedaquiline -Chromosome 2288681 2289480 Rv2043c pncA pyrazinamide -Chromosome 2714124 2715832 Rv2416c eis kanamycin,amikacin -Chromosome 2725899 2726780 Rv2428 ahpC isoniazid -Chromosome 2782366 2786169 Rv2477c Rv2477c rifampicin,ethambutol,streptomycin,kanamycin,amikacin,moxifloxacin,levofloxacin -Chromosome 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4043862 4046428 Rv3601c panD pyrazinamide -Chromosome 4138202 4140002 Rv3696c glpK rifampicin,ethambutol,streptomycin,isoniazid,moxifloxacin,levofloxacin -Chromosome 4237683 4243147 Rv3793 embC ethambutol -Chromosome 4242947 4246517 Rv3794 embA ethambutol -Chromosome 4246314 4249810 Rv3795 embB ethambutol -Chromosome 4266953 4269124 Rv3805c aftB ethambutol -Chromosome 4268925 4270084 Rv3806c ubiA ethambutol -Chromosome 4326004 4327723 Rv3854c ethA ethionamide -Chromosome 4327328 4328199 Rv3855 ethR ethionamide -Chromosome 4338171 4338961 Rv3862c whiB6 kanamycin,amikacin,capreomycin -Chromosome 4407528 4408481 Rv3919c gid streptomycin diff --git a/db/who-v2.dict b/db/who-v2.dict deleted file mode 100644 index 6919b88..0000000 --- a/db/who-v2.dict +++ /dev/null @@ -1,2 +0,0 @@ -@HD VN:1.0 SO:unsorted -@SQ SN:Chromosome LN:4411532 M5:57b12ff2773c5fd3a0f879972f176e50 UR:file:///Users/jody/mambaforge/envs/pp/share/tbprofiler/whov2.fasta diff --git a/db/who-v2.dr.json b/db/who-v2.dr.json deleted file mode 100644 index acfe185..0000000 --- a/db/who-v2.dr.json +++ /dev/null @@ -1 +0,0 @@ -{"Rv1819c": {"c.102G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.102G>A", "confidence": "Not assoc w R - Interim", "comment": ""}], "genome_positions": [2064627], "chromosome": "Chromosome"}, "c.1044G>A": {"annotations": [{"type": "who_confidence", "drug": "amikacin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "comment": ""}, {"type": "who_confidence", "drug": "capreomycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R", "comment": ""}, {"type": "who_confidence", "drug": "kanamycin", "original_mutation": "c.1044G>A", "confidence": "Not assoc w R - Interim", "comment": ""}, {"type": "who_confidence", "drug": "streptomycin", "original_mutation": "c.1044G>A", 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Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779389, 779390, 779391], "chromosome": "Chromosome"}, "p.Arg135Trp": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Arg135Trp", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779392, 779393, 779394], "chromosome": "Chromosome"}, "p.Arg156fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Arg156fs", "confidence": "Assoc w R - Interim", "comment": "Includes data from one site that only submitted resistant strains, which may have inflated the PPV. 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Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Cys46fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779125, 779126, 779127], "chromosome": "Chromosome"}, "p.Cys46Gly": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Cys46Gly", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Cys46Gly", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779125, 779126, 779127], "chromosome": "Chromosome"}, "p.Cys46Trp": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Cys46Trp", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779125, 779126, 779127], "chromosome": "Chromosome"}, "p.Cys46Tyr": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Cys46Tyr", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Cys46Tyr", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779125, 779126, 779127], "chromosome": "Chromosome"}, "p.Gln115Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln115Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779332, 779333, 779334], "chromosome": "Chromosome"}, "p.Gln115*": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln115*", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Gln115*", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779332, 779333, 779334], "chromosome": "Chromosome"}, "p.Gln159fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln159fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779464, 779465, 779466], "chromosome": "Chromosome"}, "p.Gln22Arg": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln22Arg", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln22Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779053, 779054, 779055], "chromosome": "Chromosome"}, "p.Gln22Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln22Pro", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln22Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779053, 779054, 779055], "chromosome": "Chromosome"}, "p.Gln22*": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln22*", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Gln22*", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779053, 779054, 779055], "chromosome": "Chromosome"}, "p.Gln51Arg": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln51Arg", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln51Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln51fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln51fs", "confidence": "Assoc w R - Interim", "comment": "Includes data from one site that only submitted resistant strains, which may have inflated the PPV. Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln51Lys": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln51Lys", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln51Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln51Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln51Pro", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln51Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779140, 779141, 779142], "chromosome": "Chromosome"}, "p.Gln76Arg": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Arg", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln76Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76Glu": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Glu", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Gln76Glu", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76Lys": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Gln76Lys", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779215, 779216, 779217], "chromosome": "Chromosome"}, "p.Gln76*": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Gln76*", "confidence": "Assoc w R - 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Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Ile67Ser", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779188, 779189, 779190], "chromosome": "Chromosome"}, "p.Ile80fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Ile80fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Ile80fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779227, 779228, 779229], "chromosome": "Chromosome"}, "p.Ile80Met": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Ile80Met", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Ile80Met", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779227, 779228, 779229], "chromosome": "Chromosome"}, "p.Ile80Ser": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Ile80Ser", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Ile80Ser", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779227, 779228, 779229], "chromosome": "Chromosome"}, "p.Leu117Arg": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Leu117Arg", "confidence": "Assoc w R", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Leu117Arg", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779338, 779339, 779340], "chromosome": "Chromosome"}, "p.Leu117fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Leu117fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779338, 779339, 779340], "chromosome": "Chromosome"}, "p.Leu117Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Leu117Pro", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Leu117Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779338, 779339, 779340], "chromosome": "Chromosome"}, "p.Leu122Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Leu122Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779353, 779354, 779355], "chromosome": "Chromosome"}, "p.Leu125fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Leu125fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}, {"type": "drug_resistance", "drug": "clofazimine", "original_mutation": "p.Leu125fs", "confidence": "Assoc w R - Interim", "comment": "Can only confer resistance if genetically linked to a functional MmpL5"}], "genome_positions": [779362, 779363, 779364], "chromosome": "Chromosome"}, "p.Leu136Pro": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Leu136Pro", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779395, 779396, 779397], "chromosome": "Chromosome"}, "p.Leu142Arg": {"annotations": [{"type": "who_confidence", "drug": "bedaquiline", "original_mutation": "p.Leu142Arg", "confidence": "Uncertain significance", "comment": ""}, {"type": "who_confidence", "drug": "clofazimine", "original_mutation": "p.Leu142Arg", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [779413, 779414, 779415], "chromosome": "Chromosome"}, "p.Leu142fs": {"annotations": [{"type": "drug_resistance", "drug": "bedaquiline", "original_mutation": "p.Leu142fs", "confidence": "Assoc w R - Interim", "comment": "Includes data from one site that only submitted resistant strains, which may have inflated the PPV. 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"p.Val63Ile", "confidence": "Uncertain significance", "comment": ""}], "genome_positions": [781746, 781747, 781748], "chromosome": "Chromosome"}}} \ No newline at end of file diff --git a/db/who-v2.variables.json b/db/who-v2.variables.json deleted file mode 100644 index 9eea379..0000000 --- a/db/who-v2.variables.json +++ /dev/null @@ -1,40 +0,0 @@ -{ - "snpEff_db": "Mycobacterium_tuberculosis_h37rv", - "drugs": [ - "rifampicin", - "isoniazid", - "ethambutol", - "pyrazinamide", - "moxifloxacin", - "levofloxacin", - "bedaquiline", - "delamanid", - "linezolid", - "streptomycin", - "amikacin", - "kanamycin", - "capreomycin", - "clofazimine", - "ethionamide" - ], - "min-tb-profiler-version": "4.4.0", - "version": { - "name": "who-v2", - "commit": "6aed5d9", - "Author": "Jody Phelan ", - "Date": "Tue Jan 30 14:21:48 2024 +0000" - }, - "amplicon": false, - "files": { - "ref": "who-v2.fasta", - "gff": "who-v2.gff", - "bed": "who-v2.bed", - "json_db": "who-v2.dr.json", - "variables": "who-v2.variables.json", - "spoligotype_spacers": "who-v2.spoligotype_spacers.txt", - "spoligotype_annotations": "who-v2.spoligotype_list.csv", - "bedmask": "who-v2.mask.bed", - "barcode": "who-v2.barcode.bed", - "rules": "who-v2.rules.txt" - } - } \ No newline at end of file From d10739f0a723cfc202f4ac9d3acb4d62412a2a39 Mon Sep 17 00:00:00 2001 From: Jody Phelan Date: Sun, 17 Mar 2024 14:39:29 +0000 Subject: [PATCH 53/53] bug --- scripts/tb-profiler-tools | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/scripts/tb-profiler-tools b/scripts/tb-profiler-tools index dc9c4c3..06abe5a 100644 --- a/scripts/tb-profiler-tools +++ b/scripts/tb-profiler-tools @@ -58,7 +58,8 @@ if hasattr(args, 'func'): args.dir = os.path.abspath(args.dir) if hasattr(args, 'db'): if args.db=="who-v2" and not args.external_db and pp.nofile(sys.base_prefix+"/share/tbprofiler/who-v2.fasta"): - pp.errlog("Can't find the tbdb file at %s. Please run 'tb-profiler update_tbdb' to load the default library or specify another using the '--external_db' flag" % sys.base_prefix,ext=True) + logging.error("Can't find the tbdb file at %s. Please run 'tb-profiler update_tbdb' to load the default library or specify another using the '--external_db' flag" % sys.base_prefix) + quit() if args.external_db: args.conf = pp.get_db(args.software_name,args.external_db) else: