From bb5de7aa0402ffecddb77543be52124b275239df Mon Sep 17 00:00:00 2001 From: GitHub CI Documentation builder Date: Wed, 26 Jun 2024 10:23:23 +0000 Subject: [PATCH] Update docs --- annotated.html | 453 ++++++++-------- annotated.js | 1 + bsl__advection__1d_8hpp_source.html | 309 +++++++++++ classBslAdvection1D-members.html | 121 +++++ classBslAdvection1D.html | 296 +++++++++++ classBslAdvection1D.js | 6 + dir_7e7830f61a7bd274c10f9a89d5b51635.js | 40 +- dir_a0723bd535f2195612463753c5d9b125.js | 1 + dir_e7f7fdb213efe170da06dba4c9873be6.html | 116 ++++ files.html | 419 +++++++-------- navtreedata.js | 28 +- navtreeindex0.js | 292 +++++----- navtreeindex1.js | 500 +++++++++--------- navtreeindex2.js | 500 +++++++++--------- navtreeindex3.js | 500 +++++++++--------- navtreeindex4.js | 184 +++---- navtreeindex5.js | 148 +++--- navtreeindex6.js | 202 +++---- pages.html | 15 +- search/all_1.js | 47 +- search/all_10.js | 20 +- search/all_11.js | 54 +- search/all_12.js | 82 +-- search/all_13.js | 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+118,233 @@  CAnalyticalInvertibleCurvilinear2DToCartesianA class for describing analytical invertible curvilinear 2D mappings from the logical domain to the physical domain  ►CBernsteinPolynomialBasis  CImpl - CBslAdvectionRPDefine an advection operator on 2D \((r, \theta)\) domain - CBslAdvectionSpatialA class which computes the spatial advection along the dimension of interest DDimX - CBslAdvectionVelocityA class which computes the velocity advection along the dimension of interest DDimV - CBslExplicitPredCorrRPA second order explicit predictor-corrector for the Vlasov-Poisson equations - CBslImplicitPredCorrRPA second order implicit predictor-corrector for the Vlasov-Poisson equations - CBslPredCorrRPPredictor-corrector for the Vlasov-Poisson equations - CBSplinesP - CBSplinesR - CBSplinesVp - CBSplinesVr - CBSplinesVx - CBSplinesVy - CBSplinesX - CBSplinesY - CBumpontailEquilibriumA class that initializes the distribution function as a sum of two Maxwellian functions - Ccartesian_product_impl - Ccartesian_product_impl< std::tuple< std::tuple< HeadArgs... >, TailTuples... >, OutTupleOfTuples > - Ccartesian_product_impl< std::tuple<>, OutTupleOfTuples > - CCartesianSolutionDefine a Cartesian solution of the Poisson equation - CCartesianToBarycentricCoordinates - CChargeDensityCalculatorA class which computes charges density with Kokkos - CCircularToCartesianA class for describing the circular 2D mapping - CCollisionsGuardHeader Guard for collision operator - CCollisionsInterClass describing the inter-species collision operator - ►CCollisionsIntraClass describing the intra-species collision operator - CGhostedVxA conditional type representing either a uniform or a non-uniform ghosted vx mesh - CGhostedVxStaggeredA conditional type representing either a uniform or a non-uniform ghosted staggered vx mesh - CCollisionSpVparMuA class which computes the collision operator in (vpar,mu) - CConstantFluidInitializationA class that initializes a fluid species with constant moments - CConstantRateA class that describes a reaction rate that is constant - ►CCosineEvaluator - CEvaluator - CCrankNicolsonA class which provides an implementation of a Crank-Nicolson method - CCurvilinear2DToCartesianA class for describing curvilinear 2D mappings from the logical domain to the physical domain - CCurvilinearSolutionDefine a curvilinear solution of the Poisson equation - CCzarnyToCartesianA class for describing the Czarny 2D mapping - CDecentredRotationAdvectionFieldSimulationSimulation of a decentred rotated elipse-type function - CDecentredRotationSimulationSimulation of a decentred rotated elipse-type function - CDerivField - CDerivField< ElementType, ddc::DiscreteDomain< DDims... >, NDerivs, Allocator >A class which holds a chunk of memory describing a field and its derivatives - CDerivFieldCommon - CDerivFieldCommon< ChunkType, ddc::DiscreteDomain< DDims... > >An abstract class which holds a chunk of memory describing a field and its derivatives - CDerivFieldSpan - CDerivFieldSpan< ElementType, ddc::DiscreteDomain< DDims... >, LayoutStridedPolicy, MemorySpace >A class which holds references to chunks of memory describing a field and its derivatives - CDiffusiveNeutralSolverA class that solves a so-called "pressure-diffusive" fluid neutral model - CDimX_pCTag the first non periodic dimension in the pseudo_Cartesian domain - CDimY_pCTag the second non periodic dimension in the pseudo_Cartesian domain - CDiocotronDensitySolutionThe diocotron exact solution of the density \( \rho \) - CDiscreteSubDomainA class which describes a collection of ddc::DiscreteElements which form a subdomain - CDiscreteSubDomainIteratorAn iterator type for the DiscreteSubDomain - CDiscreteToCartesianA class for describing discrete 2D mappings from the logical domain to the physical domain - CEdgeDefine an edge of a given patch - CEdgeCoordinatesTransformationTransform a coordinate from one edge to a coordinate on the other edge - CElectrostaticalPotentialSimulationBase class for the advection field for the tests of the 2D polar advection operator - CElectrostaticalPotentialSimulation_decentred_rotationAdvection field for the tests of the 2D polar advection operator - CElectrostaticalPotentialSimulation_rotationAdvection field for the tests of the 2D polar advection operator - CElectrostaticalPotentialSimulation_translationAdvection field for the tests of the 2D polar advection operator - CEulerA class which provides an implementation of an explicit Euler method - ►CEvaluator2D - CEvaluator - ►CFemNonPeriodicQNSolverAn operator which solves the Quasi-Neutrality equation using Finite Elements on a non-periodic domain - CQMeshXThe discrete dimension of the quadrature points - ►CFemPeriodicQNSolverAn operator which solves the Quasi-Neutrality equation using Finite Elements on a periodic domain - CQMeshXThe discrete dimension of the quadrature points - CFFTPoissonSolver - ►CFFTPoissonSolver< ddc::DiscreteDomain< DDims... >, FullDomain, ExecSpace, LayoutSpace >A class solve the follwing equation: \( -\Delta \phi = \rho \) using a Fourier transform - CIDimFourier - ►CFluidMomentsA class that computes fluid moments of the distribution function - CMomentDensityA tag type to indicate that the density should be calculated - CMomentTemperatureA tag type to indicate that the temperature should be calculated - CMomentVelocityA tag type to indicate that the velocity should be calculated - Cfor_each_tuple_cat - Cfor_each_tuple_cat< std::tuple< Tuples... >, Tuple > - CFunctionToBeAdvectedBase class for the test functions for the 2D polar advection operator - CFunctionToBeAdvected_cos_4_elipseTest function for the 2D polar advection operator - CFunctionToBeAdvected_gaussianTest function for the 2D polar advection operator - CGaussLegendre - CGaussLegendreCoefficients - CGeometryXVxA class providing aliases for useful subdomains of the geometry - CGeometryXYVxVyA class providing aliases for useful subdomains of the geometry - CGridMu - CGridTor1 - CGridTor2 - CGridTor3 - CGridVpar - CHiddenNUBSplinesX - CIAdvectionRPDefine the base class of 2D advection operators in polar domain - CIAdvectionSpatialA class which provides an advection operator - CIAdvectionVelocityA class which provides an advection operator - CIBoltzmannSolverAn abstract class for solving a Boltzmann equation - CIChargeDensityCalculatorA class which calculates the charge density - CIDimM - CIDimP - CIDimR - CIDimSp - CIDimVp - CIDimVr - CIDimVx - CIDimVy - CIDimX - CIDimY - CIEquilibriumAn abstract class for initializing a distribution function that does not depend on space - CIFluidInitializationAn abstract class that allows for initializing a fluid species - CIFluidSolverAn abstract class for solving a fluid model - CIFootFinderDefine a base class for all the time integration methods used for the advection - CIInitializationAn abstract class that allows for initializing a distribution function - CIInterpolatorA class which provides an interpolating function - CIInterpolatorRPA class which provides an interpolating function - CInterfaceRepresent a simple sticking of two edges - Cinterpolator_on_domain - Cinterpolator_on_domain< Interp, DDimI, ddc::DiscreteDomain< DDim... > >A structure which builds an interpolation type - CIPoissonSolver - CIPoissonSolver< ddc::DiscreteDomain< ODims... >, FullDomain, LayoutSpace, MemorySpace >An abstract class from which a Poisson solver can inherit - CIPreallocatableInterpolatorA class which provides access to an interpolating function which can be preallocated where useful - CIPreallocatableInterpolatorRPA class which provides access to an interpolating function which can be preallocated where useful - CIQNSolverBase class for a Quasi-Neutrality solver - CIReactionRateAn abstract interface representing a reaction rate that depends on temperature and density - CIRightHandSideAn abstract class representing a source in Boltzmann equation - Cis_subdomain_collection - Cis_subdomain_collection< DiscreteSubDomain< Tags... > > - CITimeSolverAn abstract class for solving a Boltzmann-Poisson system of equations - CITimeSolverHybridAn abstract class for solving a Boltzmann-Poisson system of equations coupled to a fluid model - CITimeSolverRPBase class for the time solvers - CITimeStepper - CIVlasovSolver - CKineticSourceA class that describes a source of particles - CKrookSourceAdaptiveA class that describes a source of particles - CKrookSourceConstantA class that describes a source of particles - CLagrangeA class which implements Lagrange polynomials - CLagrangeInterpolatorA class for interpolating a function using Lagrange polynomials - CManufacturedPoissonTestDefining the corresponding RHS of the Poisson equation for a given exact solution - CMatrix - CMatrix_Banded - CMatrix_Center_Block - CMatrix_Corner_Block - CMatrix_Dense - CMatrix_PDS_Tridiag - CMatrix_Periodic_Banded - CMatrixBatchMatrixBatch superclass for managing a collection of linear systems - CMatrixBatchEllMatrix class which is able to manage and solve a batch of sparse linear systems - CMatrixBatchTridiagA structure for solving a set of independant tridiagonal systems using a direct method - CMaxwellianEquilibriumA class that initializes the distribution function as a Maxwellian - ►CMomentsMoments discrete dimension to access constant attributes related to fluid moments - CImplImpl object storing attributes in MemorySpace - CMuDefine non periodic magnetic momentum \(\mu\) - CNullAdvectionVelocity - CNullFluidSolverA dommy class that solves a fluid model - CNullQNSolverNull operator - CPoissonLikeRHSFunctionType of right-hand side (rhs) function of the Poisson equation - CPoissonSolutionBase class for the exact solutions of the Poisson equation - ►CPolarBSplinesA class containing all information describing polar bsplines - ►CImplThe Impl class holds the implementation of the PolarBSplines - CCorner1TagThe tag for the first corner of the Barycentric coordinates - CCorner2TagThe tag for the second corner of the Barycentric coordinates - CCorner3TagThe tag for the third corner of the Barycentric coordinates - CIntermediateBernsteinBasis - CPolarBSplinesRP - CPolarSplineA structure containing the two Chunks necessary to define a spline on a set of polar basis splines - CPolarSplineEvaluatorDefine an evaluator on polar B-splines - ►CPolarSplineFEMPoissonLikeSolverDefine a polar PDE solver for a Poisson-like equation - CPBasisSubset - CPCellDim - CQDimPMeshTag the second dimension for the quadrature mesh - CQDimRMeshTag the first dimension for the quadrature mesh - CRBasisSubset - CRCellDim - CPolarSplineSpanA structure containing the two ChunkSpans necessary to define a reference to a spline on a set of polar basis splines - CPolarSplineViewA structure containing the two ChunkViews necessary to define a constant reference to a spline on a set of polar basis splines - ►CPolynomialEvaluator - CEvaluator - CPreallocatableLagrangeInterpolatorA class which stores information necessary to create an instance of the LagrangeInterpolator class - CPreallocatableSplineInterpolatorA class which stores information necessary to create an instance of the SplineInterpolator class - CPreallocatableSplineInterpolatorRPA class which stores information necessary to create a pointer to an instance of the SplineInterpolatorRP class - CPredCorrA class that solves a Boltzmann-Poisson system of equations using a predictor-corrector scheme - CPredCorrHybridA class that solves a Boltzmann-Poisson system of equations coupled to a fluid particles model using a predictor-corrector scheme - CQNSolverAn operator which solves the Quasi-Neutrality equation using a fast Fourier transform - CQuadratureA class providing an operator for integrating functions defined on a discrete domain - CRDimPDefine periodic real Theta dimension - CRDimRDefine non periodic real R dimension - CRDimTA class which describes the real space in the temporal direction - CRDimVpDefine periodic real Theta velocity dimension - CRDimVrDefine non periodic real R velocity dimension - CRDimVxDefine non periodic real X velocity dimension - CRDimVyDefine non periodic real Y velocity dimension - CRDimXDefine non periodic real X dimension - CRDimYDefine non periodic real Y dimension - ►CRefinedDiscreteToCartesianA class for describing refined discrete 2D mappings from the logical domain to the physical domain - CBSplinePRefined - CBSplineRRefined - CIDimPRefined - CIDimRRefined - CRDimPRefinedDefine periodic real refined P dimension - CRDimRRefinedDefine non periodic real refined R dimension - CRDimXRefinedDefine non periodic real refined X dimension - CRDimYRefinedDefine non periodic real refined X dimension - CRestartInitializationA class that initializes the distribution function from a previous simulation - CRK2A class which provides an implementation of a second-order Runge-Kutta method - CRK3A class which provides an implementation of a third-order Runge-Kutta method - CRK4A class which provides an implementation of a fourth-order Runge-Kutta method - CRotationAdvectionFieldSimulationSimulation of a rotated Gaussian - CRotationSimulationSimulation of a rotated Gaussian - CSingleModePerturbInitializationA class that initializes the distribution function as a perturbed Maxwellian - ►CSpeciesInformationSpecies discrete dimension to access constant attributes related to species - CImplImpl object storing attributes in MemorySpace - CSplineFootFinderDefine a base class for all the time integration methods used for the advection - CSplineInterpolatorA class for interpolating a function using splines - CSplineInterpolatorRPA class for interpolating a function using splines in polar coordinates - CSplitRightHandSideSolverA class that solves a Boltzmann equation using Strang's splitting - CSplitVlasovSolverA class that solves a Vlasov equation using Strang's splitting - Cto_tupleTransform a sequence S to a tuple: - Cto_tuple< std::integer_sequence< T, Ints... > > - Cto_tuple< std::pair< T, U > > - CToDiscreteSubDomainA class to create a DiscreteSubDomain type from a TypeSeq - CTor1Define non periodic radial dimension \(r\) - CTor2Define periodic poloidal dimension \(\theta\) - CTor3Define periodic toroidal dimension \(\varphi\) - CTranslationAdvectionFieldSimulationSimulation of a translated Gaussian - CTranslationSimulationSimulation of a translated Gaussian - Ctuple_to_typesTransform a std::tuple<Args...> to a testing::Types<Args...>, identity otherwise - Ctuple_to_types< std::tuple< Args... > > - CVectorFieldPre-declaration of VectorField - CVectorFieldCommon - CVectorFieldSpanPre-declaration of VectorFieldSpan - CVortexMergerDensitySolutionInitial condition for the vortex merger simulation - CVortexMergerEquilibriaEquilibrium solution of a Vlasov-Poissson equations system in polar coordinates - CVparDefine non periodic parallel velocity \(v_\parallel\) + CBslAdvection1DA class which computes the advection along the dimension of interest IDimInterest + CBslAdvectionRPDefine an advection operator on 2D \((r, \theta)\) domain + CBslAdvectionSpatialA class which computes the spatial advection along the dimension of interest DDimX + CBslAdvectionVelocityA class which computes the velocity advection along the dimension of interest DDimV + CBslExplicitPredCorrRPA second order explicit predictor-corrector for the Vlasov-Poisson equations + CBslImplicitPredCorrRPA second order implicit predictor-corrector for the Vlasov-Poisson equations + CBslPredCorrRPPredictor-corrector for the Vlasov-Poisson equations + CBSplinesP + CBSplinesR + CBSplinesVp + CBSplinesVr + CBSplinesVx + CBSplinesVy + CBSplinesX + CBSplinesY + CBumpontailEquilibriumA class that initializes the distribution function as a sum of two Maxwellian functions + Ccartesian_product_impl + Ccartesian_product_impl< std::tuple< std::tuple< HeadArgs... >, TailTuples... >, OutTupleOfTuples > + Ccartesian_product_impl< std::tuple<>, OutTupleOfTuples > + CCartesianSolutionDefine a Cartesian solution of the Poisson equation + CCartesianToBarycentricCoordinates + CChargeDensityCalculatorA class which computes charges density with Kokkos + CCircularToCartesianA class for describing the circular 2D mapping + CCollisionsGuardHeader Guard for collision operator + CCollisionsInterClass describing the inter-species collision operator + ►CCollisionsIntraClass describing the intra-species collision operator + CGhostedVxA conditional type representing either a uniform or a non-uniform ghosted vx mesh + CGhostedVxStaggeredA conditional type representing either a uniform or a non-uniform ghosted staggered vx mesh + CCollisionSpVparMuA class which computes the collision operator in (vpar,mu) + CConstantFluidInitializationA class that initializes a fluid species with constant moments + CConstantRateA class that describes a reaction rate that is constant + ►CCosineEvaluator + CEvaluator + CCrankNicolsonA class which provides an implementation of a Crank-Nicolson method + CCurvilinear2DToCartesianA class for describing curvilinear 2D mappings from the logical domain to the physical domain + CCurvilinearSolutionDefine a curvilinear solution of the Poisson equation + CCzarnyToCartesianA class for describing the Czarny 2D mapping + CDecentredRotationAdvectionFieldSimulationSimulation of a decentred rotated elipse-type function + CDecentredRotationSimulationSimulation of a decentred rotated elipse-type function + CDerivField + CDerivField< ElementType, ddc::DiscreteDomain< DDims... >, NDerivs, Allocator >A class which holds a chunk of memory describing a field and its derivatives + CDerivFieldCommon + CDerivFieldCommon< ChunkType, ddc::DiscreteDomain< DDims... > >An abstract class which holds a chunk of memory describing a field and its derivatives + CDerivFieldSpan + CDerivFieldSpan< ElementType, ddc::DiscreteDomain< DDims... >, LayoutStridedPolicy, MemorySpace >A class which holds references to chunks of memory describing a field and its derivatives + CDiffusiveNeutralSolverA class that solves a so-called "pressure-diffusive" fluid neutral model + CDimX_pCTag the first non periodic dimension in the pseudo_Cartesian domain + CDimY_pCTag the second non periodic dimension in the pseudo_Cartesian domain + CDiocotronDensitySolutionThe diocotron exact solution of the density \( \rho \) + CDiscreteSubDomainA class which describes a collection of ddc::DiscreteElements which form a subdomain + CDiscreteSubDomainIteratorAn iterator type for the DiscreteSubDomain + CDiscreteToCartesianA class for describing discrete 2D mappings from the logical domain to the physical domain + CEdgeDefine an edge of a given patch + CEdgeCoordinatesTransformationTransform a coordinate from one edge to a coordinate on the other edge + CElectrostaticalPotentialSimulationBase class for the advection field for the tests of the 2D polar advection operator + CElectrostaticalPotentialSimulation_decentred_rotationAdvection field for the tests of the 2D polar advection operator + CElectrostaticalPotentialSimulation_rotationAdvection field for the tests of the 2D polar advection operator + CElectrostaticalPotentialSimulation_translationAdvection field for the tests of the 2D polar advection operator + CEulerA class which provides an implementation of an explicit Euler method + ►CEvaluator2D + CEvaluator + ►CFemNonPeriodicQNSolverAn operator which solves the Quasi-Neutrality equation using Finite Elements on a non-periodic domain + CQMeshXThe discrete dimension of the quadrature points + ►CFemPeriodicQNSolverAn operator which solves the Quasi-Neutrality equation using Finite Elements on a periodic domain + CQMeshXThe discrete dimension of the quadrature points + CFFTPoissonSolver + ►CFFTPoissonSolver< ddc::DiscreteDomain< DDims... >, FullDomain, ExecSpace, LayoutSpace >A class solve the follwing equation: \( -\Delta \phi = \rho \) using a Fourier transform + CIDimFourier + ►CFluidMomentsA class that computes fluid moments of the distribution function + CMomentDensityA tag type to indicate that the density should be calculated + CMomentTemperatureA tag type to indicate that the temperature should be calculated + CMomentVelocityA tag type to indicate that the velocity should be calculated + Cfor_each_tuple_cat + Cfor_each_tuple_cat< std::tuple< Tuples... >, Tuple > + CFunctionToBeAdvectedBase class for the test functions for the 2D polar advection operator + CFunctionToBeAdvected_cos_4_elipseTest function for the 2D polar advection operator + CFunctionToBeAdvected_gaussianTest function for the 2D polar advection operator + CGaussLegendre + CGaussLegendreCoefficients + CGeometryXVxA class providing aliases for useful subdomains of the geometry + CGeometryXYVxVyA class providing aliases for useful subdomains of the geometry + CGridMu + CGridTor1 + CGridTor2 + CGridTor3 + CGridVpar + CHiddenNUBSplinesX + CIAdvectionRPDefine the base class of 2D advection operators in polar domain + CIAdvectionSpatialA class which provides an advection operator + CIAdvectionVelocityA class which provides an advection operator + CIBoltzmannSolverAn abstract class for solving a Boltzmann equation + CIChargeDensityCalculatorA class which calculates the charge density + CIDimM + CIDimP + CIDimR + CIDimSp + CIDimVp + CIDimVr + CIDimVx + CIDimVy + CIDimX + CIDimY + CIEquilibriumAn abstract class for initializing a distribution function that does not depend on space + CIFluidInitializationAn abstract class that allows for initializing a fluid species + CIFluidSolverAn abstract class for solving a fluid model + CIFootFinderDefine a base class for all the time integration methods used for the advection + CIInitializationAn abstract class that allows for initializing a distribution function + CIInterpolatorA class which provides an interpolating function + CIInterpolatorRPA class which provides an interpolating function + CInterfaceRepresent a simple sticking of two edges + Cinterpolator_on_domain + Cinterpolator_on_domain< Interp, DDimI, ddc::DiscreteDomain< DDim... > >A structure which builds an interpolation type + CIPoissonSolver + CIPoissonSolver< ddc::DiscreteDomain< ODims... >, FullDomain, LayoutSpace, MemorySpace >An abstract class from which a Poisson solver can inherit + CIPreallocatableInterpolatorA class which provides access to an interpolating function which can be preallocated where useful + CIPreallocatableInterpolatorRPA class which provides access to an interpolating function which can be preallocated where useful + CIQNSolverBase class for a Quasi-Neutrality solver + CIReactionRateAn abstract interface representing a reaction rate that depends on temperature and density + CIRightHandSideAn abstract class representing a source in Boltzmann equation + Cis_subdomain_collection + Cis_subdomain_collection< DiscreteSubDomain< Tags... > > + CITimeSolverAn abstract class for solving a Boltzmann-Poisson system of equations + CITimeSolverHybridAn abstract class for solving a Boltzmann-Poisson system of equations coupled to a fluid model + CITimeSolverRPBase class for the time solvers + CITimeStepper + CIVlasovSolver + CKineticSourceA class that describes a source of particles + CKrookSourceAdaptiveA class that describes a source of particles + CKrookSourceConstantA class that describes a source of particles + CLagrangeA class which implements Lagrange polynomials + CLagrangeInterpolatorA class for interpolating a function using Lagrange polynomials + CManufacturedPoissonTestDefining the corresponding RHS of the Poisson equation for a given exact solution + CMatrix + CMatrix_Banded + CMatrix_Center_Block + CMatrix_Corner_Block + CMatrix_Dense + CMatrix_PDS_Tridiag + CMatrix_Periodic_Banded + CMatrixBatchMatrixBatch superclass for managing a collection of linear systems + CMatrixBatchEllMatrix class which is able to manage and solve a batch of sparse linear systems + CMatrixBatchTridiagA structure for solving a set of independant tridiagonal systems using a direct method + CMaxwellianEquilibriumA class that initializes the distribution function as a Maxwellian + ►CMomentsMoments discrete dimension to access constant attributes related to fluid moments + CImplImpl object storing attributes in MemorySpace + CMuDefine non periodic magnetic momentum \(\mu\) + CNullAdvectionVelocity + CNullFluidSolverA dommy class that solves a fluid model + CNullQNSolverNull operator + CPoissonLikeRHSFunctionType of right-hand side (rhs) function of the Poisson equation + CPoissonSolutionBase class for the exact solutions of the Poisson equation + ►CPolarBSplinesA class containing all information describing polar bsplines + ►CImplThe Impl class holds the implementation of the PolarBSplines + CCorner1TagThe tag for the first corner of the Barycentric coordinates + CCorner2TagThe tag for the second corner of the Barycentric coordinates + CCorner3TagThe tag for the third corner of the Barycentric coordinates + CIntermediateBernsteinBasis + CPolarBSplinesRP + CPolarSplineA structure containing the two Chunks necessary to define a spline on a set of polar basis splines + CPolarSplineEvaluatorDefine an evaluator on polar B-splines + ►CPolarSplineFEMPoissonLikeSolverDefine a polar PDE solver for a Poisson-like equation + CPBasisSubset + CPCellDim + CQDimPMeshTag the second dimension for the quadrature mesh + CQDimRMeshTag the first dimension for the quadrature mesh + CRBasisSubset + CRCellDim + CPolarSplineSpanA structure containing the two ChunkSpans necessary to define a reference to a spline on a set of polar basis splines + CPolarSplineViewA structure containing the two ChunkViews necessary to define a constant reference to a spline on a set of polar basis splines + ►CPolynomialEvaluator + CEvaluator + CPreallocatableLagrangeInterpolatorA class which stores information necessary to create an instance of the LagrangeInterpolator class + CPreallocatableSplineInterpolatorA class which stores information necessary to create an instance of the SplineInterpolator class + CPreallocatableSplineInterpolatorRPA class which stores information necessary to create a pointer to an instance of the SplineInterpolatorRP class + CPredCorrA class that solves a Boltzmann-Poisson system of equations using a predictor-corrector scheme + CPredCorrHybridA class that solves a Boltzmann-Poisson system of equations coupled to a fluid particles model using a predictor-corrector scheme + CQNSolverAn operator which solves the Quasi-Neutrality equation using a fast Fourier transform + CQuadratureA class providing an operator for integrating functions defined on a discrete domain + CRDimPDefine periodic real Theta dimension + CRDimRDefine non periodic real R dimension + CRDimTA class which describes the real space in the temporal direction + CRDimVpDefine periodic real Theta velocity dimension + CRDimVrDefine non periodic real R velocity dimension + CRDimVxDefine non periodic real X velocity dimension + CRDimVyDefine non periodic real Y velocity dimension + CRDimXDefine non periodic real X dimension + CRDimYDefine non periodic real Y dimension + ►CRefinedDiscreteToCartesianA class for describing refined discrete 2D mappings from the logical domain to the physical domain + CBSplinePRefined + CBSplineRRefined + CIDimPRefined + CIDimRRefined + CRDimPRefinedDefine periodic real refined P dimension + CRDimRRefinedDefine non periodic real refined R dimension + CRDimXRefinedDefine non periodic real refined X dimension + CRDimYRefinedDefine non periodic real refined X dimension + CRestartInitializationA class that initializes the distribution function from a previous simulation + CRK2A class which provides an implementation of a second-order Runge-Kutta method + CRK3A class which provides an implementation of a third-order Runge-Kutta method + CRK4A class which provides an implementation of a fourth-order Runge-Kutta method + CRotationAdvectionFieldSimulationSimulation of a rotated Gaussian + CRotationSimulationSimulation of a rotated Gaussian + CSingleModePerturbInitializationA class that initializes the distribution function as a perturbed Maxwellian + ►CSpeciesInformationSpecies discrete dimension to access constant attributes related to species + CImplImpl object storing attributes in MemorySpace + CSplineFootFinderDefine a base class for all the time integration methods used for the advection + CSplineInterpolatorA class for interpolating a function using splines + CSplineInterpolatorRPA class for interpolating a function using splines in polar coordinates + CSplitRightHandSideSolverA class that solves a Boltzmann equation using Strang's splitting + CSplitVlasovSolverA class that solves a Vlasov equation using Strang's splitting + Cto_tupleTransform a sequence S to a tuple: + Cto_tuple< std::integer_sequence< T, Ints... > > + Cto_tuple< std::pair< T, U > > + CToDiscreteSubDomainA class to create a DiscreteSubDomain type from a TypeSeq + CTor1Define non periodic radial dimension \(r\) + CTor2Define periodic poloidal dimension \(\theta\) + CTor3Define periodic toroidal dimension \(\varphi\) + CTranslationAdvectionFieldSimulationSimulation of a translated Gaussian + CTranslationSimulationSimulation of a translated Gaussian + Ctuple_to_typesTransform a std::tuple<Args...> to a testing::Types<Args...>, identity otherwise + Ctuple_to_types< std::tuple< Args... > > + CVectorFieldPre-declaration of VectorField + CVectorFieldCommon + CVectorFieldSpanPre-declaration of VectorFieldSpan + CVortexMergerDensitySolutionInitial condition for the vortex merger simulation + CVortexMergerEquilibriaEquilibrium solution of a Vlasov-Poissson equations system in polar coordinates + CVparDefine non periodic parallel velocity \(v_\parallel\) diff --git a/annotated.js b/annotated.js index 692d5d1f9..914432d3a 100644 --- a/annotated.js +++ b/annotated.js @@ -12,6 +12,7 @@ var annotated = [ "AdvectionSimulation", "classAdvectionSimulation.html", "classAdvectionSimulation" ], [ "AnalyticalInvertibleCurvilinear2DToCartesian", "classAnalyticalInvertibleCurvilinear2DToCartesian.html", "classAnalyticalInvertibleCurvilinear2DToCartesian" ], [ "BernsteinPolynomialBasis", "classBernsteinPolynomialBasis.html", "classBernsteinPolynomialBasis" ], + [ "BslAdvection1D", "classBslAdvection1D.html", "classBslAdvection1D" ], [ "BslAdvectionRP", "classBslAdvectionRP.html", "classBslAdvectionRP" ], [ "BslAdvectionSpatial", "classBslAdvectionSpatial.html", "classBslAdvectionSpatial" ], [ "BslAdvectionVelocity", "classBslAdvectionVelocity.html", "classBslAdvectionVelocity" ], diff --git a/bsl__advection__1d_8hpp_source.html b/bsl__advection__1d_8hpp_source.html new file mode 100644 index 000000000..93ed6c2a1 --- /dev/null +++ b/bsl__advection__1d_8hpp_source.html @@ -0,0 +1,309 @@ + + + + + + + +Gyselalib++: /home/runner/work/gyselalibxx/gyselalibxx/code_branch/src/advection/bsl_advection_1d.hpp Source File + + + + + + + + + + + + + + + + +
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bsl_advection_1d.hpp
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1 // SPDX-License-Identifier: MIT
+
2 
+
3 #pragma once
+
4 
+
5 #include <ddc/ddc.hpp>
+
6 #include <ddc/kernels/splines/deriv.hpp>
+
7 
+
8 #include "ddc_helper.hpp"
+
9 #include "euler.hpp"
+
10 #include "iinterpolator.hpp"
+
11 
+
12 
+
50 template <
+
51  class IDimInterest,
+
52  class AdvectionDomain,
+
53  class FunctionDomain,
+
54  class AdvectionFieldBuilder,
+
55  class AdvectionFieldEvaluator,
+
56  class TimeStepper
+
57  = Euler<device_t<ddc::Chunk<
+
58  ddc::Coordinate<typename IDimInterest::continuous_dimension_type>,
+
59  AdvectionDomain>>,
+
60  device_t<ddc::Chunk<double, AdvectionDomain>>>>
+
61 class BslAdvection1D
+
62 {
+
63 private:
+
64  // Advection domain element:
+
65  using AdvectionIndex = typename AdvectionDomain::discrete_element_type;
+
66 
+
67  // Full domain element:
+
68  using FunctionIndex = typename FunctionDomain::discrete_element_type;
+
69 
+
70  // Advection dimension (or Interest dimension):
+
71  using RDimInterest = typename IDimInterest::continuous_dimension_type;
+
72  using CoordInterest = ddc::Coordinate<RDimInterest>;
+
73  using DomainInterest = ddc::DiscreteDomain<IDimInterest>;
+
74  using IndexInterest = typename DomainInterest::discrete_element_type;
+
75 
+
76  // Type for the feet and advection field:
+
77  using FeetChunk = device_t<ddc::Chunk<CoordInterest, AdvectionDomain>>;
+
78  using FeetSpan = typename FeetChunk::span_type;
+
79  using FeetView = typename FeetChunk::view_type;
+
80 
+
81  using AdvecFieldChunk = device_t<ddc::Chunk<double, AdvectionDomain>>;
+
82  using AdvecFieldSpan = typename AdvecFieldChunk::span_type;
+
83 
+
84  using FunctionSpan = device_t<ddc::ChunkSpan<double, FunctionDomain>>;
+
85 
+
86  // Type for spline representation of the advection field
+
87  using BSAdvectionDomain = typename AdvectionFieldBuilder::spline_domain_type;
+
88  using AdvecFieldSplineChunk = device_t<ddc::Chunk<double, BSAdvectionDomain>>;
+
89  using AdvecFieldSplineSpan = device_t<ddc::ChunkSpan<double, BSAdvectionDomain>>;
+
90 
+
91  // Type for the derivatives of the advection field
+
92  using DerivDim = ddc::Deriv<RDimInterest>;
+
93  using DomainInterestDeriv = ddc::DiscreteDomain<DerivDim>;
+
94  using AdvecFieldDerivDomain = decltype(ddc::replace_dim_of<IDimInterest, DerivDim>(
+
95  std::declval<AdvectionDomain>(),
+
96  std::declval<DomainInterestDeriv>()));
+
97  using AdvecFieldDerivView = device_t<ddc::ChunkSpan<const double, AdvecFieldDerivDomain>>;
+
98 
+
99 
+
100  // Interpolators:
+
101  using FunctionPreallocatableInterpolatorType
+
102  = interpolator_on_domain_t<IPreallocatableInterpolator, IDimInterest, FunctionDomain>;
+
103  using FunctionInterpolatorType
+
104  = interpolator_on_domain_t<IInterpolator, IDimInterest, FunctionDomain>;
+
105 
+
106 
+
107  FunctionPreallocatableInterpolatorType const& m_function_interpolator;
+
108 
+
109  AdvectionFieldBuilder const& m_adv_field_builder;
+
110  AdvectionFieldEvaluator const& m_adv_field_evaluator;
+
111 
+
112  TimeStepper const& m_time_stepper;
+
113 
+
114 public:
+
132  explicit BslAdvection1D(
+
133  FunctionPreallocatableInterpolatorType const& function_interpolator,
+
134  AdvectionFieldBuilder const& adv_field_builder,
+
135  AdvectionFieldEvaluator const& adv_field_evaluator,
+
136  TimeStepper const& time_stepper)
+
137  : m_function_interpolator(function_interpolator)
+
138  , m_adv_field_builder(adv_field_builder)
+
139  , m_adv_field_evaluator(adv_field_evaluator)
+
140  , m_time_stepper(time_stepper)
+
141  {
+
142  }
+
143 
+
144  ~BslAdvection1D() = default;
+
145 
+
159  FunctionSpan operator()(
+
160  FunctionSpan const allfdistribu,
+
161  AdvecFieldSpan const advection_field,
+
162  double const dt,
+
163  std::optional<AdvecFieldDerivView> const advection_field_derivatives_min = std::nullopt,
+
164  std::optional<AdvecFieldDerivView> const advection_field_derivatives_max
+
165  = std::nullopt) const
+
166  {
+
167  Kokkos::Profiling::pushRegion("BslAdvection1D");
+
168 
+
169  // Get domains and operators .............................................................
+
170  FunctionDomain const function_dom = allfdistribu.domain();
+
171  AdvectionDomain const advection_dom = advection_field.domain();
+
172  auto const batch_dom = ddc::remove_dims_of(function_dom, advection_dom);
+
173  DomainInterest const interest_dom(advection_dom);
+
174 
+
175  std::unique_ptr<FunctionInterpolatorType> const function_interpolator_ptr
+
176  = m_function_interpolator.preallocate();
+
177  FunctionInterpolatorType const& function_interpolator = *function_interpolator_ptr;
+
178 
+
179 
+
180  // Build spline representation of the advection field ....................................
+
181  AdvecFieldSplineChunk advection_field_coefs_alloc(m_adv_field_builder.spline_domain());
+
182  AdvecFieldSplineSpan advection_field_coefs = advection_field_coefs_alloc.span_view();
+
183 
+
184  m_adv_field_builder(
+
185  advection_field_coefs,
+
186  advection_field.span_cview(),
+
187  advection_field_derivatives_min,
+
188  advection_field_derivatives_max);
+
189 
+
190 
+
191  // Initialise the characteristics on the mesh points .....................................
+
192  /*
+
193  For the time integration solver, the function we advect (here the characteristics)
+
194  need to be defined on the same domain as the advection field. We then work on space
+
195  slices of the characteristic feet.
+
196  */
+
197  FeetChunk slice_feet_alloc(advection_dom);
+
198  FeetSpan slice_feet = slice_feet_alloc.span_view();
+
199  ddc::parallel_for_each(
+
200  Kokkos::DefaultExecutionSpace(),
+
201  advection_dom,
+
202  KOKKOS_LAMBDA(AdvectionIndex const idx) {
+
203  slice_feet(idx) = ddc::coordinate(IndexInterest(idx));
+
204  });
+
205 
+
206 
+
207  // Compute the characteristic feet .......................................................
+
208  /*
+
209  We use a time stepper method to solve the charateristic equation.
+
210  A TimeStepper needs a function to compute the updated advection field and a function to
+
211  compute the updated feet.
+
212  * update_adv_field: evaluate the advection field spline at the updated feet.
+
213  */
+
214  // The function describing how the derivative of the evolve function is calculated.
+
215  std::function<void(AdvecFieldSpan, FeetView)> update_adv_field
+
216  = [&](AdvecFieldSpan updated_advection_field, FeetView slice_feet) {
+
217  m_adv_field_evaluator(
+
218  updated_advection_field,
+
219  slice_feet,
+
220  advection_field_coefs.span_cview());
+
221  };
+
222 
+
223 
+
224  // Solve the characteristic equation with a time integration method
+
225  m_time_stepper
+
226  .update(Kokkos::DefaultExecutionSpace(),
+
227  slice_feet.span_view(),
+
228  -dt,
+
229  update_adv_field);
+
230 
+
231 
+
232  // Interpolate the function ..............................................................
+
233  /*
+
234  To interpolate the function we want to advect, we build for the feet a Chunk defined
+
235  on the domain where the function is defined.
+
236  */
+
237  device_t<ddc::Chunk<CoordInterest, FunctionDomain>> feet_alloc(function_dom);
+
238  ddc::ChunkSpan feet = feet_alloc.span_view();
+
239  ddc::parallel_for_each(
+
240  Kokkos::DefaultExecutionSpace(),
+
241  function_dom,
+
242  KOKKOS_LAMBDA(FunctionIndex const idx) {
+
243  AdvectionIndex slice_foot_index(idx);
+
244  feet(idx) = slice_feet(slice_foot_index);
+
245  });
+
246 
+
247 
+
248  // Interpolate the function at the characteristic feet
+
249  function_interpolator(allfdistribu, feet);
+
250 
+
251 
+
252  Kokkos::Profiling::popRegion();
+
253  return allfdistribu;
+
254  }
+
255 };
+
AdvectionDomain
Define a domain for the advection.
Definition: advection_domain.hpp:41
+
BslAdvection1D
A class which computes the advection along the dimension of interest IDimInterest.
Definition: bsl_advection_1d.hpp:62
+
BslAdvection1D::operator()
FunctionSpan operator()(FunctionSpan const allfdistribu, AdvecFieldSpan const advection_field, double const dt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_min=std::nullopt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_max=std::nullopt) const
Advects allfdistribu along the advection dimension IDimInterest for a duration dt.
Definition: bsl_advection_1d.hpp:159
+
BslAdvection1D::BslAdvection1D
BslAdvection1D(FunctionPreallocatableInterpolatorType const &function_interpolator, AdvectionFieldBuilder const &adv_field_builder, AdvectionFieldEvaluator const &adv_field_evaluator, TimeStepper const &time_stepper)
Constructor when the advection domain and the function domain are different.
Definition: bsl_advection_1d.hpp:132
+
Euler
A class which provides an implementation of an explicit Euler method.
Definition: euler.hpp:28
+
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+ + + + diff --git a/classBslAdvection1D-members.html b/classBslAdvection1D-members.html new file mode 100644 index 000000000..5f8653123 --- /dev/null +++ b/classBslAdvection1D-members.html @@ -0,0 +1,121 @@ + + + + + + + +Gyselalib++: Member List + + + + + + + + + + + + + + + + +
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BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper > Member List
+
+
+ +

This is the complete list of members for BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >, including all inherited members.

+ + + + +
BslAdvection1D(FunctionPreallocatableInterpolatorType const &function_interpolator, AdvectionFieldBuilder const &adv_field_builder, AdvectionFieldEvaluator const &adv_field_evaluator, TimeStepper const &time_stepper)BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >inlineexplicit
operator()(FunctionSpan const allfdistribu, AdvecFieldSpan const advection_field, double const dt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_min=std::nullopt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_max=std::nullopt) constBslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >inline
~BslAdvection1D()=default (defined in BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >)BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >
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+ + + + diff --git a/classBslAdvection1D.html b/classBslAdvection1D.html new file mode 100644 index 000000000..ee8a488f6 --- /dev/null +++ b/classBslAdvection1D.html @@ -0,0 +1,296 @@ + + + + + + + +Gyselalib++: BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper > Class Template Reference + + + + + + + + + + + + + + + + +
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+Public Member Functions | +List of all members
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+
BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper > Class Template Reference
+
+
+ +

A class which computes the advection along the dimension of interest IDimInterest. + More...

+ + + + + + + + +

+Public Member Functions

 BslAdvection1D (FunctionPreallocatableInterpolatorType const &function_interpolator, AdvectionFieldBuilder const &adv_field_builder, AdvectionFieldEvaluator const &adv_field_evaluator, TimeStepper const &time_stepper)
 Constructor when the advection domain and the function domain are different. More...
 
FunctionSpan operator() (FunctionSpan const allfdistribu, AdvecFieldSpan const advection_field, double const dt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_min=std::nullopt, std::optional< AdvecFieldDerivView > const advection_field_derivatives_max=std::nullopt) const
 Advects allfdistribu along the advection dimension IDimInterest for a duration dt. More...
 
+

Detailed Description

+

template<class IDimInterest, class AdvectionDomain, class FunctionDomain, class AdvectionFieldBuilder, class AdvectionFieldEvaluator, class TimeStepper = Euler<device_t<ddc::Chunk< ddc::Coordinate<typename IDimInterest::continuous_dimension_type>, AdvectionDomain>>, device_t<ddc::Chunk<double, AdvectionDomain>>>>
+class BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >

+ +

A class which computes the advection along the dimension of interest IDimInterest.

+

This operator solves the following equation type

+

\( \partial_t f_s(t,x) + A_{s, x_i} (x') \cdot \partial_{x_i} f_s (t, x) = 0, \qquad x\in \Omega, x'\in\Omega'\)

+

with

    +
  • \( f \), a function defined on a domain \( \Omega \);
    • +
  • \( A \), an advection field defined on subdomain \( \Omega'\subset \Omega \);
    • +
  • \( x_i \), an advection dimension.
    • +
+

The characteristic equation is solved on the advection domain \( \Omega'\). Then the feet on \( \Omega\) are computed from the characteristic feet on \( \Omega'\) and the function \( f \) is interpolated at the feet in \( \Omega \).

+

The characteristic equation is solved using a time integration method (ITimeStepper).

+
Template Parameters
+ + + + + + + +
IDimInterestThe dimension along which the advection is computed. It refers to the dimension of \( x_i \) in the equation.
AdvectionDomainThe domain \( \Omega' \) where the characteristic equation is solved. It also refers to the domain of the advection field. It had to also be defined on the IDimInterest for the time integration method.
FunctionDomainThe domain \( \Omega \) where allfdistribu is defined.
AdvectionFieldBuilderThe type of the spline builder for the advection field (see SplineBuilder).
AdvectionFieldEvaluatorThe type of the spline evalutor for the advection field (see SplineEvaluator).
+
TimeStepperThe time integration method applied to solve the characteristic equation. The method is picked among the child classes of ITimeStepper.
+
+
+

Constructor & Destructor Documentation

+ +

◆ BslAdvection1D()

+ +
+
+
+template<class IDimInterest , class AdvectionDomain , class FunctionDomain , class AdvectionFieldBuilder , class AdvectionFieldEvaluator , class TimeStepper = Euler<device_t<ddc::Chunk< ddc::Coordinate<typename IDimInterest::continuous_dimension_type>, AdvectionDomain>>, device_t<ddc::Chunk<double, AdvectionDomain>>>>
+ + + + + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >::BslAdvection1D (FunctionPreallocatableInterpolatorType const & function_interpolator,
AdvectionFieldBuilder const & adv_field_builder,
AdvectionFieldEvaluator const & adv_field_evaluator,
TimeStepper const & time_stepper 
)
+ 		+inlineexplicit
+
+ +

Constructor when the advection domain and the function domain are different.

+

When AdvectionDomain and FunctionDomain are different, we need one interpolator for each domain.

+

We can also use it when we want two differents interpolators but defined on the same domain (e.g. different boundary conditions for the evaluators).

+
Parameters
+ + + + + +
[in]function_interpolatorinterpolator along the IDimInterest direction to interpolate the advected function (allfdistribu) on the domain of the function.
[in]adv_field_builderbuilder along the IDimInterest direction to build a spline representation of the advection field on the function domain.
[in]adv_field_evaluatorevaluator along the IDimInterest direction to evaluate the advection field spline representation on the function domain.
+
[in]time_steppertime integration method for the characteristic equation.
+
+
+ +
+
+

Member Function Documentation

+ +

◆ operator()()

+ +
+
+
+template<class IDimInterest , class AdvectionDomain , class FunctionDomain , class AdvectionFieldBuilder , class AdvectionFieldEvaluator , class TimeStepper = Euler<device_t<ddc::Chunk< ddc::Coordinate<typename IDimInterest::continuous_dimension_type>, AdvectionDomain>>, device_t<ddc::Chunk<double, AdvectionDomain>>>>
+ + + + + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
FunctionSpan BslAdvection1D< IDimInterest, AdvectionDomain, FunctionDomain, AdvectionFieldBuilder, AdvectionFieldEvaluator, TimeStepper >::operator() (FunctionSpan const allfdistribu,
AdvecFieldSpan const advection_field,
double const dt,
std::optional< AdvecFieldDerivView > const advection_field_derivatives_min = std::nullopt,
std::optional< AdvecFieldDerivView > const advection_field_derivatives_max = std::nullopt 
) const
+ 		+inline
+
+ +

Advects allfdistribu along the advection dimension IDimInterest for a duration dt.

+
Parameters
+ + + + + + +
[in,out]allfdistribuReference to the advected function, allocated on the device
[in]advection_fieldReference to the advection field, allocated on the device.
[in]advection_field_derivatives_minReference to the advection field derivatives at the left side of the interest dimension, allocated on the device.
[in]advection_field_derivatives_maxReference to the advection field derivatives at the right side of the interest dimension, allocated on the device.
[in]dtTime step.
+
+
+
Returns
A reference to the allfdistribu array after advection on dt.
+ +
+
+
The documentation for this class was generated from the following file: +
+
+ + + + diff --git a/classBslAdvection1D.js b/classBslAdvection1D.js new file mode 100644 index 000000000..74a769920 --- /dev/null +++ b/classBslAdvection1D.js @@ -0,0 +1,6 @@ +var classBslAdvection1D = +[ + [ "BslAdvection1D", "classBslAdvection1D.html#aff5c03a458a3a3cf78a7288feebfa047", null ], + [ "~BslAdvection1D", "classBslAdvection1D.html#a0002abc62788683ef1e23795a8a03f19", null ], + [ "operator()", "classBslAdvection1D.html#ab1d8bc9d409c4fc5a140d502bf9f5015", null ] +]; \ No newline at end of file diff --git a/dir_7e7830f61a7bd274c10f9a89d5b51635.js b/dir_7e7830f61a7bd274c10f9a89d5b51635.js index c18adcdf0..6c41f7111 100644 --- a/dir_7e7830f61a7bd274c10f9a89d5b51635.js +++ b/dir_7e7830f61a7bd274c10f9a89d5b51635.js @@ -1,43 +1,7 @@ var dir_7e7830f61a7bd274c10f9a89d5b51635 = [ - [ "Field setup", "simulations_geometryRTheta_diocotron.html#autotoc_md20", null ], - [ "General case", "simulations_geometryRTheta_diocotron.html#autotoc_md21", null ], - [ "Simplified case", "simulations_geometryRTheta_diocotron.html#autotoc_md22", null ], - [ "Predictor-corrector", "simulations_geometryRTheta_diocotron.html#autotoc_md23", null ], - [ "Recommended parameters:", "simulations_geometryRTheta_diocotron.html#autotoc_md24", null ], - [ "Executables:", "simulations_geometryRTheta_diocotron.html#autotoc_md25", null ], - [ "Field setup", "simulations_geometryRTheta_vortex_merger.html#autotoc_md26", null ], - [ "General case", "simulations_geometryRTheta_vortex_merger.html#autotoc_md27", null ], - [ "Simplified case", "simulations_geometryRTheta_vortex_merger.html#autotoc_md28", null ], - [ "Recommended parameters:", "simulations_geometryRTheta_vortex_merger.html#autotoc_md29", null ], - [ "Executables:", "simulations_geometryRTheta_vortex_merger.html#autotoc_md30", null ], - [ "Explicit Euler method", "src_geometryRTheta_advection.html#autotoc_md31", null ], - [ "Crank-Nicolson method", "src_geometryRTheta_advection.html#autotoc_md32", null ], - [ "RK3 method", "src_geometryRTheta_advection.html#autotoc_md33", null ], - [ "RK4 method", "src_geometryRTheta_advection.html#autotoc_md34", null ], - [ "Advection field along the physical domain axis", "src_geometryRTheta_advection_field.html#autotoc_md38", null ], - [ "Advection field along the logical domain axis", "src_geometryRTheta_advection_field.html#autotoc_md39", [ - [ "General coordinates system", "src_geometryRTheta_advection_field.html#autotoc_md40", null ], - [ "Aplication to the advection field", "src_geometryRTheta_advection_field.html#autotoc_md41", null ] - ] ], - [ "Initialization", "src_geometryRTheta_initialization.html#autotoc_md44", null ], - [ "Equilibirum", "src_geometryRTheta_initialization.html#autotoc_md45", null ], - [ "Dispersion relation", "src_geometryRTheta_initialization.html#autotoc_md46", null ], - [ "Equilibirum", "src_geometryRTheta_initialization.html#autotoc_md47", null ], - [ "References", "src_geometryRTheta_initialization.html#autotoc_md48", null ], - [ "B-splines FEM", "src_geometryRTheta_poisson.html#autotoc_md49", [ - [ "The B-splines", "src_geometryRTheta_poisson.html#autotoc_md50", null ], - [ "Treatment of the O-point", "src_geometryRTheta_poisson.html#autotoc_md51", null ], - [ "Weak formulation", "src_geometryRTheta_poisson.html#autotoc_md52", null ] - ] ], - [ "Multi-patch domain", "src_multipatch_interfaces.html#autotoc_md53", null ], - [ "Edges", "src_multipatch_interfaces.html#autotoc_md54", null ], - [ "Sticking and Coordinate Transformation", "src_multipatch_interfaces.html#autotoc_md55", null ], - [ "- The mapping and the domain used for the advection:", "tests_geometryRTheta_advection_2d_rp.html#autotoc_md66", null ], - [ "- The time integration method used to solve the characteristic equation:", "tests_geometryRTheta_advection_2d_rp.html#autotoc_md67", null ], - [ "- The test simulation:", "tests_geometryRTheta_advection_2d_rp.html#autotoc_md68", null ], - [ "Functions tests:", "tests_geometryRTheta_2d_spline_interpolator.html#autotoc_md64", null ], - [ "Python scripts", "tests_geometryRTheta_2d_spline_interpolator.html#autotoc_md65", null ], + [ "Functions tests:", "tests_geometryRTheta_2d_spline_interpolator.html#autotoc_md70", null ], + [ "Python scripts", "tests_geometryRTheta_2d_spline_interpolator.html#autotoc_md71", null ], [ "constantfluidinitialization.hpp", "constantfluidinitialization_8hpp_source.html", null ], [ "ifluidinitialization.hpp", "ifluidinitialization_8hpp_source.html", null ] ]; \ No newline at end of file diff --git a/dir_a0723bd535f2195612463753c5d9b125.js b/dir_a0723bd535f2195612463753c5d9b125.js index 1754b0ff5..cd3f505de 100644 --- a/dir_a0723bd535f2195612463753c5d9b125.js +++ b/dir_a0723bd535f2195612463753c5d9b125.js @@ -1,5 +1,6 @@ var dir_a0723bd535f2195612463753c5d9b125 = [ + [ "bsl_advection_1d.hpp", "bsl__advection__1d_8hpp_source.html", null ], [ "bsl_advection_vx.hpp", "bsl__advection__vx_8hpp_source.html", null ], [ "bsl_advection_x.hpp", "bsl__advection__x_8hpp_source.html", null ], [ "iadvectionvx.hpp", "iadvectionvx_8hpp_source.html", null ], diff --git a/dir_e7f7fdb213efe170da06dba4c9873be6.html b/dir_e7f7fdb213efe170da06dba4c9873be6.html new file mode 100644 index 000000000..39d610e18 --- /dev/null +++ b/dir_e7f7fdb213efe170da06dba4c9873be6.html @@ -0,0 +1,116 @@ + + + + + + + +Gyselalib++: /home/runner/work/gyselalibxx/gyselalibxx/build-docs/docs/tests/advection Directory Reference + + + + + + + + + + + + + + + + +
+
+ + + + + + + + +
+
Gyselalib++ +
+
+ + + + + + +
+
+
+ + + +
+
+ +
+
+
+ +
+ +
+
+ + +
+ +
+ +
+
+
advection Directory Reference
+
+
+
+
+ + + + diff --git a/files.html b/files.html index 4473dcd96..7d067b47b 100644 --- a/files.html +++ b/files.html @@ -107,215 +107,216 @@
[detail level 123456]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
 ▼ src
 ▼ advection
 bsl_advection_vx.hpp
 bsl_advection_x.hpp
 iadvectionvx.hpp
 iadvectionx.hpp
 nulladvectionvx.hpp
 ▼ collision
 CollisionSpVparMu.hpp
 koliop_interface.hpp
 ▼ data_types
 deriv_details.hpp
 derivative_field.hpp
 derivative_field_common.hpp
 derivative_field_span.hpp
 discrete_subdomain.hpp
 vector_field.hpp
 vector_field_common.hpp
 vector_field_span.hpp
 ▼ geometry5D
 ► geometry
 ▼ geometryRTheta
 ► advection
 ► advection_field
 ► geometry
 ► initialization
 ► interpolation
 ► poisson
 ► time_solver
 ▼ geometryXVx
 ► boltzmann
 ► geometry
 ► geometryMX
 ► initialization
 ► poisson
 ► rhs
 ► time_integration
 ► time_integration_hybrid
 ► utils
 ▼ geometryXYVxVy
 ► geometry
 ► initialization
 ► poisson
 ► time_integration
 ► vlasov
 ▼ interpolation
 iinterpolator.hpp
 Lagrange.hpp
 Lagrange_interpolator.hpp
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 ▼ io
 input.hpp
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 ▼ multipatch
 ► interfaces
 ▼ paraconfpp
 paraconfpp.hpp
 ▼ pde_solvers
 fft_poisson_solver.hpp
 ipoisson_solver.hpp
 ▼ quadrature
 compute_norms.hppFile providing the L1 and the L2 norms
 neumann_spline_quadrature.hppFile providing quadrature coefficients via a spline quadrature
 quadrature.hpp
 quadrature_coeffs_nd.hppFile providing helper functions for defining multi-dimensional quadrature methods
 simpson_quadrature.hpp
 spline_quadrature.hppFile providing quadrature coefficients via a spline quadrature
 trapezoid_quadrature.hppFile providing quadrature coefficients via the trapezoidal method
 ▼ speciesinfo
 moments.hpp
 species_info.hpp
 species_init.hpp
 ▼ timestepper
 crank_nicolson.hpp
 euler.hpp
 itimestepper.hpp
 rk2.hpp
 rk3.hpp
 rk4.hpp
 ▼ utils
 assert.hpp
 ddc_helper.hpp
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 preprocessor.hpp
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 utils_tools.hppFile Describing useful functions
 ▼ tests
 ▼ geometryRTheta
 ► 2d_spline_interpolator
 ► advection_2d_rp
 ► advection_field_rp
 ► polar_poisson
 ▼ vendor
 ▼ sll
 ► include
 ► tests
 bsl_advection_1d.hpp
 bsl_advection_vx.hpp
 bsl_advection_x.hpp
 iadvectionvx.hpp
 iadvectionx.hpp
 nulladvectionvx.hpp
 ▼ collision
 CollisionSpVparMu.hpp
 koliop_interface.hpp
 ▼ data_types
 deriv_details.hpp
 derivative_field.hpp
 derivative_field_common.hpp
 derivative_field_span.hpp
 discrete_subdomain.hpp
 vector_field.hpp
 vector_field_common.hpp
 vector_field_span.hpp
 ▼ geometry5D
 ► geometry
 ▼ geometryRTheta
 ► advection
 ► advection_field
 ► geometry
 ► initialization
 ► interpolation
 ► poisson
 ► time_solver
 ▼ geometryXVx
 ► boltzmann
 ► geometry
 ► geometryMX
 ► initialization
 ► poisson
 ► rhs
 ► time_integration
 ► time_integration_hybrid
 ► utils
 ▼ geometryXYVxVy
 ► geometry
 ► initialization
 ► poisson
 ► time_integration
 ► vlasov
 ▼ interpolation
 iinterpolator.hpp
 Lagrange.hpp
 Lagrange_interpolator.hpp
 spline_interpolator.hpp
 ▼ io
 input.hpp
 output.hpp
 ▼ multipatch
 ► interfaces
 ▼ paraconfpp
 paraconfpp.hpp
 ▼ pde_solvers
 fft_poisson_solver.hpp
 ipoisson_solver.hpp
 ▼ quadrature
 compute_norms.hppFile providing the L1 and the L2 norms
 neumann_spline_quadrature.hppFile providing quadrature coefficients via a spline quadrature
 quadrature.hpp
 quadrature_coeffs_nd.hppFile providing helper functions for defining multi-dimensional quadrature methods
 simpson_quadrature.hpp
 spline_quadrature.hppFile providing quadrature coefficients via a spline quadrature
 trapezoid_quadrature.hppFile providing quadrature coefficients via the trapezoidal method
 ▼ speciesinfo
 moments.hpp
 species_info.hpp
 species_init.hpp
 ▼ timestepper
 crank_nicolson.hpp
 euler.hpp
 itimestepper.hpp
 rk2.hpp
 rk3.hpp
 rk4.hpp
 ▼ utils
 assert.hpp
 ddc_helper.hpp
 directional_tag.hpp
 preprocessor.hpp
 transpose.hpp
 utils_tools.hppFile Describing useful functions
 ▼ tests
 ▼ geometryRTheta
 ► 2d_spline_interpolator
 ► advection_2d_rp
 ► advection_field_rp
 ► polar_poisson
 ▼ vendor
 ▼ sll
 ► include
 ► tests
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"src_advection.html#src_advection__Velocity_advection", null ], + [ "1D advection with a given advection field", "src_advection.html#src_advection__1D_advection_with_a_given_advection_field", null ] ] ], [ "Geometry (r, theta)", "src_geometryRTheta.html", "src_geometryRTheta" ], [ "Geometry (x, v_x)", "src_geometryXVx.html", "src_geometryXVx" ], diff --git a/src_advection.html b/src_advection.html index c0c112ccb..3abeda8c2 100644 --- a/src_advection.html +++ b/src_advection.html @@ -117,7 +117,72 @@

\[ \frac{df_s}{dt}= q_s \sqrt{\frac{m_e}{m_s}} E \frac{\partial f_s}{\partial v} \]

- +

+1D advection with a given advection field

+

The purpose of the BslAdvection1D operator is an advection along a given direction of the phase space. The advection field is given as input. The dynamics of the motion are governed by the following equation.

+\[ \partial_t f(t,x) + A\partial_{x_i}(x')f(t,x) = 0, \qquad x \in \Omega, x' \in \Omega', \] +

+

with

+

+Example of use

+

Here are some examples of equation types the BslAdvection1D operator can solve:

+

+Parameters

+

The operator takes as templated parameters:

+

Remark/Warning: the BslAdvection1D operator is built with builder and evaluator for the advection field and interpolator for the function we want to advect. Theses operators have to be defined on the same domain as the advection field and function. For instance, if the advection field and/or the function are defined on the species dimension, then the interpolators have to contain the species dimension in its batched dimensions (see tests in the tests/advection/ folder).

+

Remark/Warning: The advection field need to use interpolation on B-splines. So we cannot use other type of interpolator for the advection field. However there is no constraint on the interpolator of the advected function.

+ diff --git a/src_geometryRTheta.js b/src_geometryRTheta.js index dce4646ea..f5c27f28f 100644 --- a/src_geometryRTheta.js +++ b/src_geometryRTheta.js @@ -3,17 +3,36 @@ var src_geometryRTheta = [ "Advection operator", "src_geometryRTheta_advection.html", [ [ "Studied equation", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Studied_equation", null ], [ "Backward Semi-Lagrangian method", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Backward_Semi-Lagrangian_method", null ], - [ "Time integration methods", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Time_integration_methods", null ], + [ "Time integration methods", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Time_integration_methods", [ + [ "Example of use", "src_advection.html#autotoc_md31", null ], + [ "Parameters", "src_advection.html#autotoc_md32", [ + [ "Field setup", "simulations_geometryRTheta_diocotron.html#autotoc_md20", null ], + [ "General case", "simulations_geometryRTheta_diocotron.html#autotoc_md21", null ], + [ "Simplified case", "simulations_geometryRTheta_diocotron.html#autotoc_md22", null ], + [ "Predictor-corrector", "simulations_geometryRTheta_diocotron.html#autotoc_md23", null ], + [ "Recommended parameters:", "simulations_geometryRTheta_diocotron.html#autotoc_md24", null ], + [ "Executables:", "simulations_geometryRTheta_diocotron.html#autotoc_md25", null ], + [ "Field setup", "simulations_geometryRTheta_vortex_merger.html#autotoc_md26", null ], + [ "General case", "simulations_geometryRTheta_vortex_merger.html#autotoc_md27", null ], + [ "Simplified case", "simulations_geometryRTheta_vortex_merger.html#autotoc_md28", null ], + [ "Recommended parameters:", "simulations_geometryRTheta_vortex_merger.html#autotoc_md29", null ], + [ "Executables:", "simulations_geometryRTheta_vortex_merger.html#autotoc_md30", null ], + [ "Explicit Euler method", "src_geometryRTheta_advection.html#autotoc_md33", null ], + [ "Crank-Nicolson method", "src_geometryRTheta_advection.html#autotoc_md34", null ], + [ "RK3 method", "src_geometryRTheta_advection.html#autotoc_md35", null ], + [ "RK4 method", "src_geometryRTheta_advection.html#autotoc_md36", null ] + ] ] + ] ], [ "Advection domain", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Advection_domain", null ], [ "Advection Field", "src_geometryRTheta_advection.html#src_geometryRTheta_advection__Advection_Field", null ], - [ "Unit tests", "src_geometryRTheta_advection.html#autotoc_md35", null ], - [ "References", "src_geometryRTheta_advection.html#autotoc_md36", null ], - [ "Contents", "src_geometryRTheta_advection.html#autotoc_md37", null ] + [ "Unit tests", "src_geometryRTheta_advection.html#autotoc_md37", null ], + [ "References", "src_geometryRTheta_advection.html#autotoc_md38", null ], + [ "Contents", "src_geometryRTheta_advection.html#autotoc_md39", null ] ] ], [ "Advection Field finder", "src_geometryRTheta_advection_field.html", [ [ "Guiding center case", "src_geometryRTheta_advection_field.html#src_geometryRTheta_advection_field__Guiding_center_case", null ], - [ "References", "src_geometryRTheta_advection_field.html#autotoc_md42", null ], - [ "Contents", "src_geometryRTheta_advection_field.html#autotoc_md43", null ] + [ "References", "src_geometryRTheta_advection_field.html#autotoc_md44", null ], + [ "Contents", "src_geometryRTheta_advection_field.html#autotoc_md45", null ] ] ], [ "Initialization", "src_geometryRTheta_initialization.html", [ [ "Diocotron instability", "src_geometryRTheta_initialization.html#src_geometryRTheta_initialization__Diocotron_instability", null ], diff --git a/src_geometryRTheta_advection.html b/src_geometryRTheta_advection.html index 8a57493ed..e1a673254 100644 --- a/src_geometryRTheta_advection.html +++ b/src_geometryRTheta_advection.html @@ -132,41 +132,41 @@

+

Explicit Euler method

-

+

Crank-Nicolson method

-

+

RK3 method

-

+

RK4 method