From 69370f6c35cb0b6a7745a137bca7d76b409a62c1 Mon Sep 17 00:00:00 2001 From: Adam Date: Tue, 6 Nov 2018 13:59:33 -0500 Subject: [PATCH] (bug/functions/transformations): fix union to be compatible with heterogeneous table types (#246) * (bug/functions/transformations): fix union to be compatible with heterogeneous table types added LevelColumns to table interface, fixed union and added a batch of tests that came up mid-stream --- execute/table.go | 98 +- .../testdata/join_across_measurements.flux | 12 + .../testdata/join_across_measurements.in.csv | 1093 +++++++++++++++++ .../testdata/join_across_measurements.out.csv | 11 + .../testdata/show_all_tag_keys.flux | 6 + .../testdata/show_all_tag_keys.in.csv | 1093 +++++++++++++++++ .../testdata/show_all_tag_keys.out.csv | 13 + .../testdata/task_per_line.flux | 6 +- .../testdata/task_per_line.out.csv | 33 + .../testdata/union_heterogeneous.flux | 14 + .../testdata/union_heterogeneous.in.csv | 166 +++ .../testdata/union_heterogeneous.out.csv | 23 + functions/transformations/union.go | 13 +- 13 files changed, 2568 insertions(+), 13 deletions(-) create mode 100644 functions/transformations/testdata/join_across_measurements.flux create mode 100644 functions/transformations/testdata/join_across_measurements.in.csv create mode 100644 functions/transformations/testdata/join_across_measurements.out.csv create mode 100644 functions/transformations/testdata/show_all_tag_keys.flux create mode 100644 functions/transformations/testdata/show_all_tag_keys.in.csv create mode 100644 functions/transformations/testdata/show_all_tag_keys.out.csv create mode 100644 functions/transformations/testdata/task_per_line.out.csv create mode 100644 functions/transformations/testdata/union_heterogeneous.flux create mode 100644 functions/transformations/testdata/union_heterogeneous.in.csv create mode 100644 functions/transformations/testdata/union_heterogeneous.out.csv diff --git a/execute/table.go b/execute/table.go index 3487e17e45..a4d0fd7752 100644 --- a/execute/table.go +++ b/execute/table.go @@ -131,9 +131,13 @@ func AppendMappedTable(t flux.Table, builder TableBuilder, colMap []int) error { return nil } - return t.Do(func(cr flux.ColReader) error { + if err := t.Do(func(cr flux.ColReader) error { return AppendMappedCols(cr, builder, colMap) - }) + }); err != nil { + return err + } + + return builder.LevelColumns() } // AppendTable appends data from table t onto builder. @@ -151,9 +155,14 @@ func AppendTable(t flux.Table, builder TableBuilder) error { // AppendMappedCols appends all columns from cr onto builder. // The colMap is a map of builder column index to cr column index. func AppendMappedCols(cr flux.ColReader, builder TableBuilder, colMap []int) error { + if len(colMap) != len(builder.Cols()) { + return errors.New("AppendMappedCols: colMap must have an entry for each table builder column") + } for j := range builder.Cols() { - if err := AppendCol(j, colMap[j], cr, builder); err != nil { - return err + if colMap[j] >= 0 { + if err := AppendCol(j, colMap[j], cr, builder); err != nil { + return err + } } } return nil @@ -460,6 +469,10 @@ type TableBuilder interface { GrowStrings(j, n int) error GrowTimes(j, n int) error + // LevelColumns will check for columns that are too short and Grow them + // so that each column is of uniform size. + LevelColumns() error + // Sort the rows of the by the values of the columns in the order listed. Sort(cols []string, desc bool) @@ -582,6 +595,83 @@ func (b ColListTableBuilder) AddCol(c flux.ColMeta) (int, error) { return newIdx, nil } +func (b ColListTableBuilder) LevelColumns() error { + + for idx, c := range b.table.colMeta { + switch c.Type { + case flux.TBool: + toGrow := b.NRows() - len(b.table.Bools(idx)) + if toGrow > 0 { + if err := b.GrowBools(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + case flux.TInt: + toGrow := b.NRows() - len(b.table.Ints(idx)) + if toGrow > 0 { + if err := b.GrowInts(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + case flux.TUInt: + toGrow := b.NRows() - len(b.table.UInts(idx)) + if toGrow > 0 { + if err := b.GrowUInts(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + case flux.TFloat: + toGrow := b.NRows() - len(b.table.Floats(idx)) + if toGrow > 0 { + if err := b.GrowFloats(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + case flux.TString: + toGrow := b.NRows() - len(b.table.Strings(idx)) + if toGrow > 0 { + if err := b.GrowStrings(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + case flux.TTime: + toGrow := b.NRows() - len(b.table.Times(idx)) + if toGrow > 0 { + if err := b.GrowTimes(idx, toGrow); err != nil { + return err + } + } + + if toGrow < 0 { + _ = fmt.Errorf("column %s is longer than expected length of table", c.Label) + } + default: + PanicUnknownType(c.Type) + } + } + return nil +} + func (b ColListTableBuilder) SetBool(i int, j int, value bool) error { if err := b.checkCol(j, flux.TBool); err != nil { return err diff --git a/functions/transformations/testdata/join_across_measurements.flux b/functions/transformations/testdata/join_across_measurements.flux new file mode 100644 index 0000000000..d8a44afb12 --- /dev/null +++ b/functions/transformations/testdata/join_across_measurements.flux @@ -0,0 +1,12 @@ +memUsed = from(bucket: "telegraf/autogen") + |> range(start:2018-05-22T19:53:00Z, stop:2018-05-22T19:55:00Z) + |> filter(fn: (r) => r._measurement == "mem" AND r._field == "used" ) + +procTotal = from(bucket: "telegraf/autogen") + |> range(start:2018-05-22T19:53:00Z, stop:2018-05-22T19:55:00Z) + |> filter(fn: (r) => + r._measurement == "processes" AND + r._field == "total" + ) + +join(tables: {mem:memUsed, proc:procTotal}, on: ["_time", "_stop", "_start", "host"]) |> yield() \ No newline at end of file diff --git a/functions/transformations/testdata/join_across_measurements.in.csv b/functions/transformations/testdata/join_across_measurements.in.csv new file mode 100644 index 0000000000..915b062ddc --- /dev/null +++ b/functions/transformations/testdata/join_across_measurements.in.csv @@ -0,0 +1,1093 @@ +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,double,string,string,string,string +#group,false,false,false,false,false,false,true,true,true,true +#default,_result,,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,cpu,host +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,usage_guest,cpu,cpu-total,host.local 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+,,158,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,out,swap,host.local +,,158,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,out,swap,host.local +,,158,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,out,swap,host.local +,,159,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,8589934592,total,swap,host.local +,,159,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,8589934592,total,swap,host.local +,,159,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,8589934592,total,swap,host.local +,,159,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,8589934592,total,swap,host.local +,,159,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,8589934592,total,swap,host.local 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+,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,1320630,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,1320640,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,1320650,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,1320660,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,1320670,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,1320680,uptime,system,host.local + +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,string,string,string,string +#group,false,false,false,false,false,false,true,true,true +#default,_result,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,host +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,"15 days, 6:51",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,"15 days, 6:51",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,"15 days, 6:51",uptime_format,system,host.local \ No newline at end of file diff --git a/functions/transformations/testdata/join_across_measurements.out.csv b/functions/transformations/testdata/join_across_measurements.out.csv new file mode 100644 index 0000000000..dc78a54439 --- /dev/null +++ b/functions/transformations/testdata/join_across_measurements.out.csv @@ -0,0 +1,11 @@ +#datatype,string,long,string,string,string,string,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,long,long,string +#group,false,false,true,true,true,true,false,false,false,false,false,true +#default,_result,,,,,,,,,,, +,result,table,_field_mem,_field_proc,_measurement_mem,_measurement_proc,_start,_stop,_time,_value_mem,_value_proc,host +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,10832478208,417,host.local +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,10774417408,416,host.local +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,10718109696,416,host.local +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,10779672576,418,host.local +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,10785837056,418,host.local +,,0,used,total,mem,processes,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,10731827200,417,host.local + diff --git a/functions/transformations/testdata/show_all_tag_keys.flux b/functions/transformations/testdata/show_all_tag_keys.flux new file mode 100644 index 0000000000..050c623ae3 --- /dev/null +++ b/functions/transformations/testdata/show_all_tag_keys.flux @@ -0,0 +1,6 @@ +from(bucket:"telegraf") + |> range(start:2018-05-22T19:53:26Z) + |> keys(except: ["_time","_value","_start","_stop"]) + |> group(none: true) + |> distinct() + |> map(fn:(r) => r._value) \ No newline at end of file diff --git a/functions/transformations/testdata/show_all_tag_keys.in.csv b/functions/transformations/testdata/show_all_tag_keys.in.csv new file mode 100644 index 0000000000..915b062ddc --- /dev/null +++ b/functions/transformations/testdata/show_all_tag_keys.in.csv @@ -0,0 +1,1093 @@ +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,double,string,string,string,string +#group,false,false,false,false,false,false,true,true,true,true +#default,_result,,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,cpu,host +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,usage_guest,cpu,cpu-total,host.local +,,0,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,usage_guest,cpu,cpu-total,host.local 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+#group,false,false,false,false,false,false,true,true,true +#default,_result,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,host +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,82.9833984375,used_percent,swap,host.local +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,82.598876953125,used_percent,swap,host.local +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,82.598876953125,used_percent,swap,host.local +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,82.598876953125,used_percent,swap,host.local +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,82.598876953125,used_percent,swap,host.local +,,161,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,82.6416015625,used_percent,swap,host.local 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+,,163,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,1.97,load15,system,host.local +,,163,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,1.96,load15,system,host.local +,,163,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,1.98,load15,system,host.local +,,163,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,1.97,load15,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,1.95,load5,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,1.92,load5,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,1.92,load5,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,1.89,load5,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,1.94,load5,system,host.local +,,164,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,1.93,load5,system,host.local + +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,long,string,string,string +#group,false,false,false,false,false,false,true,true,true +#default,_result,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,host +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,8,n_cpus,system,host.local +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,8,n_cpus,system,host.local +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,8,n_cpus,system,host.local +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,8,n_cpus,system,host.local +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,8,n_cpus,system,host.local +,,165,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,8,n_cpus,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,5,n_users,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,5,n_users,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,5,n_users,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,5,n_users,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,5,n_users,system,host.local +,,166,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,5,n_users,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,1320630,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,1320640,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,1320650,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,1320660,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,1320670,uptime,system,host.local +,,167,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,1320680,uptime,system,host.local + +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,string,string,string,string +#group,false,false,false,false,false,false,true,true,true +#default,_result,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,host +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,"15 days, 6:50",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,"15 days, 6:51",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,"15 days, 6:51",uptime_format,system,host.local +,,168,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,"15 days, 6:51",uptime_format,system,host.local \ No newline at end of file diff --git a/functions/transformations/testdata/show_all_tag_keys.out.csv b/functions/transformations/testdata/show_all_tag_keys.out.csv new file mode 100644 index 0000000000..98344c3f7a --- /dev/null +++ b/functions/transformations/testdata/show_all_tag_keys.out.csv @@ -0,0 +1,13 @@ +#datatype,string,long,string +#group,false,false,false +#default,_result,, +,result,table,_value +,,0,_field +,,0,_measurement +,,0,host +,,0,name +,,0,cpu +,,0,device +,,0,fstype +,,0,path + diff --git a/functions/transformations/testdata/task_per_line.flux b/functions/transformations/testdata/task_per_line.flux index d30669e4c6..6a9dc9843b 100644 --- a/functions/transformations/testdata/task_per_line.flux +++ b/functions/transformations/testdata/task_per_line.flux @@ -1,7 +1,7 @@ supl = from(bucketID: "000000000000000a") |> range(start: 2018-10-02T17:55:11.520461Z) |> filter(fn: (r) => r._measurement == "records" and r.taskID == "02bac3c8f0f37000" ) - |> pivot(rowKey:["_time"], colKey: ["_field"], valueCol: "_value") + |> pivot(rowKey:["_time"], columnKey: ["_field"], valueColumn: "_value") |> group(by: ["runID"]) |> yield(name:"r1") @@ -9,8 +9,8 @@ supl = from(bucketID: "000000000000000a") main = from(bucketID: "000000000000000a") |> range(start: 2018-10-02T17:55:11.520461Z) |> filter(fn: (r) => r._measurement == "records" and r.taskID == "02bac3c8f0f37000" ) - |> pivot(rowKey:["_time"], colKey: ["_field"], valueCol: "_value") - |> pivot(rowKey:["runID"], colKey: ["status"], valueCol: "_time") + |> pivot(rowKey:["_time"], columnKey: ["_field"], valueColumn: "_value") + |> pivot(rowKey:["runID"], columnKey: ["status"], valueColumn: "_time") |> yield(name:"r2") join(tables: {main: main, supl: supl}, on: ["_start", "_stop", "orgID", "taskID", "runID", "_measurement"]) diff --git a/functions/transformations/testdata/task_per_line.out.csv b/functions/transformations/testdata/task_per_line.out.csv new file mode 100644 index 0000000000..94277f9f81 --- /dev/null +++ b/functions/transformations/testdata/task_per_line.out.csv @@ -0,0 +1,33 @@ +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,string,string,string,string,string,string +#group,false,false,false,false,false,false,false,false,false,true,false +#default,r1,,,,,,,,,, +,result,table,_start,_stop,_time,taskID,orgID,status,_measurement,runID,scheduledFor +,,0,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:10.920529Z,02bac3c8f0f37000,02bac3c8d6c5b000,success,records,02bac3c8f1737000,2018-10-03T17:55:11Z + +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,string,string,string,string,string,string,string +#group,false,false,false,false,false,false,false,false,false,false,true,false +#default,r1,,,,,,,,,,, +,result,table,_start,_stop,_time,taskID,orgID,status,_measurement,requestedAt,runID,scheduledFor +,,1,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.01114Z,02bac3c8f0f37000,02bac3c8d6c5b000,started,records,1970-01-01T00:00:01Z,02bac3c908f37000,2018-10-03T17:55:12Z +,,1,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.01435Z,02bac3c8f0f37000,02bac3c8d6c5b000,success,records,,02bac3c908f37000,2018-10-03T17:55:12Z +,,2,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.113222Z,02bac3c8f0f37000,02bac3c8d6c5b000,started,records,,02bac3c922737000,2018-10-03T17:55:13Z +,,2,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.115415Z,02bac3c8f0f37000,02bac3c8d6c5b000,success,records,,02bac3c922737000,2018-10-03T17:55:13Z + +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,string,string,string,string,dateTime:RFC3339,dateTime:RFC3339 +#group,false,false,true,true,true,true,true,false,false,false +#default,r2,,,,,,,,, +,result,table,_start,_stop,taskID,orgID,_measurement,runID,started,success +,,0,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,02bac3c8f0f37000,02bac3c8d6c5b000,records,02bac3c908f37000,2018-10-03T17:55:11.01114Z,2018-10-03T17:55:11.01435Z +,,0,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,02bac3c8f0f37000,02bac3c8d6c5b000,records,02bac3c922737000,2018-10-03T17:55:11.113222Z,2018-10-03T17:55:11.115415Z +,,0,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,02bac3c8f0f37000,02bac3c8d6c5b000,records,02bac3c8f1737000,1970-01-01T00:00:00Z,2018-10-03T17:55:10.920529Z + +#datatype,string,long,string,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,string,string,string,dateTime:RFC3339,string,dateTime:RFC3339,string +#group,false,false,true,true,true,false,true,true,false,false,false,false,true +#default,r3,,,,,,,,,,,, +,result,table,_measurement,_start,_stop,_time,orgID,runID,scheduledFor,started,status,success,taskID +,,0,records,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:10.920529Z,02bac3c8d6c5b000,02bac3c8f1737000,2018-10-03T17:55:11Z,1970-01-01T00:00:00Z,success,2018-10-03T17:55:10.920529Z,02bac3c8f0f37000 +,,1,records,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.01114Z,02bac3c8d6c5b000,02bac3c908f37000,2018-10-03T17:55:12Z,2018-10-03T17:55:11.01114Z,started,2018-10-03T17:55:11.01435Z,02bac3c8f0f37000 +,,1,1970-01-01T00:00:01Z,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.01435Z,02bac3c8d6c5b000,02bac3c908f37000,2018-10-03T17:55:12Z,2018-10-03T17:55:11.01114Z,success,2018-10-03T17:55:11.01435Z,02bac3c8f0f37000 +,,2,records,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.113222Z,02bac3c8d6c5b000,02bac3c922737000,2018-10-03T17:55:13Z,2018-10-03T17:55:11.113222Z,started,2018-10-03T17:55:11.115415Z,02bac3c8f0f37000 +,,2,,2018-10-02T17:55:11.520461Z,2018-10-03T17:55:11.520461Z,2018-10-03T17:55:11.115415Z,02bac3c8d6c5b000,02bac3c922737000,2018-10-03T17:55:13Z,2018-10-03T17:55:11.113222Z,success,2018-10-03T17:55:11.115415Z,02bac3c8f0f37000 + diff --git a/functions/transformations/testdata/union_heterogeneous.flux b/functions/transformations/testdata/union_heterogeneous.flux new file mode 100644 index 0000000000..4deb497e18 --- /dev/null +++ b/functions/transformations/testdata/union_heterogeneous.flux @@ -0,0 +1,14 @@ +left = from(bucket: "test") + |> range(start: 2018-05-22T19:53:00Z, stop: 2018-05-22T19:53:50Z) + |> filter(fn: (r) => r._measurement == "diskio" AND r._field == "io_time") + |> group(by: ["host"]) + |> drop(columns: ["_start", "_stop", "name"]) + +right = from(bucket: "test") + |> range(start: 2018-05-22T19:53:50Z, stop: 2018-05-22T19:54:20Z) + |> filter(fn: (r) => r._measurement == "diskio" AND r._field == "read_bytes") + |> group(by: ["host"]) + |> drop(columns: ["_start", "_stop"]) + +union(tables: [left, right]) + |> sort(columns: ["_time", "_field", "_value"]) diff --git a/functions/transformations/testdata/union_heterogeneous.in.csv b/functions/transformations/testdata/union_heterogeneous.in.csv new file mode 100644 index 0000000000..699b47e8a7 --- /dev/null +++ b/functions/transformations/testdata/union_heterogeneous.in.csv @@ -0,0 +1,166 @@ +#datatype,string,long,dateTime:RFC3339,dateTime:RFC3339,dateTime:RFC3339,long,string,string,string,string +#group,false,false,false,false,false,false,true,true,true,true +#default,_result,,,,,,,,, +,result,table,_start,_stop,_time,_value,_field,_measurement,host,name +,,111,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,15204688,io_time,diskio,host.local,disk0 +,,111,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,15204894,io_time,diskio,host.local,disk0 +,,111,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,15205102,io_time,diskio,host.local,disk0 +,,111,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,15205226,io_time,diskio,host.local,disk0 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+,,129,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,3929,io_time,diskio,host.local,disk3 +,,129,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,3929,io_time,diskio,host.local,disk3 +,,129,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,3929,io_time,diskio,host.local,disk3 +,,129,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,3929,io_time,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,iops_in_progress,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,iops_in_progress,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,iops_in_progress,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,iops_in_progress,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,iops_in_progress,diskio,host.local,disk3 +,,130,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,iops_in_progress,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,24209920,read_bytes,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,24209920,read_bytes,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,24209920,read_bytes,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,24209920,read_bytes,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,24209920,read_bytes,diskio,host.local,disk3 +,,131,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,24209920,read_bytes,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,3929,read_time,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,3929,read_time,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,3929,read_time,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,3929,read_time,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,3929,read_time,diskio,host.local,disk3 +,,132,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,3929,read_time,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,100,reads,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,100,reads,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,100,reads,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,100,reads,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,100,reads,diskio,host.local,disk3 +,,133,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,100,reads,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,weighted_io_time,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,weighted_io_time,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,weighted_io_time,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,weighted_io_time,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,weighted_io_time,diskio,host.local,disk3 +,,134,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,weighted_io_time,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,write_bytes,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,write_bytes,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,write_bytes,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,write_bytes,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,write_bytes,diskio,host.local,disk3 +,,135,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,write_bytes,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,write_time,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,write_time,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,write_time,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,write_time,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,write_time,diskio,host.local,disk3 +,,136,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,write_time,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:26Z,0,writes,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:36Z,0,writes,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:46Z,0,writes,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:53:56Z,0,writes,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:06Z,0,writes,diskio,host.local,disk3 +,,137,2018-05-22T19:53:24.421470485Z,2018-05-22T19:54:24.421470485Z,2018-05-22T19:54:16Z,0,writes,diskio,host.local,disk3 \ No newline at end of file diff --git a/functions/transformations/testdata/union_heterogeneous.out.csv b/functions/transformations/testdata/union_heterogeneous.out.csv new file mode 100644 index 0000000000..b8f8587ad3 --- /dev/null +++ b/functions/transformations/testdata/union_heterogeneous.out.csv @@ -0,0 +1,23 @@ +#datatype,string,long,dateTime:RFC3339,long,string,string,string,string +#group,false,false,false,false,false,false,true,false +#default,_result,,,,,,, +,result,table,_time,_value,_field,_measurement,host,name +,,0,2018-05-22T19:53:26Z,648,io_time,diskio,host.local, +,,0,2018-05-22T19:53:26Z,3929,io_time,diskio,host.local, +,,0,2018-05-22T19:53:26Z,15204688,io_time,diskio,host.local, +,,0,2018-05-22T19:53:36Z,648,io_time,diskio,host.local, +,,0,2018-05-22T19:53:36Z,3929,io_time,diskio,host.local, +,,0,2018-05-22T19:53:36Z,15204894,io_time,diskio,host.local, +,,0,2018-05-22T19:53:46Z,648,io_time,diskio,host.local, +,,0,2018-05-22T19:53:46Z,3929,io_time,diskio,host.local, +,,0,2018-05-22T19:53:46Z,15205102,io_time,diskio,host.local, +,,0,2018-05-22T19:53:56Z,24209920,read_bytes,diskio,host.local,disk3 +,,0,2018-05-22T19:53:56Z,202997248,read_bytes,diskio,host.local,disk2 +,,0,2018-05-22T19:53:56Z,228585836544,read_bytes,diskio,host.local,disk0 +,,0,2018-05-22T19:54:06Z,24209920,read_bytes,diskio,host.local,disk3 +,,0,2018-05-22T19:54:06Z,202997248,read_bytes,diskio,host.local,disk2 +,,0,2018-05-22T19:54:06Z,228594925568,read_bytes,diskio,host.local,disk0 +,,0,2018-05-22T19:54:16Z,24209920,read_bytes,diskio,host.local,disk3 +,,0,2018-05-22T19:54:16Z,202997248,read_bytes,diskio,host.local,disk2 +,,0,2018-05-22T19:54:16Z,228613324800,read_bytes,diskio,host.local,disk0 + diff --git a/functions/transformations/union.go b/functions/transformations/union.go index cb1aa34516..76da710072 100644 --- a/functions/transformations/union.go +++ b/functions/transformations/union.go @@ -123,15 +123,16 @@ func (t *unionTransformation) RetractTable(id execute.DatasetID, key flux.GroupK func (t *unionTransformation) Process(id execute.DatasetID, tbl flux.Table) error { t.mu.Lock() defer t.mu.Unlock() + var colMap = make([]int, 0, len(tbl.Cols())) + var err error + builder, _ := t.cache.TableBuilder(tbl.Key()) - builder, created := t.cache.TableBuilder(tbl.Key()) - if created { - if err := execute.AddTableCols(tbl, builder); err != nil { - return err - } + colMap, err = execute.AddNewTableCols(tbl, builder, colMap) + if err != nil { + return err } - if err := execute.AppendTable(tbl, builder); err != nil { + if err := execute.AppendMappedTable(tbl, builder, colMap); err != nil { return err }